##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921690_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2676310 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.21318046115734 31.0 31.0 34.0 26.0 34.0 2 30.268413972970247 31.0 31.0 34.0 26.0 34.0 3 30.3270775806988 33.0 31.0 34.0 26.0 34.0 4 33.76594938553456 37.0 35.0 37.0 28.0 37.0 5 33.758321345434574 37.0 35.0 37.0 28.0 37.0 6 33.798969476630134 37.0 35.0 37.0 29.0 37.0 7 33.704000657621876 37.0 35.0 37.0 28.0 37.0 8 33.67476562879487 37.0 35.0 37.0 28.0 37.0 9 35.21632807858581 39.0 35.0 39.0 28.0 39.0 10-11 35.10996726836577 39.0 35.0 39.0 28.0 39.0 12-13 34.998725297144205 39.0 35.0 39.0 27.0 39.0 14-15 36.131021817353 40.0 36.0 41.0 27.0 41.0 16-17 36.06991865665786 40.0 36.0 41.0 27.0 41.0 18-19 36.026271807077656 40.0 36.0 41.0 27.0 41.0 20-21 35.949580018757175 40.0 36.0 41.0 27.0 41.0 22-23 35.85143574548539 40.0 36.0 41.0 27.0 41.0 24-25 35.74533181881023 40.0 36.0 41.0 27.0 41.0 26-27 35.60192447810605 40.0 36.0 41.0 26.0 41.0 28-29 35.462601118704484 40.0 36.0 41.0 25.0 41.0 30-31 35.321219141280345 40.0 35.5 41.0 25.0 41.0 32-33 35.14959515153327 39.0 35.0 41.0 24.0 41.0 34-35 34.97958009348693 39.0 35.0 41.0 24.0 41.0 36-37 34.95310315322216 39.0 35.0 41.0 24.0 41.0 38-39 35.13737982520709 39.5 35.0 41.0 24.0 41.0 40-41 35.19720379926092 40.0 35.0 41.0 24.0 41.0 42-43 35.04383199255692 40.0 35.0 41.0 23.0 41.0 44-45 34.92896170473525 40.0 35.0 41.0 22.5 41.0 46-47 34.77378125105089 40.0 35.0 41.0 21.5 41.0 48-49 34.61259215113347 39.0 35.0 41.0 19.5 41.0 50-51 32.933476503095676 37.0 32.5 39.5 16.0 40.0 52-53 33.04317623892598 37.5 32.5 39.5 14.5 40.0 54-55 33.94894406851224 39.0 34.0 40.5 15.0 41.0 56-57 33.964549510333256 39.0 34.0 41.0 14.5 41.0 58-59 33.77350250905164 38.0 34.0 41.0 13.0 41.0 60-61 33.51983458567953 38.0 34.0 40.0 12.0 41.0 62-63 33.22580661433092 37.0 33.0 40.0 8.0 41.0 64-65 32.93462696772795 37.0 33.0 40.0 7.5 41.0 66-67 32.59308133213268 36.0 33.0 39.0 4.5 41.0 68-69 32.23863715339404 36.0 33.0 39.0 2.0 41.0 70-71 31.837381132977868 35.0 32.0 39.0 2.0 40.5 72-73 31.484512257548637 35.0 32.0 37.5 2.0 40.0 74-75 31.097682256539787 35.0 32.0 37.0 2.0 39.0 76-77 30.739190340431414 35.0 31.5 36.5 2.0 39.0 78-79 30.411883152549592 35.0 31.0 36.0 2.0 38.5 80-81 30.117748504470708 35.0 31.0 35.5 2.0 37.0 82-83 29.824037760946975 35.0 31.0 35.0 2.0 37.0 84-85 29.58155464053118 35.0 31.0 35.0 2.0 36.0 86-87 29.365986750413818 35.0 31.0 35.0 2.0 36.0 88-89 29.16508831189212 35.0 30.0 35.0 2.0 36.0 90-91 28.965346503207776 34.0 30.0 35.0 2.0 35.5 92-93 28.791484917666487 34.0 30.0 35.0 2.0 35.0 94-95 28.582335379683222 34.0 30.0 35.0 2.0 35.0 96-97 28.36337569265145 34.0 30.0 35.0 2.0 35.0 98-99 28.11976919714084 34.0 29.5 35.0 2.0 35.0 100-101 27.073670651008293 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 104574.0 3 17361.0 4 11701.0 5 8738.0 6 7661.0 7 7853.0 8 8435.0 9 8954.0 10 9774.0 11 10230.0 12 10005.0 13 10365.0 14 10755.0 15 11479.0 16 11235.0 17 11649.0 18 11306.0 19 10608.0 20 10899.0 21 11351.0 22 12337.0 23 14159.0 24 16739.0 25 19725.0 26 23500.0 27 28335.0 28 32969.0 29 39281.0 30 47284.0 31 57292.0 32 71476.0 33 93146.0 34 128840.0 35 188405.0 36 316407.0 37 576927.0 38 600968.0 39 103579.