##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921689_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3180157 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50521342185307 33.0 31.0 34.0 30.0 34.0 2 31.63901562092689 34.0 31.0 34.0 30.0 34.0 3 31.708202456671163 34.0 31.0 34.0 29.0 34.0 4 35.19519602334098 37.0 35.0 37.0 33.0 37.0 5 34.95558363942409 37.0 35.0 37.0 32.0 37.0 6 34.937506544488215 37.0 35.0 37.0 32.0 37.0 7 34.82994613159036 37.0 35.0 37.0 32.0 37.0 8 34.77810372255206 37.0 35.0 37.0 32.0 37.0 9 36.38158965107697 39.0 37.0 39.0 32.0 39.0 10-11 36.27743410152392 39.0 37.0 39.0 32.0 39.0 12-13 36.21118705774589 39.0 37.0 39.0 32.0 39.0 14-15 37.47074609838445 40.0 38.0 41.0 32.0 41.0 16-17 37.440899301512474 40.0 38.0 41.0 32.0 41.0 18-19 37.40391071887331 40.0 38.0 41.0 32.0 41.0 20-21 37.3508392824631 40.0 38.0 41.0 31.5 41.0 22-23 37.263437779958664 40.0 38.0 41.0 31.0 41.0 24-25 37.182576520593166 40.0 38.0 41.0 31.0 41.0 26-27 37.05854883894097 40.0 37.0 41.0 31.0 41.0 28-29 36.94292640269018 40.0 37.0 41.0 30.0 41.0 30-31 36.788056375833015 40.0 37.0 41.0 30.0 41.0 32-33 36.74093496012932 40.0 37.0 41.0 30.0 41.0 34-35 36.87593112541299 40.0 37.0 41.0 30.0 41.0 36-37 36.8763889644442 40.0 37.0 41.0 30.0 41.0 38-39 36.77222665421864 40.0 37.0 41.0 30.0 41.0 40-41 36.697928750058566 40.0 37.0 41.0 30.0 41.0 42-43 36.58004494746643 40.0 37.0 41.0 30.0 41.0 44-45 36.455210072961805 40.0 37.0 41.0 30.0 41.0 46-47 36.3076096557497 40.0 36.0 41.0 29.5 41.0 48-49 36.16881745146544 40.0 36.0 41.0 29.0 41.0 50-51 36.018566850630336 40.0 36.0 41.0 28.0 41.0 52-53 35.85244722194533 39.5 35.0 41.0 28.0 41.0 54-55 35.64677828799019 39.0 35.0 41.0 28.0 41.0 56-57 35.42963979451329 39.0 35.0 41.0 27.5 41.0 58-59 35.19619660287212 39.0 35.0 41.0 27.0 41.0 60-61 34.92718692819254 38.0 35.0 40.0 26.0 41.0 62-63 34.6304017380274 38.0 34.0 40.0 26.0 41.0 64-65 34.30112664248966 37.0 34.0 40.0 26.0 41.0 66-67 33.954521427715676 37.0 34.0 39.5 26.0 41.0 68-69 33.59091988225738 36.0 34.0 39.0 25.0 41.0 70-71 33.193108390560596 35.5 33.5 39.0 24.5 40.0 72-73 32.832185486439826 35.0 33.0 38.0 24.0 40.0 74-75 32.4240672708926 35.0 33.0 37.0 22.5 39.0 76-77 29.688637542108772 33.0 29.0 34.5 18.5 36.5 78-79 31.262579646225014 34.5 31.5 36.0 20.0 38.0 80-81 31.438467817783838 35.0 32.0 36.0 20.0 37.0 82-83 31.256986526136917 35.0 32.0 35.0 20.0 37.0 84-85 31.050145951913695 35.0 32.0 35.0 20.0 36.5 86-87 30.830853319505923 35.0 32.0 35.0 18.5 36.0 88-89 30.55251061504196 35.0 32.0 35.0 16.0 36.0 90-91 30.352144249482023 34.5 32.0 35.0 11.0 35.5 92-93 30.195680118937524 34.0 32.0 35.0 8.5 35.0 94-95 30.090873658124423 34.0 31.5 35.0 2.0 35.0 96-97 29.889856695754332 34.0 31.0 35.0 2.0 35.0 98-99 29.687193588241083 34.0 31.0 35.0 2.0 35.0 100-101 28.565089710979677 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 50101.0 3 17396.0 4 9701.0 5 6889.0 6 6197.0 7 6248.0 8 6545.0 9 7092.0 10 7883.0 11 8822.0 12 9350.0 13 9925.0 14 11013.0 15 11671.0 16 12670.0 17 13230.0 18 12721.0 19 11535.0 20 11025.0 21 11221.0 22 11697.0 23 13330.0 24 16099.0 25 19077.0 26 22724.0 27 27769.0 28 33368.0 29 40525.0 30 49424.0 31 61683.0 32 78670.0 33 103105.0 34 146618.0 35 220021.0 36 387046.0 37 757813.0 38 842543.0 39 107403.