##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921691_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3028891 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.313460603237292 31.0 31.0 34.0 26.0 34.0 2 30.367895708363225 31.0 31.0 34.0 26.0 34.0 3 30.42577695928972 33.0 31.0 34.0 26.0 34.0 4 33.886304921504276 37.0 35.0 37.0 30.0 37.0 5 33.88969064915179 37.0 35.0 37.0 30.0 37.0 6 33.932204559358524 37.0 35.0 37.0 30.0 37.0 7 33.84529948420065 37.0 35.0 37.0 29.0 37.0 8 33.81989414607525 37.0 35.0 37.0 29.0 37.0 9 35.36259475827951 39.0 36.0 39.0 29.0 39.0 10-11 35.255819209076854 39.0 35.0 39.0 29.0 39.0 12-13 35.1439592907107 39.0 35.0 39.0 28.0 39.0 14-15 36.26193960099587 40.0 36.0 41.0 27.5 41.0 16-17 36.19817814507026 40.0 36.0 41.0 27.0 41.0 18-19 36.173082986479216 40.0 36.5 41.0 27.0 41.0 20-21 36.10057278390012 40.0 36.0 41.0 27.0 41.0 22-23 36.00401830240837 40.0 36.0 41.0 27.0 41.0 24-25 35.88663804673064 40.0 36.0 41.0 27.0 41.0 26-27 35.73509231596647 40.0 36.0 41.0 27.0 41.0 28-29 35.598655250387026 40.0 36.0 41.0 26.0 41.0 30-31 35.441240374777436 40.0 35.5 41.0 25.0 41.0 32-33 35.25730457121105 39.0 35.0 41.0 25.0 41.0 34-35 35.083677656277494 39.0 35.0 41.0 24.0 41.0 36-37 35.044193402799905 39.0 35.0 41.0 24.0 41.0 38-39 35.2142185043965 39.5 35.0 41.0 24.5 41.0 40-41 35.27208027624633 40.0 35.0 41.0 24.0 41.0 42-43 35.111506653755455 40.0 35.0 41.0 24.0 41.0 44-45 34.987517378472845 40.0 35.0 41.0 23.0 41.0 46-47 34.821444713593195 39.5 35.0 41.0 22.5 41.0 48-49 34.65331601566382 39.0 35.0 41.0 21.0 41.0 50-51 32.969064254870844 37.0 32.5 39.5 17.0 40.0 52-53 33.0878423819147 37.5 32.5 39.5 16.5 40.0 54-55 33.99261495379002 38.5 34.0 40.5 18.0 41.0 56-57 34.019934028659335 39.0 34.0 41.0 17.5 41.0 58-59 33.83455149095825 38.0 34.0 41.0 15.5 41.0 60-61 33.58102619077411 38.0 34.0 40.0 13.0 41.0 62-63 33.29259009320573 37.0 33.0 40.0 11.5 41.0 64-65 33.0124165907588 37.0 33.0 40.0 8.0 41.0 66-67 32.6813087694473 36.0 33.0 39.5 7.0 41.0 68-69 32.329874036404746 36.0 33.0 39.0 4.0 41.0 70-71 31.928386495255193 35.0 32.0 39.0 2.0 40.5 72-73 31.57408272532752 35.0 32.0 37.5 2.0 40.0 74-75 31.181768673748905 35.0 32.0 37.0 2.0 39.0 76-77 30.816588645811287 35.0 31.5 36.5 2.0 39.0 78-79 30.476724649384874 35.0 31.0 36.0 2.0 38.5 80-81 30.164014981060724 35.0 31.0 36.0 2.0 37.0 82-83 29.85645175082233 35.0 31.0 35.0 2.0 37.0 84-85 29.59330197091939 35.0 31.0 35.0 2.0 36.5 86-87 29.362201379977027 35.0 31.0 35.0 2.0 36.0 88-89 29.14236514288563 35.0 30.0 35.0 2.0 36.0 90-91 28.915094336507984 34.0 30.0 35.0 2.0 35.5 92-93 28.72265624613101 34.0 30.0 35.0 2.0 35.0 94-95 28.490990266734592 34.0 30.0 35.0 2.0 35.0 96-97 28.25444642940271 34.0 29.5 35.0 2.0 35.0 98-99 27.989021889529866 34.0 29.0 35.0 2.0 35.0 100-101 26.92136891027112 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 106096.0 3 18342.0 4 12481.0 5 9627.0 6 8583.0 7 9024.0 8 9596.0 9 10097.0 10 11092.0 11 11865.0 12 12027.0 13 12124.0 14 12718.0 15 13787.0 16 14089.0 17 14673.0 18 13592.0 19 13011.0 20 12940.0 21 13668.0 22 14833.0 23 17257.0 24 19707.0 25 23422.0 26 27781.0 27 33261.0 28 38679.0 29 45797.0 30 55000.0 31 66371.0 32 83500.0 33 107107.0 34 150817.0 35 215699.0 36 349989.0 37 632760.0 38 681525.0 39 125936.