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.65954521290714 17.412246039323765 12.669565692008963 25.258643055760132 2 15.918317287971831 19.007312676465013 39.58608239539604 25.488287640167112 3 19.511882318717895 23.20348120268703 28.76273426066694 28.521902217928137 4 13.471824379424438 15.15188112288946 36.07539821566181 35.3008962820243 5 14.609679715728266 36.760980234978824 34.128311119619056 14.501028929673854 6 34.3032571863327 34.646262479204445 16.804942504854164 14.245537829608693 7 29.707222264366557 31.141346246191592 20.544516438595224 18.60691505084662 8 26.89138470404061 35.02814238578519 19.34703536100771 18.73343754916649 9 26.872161261815037 15.741523721621961 18.890717804902202 38.4955972116608 10-11 26.039941434277242 24.94652402420358 27.42615008849134 21.587384453027838 12-13 26.512048833293377 22.160296937398613 27.41240613959145 23.915248089716563 14-15 23.544072187106348 23.740575717591124 24.42517951459105 28.29017258071148 16-17 24.048531881797068 26.995476158262697 25.157833638934342 23.79815832100589 18-19 24.107593450238817 26.354068787925726 26.343082390692352 23.195255371143105 20-21 24.571704165403794 25.54504688167446 26.288307068707837 23.594941884213906 22-23 24.398888363513354 25.310026594800277 26.049223742073423 24.241861299612946 24-25 24.17489282016588 25.61242949678741 25.981569180050908 24.231108502995802 26-27 24.03385284986641 25.785076895996163 26.042518061243975 24.13855219289345 28-29 24.263693063128038 25.905066909816554 25.863325348749434 23.967914678305974 30-31 24.39261139218108 25.689722791742625 25.7182356624263 24.199430153649992 32-33 24.098001155051783 25.811801295967353 25.767351794356692 24.32284575462418 34-35 24.409855147197575 25.746095625643413 25.79865217578139 24.045397051377623 36-37 24.47532719771833 25.587222147699407 25.827797990275332 24.109652664306928 38-39 24.315263963339 25.732294221404977 25.833146345250192 24.119295470005834 40-41 24.419229869587344 25.63872383769375 25.817124853434294 24.124921439284616 42-43 24.25818137833695 25.549709908353286 25.791399895819406 24.400708817490358 44-45 24.216890315134414 25.630266021536812 25.91248069449106 24.24036296883771 46-47 24.390973041060544 25.64591329194002 25.697410019717015 24.265703647282418 48-49 24.216521656433954 25.703279035930937 25.677407083747994 24.40279222388711 50-51 24.242824716154036 25.80058470752831 25.775164268821698 24.18142630749596 52-53 24.429026709568912 25.671352266932445 25.7568484970111 24.142772526487544 54-55 24.087274235740175 25.480338137681898 26.046365701316702 24.386021925261225 56-57 24.11973887570987 25.67632329331704 25.882601148970842 24.321336682002254 58-59 24.241039383912362 25.556051895805492 25.91543884861377 24.287469871668378 60-61 24.245996343419044 