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.92629917470069 20.079994279823115 14.177848993000028 25.815857552476167 2 14.787091937743856 21.03732777552771 38.298483846055156 25.877096440673274 3 17.27081633795482 25.30547653206851 29.517269401148376 27.906437728828294 4 12.815844911967995 17.535550389113194 36.142761947380485 33.505842751538324 5 13.968040482223604 37.436085997045865 34.6976917986256 13.898181722104935 6 32.85912124278557 36.36742700345463 17.234712815581485 13.538738938178325 7 28.18794795351299 31.947070537712445 21.781283125329974 18.08369838344459 8 26.10795630530191 35.38642903479294 20.11212025066687 18.393494409238286 9 26.394797489557902 15.721204959377792 19.700159457536216 38.18383809352809 10-11 25.254277547848602 25.601782593443794 28.27608175515925 20.867858103548357 12-13 25.782982919652113 23.08949023095166 27.954266879570937 23.173259969825285 14-15 23.083917561693823 24.601207932885067 25.09938748003917 27.215487025381936 16-17 23.340973942634584 27.5410817046268 25.93638080390069 23.18156354883793 18-19 23.320247778605495 27.072413199974715 27.011676058937823 22.595662962481963 20-21 23.92164199930978 26.24972583818832 26.87622193624667 22.95241022625523 22-23 23.811123760733157 26.05148520206474 26.511336784840623 23.62605425236148 24-25 23.629624924492152 26.193417067776725 26.574203028615468 23.60275497911565 26-27 23.459773427627642 26.442798659829652 26.55208961764202 23.545338294900684 28-29 23.56926164539117 26.49180851642589 26.448443041067637 23.490486797115302 30-31 23.793769072122796 26.32134969103259 26.304507645360932 23.58037359148368 32-33 23.626788170142184 26.376089444437977 26.15487478917149 23.842247596248345 34-35 23.936200239481035 26.402666211710358 26.19307706399081 23.468056484817797 36-37 24.003152189858433 26.12650929092552 26.292687935248033 23.577650583968012 38-39 23.729303888031925 26.33346817994649 26.237450892746946 23.69977703927464 40-41 23.958082090549603 26.162435829907 26.281349989386875 23.598132090156522 42-43 23.8728544291049 26.116413883674173 26.110753213491705 23.89997847372922 44-45 23.79843709437734 26.177167564936184 26.217027177337226 23.807368163349253 46-47 23.97009198378499 26.144923124624807 25.999845283845968 23.885139607744236 48-49 23.722632902093263 26.263844328393226 26.10924447972245 23.904278289791066 50-51 23.8279871165649 26.236076291193307 26.104789150493584 23.83114744174821 52-53 24.031159617965287 26.095904895399563 26.113058565396596 23.759876921238554 54-55 23.665710429017633 26.068794079240625 26.310854017966996 23.954641473774743 56-57 23.659664863148 26.13721522251521 26.161854400852857 24.041265513483935 58-59 23.69128144727645 26.007574786669192 