##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921688_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3208978 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300243878269033 33.0 31.0 34.0 28.0 34.0 2 31.43145356559004 34.0 31.0 34.0 28.0 34.0 3 31.504270206900763 34.0 31.0 34.0 28.0 34.0 4 34.98583598890363 37.0 35.0 37.0 32.0 37.0 5 34.72236363103767 37.0 35.0 37.0 32.0 37.0 6 34.69266819529458 37.0 35.0 37.0 32.0 37.0 7 34.57197618681088 37.0 35.0 37.0 32.0 37.0 8 34.51607832774173 37.0 35.0 37.0 31.0 37.0 9 36.09568248831871 39.0 37.0 39.0 31.0 39.0 10-11 35.98302855301594 39.0 37.0 39.0 31.0 39.0 12-13 35.90780678458998 39.0 37.0 39.0 30.5 39.0 14-15 37.13719305648091 40.0 38.0 41.0 31.0 41.0 16-17 37.09710786424837 40.0 38.0 41.0 31.0 41.0 18-19 37.055408762540594 40.0 38.0 41.0 31.0 41.0 20-21 36.99509937431793 40.0 37.5 41.0 31.0 41.0 22-23 36.904636616393134 40.0 37.0 41.0 30.0 41.0 24-25 36.815154544531 40.0 37.0 41.0 30.0 41.0 26-27 36.68702403070385 40.0 37.0 41.0 30.0 41.0 28-29 36.56461636695546 40.0 37.0 41.0 30.0 41.0 30-31 36.411792633043916 40.0 37.0 41.0 29.5 41.0 32-33 36.36346774580568 40.0 36.5 41.0 29.5 41.0 34-35 36.50115426157487 40.0 37.0 41.0 30.0 41.0 36-37 36.49647816220616 40.0 37.0 41.0 30.0 41.0 38-39 36.39232973862707 40.0 37.0 41.0 30.0 41.0 40-41 36.31068598787527 40.0 37.0 41.0 29.0 41.0 42-43 36.191106171497594 40.0 36.0 41.0 29.0 41.0 44-45 36.060818117170015 40.0 36.0 41.0 28.0 41.0 46-47 35.90263239573471 40.0 36.0 41.0 28.0 41.0 48-49 35.762286933721576 40.0 35.0 41.0 27.5 41.0 50-51 35.599880553871046 39.5 35.0 41.0 27.0 41.0 52-53 35.420497741025336 39.0 35.0 41.0 26.5 41.0 54-55 35.199077089341216 39.0 35.0 41.0 26.0 41.0 56-57 34.96508109435465 39.0 35.0 41.0 26.0 41.0 58-59 34.713192175203446 38.0 35.0 40.0 26.0 41.0 60-61 34.427181021496565 38.0 34.0 40.0 25.0 41.0 62-63 34.114431604080806 37.0 34.0 40.0 24.5 41.0 64-65 33.771655648620836 37.0 34.0 40.0 23.5 41.0 66-67 33.417270856951966 36.0 34.0 39.0 23.0 41.0 68-69 33.050056902851935 36.0 33.0 39.0 22.0 40.5 70-71 32.65246022253814 35.0 33.0 38.5 21.5 40.0 72-73 32.293377829327596 35.0 33.0 37.0 20.5 39.5 74-75 31.892786270270474 35.0 32.5 37.0 19.5 39.0 76-77 29.201578041357713 33.0 28.5 34.5 13.0 36.5 78-79 30.770824698704697 34.5 31.5 35.5 15.0 37.0 80-81 30.960189194192044 35.0 32.0 35.0 17.0 37.0 82-83 30.793926602176768 35.0 32.0 35.0 15.0 37.0 84-85 30.60610699107317 35.0 32.0 35.0 12.0 36.0 86-87 30.40825396746254 35.0 32.0 35.0 7.5 36.0 88-89 30.146397856264517 35.0 31.5 35.0 2.0 35.5 90-91 29.950602185493324 34.0 31.0 35.0 2.0 35.0 92-93 29.795101119421822 34.0 31.0 35.0 2.0 35.0 94-95 29.687608328882277 34.0 31.0 35.0 2.0 35.0 96-97 29.484365583061024 34.0 31.0 35.0 2.0 35.0 98-99 29.280530904231817 34.0 31.0 35.0 2.0 35.0 100-101 28.155399164469188 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65181.0 3 21139.0 4 11617.0 5 8377.0 6 7069.0 7 7031.0 8 7555.0 9 8207.0 10 9061.0 11 9594.0 12 10175.0 13 10575.0 14 11602.0 15 12255.0 16 13047.0 17 13712.0 18 