25.559856620087228 25.97417551401362 24.21997152248011 62-63 24.198071061219594 25.617490852039378 26.034514679324833 24.1499234074162 64-65 24.054967185697613 25.444384914818347 26.035693814048166 24.46495408543587 66-67 24.052142793095424 25.61969501067292 25.904811716460223 24.42335047977143 68-69 24.164908368848703 25.48911627377633 26.001836666237388 24.34413869113758 70-71 24.144445166085475 25.306503510076535 25.99244098697284 24.556610336865152 72-73 24.079185791408655 25.500456747508483 25.888673410556105 24.531684050526756 74-75 23.912104269668305 25.61231923937712 25.989302430408145 24.48627406054643 76-77 24.068960986235094 25.296551295564118 26.055447085717752 24.579040632483036 78-79 24.004016882288276 25.307968464029283 26.071711533334728 24.61630312034771 80-81 24.142118015891455 25.492200970743085 25.892623599545917 24.473057413819543 82-83 24.128273007595507 25.506424828227193 25.920941350752052 24.444360813425252 84-85 24.057279978012733 25.494034848995735 25.949768903405612 24.498916269585923 86-87 23.98041109950307 25.550886329959344 25.996490371930314 24.47221219860727 88-89 23.972747661969446 25.347816333951616 26.04573338681041 24.633702617268526 90-91 23.96987544352039 25.348692977153785 26.06656494816326 24.614866631162567 92-93 24.038767978219227 25.31327649710045 26.163647904967526 24.484307619712798 94-95 23.981311060805716 25.160670685064485 26.245596899483193 24.612421354646607 96-97 23.917421133305805 25.119342904736357 26.253566335478517 24.70966962647932 98-99 23.893360368191395 25.04798450114657 26.23369322801523 24.8249619026468 100-101 24.084619799864605 24.896229038640342 26.33586678364796 24.68328437784709 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 21.5 2 42.5 3 79.5 4 74.0 5 68.5 6 107.0 7 226.5 8 388.0 9 456.0 10 400.5 11 361.0 12 404.0 13 462.0 14 534.0 15 597.5 16 670.0 17 739.5 18 831.0 19 958.0 20 1011.5 21 1111.0 22 1249.0 23 1385.5 24 1610.5 25 1910.5 26 2370.5 27 3173.5 28 4497.0 29 6563.0 30 9660.0 31 13927.5 32 19848.0 33 25080.5 34 29468.0 35 34806.0 36 41901.5 37 49471.0 38 56181.0 39 62725.0 40 68700.0 41 74359.0 42 79834.0 43 86891.0 44 94516.5 45 101817.5 46 106892.0 47 110850.0 48 115650.0 49 118006.5 50 118114.5 51 118688.0 52 118778.5 53 117875.0 54 116705.0 55 112617.0 56 104730.0 57 95180.5 58 86862.5 59 76737.5 60 63077.5 61 51150.5 62 41817.5 63 32075.0 64 23252.5 65 16987.0 66 12389.5 67 9423.0 68 7195.0 69 5344.5 70 3971.5 71 2797.0 72 1968.5 73 1430.0 74 1101.0 75 797.5 76 547.0 77 362.5 78 263.0 79 206.0 80 158.0 81 120.5 82 97.0 83 86.0 84 77.5 85 63.0 86 50.5 87 47.5 88 45.0 89 36.0 90 34.0 91 33.5 92 30.0 93 24.0 94 11.5 95 6.0 96 8.5 97 10.0 98 8.0 99 7.