##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921688_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3208978 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.105513032498198 31.0 31.0 34.0 26.0 34.0 2 30.16804945375132 31.0 31.0 34.0 26.0 34.0 3 30.228618270365207 31.0 31.0 34.0 26.0 34.0 4 33.67610435471979 37.0 35.0 37.0 28.0 37.0 5 33.66194096687481 37.0 35.0 37.0 28.0 37.0 6 33.697811577393175 37.0 35.0 37.0 28.0 37.0 7 33.60133600168029 37.0 35.0 37.0 28.0 37.0 8 33.57196621478863 37.0 35.0 37.0 28.0 37.0 9 35.10084861909306 39.0 35.0 39.0 28.0 39.0 10-11 34.99225797122947 39.0 35.0 39.0 27.5 39.0 12-13 34.875593880668546 39.0 35.0 39.0 27.0 39.0 14-15 35.9836430788868 40.0 36.0 41.0 27.0 41.0 16-17 35.913553941472955 40.0 36.0 41.0 27.0 41.0 18-19 35.87780050221597 40.0 36.0 41.0 27.0 41.0 20-21 35.7956593968547 40.0 36.0 41.0 27.0 41.0 22-23 35.69290331688157 40.0 36.0 41.0 26.5 41.0 24-25 35.57394192169595 40.0 36.0 41.0 26.0 41.0 26-27 35.42447221514139 40.0 36.0 41.0 25.0 41.0 28-29 35.2850215863119 40.0 35.5 41.0 24.5 41.0 30-31 35.13441522503426 39.0 35.0 41.0 24.0 41.0 32-33 34.957844366648814 39.0 35.0 41.0 24.0 41.0 34-35 34.78230078236747 39.0 35.0 41.0 23.0 41.0 36-37 34.74985166616911 39.0 35.0 41.0 22.5 41.0 38-39 34.93201714065974 39.0 35.0 41.0 23.5 41.0 40-41 34.99551368067964 40.0 35.0 41.0 23.0 41.0 42-43 34.83702583813289 40.0 35.0 41.0 22.0 41.0 44-45 34.710634039871884 39.5 35.0 41.0 20.5 41.0 46-47 34.55419949903053 39.0 35.0 41.0 19.5 41.0 48-49 34.38871145268057 39.0 34.5 41.0 17.5 41.0 50-51 32.69687124685804 37.0 32.0 39.5 14.0 40.0 52-53 32.811049343435826 37.5 32.5 39.5 13.0 40.0 54-55 33.71658484414664 38.0 33.5 40.0 13.0 41.0 56-57 33.72804347677048 38.0 34.0 41.0 12.5 41.0 58-59 33.53284269945135 38.0 33.5 40.5 9.0 41.0 60-61 33.272775163930696 37.5 33.0 40.0 8.0 41.0 62-63 32.977512310773086 37.0 33.0 40.0 6.5 41.0 64-65 32.683081342408705 36.5 33.0 40.0 2.0 41.0 66-67 32.33670891480091 36.0 32.5 39.0 2.0 41.0 68-69 31.969824660686363 35.5 32.0 39.0 2.0 41.0 70-71 31.564925188019366 35.0 32.0 38.5 2.0 40.0 72-73 31.204721253931936 35.0 32.0 37.0 2.0 39.5 74-75 30.80805368562826 35.0 31.0 37.0 2.0 39.0 76-77 30.44342108297408 35.0 31.0 36.0 2.0 39.0 78-79 30.108018191461582 35.0 31.0 36.0 2.0 37.5 80-81 29.807663062819376 35.0 31.0 35.5 2.0 37.0 82-83 29.50952593006247 35.0 30.0 35.0 2.0 37.0 84-85 29.261150278998485 35.0 30.0 35.0 2.0 36.0 86-87 29.0391255409043 34.5 30.0 35.0 2.0 36.0 88-89 28.82433986770866 34.0 30.0 35.0 2.0 36.0 90-91 28.609192552893788 34.0 30.0 35.0 2.0 35.0 92-93 28.424723852890235 34.0 29.0 35.0 2.0 35.0 94-95 28.2033106802228 34.0 29.0 35.0 2.0 35.0 96-97 27.971507283627375 34.0 29.0 35.0 2.0 35.0 98-99 27.70593005000346 34.0 29.0 35.0 2.0 35.0 100-101 26.63210062518347 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 127459.0 3 21298.0 4 14290.0 5 11006.0 6 9955.0 7 10131.0 8 10770.0 9 11370.0 10 12228.0 11 12893.0 12 13033.0 13 13027.0 14 13756.0 15 14102.0 16 14068.0 17 14900.0 18 14313.0 19 13812.0 20 14100.0 21 14765.0 22 16259.0 23 18813.0 24 21588.0 25 25364.0 26 30362.0 27 35926.0 28 42513.0 29 49582.0 30 59513.0 31 72186.0 32 90216.0 33 116217.0 34 159720.0 35 231624.0 36 384144.0 37 680343.0 38 685007.0 39 108318.