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.61803135399331 18.07449562934926 12.831465514108901 24.476007502548526 2 15.972084097927022 19.983466934860914 38.78137036775166 25.2630785994604 3 18.819893958096003 24.62497455998689 29.531593192384648 27.023538289532457 4 13.355255376495068 15.97807046814674 36.99108559376183 33.675588561596356 5 14.060307686615166 37.80051676445063 34.11867742394804 14.020498124986167 6 32.72007462255351 35.46212327579802 17.655068802984903 14.162733298663563 7 28.629378701956696 32.25758519329588 21.26499026239687 17.848045842350547 8 27.060862306263754 33.987552272793316 20.411749788002947 18.539835632939983 9 27.48319399870571 15.213954594080588 19.464122984270375 37.838728422943326 10-11 25.62467919291252 25.231084289570283 27.990277017178006 21.153959500339194 12-13 26.180986424441322 22.810419194640247 27.69010099895994 23.31849338195849 14-15 23.53080285394002 24.224222951348132 25.11228091267422 27.13269328203763 16-17 23.559934248059186 27.200332887776696 25.894095122351946 23.345637741812176 18-19 23.58511420734219 26.711269343762822 27.127007017286083 22.576609431608908 20-21 24.214945365788097 25.912131867747217 26.96449614161719 22.9084266248475 22-23 24.150480446654296 25.631329874555593 26.665363170837274 23.552826507952837 24-25 23.822798894470555 25.846514902139972 26.663838496395403 23.666847706994073 26-27 23.490082261733715 26.12466362707838 26.652937114733504 23.7323169964544 28-29 23.64567714574302 26.40002139642726 26.452389812527016 23.50191164530271 30-31 24.108178394533724 26.045798718819285 26.256214020345485 23.589808866301507 32-33 23.816647100611018 26.104942846260993 26.12830324739292 23.950106805735068 34-35 24.1118560506509 26.246940964073413 26.30515014203964 23.336052843236047 36-37 24.21074578258837 25.958888325422798 26.34875293508607 23.48161295690277 38-39 24.01572255404009 26.15439600894092 26.196195155128983 23.63368628189001 40-41 24.115676113090316 25.964709088769066 26.272482310550842 23.647132487589776 42-43 23.91160652461124 25.933501381975336 26.143449122542865 24.011442970870558 44-45 23.743331447152674 25.923515898088024 26.44282482487218 23.890327829887127 46-47 23.986551702747967 25.904844612617083 26.076347621115314 24.032256063519633 48-49 23.696778271617355 26.029363814890612 26.20155790239181 24.07230001110022 50-51 23.85507973720937 26.021430103875314 26.314081351819834 23.809408807095487 52-53 24.034603776175537 25.867670911769302 26.30499064930467 23.792734662750487 54-55 23.424525628633972 25.755329301160867 26.651724811590533 24.168420258614628 56-57 23.544597708146682 25.89238095742245 26.375370053981236 