##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921691_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3028891 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36281959304577 33.0 31.0 34.0 28.0 34.0 2 31.502452877967546 34.0 31.0 34.0 28.0 34.0 3 31.57387340779183 34.0 31.0 34.0 28.0 34.0 4 35.05242380792178 37.0 35.0 37.0 32.0 37.0 5 34.8017875189302 37.0 35.0 37.0 32.0 37.0 6 34.773387685459795 37.0 35.0 37.0 32.0 37.0 7 34.662869017075884 37.0 35.0 37.0 32.0 37.0 8 34.60581116983081 37.0 35.0 37.0 32.0 37.0 9 36.185942973847524 39.0 37.0 39.0 32.0 39.0 10-11 36.08193824076205 39.0 37.0 39.0 32.0 39.0 12-13 36.002483747351754 39.0 37.0 39.0 31.0 39.0 14-15 37.22776933867874 40.0 38.0 41.0 31.0 41.0 16-17 37.19661965386011 40.0 38.0 41.0 31.0 41.0 18-19 37.165044895970176 40.0 38.0 41.0 31.0 41.0 20-21 37.1087376534844 40.0 38.0 41.0 31.0 41.0 22-23 37.0243970482926 40.0 37.5 41.0 31.0 41.0 24-25 36.93115945737235 40.0 37.0 41.0 30.5 41.0 26-27 36.80137779801254 40.0 37.0 41.0 30.0 41.0 28-29 36.683982850488846 40.0 37.0 41.0 30.0 41.0 30-31 36.517774162226374 40.0 37.0 41.0 30.0 41.0 32-33 36.44828915929956 40.0 36.5 41.0 30.0 41.0 34-35 36.560913879040214 40.0 37.0 41.0 30.0 41.0 36-37 36.55009341702953 40.0 37.0 41.0 30.0 41.0 38-39 36.43745450067368 40.0 37.0 41.0 30.0 41.0 40-41 36.35255560533542 40.0 36.5 41.0 29.5 41.0 42-43 36.21927514063728 40.0 36.0 41.0 29.0 41.0 44-45 36.083061919362564 40.0 36.0 41.0 28.0 41.0 46-47 35.915233331275374 40.0 36.0 41.0 28.0 41.0 48-49 35.76580174063709 40.0 35.0 41.0 27.0 41.0 50-51 35.609394494552625 39.5 35.0 41.0 27.0 41.0 52-53 35.43683397652804 39.0 35.0 41.0 26.5 41.0 54-55 35.220543096466656 39.0 35.0 41.0 26.0 41.0 56-57 34.99434248376716 39.0 35.0 41.0 26.0 41.0 58-59 34.75330921449468 38.5 35.0 40.5 26.0 41.0 60-61 34.47561335155342 38.0 34.0 40.0 25.0 41.0 62-63 34.17418933200304 37.5 34.0 40.0 24.0 41.0 64-65 33.84249697331465 37.0 34.0 40.0 23.0 41.0 66-67 33.49671381373578 36.0 34.0 39.0 22.5 41.0 68-69 33.135753482050035 36.0 33.5 39.0 22.0 41.0 70-71 32.73750491516532 35.0 33.0 39.0 21.5 40.0 72-73 32.38069725850154 35.0 33.0 37.5 20.0 40.0 74-75 31.976793816614727 35.0 33.0 37.0 19.5 39.0 76-77 29.279446668764244 33.0 29.0 34.5 12.0 36.5 78-79 30.840881695643716 34.5 31.5 36.0 14.0 37.5 80-81 31.015296522720693 35.0 32.0 35.5 15.5 37.0 82-83 30.838898461516113 35.0 32.0 35.0 12.5 37.0 84-85 30.63694170572662 35.0 32.0 35.0 9.5 36.5 86-87 30.427694988033572 35.0 32.0 35.0 7.0 36.0 88-89 30.155263923330352 35.0 31.5 35.0 2.0 36.0 90-91 29.950882847880628 34.5 31.0 35.0 2.0 35.0 92-93 29.786306275135026 34.0 31.0 35.0 2.0 35.0 94-95 29.67485393168655 34.0 31.0 35.0 2.0 35.0 96-97 29.47022309485551 34.0 31.0 35.0 2.0 35.0 98-99 29.2646174788066 34.0 31.0 35.0 2.0 35.0 100-101 28.150473556162964 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57360.0 3 19648.0 4 10813.0 5 7685.0 6 6618.0 7 6795.0 8 6899.0 9 7521.0 10 8302.0 11 9056.0 12 9741.0 13 10486.0 14 11348.0 15 12287.0 16 13402.0 17 14587.0 18 13720.0 19 12229.0 20 11510.0 21 11517.0 22 12000.0 23 13461.0 24 15895.0 25 18941.0 26 22604.0 27 27143.0 28 32578.0 29 39680.0 30 48016.0 31 59087.0 32 75595.0 33 99919.0 34 144508.0 35 213879.0 36 366876.0 37 710405.0 38 765209.0 39 101566.