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.030288886207465 17.904316128869322 12.979378900733932 25.086016084189282 2 16.0398688917234 19.420834489834743 39.08900954620444 25.450287072237415 3 18.777632073397584 23.83703216289923 29.239438728016353 28.145897035686833 4 13.388285990409274 15.742776159087443 36.14466736043565 34.72427049006764 5 14.578644668963275 36.92631719440095 34.18794490013126 14.307093236504521 6 33.94040049852726 34.838441450939975 17.147642420443983 14.073515630088782 7 29.23165389596122 31.293480005547735 21.281994941585126 18.19287115690592 8 26.88617144224979 34.373819506520995 19.98869219711732 18.751316854111888 9 27.081964045581113 15.230687004582732 19.171555588797627 38.515793361038526 10-11 25.8522707793499 24.838057487721855 27.90818644956314 21.401485283365112 12-13 26.369479899520197 22.353249026637 27.59535154682974 23.681919527013065 14-15 23.703622532254435 23.88015311475548 24.626444920353922 27.789779432636163 16-17 24.035606643655825 26.72128546504687 25.46656803986717 23.776539851430133 18-19 24.03245564183168 26.31615936481213 26.46285769404999 23.188527299306198 20-21 24.60677092099636 25.558752463915557 26.238176010532655 23.596300604555424 22-23 24.490295665923256 25.320225255023626 26.00608153648267 24.183397542570443 24-25 24.29300587379661 25.497271343715923 25.99851736669861 24.21120541578886 26-27 24.08315097990842 25.669014079019487 26.000764583066122 24.247070358005967 28-29 24.25873041152434 25.78134958640621 25.853499815962373 24.106420186107076 30-31 24.5399763447127 25.588024004350828 25.668028118313835 24.20397153262264 32-33 24.29643965742922 25.695130084645402 25.558547440068814 24.449882817856565 34-35 24.602794942402074 25.659234803334336 25.63452148407066 24.10344877019293 36-37 24.68543073960451 25.442640688087682 25.70213354735963 24.16979502494818 38-39 24.4495144876172 25.60749233403551 25.654814930006342 24.288178248340945 40-41 24.63086639702356 25.46413402835148 25.732992867099437 24.172006707525522 42-43 24.474117886122354 25.428926784552058 25.580056831520142 24.516898497805446 44-45 24.3474825827767 25.469913717995556 25.741328861533464 24.441274837694273 46-47 24.552903544651873 25.452975451093863 25.56093661068478 24.433184393569487 48-49 24.272067833781747 25.56785947021177 25.59906041129961 24.56101228470687 50-51 24.29798669916379 25.570889622046828 25.758358617288902 24.37276506150048 52-53 24.575544915939748 25.42159737903163 25.685052797271595 24.31780490775703 54-55 24.148693637141555 25.325450809176708 25.924447692394175 24.601407861287562 56-57 24.222579509747796 25.473366932102564 