24.187651280449636 58-59 23.696122559756102 25.763595476173577 26.45809127559815 24.08219068847217 60-61 23.788947916132415 25.85248226011657 26.609312260000763 23.749257563750252 62-63 23.714659568942274 25.71264803238309 26.672197289388315 23.900495109286318 64-65 23.41721603650423 25.53643375767646 26.64294831457105 24.40340189124826 66-67 23.470123021393515 25.714531478225194 26.47530556846735 24.340039931913935 68-69 23.565928555584613 25.66698872082635 26.521234484705904 24.245848238883134 70-71 23.453363135691475 25.513797925059883 26.499945253548844 24.532893685699797 72-73 23.414494228464218 25.814633310384593 26.375559561567734 24.39531289958345 74-75 23.44123398143417 25.871889187940532 26.413341566581046 24.27353526404426 76-77 23.460599729134096 25.406480800873865 26.522611745417805 24.61030772457423 78-79 23.407609382558213 25.495405267514876 26.603226470317704 24.493758879609207 80-81 23.61932368588463 25.656886029895343 26.36779595257181 24.355994331648215 82-83 23.631756630993085 25.628429449608753 26.522946549186777 24.216867370211386 84-85 23.526287873699353 25.735735209110832 26.431227208611862 24.30674970857795 86-87 23.41425549662709 25.854843804631813 26.372789555105435 24.358111143635668 88-89 23.38241360156975 25.50607046293764 26.52942127376392 24.582094661728693 90-91 23.454002860988872 25.410578378105576 26.66899980391719 24.466418956988367 92-93 23.711698254069475 25.18638558726228 26.71772738809998 24.38418877056827 94-95 23.532743525664777 25.1586555270931 26.761881769634805 24.54671917760732 96-97 23.435909579602374 25.017652606305756 26.820096650398302 24.726341163693565 98-99 23.265769772042272 24.936439398389496 26.782853157429248 25.014937672138988 100-101 23.43528282606807 24.968488463972925 26.8694569358889 24.726771774070105 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 64.0 1 59.0 2 109.0 3 175.0 4 151.0 5 160.0 6 269.0 7 506.0 8 782.0 9 860.0 10 716.5 11 656.0 12 734.0 13 793.5 14 873.0 15 947.0 16 1079.0 17 1217.0 18 1288.5 19 1410.0 20 1551.0 21 1639.5 22 1822.0 23 2049.5 24 2295.0 25 2759.5 26 3697.0 27 5023.0 28 6966.0 29 10183.0 30 14737.5 31 20630.0 32 28703.5 33 35180.0 34 40252.5 35 47370.0 36 56110.0 37 65175.0 38 72829.0 39 79938.5 40 85467.0 41 90355.5 42 95746.0 43 101147.0 44 107144.0 45 114517.5 46 120197.5 47 124067.0 48 128791.5 49 131873.5 50 132451.5 51 130946.5 52 128307.5 53 126368.0 54 124004.5 55 118698.0 56 109728.5 57 98382.5 58 88216.5 59 76682.5 60 63006.5 61 52084.0 62 43506.0 63 33692.0 64 24012.5 65 17501.0 66 12807.0 67 9518.5 68 7221.0 69 5350.5 70 3977.5 71 2902.5 72 2108.0 73 1579.0 74 1229.0 75 927.0 76 681.5 77 458.0 78 315.5 79 227.0 80 158.0 81 128.0 82 103.5 83 81.0 84 63.0 85 54.5 86 58.0 87 49.0 88 43.0 89 44.0 90 37.0 91 27.0 92 28.0 93 23.0 94 15.0 95 10.5 96 8.5 97 10.5 98 9.