12967.0 19 12144.0 20 11628.0 21 11628.0 22 12365.0 23 13986.0 24 16793.0 25 20345.0 26 23900.0 27 29347.0 28 34907.0 29 42431.0 30 51751.0 31 64313.0 32 81437.0 33 107765.0 34 155165.0 35 231036.0 36 407708.0 37 780158.0 38 774727.0 39 86280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.7939633959238 19.42648765125145 13.574461616164454 26.20508733666029 2 15.115962370503699 20.8072554076508 37.4131030124289 26.663679209416596 3 17.430243962642198 24.981339486705767 29.01780719412263 28.570609356529403 4 13.081429956026764 16.908098741885517 35.10008507932946 34.910386222758255 5 14.381617742633809 37.27038465003209 34.14246336736866 14.205534239965436 6 33.962479942484904 35.36274302353737 16.84338886539518 13.831388168582537 7 29.066575090262383 31.561294592857912 21.228253979927565 18.14387633695214 8 26.909782491497293 34.74349154154376 19.7822795918202 18.56444637513875 9 26.927732131538452 15.196925625541837 19.03964439768674 38.83569784523297 10-11 25.780619120101917 25.104121002978808 27.808694844240968 21.30656503267831 12-13 26.264763895314026 22.560115501289587 27.570043146263355 23.60507745713303 14-15 23.60812758564272 24.021098065491262 24.591852157721284 27.778922191144733 16-17 23.988057880110116 26.95574728153325 25.355767474878295 23.70042736347834 18-19 24.014082027153744 26.46341611629857 26.3967268666991 23.125774989848587 20-21 24.59606235390575 25.660982501255074 26.225524490234104 23.51743065460507 22-23 24.4221992173209 25.403742250648026 25.985313704238543 24.188744827792526 24-25 24.279036763854634 25.645525870038316 25.88337599781362 24.192061368293434 26-27 24.056943339003027 25.82960564983231 25.95176688146683 24.161684129697832 28-29 24.19116254971699 25.901076341141323 25.87295045246842 24.034810656673276 30-31 24.43947278525674 25.71008737043418 25.65008876676532 24.200351077543754 32-33 24.253649822148795 25.775724533680155 25.51656012424184 24.454065519929216 34-35 24.478136084319758 25.827304564577613 25.644797504739543 24.049761846363086 36-37 24.559020021986086 25.62130172904758 25.70824883388818 24.111429415078156 38-39 24.444636267372353 25.721631622279737 25.637648497434384 24.19608361291352 40-41 24.548654783704578 25.57280610012553 25.717452846064575 24.161086270105322 42-43 24.387080970198795 25.544292293797227 25.57336983452916 24.49525690147482 44-45 24.31086778169851 25.550175264181828 25.70155926297886 24.437397691140802 46-47 24.48319045488776 25.611944977735767 25.52833237738234 24.37653218999413 48-49 24.19947286521163 25.678934585608292 25.623304007552044 24.498288541628035 50-51 24.275136044436714 25.663019909139578 25.680518237215626 24.38132580920808 52-53 24.53212527600982 25.488668463648818 25.597568760744537 24.381637499596824 54-55 24.069655142969243 25.480618055700553 25.79102646846817 24.65870033286203 56-57 24.186316054213705 25.551802921361833 25.677086953039368 24.584794071385097 58-59 24.23901140557608 25.41994645742081 25.71920082269627 24.62184131430685 60-61 24.217153285808937 25.515498616590072 25.823657151191526 