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.117584731750036 19.730638884406076 13.534360970086274 25.617415413757616 2 15.064954616948024 21.35743726072045 37.56043480040834 26.01717332192319 3 17.57539616894976 25.546949731044595 29.442650968163512 27.435003131842134 4 12.926498852148166 17.115786602903356 36.08520616594375 33.87250837900473 5 13.846985534316206 38.065414585625724 34.197452422813804 13.890147457244268 6 32.65759452568035 36.05547086947349 17.39584189686259 13.89109270798357 7 28.43905574680634 32.393506402178225 21.334640302341683 17.832797548673756 8 27.04293419604733 34.47889012843315 20.122282379920573 18.35589329559895 9 27.247680585191468 15.221356741696379 19.433066051611664 38.097896621500496 10-11 25.538992376871285 25.55816704688446 27.942845279901462 20.95999529634279 12-13 26.11801768741644 22.96272231634403 27.761382809764612 23.157877186474916 14-15 23.40385033178967 24.4264585175417 25.116187466281204 27.05350368438743 16-17 23.454628023033518 27.454260891900844 25.855886833809276 23.23522425125636 18-19 23.523180509028432 26.929607076748802 27.13118533330406 22.416027080918706 20-21 24.106737680732852 26.02241056811858 26.991992263816023 22.87885948733254 22-23 23.968723205952276 25.78016178198555 26.746208430742474 23.5049065813197 24-25 23.693174680446695 26.00990829437912 26.691943365799165 23.60497365937502 26-27 23.410313829168178 26.28957531825749 26.721974645053027 23.578136207521304 28-29 23.518154808531868 26.55851961004591 26.484560864168326 23.4387647172539 30-31 23.99311378955881 26.151419360441636 26.32017345298842 23.53529339701113 32-33 23.762723270153664 26.26412164942054 26.14820640936488 23.824948671060913 34-35 24.023756598871802 26.35806003404932 26.383319663416266 23.234863703662615 36-37 24.110604467543034 26.069741823088123 26.455873887517868 23.36377982185098 38-39 23.96577624146139 26.25711069071508 26.22320387996923 23.5539091878543 40-41 24.067018314940913 26.07562969165183 26.278483378147797 23.578868615259456 42-43 23.884878285222598 26.03974129625264 26.13901034062176 23.936370077903003 44-45 23.70980778526468 26.035693248843728 26.385216608071595 23.869282357819998 46-47 23.83644253095097 26.050005241379992 26.115592651502705 23.99795957616633 48-49 23.58624975195047 26.191653054897117 26.208459339192753 24.01363785395966 50-51 23.815533575090207 26.157896500611383 26.185927399312035 23.84064252498638 52-53 23.98551256961222 26.005531834460964 26.19537396009849 