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05457443004716908 2 0.07359129133402291 3 0.07141227597823757 4 0.06949738369588077 5 0.06537046067356006 6 0.010432861400426756 7 0.014031538275890418 8 0.01805941514567543 9 0.00696624606167736 10-11 0.013090599826801294 12-13 0.02283013815947817 14-15 0.04017972254531444 16-17 0.02784847655462016 18-19 0.009855092177301857 20-21 0.020287953577728612 22-23 0.03748896873476134 24-25 0.03369219955422628 26-27 0.020799692032496382 28-29 0.011489353694140858 30-31 0.011769984459658666 32-33 0.008633522962694927 34-35 0.005249446084391944 36-37 6.27292299392748E-4 38-39 0.003994861485606448 40-41 0.0012380769066962132 42-43 0.22940739696476367 44-45 0.1990002281363047 46-47 0.20481093575173223 48-49 0.2122724125760881 50-51 0.2040515819156252 52-53 0.2109187818247669 54-55 0.20751819725437462 56-57 0.20994482799149922 58-59 0.21877644325926554 60-61 0.22272178166860412 62-63 0.2088553203136065 64-65 0.20921848953957076 66-67 0.20621408957932127 68-69 0.20164145887058993 70-71 0.1936022128231092 72-73 0.20509156651725002 74-75 0.2042826896048752 76-77 0.19786119738214414 78-79 0.21516125869171257 80-81 0.2261058585469071 82-83 0.2249503201006573 84-85 0.2192881817140333 86-87 0.23911391991326197 88-89 0.23125625847876335 90-91 0.23799139685119075 92-93 0.233220673837388 94-95 0.23676982763658383 96-97 0.24373607369826117 98-99 0.2366707814840481 100-101 0.2436040121615469 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3028891.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.3419431000882 #Duplication Level Percentage of deduplicated Percentage of total 1 77.34310856669022 44.35004130615095 2 12.268739653267275 14.070267422148957 3 4.218990411248645 7.257753243049125 4 1.9477694263205534 4.467555344646584 5 1.0642635265703855 3.051346929204913 6 0.6709464652354077 2.3084024419640436 7 0.4675646965196971 1.8767747756409734 8 0.3204891019351437 1.4701974277890701 9 0.24986327226076957 1.2894880986701007 >10 1.3555444716984733 13.81079577540349 >50 0.06710780232672652 2.5923328836647483 >100 0.023478401923820613 2.2593314189945213 >500 0.0012113049751012906 0.48250560895027717 >1k 9.228990277830337E-4 0.7132073237222072 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3015384178565684E-5 2 0.0 0.0 0.0 0.0 3.3015384178565684E-5 3 0.0 0.0 0.0 0.0 3.3015384178565684E-5 4 0.0 0.0 0.0 0.0 3.3015384178565684E-5 5 0.0 0.0 0.0 0.0 3.3015384178565684E-5 6 0.0 0.0 0.0 0.0 3.3015384178565684E-5 7 0.0 0.0 0.0 0.0 3.3015384178565684E-5 8 0.0 0.0 0.0 0.0 6.603076835713137E-5 9 0.0 0.0 0.0 0.0 6.603076835713137E-5 10-11 0.0 0.0 0.0 3.3015384178565684E-5 6.603076835713137E-5 12-13 0.0 0.0 0.0 3.3015384178565684E-5 9.904615253569706E-5 14-15 0.0 0.0 0.0 3.3015384178565684E-5 2.1459999716067694E-4 16-17 0.0 0.0 0.0 4.952307626784853E-5 2.6412307342852547E-4 18-19 0.0 0.0 0.0 9.904615253569706E-5 2.971384576070912E-4 20-21 0.0 0.0 0.0 1.485692288035456E-4 3.6316922596422253E-4 22-23 0.0 0.0 0.0 2.8063076551780835E-4 3.9618461014278824E-4 24-25 0.0 0.0 0.0 5.777692231248995E-4 4.2919999432135394E-4 26-27 0.0 0.0 0.0 0.001039984601624819 