24.44369094640946 62-63 24.149719022411816 25.542185911815835 25.794892750376135 24.513202315396214 64-65 24.018544220690067 25.33123586986748 25.724089405315485 24.926130504126963 66-67 24.02920995818975 25.50347467725562 25.58395516541453 24.883360199140096 68-69 24.078168849628927 25.44123025349051 25.673993300988762 24.806607595891798 70-71 23.987448253280217 25.30903024113387 25.65407074195636 25.04945076362956 72-73 23.991110056767763 25.51318317980844 25.488353809640564 25.007352953783236 74-75 24.014121846750033 25.558924826975893 25.484721542081722 24.942231784192348 76-77 24.007338448861688 25.214540461422075 25.65794282294454 25.120178266771703 78-79 23.91734117684853 25.278728145378874 25.718343012189916 25.085587665582675 80-81 24.09346532899751 25.3706063293555 25.490727123724415 25.045201217922568 82-83 24.035783958999847 25.385716808358133 25.54529796665332 25.0332012659887 84-85 23.9311694432012 25.37227668348598 25.56307428104818 25.133479592264646 86-87 23.907472087781116 25.44982224461218 25.49034557717995 25.15236009042675 88-89 23.76647612963436 25.2446044806884 25.56511800242096 25.423801387256283 90-91 23.698946079358326 25.29068849751531 25.611890652803176 25.398474770323194 92-93 23.805057032033254 25.082106266796767 25.72144933559673 25.391387365573255 94-95 23.664834071467006 25.02153939555057 25.725806338511564 25.58782019447086 96-97 23.615469114583732 24.949801254263484 25.76593117679885 25.66879845435393 98-99 23.454070871913004 24.865703483762882 25.67314979631929 26.007075848004828 100-101 23.419570765697404 24.907384612508064 25.714949033490498 25.958095588304037 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 44.5 2 54.0 3 68.0 4 60.5 5 72.0 6 111.0 7 258.5 8 395.5 9 422.5 10 370.5 11 302.5 12 307.5 13 331.5 14 357.5 15 411.5 16 472.5 17 491.0 18 561.5 19 657.0 20 702.5 21 802.5 22 914.5 23 1104.0 24 1359.0 25 1675.0 26 2182.0 27 2940.5 28 4106.5 29 5793.0 30 8645.0 31 12859.0 32 18747.5 33 24588.0 34 30398.0 35 37690.5 36 47256.5 37 57267.5 38 66397.0 39 75502.0 40 83490.5 41 91313.0 42 99872.0 43 108843.0 44 117010.5 45 124921.0 46 131159.5 47 136082.0 48 141900.0 49 145398.0 50 145402.5 51 144676.0 52 144218.0 53 144355.0 54 143106.5 55 136638.0 56 126638.5 57 114508.5 58 103003.0 59 89973.0 60 73979.5 61 61091.0 62 50365.0 63 38576.0 64 27606.0 65 19958.0 66 14888.0 67 11572.0 68 8797.0 69 6561.0 70 4924.0 71 3501.5 72 2443.5 73 1793.0 74 1338.5 75 899.0 76 609.5 77 359.0 78 193.0 79 111.5 80 60.5 81 37.0 82 32.5 83 21.5 84 12.5 85 10.5 86 5.5 87 2.5 88 2.0 89 4.0 90 3.5 91 0.5 92 0.5 93 1.0 94 1.0 95 1.0 96 0.5 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16999181670924512 2 1.8697541709541168E-4 3 0.010314810509763545 4 0.006481814459307606 5 0.026207720962873538 6 0.0025241681307880577 7 0.0 8 0.0 9 0.0 10-11 0.05148056484027001 12-13 2.9604441040106846E-4 14-15 0.004767873135932998 16-17 0.0 18-19 0.0020255670185336267 20-21 1.5581284757950974E-4 22-23 0.0 24-25 7.634829531395976E-4 26-27 0.003240907229653803 28-29 0.005936469492779321 