23.813581635828328 54-55 23.35992213370294 25.90005254588355 26.53900586754112 24.201019452872387 56-57 23.514290591483856 25.982980653890763 26.305498352247568 24.19723040237781 58-59 23.585768547377583 25.893023718097098 26.380781965145832 24.140425769379487 60-61 23.70168510398323 26.027793245617616 26.407826101455566 23.862695548943595 62-63 23.610692141349087 25.909915639716054 26.468024640540456 24.011367578394402 64-65 23.240774396322987 25.743371686751665 26.483163893608776 24.532690023316576 66-67 23.353394894509975 25.987160292512495 26.232979937998348 24.426464874979185 68-69 23.44729070401776 25.847941703383377 26.279772163434927 24.424995429163932 70-71 23.361069124728466 25.73627045287476 26.22106036953523 24.681600052861544 72-73 23.32121919489859 26.041764714236127 26.037553829147715 24.599462261717573 74-75 23.25640339753243 26.12804153126734 25.9761466011466 24.63940847005363 76-77 23.268325943760935 25.673950677685863 26.16912951736112 24.888593861192078 78-79 23.198047120245846 25.8241747348247 26.180930509202653 24.796847635726795 80-81 23.414856306900766 26.04575667066592 25.861090641302713 24.6782963811306 82-83 23.315060920152888 25.99733757102728 26.003810357912087 24.68379115090774 84-85 23.21369968039298 26.096587681842454 25.885525820517646 24.804186817246922 86-87 23.075474493864125 26.262190763572658 25.80967120557296 24.85266353699026 88-89 22.996681590101627 25.932504969833314 25.908448443453334 25.162364996611718 90-91 22.992039886005923 25.918701400023707 26.01215111169393 25.07710760227644 92-93 23.18670219926055 25.752927351150834 25.98229261206682 25.07807783752179 94-95 22.945649254262353 25.727911625866724 26.000663347507754 25.325775772363173 96-97 22.729529379929037 25.621681540486712 26.100578205892543 25.54821087369171 98-99 22.50911026829379 25.637000689202626 26.010243119322844 25.84364592318073 100-101 22.534293113512284 25.723252229861256 25.993087232013863 25.749367424612597 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 75.0 1 68.5 2 102.5 3 150.0 4 134.0 5 149.5 6 242.5 7 468.0 8 689.5 9 704.5 10 598.5 11 489.0 12 475.5 13 531.0 14 585.0 15 640.5 16 684.5 17 753.5 18 852.0 19 964.5 20 1100.0 21 1224.0 22 1385.5 23 1658.5 24 2042.0 25 2633.5 26 3596.5 27 5070.5 28 7279.0 29 10680.0 30 15420.0 31 21403.5 32 29552.0 33 35815.5 34 40818.0 35 47595.0 36 56024.0 37 64934.0 38 72659.5 39 80312.0 40 85856.5 41 90186.5 42 95485.5 43 101470.0 44 107645.5 45 114918.5 46 120481.5 47 124918.0 48 130327.0 49 132746.0 50 133247.5 51 132373.0 52 129844.5 53 128144.0 54 125327.0 55 119531.5 56 110666.0 57 98548.5 58 87459.0 59 76057.5 60 62610.5 61 51568.0 62 42572.5 63 32546.0 64 22888.0 65 16360.5 66 11971.0 67 8907.5 68 6656.5 69 4830.0 70 3474.5 71 2507.0 72 1837.0 73 1384.0 74 1049.0 75 746.5 76 494.0 77 291.0 78 165.0 79 86.5 80 59.5 81 42.5 82 23.5 83 18.0 84 12.5 85 7.5 86 5.0 87 5.0 88 3.5 89 2.5 90 2.0 91 1.0 92 1.5 93 2.0 94 1.0 95 0.0 96 1.