##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921690_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2676310 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297487211870074 33.0 31.0 34.0 28.0 34.0 2 31.4323464023226 34.0 31.0 34.0 28.0 34.0 3 31.510048163329362 34.0 31.0 34.0 28.0 34.0 4 34.98308865564901 37.0 35.0 37.0 32.0 37.0 5 34.7143062649693 37.0 35.0 37.0 32.0 37.0 6 34.692454536283165 37.0 35.0 37.0 32.0 37.0 7 34.573634220251016 37.0 35.0 37.0 32.0 37.0 8 34.52114366422425 37.0 35.0 37.0 32.0 37.0 9 36.10667523567898 39.0 37.0 39.0 32.0 39.0 10-11 35.99141747405943 39.0 37.0 39.0 31.0 39.0 12-13 35.90645104640345 39.0 37.0 39.0 31.0 39.0 14-15 37.15164480198482 40.0 38.0 41.0 31.0 41.0 16-17 37.120387585892516 40.0 38.0 41.0 31.0 41.0 18-19 37.07346140768446 40.0 38.0 41.0 31.0 41.0 20-21 37.01596040817394 40.0 38.0 41.0 31.0 41.0 22-23 36.92210693081145 40.0 37.5 41.0 30.0 41.0 24-25 36.84273608064836 40.0 37.0 41.0 30.0 41.0 26-27 36.71689266191136 40.0 37.0 41.0 30.0 41.0 28-29 36.5961161076258 40.0 37.0 41.0 30.0 41.0 30-31 36.44134050240817 40.0 37.0 41.0 30.0 41.0 32-33 36.39516218225841 40.0 37.0 41.0 29.5 41.0 34-35 36.5331039752495 40.0 37.0 41.0 30.0 41.0 36-37 36.53814636570502 40.0 37.0 41.0 30.0 41.0 38-39 36.43368163628279 40.0 37.0 41.0 30.0 41.0 40-41 36.353126132622904 40.0 37.0 41.0 29.5 41.0 42-43 36.234205678714346 40.0 36.5 41.0 29.0 41.0 44-45 36.106564261987586 40.0 36.0 41.0 28.0 41.0 46-47 35.95680694687835 40.0 36.0 41.0 28.0 41.0 48-49 35.81038986515016 40.0 35.5 41.0 27.5 41.0 50-51 35.65472553627943 40.0 35.0 41.0 27.0 41.0 52-53 35.47631851317672 39.0 35.0 41.0 26.5 41.0 54-55 35.26057108481454 39.0 35.0 41.0 26.0 41.0 56-57 35.0303894167716 39.0 35.0 41.0 26.0 41.0 58-59 34.782249253636536 38.5 35.0 40.5 26.0 41.0 60-61 34.50205077139793 38.0 34.0 40.0 25.5 41.0 62-63 34.19443954549361 37.5 34.0 40.0 25.0 41.0 64-65 33.85521819221241 37.0 34.0 40.0 24.0 41.0 66-67 33.4976968288427 36.0 34.0 39.0 23.0 41.0 68-69 33.13486479518441 36.0 33.5 39.0 22.0 41.0 70-71 32.73917109751859 35.0 33.0 38.5 22.0 40.0 72-73 32.379771588493114 35.0 33.0 37.5 21.0 39.5 74-75 31.98338309089754 35.0 33.0 37.0 20.0 39.0 76-77 29.310386128662223 33.0 29.0 34.5 13.0 36.5 78-79 30.874153031599477 34.5 31.5 36.0 16.5 37.0 80-81 31.05976176152987 35.0 32.0 35.5 18.0 37.0 82-83 30.88834720193102 35.0 32.0 35.0 16.5 37.0 84-85 30.695420747222855 35.0 32.0 35.0 14.0 36.0 86-87 30.495055505528136 35.0 32.0 35.0 9.5 36.0 88-89 30.238254537030464 35.0 32.0 35.0 5.5 36.0 90-91 30.045288288725892 34.5 31.0 35.0 2.0 35.0 92-93 29.88869077199577 34.0 31.0 35.0 2.0 35.0 94-95 29.78804753559939 34.0 31.0 35.0 2.0 35.0 96-97 29.592666021499753 34.0 31.0 35.0 2.0 35.0 98-99 29.396054081926234 34.0 31.0 35.0 2.0 35.0 100-101 28.28295657080084 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 56051.0 3 18308.0 4 10141.0 5 6807.0 6 5897.0 7 6030.0 8 6105.0 9 6501.0 10 7202.0 11 7625.0 12 8337.0 13 8794.0 14 9293.0 15 10070.0 16 10601.0 17 11304.0 18 10518.0 19 9709.0 20 9284.0 21 9361.0 22 9811.0 23 11409.0 24 13322.0 25 15974.0 26 19367.0 27 23581.0 28 28338.0 29 34292.0 30 42046.0 31 51809.0 32 66266.0 33 87279.0 34 124074.0 35 187088.0 36 335099.0 37 655271.0 38 663517.0 39 79829.