4.4570768641063677E-4 28-29 0.0 0.0 0.0 0.0038132768726243365 4.7872307058920247E-4 30-31 0.0 0.0 0.0 0.01247981521949783 4.952307626784853E-4 32-33 0.0 0.0 0.0 0.03780261488445771 4.952307626784853E-4 34-35 0.0 0.0 0.0 0.0728319374979159 5.612615310356167E-4 36-37 0.0 1.6507692089282842E-5 0.0 0.13387738284408385 5.612615310356167E-4 38-39 0.0 3.3015384178565684E-5 0.0 0.23675331994449453 5.612615310356167E-4 40-41 0.0 3.3015384178565684E-5 0.0 0.35238970302992084 5.612615310356167E-4 42-43 0.0 3.3015384178565684E-5 0.0 0.4712615937648466 5.612615310356167E-4 44-45 0.0 3.3015384178565684E-5 0.0 0.6229837917574452 5.612615310356167E-4 46-47 0.0 3.3015384178565684E-5 0.0 0.8011182970928964 5.612615310356167E-4 48-49 0.0 3.3015384178565684E-5 0.0 0.9827854485354541 5.942769152141824E-4 50-51 0.0 3.3015384178565684E-5 0.0 1.1783685844092773 6.603076835713138E-4 52-53 0.0 3.3015384178565684E-5 0.0 1.3796138586697244 6.933230677498794E-4 54-55 0.0 3.3015384178565684E-5 0.0 1.6090872864028452 7.263384519284451E-4 56-57 0.0 3.3015384178565684E-5 0.0 1.8724014829189959 7.263384519284451E-4 58-59 0.0 3.3015384178565684E-5 0.0 2.15151354076459 7.263384519284451E-4 60-61 0.0 3.3015384178565684E-5 0.0 2.447001229162753 7.758615281962936E-4 62-63 0.0 3.3015384178565684E-5 0.0 2.7527567020404495 8.253846044641421E-4 64-65 0.0 3.3015384178565684E-5 0.0 3.082646420752678 8.253846044641421E-4 66-67 0.0 3.3015384178565684E-5 0.0 3.4559678773518097 8.41892296553425E-4 68-69 0.0 3.3015384178565684E-5 0.0 3.860043164313275 8.583999886427079E-4 70-71 0.0 3.3015384178565684E-5 0.0 4.285000681767683 8.749076807319907E-4 72-73 0.0 3.3015384178565684E-5 0.0 4.727852537446874 9.904615253569706E-4 74-75 0.0 3.3015384178565684E-5 0.0 5.18739366982833 9.904615253569706E-4 76-77 0.0 3.3015384178565684E-5 0.0 5.698818478446402 9.904615253569706E-4 78-79 0.0 3.3015384178565684E-5 0.0 6.2612190402361785 0.0010069692174462534 80-81 0.0 3.3015384178565684E-5 0.0 6.850708724744469 0.0010564922937141019 82-83 0.0 3.3015384178565684E-5 0.0 7.449970962969616 0.0010895076778926675 84-85 0.0 3.3015384178565684E-5 0.0 8.068728785552203 0.0010895076778926675 86-87 0.0 3.3015384178565684E-5 0.0 8.72528922301925 0.0011225230620712334 88-89 0.0 3.3015384178565684E-5 0.0 9.444347782736322 0.0011225230620712334 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2830 0.0 57.696617 1 GTATCAA 5730 0.0 44.317726 1 TCAACGC 7005 0.0 35.71457 4 CAACGCA 7155 0.0 34.829685 5 ATCAACG 7275 0.0 34.51902 3 TATCAAC 7530 0.0 33.414196 2 AACGCAG 7565 0.0 33.235435 6 GTACATG 11350 0.0 30.110294 1 TACATGG 11835 0.0 28.399788 2 ACGCAGA 8850 0.0 27.772448 7 CGCAGAG 9075 0.0 26.823334 8 ACATGGG 12305 0.0 26.542545 3 CATGGGG 9725 0.0 24.163425 4 GCAGAGT 10140 0.0 22.977728 9 ATGGGGG 5995 0.0 20.982468 5 AGAGTAC 8825 0.0 19.680218 10-11 CAGAGTA 9540 0.0 19.349277 10-11 ACGTATA 230 2.0711923E-6 18.576538 2 GAGTACA 8530 0.0 18.084757 1 GTATAGA 895 0.0 18.031597 1 >>END_MODULE