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1649118439719356 2 2.311076892499598E-4 3 0.010630953705498151 4 0.0062729229939274805 5 0.025058676591531357 6 0.0019148922823568097 7 0.0 8 0.0 9 6.603076835713137E-5 10-11 0.04818595320861662 12-13 4.787230705892024E-4 14-15 0.005447538389463338 16-17 1.6507692089282842E-5 18-19 0.0014031538275890416 20-21 2.4761538133924265E-4 22-23 0.0 24-25 4.787230705892024E-4 26-27 0.0030869384206958918 28-29 0.005794199923338278 30-31 0.017167999772854155 32-33 0.012710922908747788 34-35 0.011324276773248031 36-37 0.004440569172017085 38-39 3.3015384178565684E-5 40-41 0.0035326461071065285 42-43 0.008352892197177119 44-45 0.006437999914820309 46-47 0.003582169183374377 48-49 0.008650030654784209 50-51 0.002987892268160195 52-53 0.0019313999744460925 54-55 0.0036151845675529426 56-57 0.007263384519284451 58-59 0.014658830575283164 60-61 0.006784661448695248 62-63 0.020783184340407098 64-65 0.04016321485322516 66-67 0.06190384533481066 68-69 0.05102527624797327 70-71 0.069860552921845 72-73 0.03380775339885126 74-75 0.02677547656881677 76-77 0.22953945850147794 78-79 0.0855428604066637 80-81 0.06852342986261309 82-83 0.027369753484030958 84-85 0.0521477993100445 86-87 0.0680281990999346 88-89 0.2945137345648952 90-91 0.29994476526226926 92-93 0.05360047621390139 94-95 0.010317307555801777 96-97 0.01556675364019372 98-99 9.40938449089122E-4 100-101 9.904615253569706E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3028891.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.41941383918972 #Duplication Level Percentage of deduplicated Percentage of total 1 76.53536176254788 43.180802486132855 2 12.698584898512616 14.328934331225366 3 4.308286480865564 7.292129937052218 4 2.0475356746025626 4.6208305030362595 5 1.133972019850171 3.1989018334994332 6 0.7037841541436914 2.382425366765821 7 0.4718862526795763 1.8636482042467424 8 0.33763122913510407 1.5239164833286183 9 0.26564044853362 1.348855055842166 >10 1.4030257298136775 14.168174114680298 >50 0.06804263891648338 2.589397682677377 >100 0.024134310551590047 2.3298951745692027 >500 0.0011159332532589352 0.42617495714101106 >1k 9.984665942410567E-4 0.7459138698026072 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.3015384178565684E-5 0.0 4 0.0 0.0 0.0 3.3015384178565684E-5 0.0 5 0.0 0.0 0.0 3.3015384178565684E-5 0.0 6 0.0 0.0 0.0 3.3015384178565684E-5 0.0 7 0.0 0.0 0.0 3.3015384178565684E-5 0.0 8 0.0 0.0 0.0 3.3015384178565684E-5 0.0 9 0.0 0.0 0.0 3.3015384178565684E-5 0.0 10-11 0.0 0.0 0.0 6.603076835713137E-5 3.3015384178565684E-5 12-13 0.0 0.0 0.0 6.603076835713137E-5 3.3015384178565684E-5 14-15 0.0 0.0 0.0 6.603076835713137E-5 4.952307626784853E-5 16-17 0.0 0.0 0.0 8.25384604464142E-5 1.3206153671426274E-4 18-19 0.0 0.0 0.0 9.904615253569706E-5 