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.227160505839855 19.112291552133158 13.290327989039213 26.370219952987778 2 15.003441310522788 20.441160315748647 37.816266151927316 26.739132221801242 3 18.117904155322158 24.30219600768001 28.55381724773714 29.026082589260692 4 13.121223557898906 16.410525647109818 34.99362885958455 35.474621935406724 5 14.330829905836492 37.115857179430165 34.18574447847544 14.367568436257901 6 34.34584537755843 35.25603755705749 16.426429837593524 13.97168722779055 7 29.518665625432032 31.24843534568118 20.560772107864935 18.672126921021857 8 26.82271485739694 35.51572874592256 19.079179915630103 18.582376481050403 9 26.53127871258513 15.685034874523085 18.809375150627226 38.974311262264564 10-11 26.01146972216895 25.233669141019416 27.370120779366914 21.38474035744472 12-13 26.34887225855243 22.348387260698114 27.445180389870274 23.857560090879183 14-15 23.36474807146216 23.91276688405942 24.384501746982785 28.337983297495633 16-17 23.979121248869014 27.241356053924253 25.052184734239447 23.727337962967287 18-19 24.018966033917508 26.555044394075612 26.340491088676803 23.085498483330085 20-21 24.460023999556103 25.61508904365898 26.273797084369665 23.651089872415252 22-23 24.22544473547534 25.469527072723263 26.079452679248664 24.22557551255273 24-25 24.08841709192848 25.778067980237584 25.980157251122588 24.153357676711344 26-27 23.955997187096216 25.928093839187692 26.009308589146407 24.10660038456968 28-29 24.13697495822385 26.083171908490048 25.844883430337706 23.934969702948393 30-31 24.321177577871534 25.841153077387485 25.732197675854785 24.105471668886196 32-33 24.006109094116034 25.91863895900259 25.780485539948366 24.294766406933007 34-35 24.282263573353582 25.868723776668016 25.882774325760487 23.966238324217915 36-37 24.362277927139363 25.811793192225558 25.813680192660875 24.012248687974203 38-39 24.295148917726273 25.91469224417201 25.789052837675758 24.00110600042596 40-41 24.317350970710265 25.767143503846203 25.84841513774795 24.067090387695586 42-43 24.19232969652037 25.691081032906197 25.78930375652872 24.32728551404471 44-45 24.13958294019502 25.758347455172892 25.83876253449497 24.26330707013712 46-47 24.328014997311502 25.758076804798424 25.72540003355488 24.1885081643352 48-49 24.103078729973905 25.847277594652756 25.685361113363587 24.364282562009755 50-51 24.174308601389562 25.873463610540455 25.718881177412207 24.23334661065778 52-53 24.35893914893895 25.819566389132543 25.67174747477578 24.14974698715272 54-55 23.99057691808275 