30-31 0.01776266462406411 32-33 0.012371540097813074 34-35 0.010439460787827152 36-37 0.004066715321825204 38-39 0.0 40-41 0.003926483759003645 42-43 0.009847371967025016 44-45 0.007806223663733437 46-47 0.004097877891341106 48-49 0.009691559119445506 50-51 0.0031162569515901946 52-53 0.002477424276514205 54-55 0.004393922301742174 56-57 0.008382731199777624 58-59 0.01569035375125663 60-61 0.007479016683816467 62-63 0.022281237203869892 64-65 0.04032436495357712 66-67 0.061997932051886924 68-69 0.05107545143656329 70-71 0.0702092691193271 72-73 0.033764644070479764 74-75 0.02801514999479585 76-77 0.23322067025701018 78-79 0.08608659828767913 80-81 0.0687446283520797 82-83 0.02781259329294249 84-85 0.05149614612502797 86-87 0.0680434705379719 88-89 0.29370721768737584 90-91 0.29888020422701556 92-93 0.05302311203130716 94-95 0.010049928668878378 96-97 0.015004777221906787 98-99 0.0010595273635406663 100-101 2.4930055612721556E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3208978.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.17433816011831 #Duplication Level Percentage of deduplicated Percentage of total 1 77.2331987764383 44.15757024031719 2 12.171754858174683 13.918240565266842 3 4.154770012478387 7.126386770128747 4 1.9354285955990238 4.426273960381658 5 1.10763319148328 3.1664097323618066 6 0.7168593275193192 2.459157456289474 7 0.4969117424590349 1.9887419999360536 8 0.3508166500337137 1.604616782498194 9 0.2765092163835424 1.422830829771178 >10 1.4686806331593503 14.789390285198827 >50 0.06883097011256395 2.6448766147825253 >100 0.017131009977430067 1.5616196131747921 >500 0.0010926045791579944 0.43743877802546816 >1k 3.824116022079579E-4 0.2964463718672288 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.1162569515901944E-5 5 0.0 3.1162569515901944E-5 0.0 0.0 3.1162569515901944E-5 6 0.0 3.1162569515901944E-5 0.0 0.0 3.1162569515901944E-5 7 0.0 3.1162569515901944E-5 0.0 0.0 3.1162569515901944E-5 8 0.0 3.1162569515901944E-5 0.0 0.0 3.1162569515901944E-5 9 0.0 3.1162569515901944E-5 0.0 0.0 6.232513903180389E-5 10-11 0.0 3.1162569515901944E-5 0.0 0.0 6.232513903180389E-5 12-13 0.0 4.674385427385292E-5 0.0 0.0 1.5581284757950974E-4 14-15 0.0 6.232513903180389E-5 0.0 0.0 2.1813798661131362E-4 16-17 0.0 6.232513903180389E-5 0.0 3.1162569515901944E-5 2.4930055612721556E-4 18-19 0.0 9.348770854770584E-5 0.0 3.1162569515901944E-5 3.116256951590195E-4 20-21 0.0 9.348770854770584E-5 0.0 3.1162569515901944E-5 3.116256951590195E-4 22-23 0.0 9.348770854770584E-5 0.0 9.348770854770584E-5 3.583695494328724E-4 24-25 0.0 9.348770854770584E-5 0.0 2.0255670185336265E-4 4.5185725798057826E-4 26-27 0.0 9.348770854770584E-5 0.0 6.07670105560088E-4 4.830198274964802E-4 28-29 0.0 9.348770854770584E-5 0.0 0.0023683552832085477 4.986011122544311E-4 30-31 0.0 9.348770854770584E-5 0.0 0.009894115821298868 4.986011122544311E-4 32-33 0.0 9.348770854770584E-5 0.0 0.030414667847520303 4.986011122544311E-4 34-35 0.0 9.348770854770584E-5 0.0 0.05680936422748925 5.297636817703332E-4 36-37 