1.6507692089282844E-4 20-21 0.0 0.0 0.0 1.485692288035456E-4 1.6507692089282844E-4 22-23 0.0 0.0 0.0 2.971384576070912E-4 1.815846129821113E-4 24-25 0.0 0.0 0.0 6.437999914820308E-4 2.311076892499598E-4 26-27 0.0 0.0 0.0 0.0011225230620712334 2.311076892499598E-4 28-29 0.0 0.0 0.0 0.004027876869785014 2.311076892499598E-4 30-31 0.0 0.0 0.0 0.013371230592319101 2.311076892499598E-4 32-33 0.0 0.0 0.0 0.03953592255383241 2.311076892499598E-4 34-35 0.0 0.0 0.0 0.07517602977459406 2.311076892499598E-4 36-37 0.0 0.0 0.0 0.13721193664611897 2.311076892499598E-4 38-39 0.0 0.0 0.0 0.2402694583595118 2.6412307342852547E-4 40-41 0.0 0.0 0.0 0.3566651952810451 2.6412307342852547E-4 42-43 0.0 0.0 0.0 0.47708880907236345 2.6412307342852547E-4 44-45 0.0 0.0 0.0 0.629157668598837 2.6412307342852547E-4 46-47 0.0 0.0 0.0 0.8082991431517343 2.6412307342852547E-4 48-49 0.0 0.0 0.0 0.9901313715151849 2.971384576070912E-4 50-51 0.0 0.0 0.0 1.1863087843042224 2.971384576070912E-4 52-53 0.0 0.0 0.0 1.3879667508669016 3.301538417856568E-4 54-55 0.0 0.0 0.0 1.6173246247553972 3.6316922596422253E-4 56-57 0.0 0.0 0.0 1.8810350058816907 3.6316922596422253E-4 58-59 0.0 0.0 0.0 2.1610549867921955 3.6316922596422253E-4 60-61 0.0 0.0 0.0 2.4570709213372153 3.6316922596422253E-4 62-63 0.0 0.0 0.0 2.763899394200716 3.9618461014278824E-4 64-65 0.0 0.0 0.0 3.09548940519814 3.9618461014278824E-4 66-67 0.0 0.0 0.0 3.4696032310175573 3.9618461014278824E-4 68-69 0.0 0.0 0.0 3.8746854871964693 3.9618461014278824E-4 70-71 0.0 0.0 0.0 4.3021851892326275 4.2919999432135394E-4 72-73 0.0 1.6507692089282842E-5 0.0 4.747661767954013 4.622153784999196E-4 74-75 0.0 3.3015384178565684E-5 0.0 5.211181254128986 4.7872307058920247E-4 76-77 0.0 3.3015384178565684E-5 0.0 5.725891093472826 4.952307626784853E-4 78-79 0.0 3.3015384178565684E-5 0.0 6.292319532132388 4.952307626784853E-4 80-81 0.0 3.3015384178565684E-5 0.0 6.886332324273141 5.117384547677681E-4 82-83 0.0 3.3015384178565684E-5 0.0 7.491702408571323 5.777692231248995E-4 84-85 0.0 3.3015384178565684E-5 0.0 8.115280477243981 5.942769152141824E-4 86-87 0.0 3.3015384178565684E-5 0.0 8.778031299244509 6.27292299392748E-4 88-89 0.0 3.3015384178565684E-5 0.0 9.504122135791615 6.603076835713138E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2550 0.0 57.42335 1 GTATCAA 5395 0.0 46.17616 1 TCAACGC 6760 0.0 35.45489 4 ATCAACG 7085 0.0 33.896626 3 CAACGCA 7130 0.0 33.774357 5 TATCAAC 7155 0.0 33.764004 2 AACGCAG 7675 0.0 31.3719 6 GTACATG 11285 0.0 29.82701 1 TACATGG 11720 0.0 28.388094 2 ACATGGG 11880 0.0 26.767275 3 ACGCAGA 9005 0.0 26.58019 7 CGCAGAG 9380 0.0 25.315031 8 CATGGGG 9285 0.0 25.097534 4 ATGGGGG 5710 0.0 23.207949 5 GCAGAGT 10415 0.0 21.660074 9 AGAGTAC 9170 0.0 19.26634 10-11 GTATATA 1025 0.0 18.089174 1 GAGTACA 8545 0.0 18.026478 1 GTATAGG 825 0.0 17.288021 1 CAGAGTA 9820 0.0 17.19308 10-11 >>END_MODULE