25.62838762279797 25.92201351583377 24.45902194328551 56-57 24.042031432022622 25.806974161020218 25.768559943275505 24.382434463681655 58-59 24.098808089720354 25.71883369218262 25.797330221126273 24.385027996970756 60-61 24.102439351586387 25.725154940929905 25.888340142681486 24.28406556480222 62-63 24.06103608792895 25.766665040941188 25.903300727259886 24.268998143869975 64-65 23.913371367695092 25.614469878561046 25.901475116462713 24.570683637281153 66-67 23.895383681277988 25.85662653890688 25.742614050810054 24.50537572900508 68-69 23.962725347290952 25.69372675310926 25.807859535554716 24.535688364045072 70-71 23.94802663914237 25.541735036514503 25.796812134520824 24.713426189822304 72-73 23.922952457521923 25.726918087087764 25.632148593184144 24.717980862206165 74-75 23.764579510963387 25.79944139360821 25.706340328309263 24.72963876711914 76-77 23.802095591931977 25.466596787388173 25.89710706902301 24.834200551656835 78-79 23.765013011869055 25.53003873831054 25.864450691205292 24.840497558615112 80-81 23.858810544191996 25.698271175464587 25.646766876024007 24.796151404319406 82-83 23.826248155785766 25.647916026233393 25.7333548861516 24.792480931829246 84-85 23.77889659516682 25.625587044231708 25.739178058634792 24.856338301966673 86-87 23.655696872719766 25.731296227435575 25.721929922465314 24.891076977379345 88-89 23.635017319269068 25.5513133583868 25.751908473466678 25.061760848877455 90-91 23.60016204369933 25.526773186789462 25.72676074495131 25.14630402455989 92-93 23.57919874777821 25.554786479100073 25.83187830838653 25.034136464735184 94-95 23.439026554873063 25.400023355209377 25.948272882266387 25.21267720765117 96-97 23.34064045842805 25.33116561102003 25.965282311512983 25.362911619038936 98-99 23.305889839168966 25.310570204167192 25.94288280741191 25.440657149251926 100-101 23.198488365315203 25.275043081737973 25.973000865371247 25.55346768757557 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 17.0 2 33.0 3 62.5 4 65.0 5 55.5 6 94.0 7 226.0 8 338.5 9 348.0 10 293.0 11 263.5 12 269.5 13 280.0 14 324.5 15 339.0 16 363.5 17 433.0 18 494.0 19 542.5 20 611.0 21 709.0 22 837.0 23 1043.5 24 1354.0 25 1755.5 26 2345.5 27 3298.0 28 4755.0 29 7062.5 30 10340.5 31 14677.0 32 20799.5 33 26144.5 34 30108.5 35 35090.0 36 42086.0 37 49508.0 38 56087.0 39 62249.5 40 68497.0 41 74503.5 42 80087.0 43 87297.5 44 94513.0 45 101746.0 46 107309.5 47 111402.5 48 116188.0 49 119043.5 50 119081.0 51 119248.5 52 119732.0 53 119093.0 54 117942.0 55 113769.0 56 105319.5 57 95608.5 58 86681.0 59 76175.5 60 62650.0 61 50421.5 62 41167.0 63 31411.5 64 22380.5 65 16004.5 66 11703.5 67 8986.0 68 6701.5 69 4729.0 70 3470.5 71 2471.0 72 1671.0 73 1197.0 74 868.0 75 587.0 76 377.5 77 237.5 78 121.5 79 59.5 80 44.5 81 34.5 82 24.5 83 11.5 84 5.0 85 3.0 86 4.0 87 3.0 88 2.5 89 1.5 90 1.0 91 2.5 92 2.0 93 1.0 94 1.0 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1583897231636096 