25.79636235076453 24.507691207385108 58-59 24.343325874534763 25.27778402467775 25.80191454990461 24.576975550882874 60-61 24.276282591003202 25.352079900307345 25.93870663493719 24.43293087375226 62-63 24.313433635236343 25.342925980018844 25.94863187981511 24.395008504929706 64-65 24.141101501906096 25.240723312204118 25.861920080625506 24.756255105264284 66-67 24.178419004277874 25.285831799423995 25.768693134228048 24.767056062070083 68-69 24.162651260832227 25.269700991490357 25.852322585681943 24.715325161995473 70-71 24.12052008686329 25.084609587468055 25.845654813492008 24.949215512176647 72-73 24.05915302809733 25.237910166183052 25.771747085468714 24.931189720250906 74-75 24.06335524007502 25.322890090969008 25.80061830632036 24.81313636263561 76-77 24.114868319873217 25.002181982832987 25.926749392050404 24.956200305243396 78-79 24.0075222032897 25.059628078207304 25.958332103526182 24.97451761497682 80-81 24.110644033489024 25.165168729730215 25.79301372312753 24.931173513653235 82-83 24.08678626795683 25.173012461270357 25.892831763010648 24.84736950776217 84-85 24.019580436180703 25.16583306341309 25.894492783680974 24.920093716725237 86-87 23.975798917068396 25.203660841804915 25.89454015083813 24.926000090288557 88-89 23.849060387809384 24.984782738744656 25.974697408059548 25.191459465386412 90-91 23.859629665499284 24.988550059514697 26.03297832790255 25.11884194708347 92-93 23.990223851129127 24.80278383133566 26.1451533493947 25.061838968140513 94-95 23.839758245901944 24.73782298535258 26.183008514534095 25.239410254211382 96-97 23.844995438469326 24.57999550095605 26.238080657860202 25.336928402714427 98-99 23.702119437205642 24.556092536506295 26.13466969891942 25.607118327368646 100-101 23.82399167429393 24.479381708222554 26.25274960285901 25.443877014624505 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 44.5 2 65.0 3 84.0 4 74.5 5 83.0 6 137.5 7 303.5 8 475.5 9 517.5 10 465.5 11 436.0 12 478.5 13 552.5 14 661.5 15 761.0 16 852.5 17 949.0 18 1053.0 19 1129.0 20 1234.5 21 1379.5 22 1472.0 23 1645.5 24 1764.5 25 1984.0 26 2481.5 27 3127.5 28 4103.0 29 5652.0 30 8391.5 31 12393.0 32 18085.0 33 23968.5 34 29960.5 35 37528.5 36 46889.5 37 56877.5 38 66546.5 39 75840.5 40 83826.5 41 91553.5 42 100023.0 43 108860.5 44 116960.0 45 125106.0 46 131080.0 47 135577.5 48 140945.5 49 144167.5 50 144049.5 51 143544.0 52 143299.5 53 142456.0 54 140671.0 55 134758.5 56 125279.0 57 113467.0 58 102402.0 59 89946.5 60 74351.0 61 61515.0 62 50880.0 63 39291.5 64 28653.0 65 21034.5 66 15842.0 67 12384.5 68 9373.5 69 7062.0 70 5404.5 71 3901.0 72 2833.5 73 2132.5 74 1600.5 75 1154.5 76 812.0 77 553.0 78 368.0 79 250.5 80 190.0 81 162.0 82 125.0 83 99.0 84 84.0 85 68.0 86 56.0 87 47.5 88 51.5 89 44.5 90 32.0 91 31.0 92 27.0 93 24.0 94 21.5 95 17.5 96 15.5 97 12.5 98 9.0 99 7.