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05186245240648505 2 0.07147901401556621 3 0.0684524587958794 4 0.06789198560704851 5 0.06299718642459207 6 0.009640138847891312 7 0.011994126240981052 8 0.016926290302692885 9 0.006165205077139794 10-11 0.0127787887053443 12-13 0.022213420717330953 14-15 0.038859474425608394 16-17 0.02645433451281802 18-19 0.0102192944763499 20-21 0.01984075088461352 22-23 0.036430757274007866 24-25 0.033628391329853416 26-27 0.020662778228232155 28-29 0.01195676136172566 30-31 0.01216226819763032 32-33 0.008948888581666549 34-35 0.00541790749203194 36-37 8.593922228740318E-4 38-39 0.004278278674742462 40-41 0.0013451356531941367 42-43 0.2222089369318203 44-45 0.1911774047102167 46-47 0.1967821365985256 48-49 0.20416170025146563 50-51 0.19545568338495914 52-53 0.2029660241152931 54-55 0.19904271179347682 56-57 0.20169561822060972 58-59 0.21114893267222407 60-61 0.21606241429430822 62-63 0.20025707036927712 64-65 0.2006867664807141 66-67 0.19797781273469817 68-69 0.1930269662333586 70-71 0.18419017228945825 72-73 0.19616561609081157 74-75 0.1956425077812361 76-77 0.1890849714719147 78-79 0.20857075600360198 80-81 0.21976153734059206 82-83 0.21856586120441954 84-85 0.2119896424554704 86-87 0.23265242068370257 88-89 0.22445082968714386 90-91 0.2315127918664131 92-93 0.22661799268395666 94-95 0.23070944696242215 96-97 0.23829451745126687 98-99 0.23080285916056062 100-101 0.23792086865871295 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2676310.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.81395520336112 #Duplication Level Percentage of deduplicated Percentage of total 1 79.92577220606512 49.40528102739754 2 11.130550863114905 13.760467448826343 3 3.6344389268645263 6.73977135043667 4 1.693180327340251 4.1864869162169045 5 0.9307635628671981 2.8767088589996885 6 0.5884394171156082 2.1824260661685675 7 0.4000318115506652 1.7309283935378554 8 0.28557040195283434 1.4121788826974664 9 0.21774495862009438 1.211370940611021 >10 1.1247072084257284 12.095390489848906 >50 0.051278824181096784 2.1217789650352428 >100 0.016249029859301867 1.7012995657708134 >500 0.001151275181491829 0.4954573333430947 >1k 1.2118686120047691E-4 0.08045376110983905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.7364879255392686E-5 2 0.0 0.0 0.0 3.7364879255392686E-5 3.7364879255392686E-5 3 0.0 0.0 0.0 3.7364879255392686E-5 3.7364879255392686E-5 4 0.0 0.0 0.0 3.7364879255392686E-5 3.7364879255392686E-5 5 0.0 0.0 0.0 3.7364879255392686E-5 3.7364879255392686E-5 6 0.0 0.0 0.0 3.7364879255392686E-5 7.472975851078537E-5 7 0.0 0.0 0.0 3.7364879255392686E-5 7.472975851078537E-5 8 0.0 0.0 0.0 3.7364879255392686E-5 1.1209463776617806E-4 9 0.0 0.0 0.0 3.7364879255392686E-5 1.1209463776617806E-4 10-11 0.0 0.0 0.0 9.341219813848172E-5 1.4945951702157075E-4 12-13 0.0 0.0 0.0 1.8682439627696343E-4 2.2418927553235612E-4 14-15 0.0 0.0 0.0 1.8682439627696343E-4 2.8023659441544515E-4 16-17 0.0 0.0 0.0 2.8023659441544515E-4 2.989190340431415E-4 18-19 0.0 0.0 0.0 4.4837855106471224E-4 2.989190340431415E-4 20-21 0.0 0.0 0.0 4.670609906924086E-4 2.989190340431415E-4 22-23 0.0 0.0 0.0 5.97838068086283E-4 3.362839132985342E-4 24-25 0.0 0.0 0.0 7.472975851078537E-4 3.7364879255392686E-4 26-27 0.0 0.0 0.0 8.780746625017281E-4 3.7364879255392686E-4 28-29 0.0 0.0 0.0 0.002372669832717436 