2 1.4945951702157075E-4 3 0.01016324715746681 4 0.006725678265970684 5 0.02410034711972828 6 0.0023166225138343466 7 0.0 8 0.0 9 3.7364879255392686E-5 10-11 0.047341302016582536 12-13 3.549663529262305E-4 14-15 0.004651927467296389 16-17 1.8682439627696343E-5 18-19 0.0019429737212804197 20-21 3.9233123218162315E-4 22-23 0.0 24-25 6.53885386969372E-4 26-27 0.0026902713063882734 28-29 0.0053058128542657615 30-31 0.01660868882902205 32-33 0.01119078133699011 34-35 0.009640138847891312 36-37 0.003923312321816232 38-39 0.0 40-41 0.003717805485911572 42-43 0.009303854934592778 44-45 0.007286151454801573 46-47 0.0036243932877730906 48-49 0.008930206142038852 50-51 0.0025408117893667027 52-53 0.0023353049534620427 54-55 0.0043156435539978555 56-57 0.00812686123804791 58-59 0.014777809745507808 60-61 0.007827942204004767 62-63 0.021727677287010846 64-65 0.04100795498279347 66-67 0.05989590144639447 68-69 0.05064809383068478 70-71 0.06817222220146396 72-73 0.03254480983144703 74-75 0.02701480770164891 76-77 0.2238343091794299 78-79 0.08268847779218402 80-81 0.0663600255575774 82-83 0.02662247646946729 84-85 0.05090964798547253 86-87 0.06835904659774092 88-89 0.289596496668921 90-91 0.29495835684206984 92-93 0.051731675329091176 94-95 0.00924780761570969 96-97 0.0143107487548154 98-99 8.593922228740318E-4 100-101 7.472975851078537E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2676310.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.65443646175428 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07168472313701 47.96048476963381 2 11.497203663854668 13.94712818234243 3 3.847193879348959 7.000481301330644 4 1.7257778817215865 4.187043394959315 5 0.9997417021804711 3.031938477653573 6 0.6247268273227454 2.273547219228048 7 0.43013925269231224 1.8262897780492626 8 0.3082559313159373 1.4957671839969127 9 0.2360760599927889 1.288715434287652 >10 1.1894506255631594 12.572653774471082 >50 0.051120577837132135 2.0896375414231425 >100 0.017145352574262387 1.6895762673573136 >500 0.0014217090232033248 0.5955698102012509 >1k 6.181343578744289E-5 0.041166865065704966 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.7364879255392686E-5 5 0.0 0.0 0.0 0.0 3.7364879255392686E-5 6 0.0 0.0 0.0 0.0 3.7364879255392686E-5 7 0.0 0.0 0.0 0.0 3.7364879255392686E-5 8 0.0 0.0 0.0 0.0 7.472975851078537E-5 9 0.0 0.0 0.0 0.0 7.472975851078537E-5 10-11 0.0 0.0 0.0 0.0 7.472975851078537E-5 12-13 0.0 0.0 0.0 0.0 1.307770773938744E-4 14-15 0.0 0.0 0.0 1.8682439627696343E-5 1.681419566492671E-4 16-17 0.0 0.0 0.0 5.604731888308903E-5 1.8682439627696343E-4 18-19 0.0 0.0 0.0 7.472975851078537E-5 1.8682439627696343E-4 20-21 0.0 0.0 0.0 1.307770773938744E-4 2.0550683590465977E-4 22-23 0.0 0.0 0.0 2.2418927553235612E-4 3.362839132985342E-4 24-25 0.0 0.0 0.0 3.923312321816232E-4 4.4837855106471224E-4 26-27 0.0 0.0 0.0 5.231083095754976E-4 4.4837855106471224E-4 