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05388008269299446 2 0.076909221565246 3 0.07270227468059924 4 0.07288925009769465 5 0.06914974175578642 6 0.010190160231699935 7 0.0144282696858626 8 0.017887314902127718 9 0.006014375916569076 10-11 0.01346223003086964 12-13 0.0240263410967604 14-15 0.04108784790671672 16-17 0.0288253768022093 18-19 0.010984805754355436 20-21 0.020878921575654304 22-23 0.03851693592165481 24-25 0.036522531472637086 26-27 0.021611241959278 28-29 0.01230921495878127 30-31 0.012246889819749467 32-33 0.00928644571573878 34-35 0.005671587651894155 36-37 8.258080921714016E-4 38-39 0.004721129281659145 40-41 0.0014023156282155877 42-43 0.241868283297673 44-45 0.20841526492235224 46-47 0.2150373109444814 48-49 0.22285911589297278 50-51 0.21341685732965449 52-53 0.22150354411903106 54-55 0.21682915869164573 56-57 0.2204751793250063 58-59 0.23029138872251537 60-61 0.23491903029562683 62-63 0.21849635616074653 64-65 0.2185586812997783 66-67 0.21564498105004146 68-69 0.2096617677029883 70-71 0.20176205633070715 72-73 0.21428940927609974 74-75 0.21326104448207497 76-77 0.20615597863244936 78-79 0.22613118569214247 80-81 0.2377859866910898 82-83 0.23742761714165694 84-85 0.23107045296041295 86-87 0.2533361088795249 88-89 0.24442361399797694 90-91 0.252042862244615 92-93 0.24686987570497523 94-95 0.2505314776230937 96-97 0.25858700184295436 98-99 0.2510924038743799 100-101 0.25829095743255326 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3208978.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.478052186475246 #Duplication Level Percentage of deduplicated Percentage of total 1 78.37949290512915 45.83480076455609 2 11.461292408718654 13.40468111203004 3 3.998815801409118 7.0152887735671285 4 1.8796518534453104 4.396735167127192 5 1.0937975568605338 3.198157530576471 6 0.6777315258394917 2.377945172187678 7 0.46524186525852196 1.9044506653144655 8 0.34628204275502633 1.6199919493974146 9 0.2484380690146234 1.3075356928449857 >10 1.3671647170953363 14.14227431081781 >50 0.06352482978338567 2.4886965405935415 >100 0.017335371518029666 1.6261671966981643 >500 8.563848161987984E-4 0.37857135280090687 >1k 3.7466835661051215E-4 0.304703771488035 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.1162569515901944E-5 2 0.0 0.0 0.0 0.0 3.1162569515901944E-5 3 0.0 0.0 0.0 0.0 3.1162569515901944E-5 4 0.0 0.0 0.0 0.0 3.1162569515901944E-5 5 0.0 0.0 0.0 0.0 3.1162569515901944E-5 6 0.0 0.0 0.0 0.0 9.348770854770584E-5 7 0.0 0.0 0.0 0.0 9.348770854770584E-5 8 0.0 0.0 0.0 0.0 1.5581284757950974E-4 9 0.0 0.0 0.0 0.0 2.1813798661131365E-4 10-11 0.0 0.0 0.0 0.0 2.1813798661131365E-4 12-13 0.0 0.0 0.0 0.0 2.4930055612721556E-4 14-15 0.0 0.0 0.0 0.0 2.9604441040106846E-4 16-17 0.0 0.0 0.0 3.1162569515901944E-5 3.583695494328724E-4 18-19 0.0 0.0 0.0 3.1162569515901944E-5 4.362759732226273E-4 20-21 0.0 0.0 0.0 3.1162569515901944E-5 4.6743854273852923E-4 22-23 0.0 0.0 0.0 6.232513903180389E-5 5.453449665282841E-4 24-25 0.0 0.0 0.0 1.713941323374607E-4 6.855765293498428E-4 26-27 0.0 0.0 0.0 