3.7364879255392686E-4 30-31 0.0 0.0 0.0 0.008238955875814087 3.7364879255392686E-4 32-33 0.0 0.0 0.0 0.02155953533036158 3.923312321816232E-4 34-35 0.0 0.0 0.0 0.039233123218162316 4.4837855106471224E-4 36-37 0.0 0.0 0.0 0.06981627688870123 4.4837855106471224E-4 38-39 0.0 1.8682439627696343E-5 0.0 0.12388325717125445 4.857434303201049E-4 40-41 0.0 3.7364879255392686E-5 0.0 0.18895419439452082 4.857434303201049E-4 42-43 0.0 3.7364879255392686E-5 0.0 0.2524184418098053 5.044258699478013E-4 44-45 0.0 5.604731888308903E-5 0.0 0.3302494852987883 5.41790749203194E-4 46-47 0.0 7.472975851078537E-5 0.0 0.42016806722689076 6.165205077139793E-4 48-49 0.0 7.472975851078537E-5 0.0 0.5220807753959743 7.472975851078537E-4 50-51 0.0 7.472975851078537E-5 0.0 0.6347919336698664 7.472975851078537E-4 52-53 0.0 7.472975851078537E-5 0.0 0.7505296471634453 8.407097832463354E-4 54-55 0.0 7.472975851078537E-5 0.0 0.8766174322107678 8.967571021294245E-4 56-57 0.0 7.472975851078537E-5 0.0 1.0236295496411103 8.967571021294245E-4 58-59 0.0 7.472975851078537E-5 0.0 1.1865404231946224 9.341219813848172E-4 60-61 0.0 7.472975851078537E-5 0.0 1.3669006953604028 9.714868606402098E-4 62-63 0.0 7.472975851078537E-5 0.0 1.5535195848014618 9.714868606402098E-4 64-65 0.0 7.472975851078537E-5 0.0 1.7448464490287 9.714868606402098E-4 66-67 0.0 7.472975851078537E-5 0.0 1.9646453512485476 9.714868606402098E-4 68-69 0.0 7.472975851078537E-5 0.0 2.2171011579376083 9.714868606402098E-4 70-71 0.0 7.472975851078537E-5 0.0 2.4858480519820203 9.714868606402098E-4 72-73 1.8682439627696343E-5 7.472975851078537E-5 0.0 2.766645119586296 0.0010462166191509952 74-75 3.7364879255392686E-5 7.472975851078537E-5 0.0 3.05678340700442 0.0010462166191509952 76-77 3.7364879255392686E-5 7.472975851078537E-5 0.0 3.373973867003449 0.0010462166191509952 78-79 3.7364879255392686E-5 9.341219813848172E-5 0.0 3.7310700180472365 0.0010462166191509952 80-81 3.7364879255392686E-5 1.1209463776617806E-4 0.0 4.121831925300134 0.0010648990587786916 82-83 5.604731888308903E-5 1.4945951702157075E-4 0.0 4.525129749543215 0.0011209463776617806 84-85 7.472975851078537E-5 1.4945951702157075E-4 0.0 4.937376462367961 0.0011209463776617806 86-87 7.472975851078537E-5 1.4945951702157075E-4 0.0 5.376918219488774 0.0011209463776617806 88-89 7.472975851078537E-5 1.4945951702157075E-4 0.0 5.850854347964175 0.0011583112569171733 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3430 0.0 44.554356 1 GGTATCA 1785 0.0 44.13654 1 TCAACGC 4085 0.0 36.599857 4 CAACGCA 4225 0.0 35.385098 5 ATCAACG 4395 0.0 33.909668 3 TATCAAC 4475 0.0 33.72834 2 AACGCAG 4470 0.0 33.532383 6 GTACATG 7520 0.0 28.715868 1 ACGCAGA 5355 0.0 28.083395 7 TACATGG 7885 0.0 26.967283 2 CGCAGAG 5785 0.0 25.671764 8 ACATGGG 8215 0.0 25.190205 3 GTATATA 770 0.0 24.03822 1 TATCGCG 60 1.7012226E-4 23.77204 90-91 CATGGGG 7185 0.0 22.195932 4 GCAGAGT 6825 0.0 20.78659 9 GAGTACA 5750 0.0 20.552275 1 AGTACAT 5690 0.0 19.435894 2 AGAGTAC 5540 0.0 19.099142 10-11 ATGGGGG 4245 0.0 18.224115 5 >>END_MODULE