28-29 0.0 0.0 0.0 0.001905608842025027 4.4837855106471224E-4 30-31 0.0 0.0 0.0 0.00807081391916482 4.4837855106471224E-4 32-33 0.0 0.0 0.0 0.021933184122915506 4.4837855106471224E-4 34-35 0.0 0.0 0.0 0.03962545445034395 4.857434303201049E-4 36-37 0.0 0.0 0.0 0.07017124324162746 4.857434303201049E-4 38-39 0.0 0.0 0.0 0.12427558840343607 5.044258699478013E-4 40-41 0.0 0.0 0.0 0.18891682951526542 5.604731888308903E-4 42-43 1.8682439627696343E-5 0.0 0.0 0.2520821578965068 5.97838068086283E-4 44-45 3.7364879255392686E-5 0.0 0.0 0.3300066135836282 6.912502662247647E-4 46-47 3.7364879255392686E-5 0.0 0.0 0.42009333746837996 7.09932705852461E-4 48-49 3.7364879255392686E-5 0.0 0.0 0.5219873631978358 7.472975851078537E-4 50-51 3.7364879255392686E-5 0.0 0.0 0.6340446360847585 7.846624643632464E-4 52-53 3.7364879255392686E-5 0.0 0.0 0.7490724168724848 8.407097832463354E-4 54-55 3.7364879255392686E-5 0.0 0.0 0.8745810462913489 9.341219813848172E-4 56-57 3.7364879255392686E-5 0.0 0.0 1.0198743792759433 9.901693002679062E-4 58-59 3.7364879255392686E-5 0.0 0.0 1.182318191838763 0.0010088517398956025 60-61 3.7364879255392686E-5 0.0 0.0 1.3634257615896515 0.0010462166191509952 62-63 3.7364879255392686E-5 0.0 0.0 1.5494094480833684 0.0010462166191509952 64-65 3.7364879255392686E-5 0.0 0.0 1.7396714132518283 0.0010462166191509952 66-67 3.7364879255392686E-5 0.0 0.0 1.9586856530073122 0.0010462166191509952 68-69 3.7364879255392686E-5 0.0 0.0 2.2097029118450404 0.0010462166191509952 70-71 3.7364879255392686E-5 0.0 0.0 2.4795894347067415 0.0011209463776617806 72-73 3.7364879255392686E-5 0.0 0.0 2.760778833543199 0.0013451356531941367 74-75 3.7364879255392686E-5 0.0 0.0 3.0512160399953667 0.0013451356531941367 76-77 3.7364879255392686E-5 0.0 0.0 3.37031210883642 0.0013451356531941367 78-79 3.7364879255392686E-5 0.0 0.0 3.728902855050424 0.0013451356531941367 80-81 3.7364879255392686E-5 0.0 0.0 4.121607736024601 0.001363818092821833 82-83 3.7364879255392686E-5 0.0 0.0 4.525671540292418 0.001419865411704922 84-85 3.7364879255392686E-5 0.0 0.0 4.939711767321424 0.0014572302909603148 86-87 3.7364879255392686E-5 0.0 0.0 5.380075551785854 0.0014945951702157075 88-89 3.7364879255392686E-5 1.8682439627696343E-5 0.0 5.856664586688388 0.0015319600494711001 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1865 0.0 43.57923 1 GTATCAA 3300 0.0 41.91228 1 TCAACGC 4035 0.0 33.0472 4 CAACGCA 4120 0.0 32.5067 5 ATCAACG 4160 0.0 32.0536 3 AACGCAG 4465 0.0 30.203764 6 TATCAAC 4440 0.0 30.139076 2 GTACATG 7135 0.0 26.312698 1 TACATGG 7605 0.0 24.272482 2 ACGCAGA 5515 0.0 24.021858 7 ACATGGG 8110 0.0 22.351482 3 CGCAGAG 5855 0.0 22.30251 8 GTATATA 860 0.0 22.106693 1 CATGGGG 7015 0.0 19.820375 4 TATACCG 175 9.9558056E-5 18.996826 5 AGAGTAC 5575 0.0 18.397758 10-11 GCAGAGT 6925 0.0 18.10257 9 GAGTACA 5630 0.0 17.390862 1 GTATAAT 910 0.0 17.235933 1 TATACTG 1135 0.0 17.155724 5 >>END_MODULE