5.141823970123821E-4 7.790642378975487E-4 28-29 0.0 0.0 0.0 0.0021190547270813326 7.946455226554997E-4 30-31 0.0 0.0 0.0 0.009411095993802389 8.102268074134506E-4 32-33 0.0 0.0 0.0 0.02944862819252734 9.348770854770585E-4 34-35 0.0 0.0 0.0 0.05509542290411464 0.0010283647940247643 36-37 0.0 0.0 0.0 0.09886325178919893 0.0010283647940247643 38-39 0.0 4.674385427385292E-5 0.0 0.17463503956711451 0.0010595273635406663 40-41 0.0 6.232513903180389E-5 0.0 0.2604255934443926 0.0010751086482986172 42-43 0.0 6.232513903180389E-5 0.0 0.34990891180930506 0.0010906899330565681 44-45 0.0 6.232513903180389E-5 0.0 0.4584169788636756 0.0011218525025724702 46-47 0.0 6.232513903180389E-5 0.0 0.5888479135724832 0.001215340211120176 48-49 0.0 6.232513903180389E-5 0.0 0.7224262678023969 0.0012776653501519798 50-51 0.0 6.232513903180389E-5 0.0 0.8670984967799718 0.0013088279196678818 52-53 0.0 7.790642378975487E-5 0.0 1.0155258153842128 0.0014646407672473916 54-55 0.0 9.348770854770584E-5 0.0 1.180110926282449 0.0016671974691007542 56-57 0.0 1.0906899330565681E-4 0.0 1.3790527700719668 0.001682778753858705 58-59 0.0 1.5581284757950974E-4 0.0 1.5899454592708333 0.0016983600386166562 60-61 0.0 1.5581284757950974E-4 0.0 1.814721073189034 0.0017918477471643621 62-63 0.0 1.5581284757950974E-4 0.0 2.041880623675201 0.0019320793099859208 64-65 0.0 1.5581284757950974E-4 0.0 2.2878467848642154 0.0019476605947438717 66-67 0.0 1.5581284757950974E-4 0.0 2.5713482610351335 0.0019788231642597735 68-69 0.0 1.5581284757950974E-4 0.0 2.888333918150888 0.0019944044490177244 70-71 0.0 1.713941323374607E-4 0.0 3.2200750519324224 0.0020567295880495285 72-73 0.0 1.8697541709541168E-4 0.0 3.561102631429695 0.0021346360118392835 74-75 0.0 1.8697541709541168E-4 0.0 3.924785398965029 0.0021657985813551854 76-77 0.0 1.8697541709541168E-4 0.0 4.330771354618199 0.002212542435629038 78-79 0.0 1.8697541709541168E-4 0.0 4.7781567838732455 0.002212542435629038 80-81 0.0 1.8697541709541168E-4 0.0 5.247106711233296 0.002259286289902891 82-83 0.0 1.8697541709541168E-4 0.0 5.737667880552625 0.002383936567966499 84-85 0.0 1.8697541709541168E-4 0.0 6.242594994418784 0.00239951785272445 86-87 0.0 1.8697541709541168E-4 0.0 6.789046232164882 0.00239951785272445 88-89 0.0 1.8697541709541168E-4 0.0 7.375556953023674 0.00239951785272445 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2430 0.0 49.21292 1 GTATCAA 4190 0.0 42.132168 1 TCAACGC 5145 0.0 33.300236 4 ATCAACG 5295 0.0 32.356384 3 CAACGCA 5275 0.0 32.297108 5 TATCAAC 5555 0.0 30.92787 2 AACGCAG 5675 0.0 29.920704 6 GTACATG 9155 0.0 28.509476 1 TACATGG 9530 0.0 26.991804 2 ACATGGG 9820 0.0 25.710993 3 ACGCAGA 6695 0.0 24.516666 7 CGCAGAG 6960 0.0 23.244577 8 CATGGGG 8540 0.0 22.284966 4 TAAGGCG 860 0.0 22.072584 5 GTATTAA 1670 0.0 20.74394 1 TATTAAG 1370 0.0 19.746029 2 GTATTAG 745 0.0 19.109524 1 GCAGAGT 8190 0.0 18.653574 9 AGAGTAC 6600 0.0 18.29535 10-11 GAGTACA 6620 0.0 17.992876 1 >>END_MODULE