26.29918127202007 24.001962494034284 60-61 23.692494877592907 26.125966480408273 26.357231505441288 23.824307136557533 62-63 23.704277534205602 26.09981369205358 26.317479623207234 23.87842915053358 64-65 23.504283990371245 25.974813861278996 26.236263736263737 24.284638412086025 66-67 23.525952459128067 26.057819877327177 26.17935366678849 24.236873996756266 68-69 23.619712775292143 26.01350894309148 26.241101505213017 24.125676776403367 70-71 23.510828159366312 25.916968666064477 26.171511952190297 24.400691222378914 72-73 23.509473181574112 26.026784295949675 26.08228870028471 24.381453822191506 74-75 23.513289679212036 26.1229119970408 26.030075169050154 24.33372315469701 76-77 23.56696661381331 25.859744384324035 26.18011107242938 24.39317792943328 78-79 23.44671176121793 25.92673897909058 26.185321358476504 24.441227901214983 80-81 23.584216352698398 26.049034557802237 26.04030243662368 24.32644665287568 82-83 23.61001764263119 25.98480575963181 26.10283744716883 24.302339150568173 84-85 23.540071837229355 26.057332294457446 26.02266114885767 24.37993471945553 86-87 23.50100774571767 26.100677022610952 25.991893979801027 24.40642125187035 88-89 23.37216600850355 25.94026381196301 26.070813514843366 24.616756664690076 90-91 23.3434268402119 25.990243994757684 26.088671457928214 24.5776577071022 92-93 23.414799208345443 25.850610990129802 26.211924119838038 24.52266568168672 94-95 23.26439026384542 25.76962841187214 26.235349892563914 24.730631431718532 96-97 23.260370567632673 25.628770970760645 26.306773213470535 24.804085248136147 98-99 23.0708916322092 25.69003107893282 26.16843941997941 25.07063786887857 100-101 23.040769749370472 25.68270321670159 26.245742341875484 25.030784692052453 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 40.0 2 39.5 3 51.0 4 44.5 5 49.0 6 82.5 7 226.5 8 341.5 9 348.0 10 318.5 11 272.0 12 271.5 13 303.0 14 362.0 15 420.0 16 459.0 17 506.0 18 558.0 19 600.5 20 682.0 21 814.0 22 969.0 23 1237.5 24 1563.5 25 2017.0 26 2773.5 27 3941.0 28 5813.0 29 8756.5 30 13199.0 31 19236.0 32 27373.0 33 35053.0 34 41442.5 35 49446.5 36 60091.5 37 70858.5 38 80706.5 39 89719.5 40 96764.0 41 104066.5 42 111580.0 43 118329.5 44 124311.0 45 130455.5 46 134565.5 47 137260.0 48 139772.0 49 139800.5 50 137910.0 51 135795.0 52 132890.0 53 129306.5 54 125456.5 55 118007.5 56 107382.0 57 96238.0 58 86775.5 59 75715.5 60 61935.0 61 51146.5 62 42261.0 63 31917.5 64 23057.5 65 17045.5 66 12663.5 67 9619.5 68 7261.0 69 5566.0 70 4239.5 71 3048.5 72 2158.0 73 1525.5 74 1113.0 75 812.5 76 535.5 77 321.5 78 196.0 79 112.0 80 67.5 81 43.5 82 27.5 83 22.5 84 16.5 85 10.0 86 9.5 87 5.5 88 4.5 89 4.0 90 1.5 91 1.5 92 3.0 93 3.5 94 2.0 95 0.5 96 1.0 97 2.0 98 1.