0.0 1.0906899330565681E-4 0.0 0.10173020818466191 5.453449665282842E-4 38-39 0.0 1.2465027806360778E-4 0.0 0.17818757249192735 5.92088820802137E-4 40-41 0.0 1.2465027806360778E-4 0.0 0.2653336981431471 5.92088820802137E-4 42-43 0.0 1.2465027806360778E-4 0.0 0.35568956845450483 6.076701055600881E-4 44-45 0.0 1.2465027806360778E-4 0.0 0.4655064634285433 6.699952445918919E-4 46-47 0.0 1.2465027806360778E-4 0.0 0.5977448271692731 7.167390988657448E-4 48-49 0.0 1.2465027806360778E-4 0.0 0.7326943344578867 7.479016683816467E-4 50-51 0.0 1.2465027806360778E-4 0.0 0.8788467854874666 7.790642378975487E-4 52-53 0.0 1.2465027806360778E-4 0.0 1.0283647940247644 9.660396549929604E-4 54-55 0.0 1.2465027806360778E-4 0.0 1.1949443093720182 0.0011218525025724702 56-57 0.0 1.2465027806360778E-4 0.0 1.3944159168433066 0.0011218525025724702 58-59 0.0 1.8697541709541168E-4 1.5581284757950972E-5 1.6054332563202365 0.0011218525025724702 60-61 0.0 1.8697541709541168E-4 3.1162569515901944E-5 1.8313774665952836 0.001153015072088372 62-63 0.0 1.8697541709541168E-4 3.1162569515901944E-5 2.060266539689583 0.001215340211120176 64-65 0.0 1.8697541709541168E-4 3.1162569515901944E-5 2.30727664695738 0.001215340211120176 66-67 0.0 1.8697541709541168E-4 3.1162569515901944E-5 2.592320670319335 0.001246502780636078 68-69 0.0 1.8697541709541168E-4 3.1162569515901944E-5 2.910957943619433 0.0012776653501519798 70-71 0.0 1.8697541709541168E-4 3.1162569515901944E-5 3.2444130187243414 0.0014490594824894407 72-73 0.0 1.8697541709541168E-4 3.1162569515901944E-5 3.5882763920475615 0.0016671974691007542 74-75 0.0 1.8697541709541168E-4 3.1162569515901944E-5 3.955636342785772 0.001682778753858705 76-77 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 4.366514821852939 0.001682778753858705 78-79 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 4.8186525429591605 0.0017139413233746071 80-81 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 5.293055919984493 0.001729522608132558 82-83 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 5.790270297895467 0.0017451038928905092 84-85 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 6.303922931226079 0.0017451038928905092 86-87 3.1162569515901944E-5 1.8697541709541168E-4 3.1162569515901944E-5 6.8575415599608345 0.0017918477471643621 88-89 3.1162569515901944E-5 2.0255670185336265E-4 3.1162569515901944E-5 7.450798977119819 0.0018385916014382149 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2165 0.0 43.68665 1 GTATCAA 4025 0.0 42.982243 1 TCAACGC 4970 0.0 33.994106 4 CAACGCA 5210 0.0 32.45497 5 ATCAACG 5330 0.0 31.608046 3 TATCAAC 5355 0.0 31.5491 2 AACGCAG 5460 0.0 31.051083 6 GTACATG 8985 0.0 27.824106 1 TACATGG 9350 0.0 26.088432 2 ACATGGG 9695 0.0 24.670572 3 ACGCAGA 6775 0.0 24.532375 7 CATGGGG 8260 0.0 22.292648 4 CGCAGAG 7380 0.0 22.19952 8 TAAGGTG 1630 0.0 20.689009 5 TAAGGCG 850 0.0 20.675297 5 TATACCG 310 2.6011548E-10 19.918222 5 ATGGGGG 4685 0.0 19.363895 5 GCAGAGT 8425 0.0 18.713242 9 AGAGTAC 7010 0.0 18.256672 10-11 GTATAGC 790 0.0 18.048775 1 >>END_MODULE