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17074628705438127 2 1.5722494203902513E-4 3 0.011666090699295664 4 0.007358127287426375 5 0.027828814740907443 6 0.0023583741305853766 7 0.0 8 0.0 9 0.0 10-11 0.05163267096561585 12-13 3.458948724858553E-4 14-15 0.005628652924997099 16-17 1.5722494203902512E-5 18-19 0.0018866993044683016 20-21 2.987273898741477E-4 22-23 1.5722494203902512E-5 24-25 7.546797217873205E-4 26-27 0.00356900618428587 28-29 0.0065405575888234455 30-31 0.019322945376596186 32-33 0.01383579489943421 34-35 0.011461698274644931 36-37 0.004575245813335631 38-39 1.5722494203902512E-5 40-41 0.004150738469830263 42-43 0.010109563773109315 44-45 0.007751189642523939 46-47 0.004402298377092703 48-49 0.010534071116614682 50-51 0.0032860012886156247 52-53 0.0024998765784204993 54-55 0.005015475651044901 56-57 0.008238586962844916 58-59 0.01665012136193276 60-61 0.008034194538194183 62-63 0.023379348881203035 64-65 0.042293509408497756 66-67 0.06378615898523249 68-69 0.05251313064103439 70-71 0.0725907557394179 72-73 0.035532836900819674 74-75 0.02902372430040404 76-77 0.2371738250658694 78-79 0.08908365215931163 80-81 0.07027954909144424 82-83 0.029118059265627452 84-85 0.05413254754403635 86-87 0.07144301366253301 88-89 0.30555095235864144 90-91 0.30822377637330484 92-93 0.05504445220786269 94-95 0.011304473332605905 96-97 0.01639856145467032 98-99 8.961821696224432E-4 100-101 1.5722494203902513E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3180157.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.89151038618942 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55772904870376 45.08600295414812 2 12.92443982511154 15.222795643924725 3 4.432680689678425 7.831417826245746 4 2.0233114143527433 4.766234606914006 5 1.1206131761373046 3.299730125069539 6 0.6533222357707089 2.308507994005151 7 0.4681901942079068 1.9300699379434887 8 0.31615520162476923 1.4895085872106324 9 0.2359094268043228 1.2503756212962094 >10 1.1955691327385745 12.140821335145892 >50 0.05396101280402714 2.160525637299949 >100 0.016462002321099567 1.6262268506527362 >500 0.0011756798195445288 0.5169528022113776 >1k 4.8095992523102595E-4 0.37083007793249334 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 3.1444988407805024E-5 9 0.0 0.0 0.0 0.0 6.288997681561005E-5 10-11 0.0 0.0 0.0 0.0 9.433496522341507E-5 12-13 0.0 0.0 0.0 0.0 2.515599072624402E-4 14-15 0.0 0.0 0.0 0.0 3.7733986089366026E-4 16-17 0.0 0.0 0.0 0.0 4.402298377092703E-4 18-19 0.0 0.0 0.0 0.0 4.7167482611707535E-4 20-21 0.0 0.0 0.0 0.0 6.288997681561005E-4 22-23 0.0 1.5722494203902512E-5 0.0 0.0 6.288997681561005E-4 24-25 0.0 3.1444988407805024E-5 0.0 4.716748261170753E-5 6.288997681561005E-4 26-27 0.0 3.1444988407805024E-5 0.0 3.144498840780502E-4 6.603447565639055E-4 28-29 0.0 3.1444988407805024E-5 0.0 0.0012735220305161036 6.917897449717106E-4 30-31 0.0 3.1444988407805024E-5 0.0 0.006100327751114174 7.075122391756131E-4 32-33 0.0 3.1444988407805024E-5 0.0 0.02045496495927717 7.38957227583418E-4 34-35 3.1444988407805024E-5 3.1444988407805024E-5 0.0 0.04045397758664116 7.861247101951256E-4 36-37 3.1444988407805024E-5 4.716748261170753E-5 0.0 0.0763484318541506 7.861247101951256E-4 38-39 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.13559079001445526 8.175696986029306E-4 40-41 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.20211266299116679 8.175696986029306E-4 42-43 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.27440469134071055 8.490146870107357E-4 44-45 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.3649819804493929 8.961821696224432E-4 46-47 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.47337285549109687 9.905171348458582E-4 48-49 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.5865119237823793 0.0010376846174575659 50-51 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.703660228095657 0.0010376846174575659 52-53 3.1444988407805024E-5 6.288997681561005E-5 0.0 0.8280251572485258 0.0010848521000692735 54-55 6.288997681561005E-5 6.288997681561005E-5 0.0 0.968474197971987 0.0011320195826809809 56-57 6.288997681561005E-5 6.288997681561005E-5 0.0 1.1349125216144988 0.0011477420768848834 58-59 6.288997681561005E-5 6.288997681561005E-5 0.0 1.310690006814129 0.001163464571088786 60-61 6.288997681561005E-5 6.288997681561005E-5 0.0 1.497599017910122 0.001163464571088786 62-63 6.288997681561005E-5 6.288997681561005E-5 0.0 1.6924793335674937 0.001257799536312201 64-65 6.288997681561005E-5 6.288997681561005E-5 0.0 1.9086636288711532 0.001257799536312201 66-67 6.288997681561005E-5 6.288997681561005E-5 0.0 2.159594636365437 0.001257799536312201 68-69 6.288997681561005E-5 6.288997681561005E-5 0.0 2.437363941465783 0.001257799536312201 70-71 6.288997681561005E-5 6.288997681561005E-5 0.0 2.722365593899924 0.0012735220305161036 72-73 6.288997681561005E-5 6.288997681561005E-5 0.0 3.024536210004726 0.0013364120073317135 74-75 6.288997681561005E-5 6.288997681561005E-5 0.0 3.343828622297578 0.0013993019841473235 76-77 6.288997681561005E-5 6.288997681561005E-5 0.0 3.7016725903784 0.001446469466759031 78-79 6.288997681561005E-5 7.861247101951255E-5 0.0 4.101762900385107 0.0014621919609629336 80-81 6.288997681561005E-5 9.433496522341507E-5 0.0 4.5228584626482276 0.001509359443574641 82-83 6.288997681561005E-5 9.433496522341507E-5 0.0 4.962003448257429 0.0016036944087980563 84-85 6.288997681561005E-5 9.433496522341507E-5 0.0 5.432593422274435 0.0016036944087980563 86-87 6.288997681561005E-5 9.433496522341507E-5 0.0 5.933339140174526 0.0016665843856136662 88-89 6.288997681561005E-5 9.433496522341507E-5 0.0 6.479821593713769 0.0017766418450409838 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2425 0.0 46.271088 1 GTATCAA 4215 0.0 39.81865 1 TCAACGC 5070 0.0 32.109726 4 CAACGCA 5265 0.0 30.855083 5 ATCAACG 5340 0.0 30.486681 3 AACGCAG 5665 0.0 28.668314 6 TATCAAC 5770 0.0 28.461485 2 GTACATG 7740 0.0 24.817032 1 ACGCAGA 6705 0.0 23.937956 7 TACATGG 8135 0.0 23.046068 2 ACATGGG 8320 0.0 22.533625 3 CGCAGAG 7145 0.0 22.065052 8 CATGGGG 6795 0.0 20.81504 4 AGAGTAC 6865 0.0 18.26191 10-11 GCAGAGT 8455 0.0 17.804445 9 ATGGGGG 3865 0.0 16.222712 5 ACTATAC 795 0.0 16.119587 3 CAGAGTA 7530 0.0 16.081553 10-11 TAAGGTG 1600 0.0 16.03145 5 TAATACT 2575 0.0 15.667227 4 >>END_MODULE