##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921687_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3753793 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.440322361941643 33.0 31.0 34.0 29.0 34.0 2 31.573350475106114 34.0 31.0 34.0 29.0 34.0 3 31.64921747150149 34.0 31.0 34.0 28.0 34.0 4 35.12080234578731 37.0 35.0 37.0 33.0 37.0 5 34.86823700720844 37.0 35.0 37.0 32.0 37.0 6 34.8400372636424 37.0 35.0 37.0 32.0 37.0 7 34.72716529654139 37.0 35.0 37.0 32.0 37.0 8 34.672923893246114 37.0 35.0 37.0 32.0 37.0 9 36.27516088393793 39.0 37.0 39.0 32.0 39.0 10-11 36.16459058877248 39.0 37.0 39.0 32.0 39.0 12-13 36.089963271816 39.0 37.0 39.0 32.0 39.0 14-15 37.342791944041664 40.0 38.0 41.0 32.0 41.0 16-17 37.308586808063204 40.0 38.0 41.0 32.0 41.0 18-19 37.266311568059294 40.0 38.0 41.0 31.0 41.0 20-21 37.20653962538691 40.0 38.0 41.0 31.0 41.0 22-23 37.11909966798915 40.0 38.0 41.0 31.0 41.0 24-25 37.03749793875155 40.0 37.5 41.0 31.0 41.0 26-27 36.91333965405125 40.0 37.0 41.0 30.0 41.0 28-29 36.79740345298742 40.0 37.0 41.0 30.0 41.0 30-31 36.65160998488729 40.0 37.0 41.0 30.0 41.0 32-33 36.61055750809914 40.0 37.0 41.0 30.0 41.0 34-35 36.74978548364281 40.0 37.0 41.0 30.0 41.0 36-37 36.75456544886732 40.0 37.0 41.0 30.0 41.0 38-39 36.659765202822854 40.0 37.0 41.0 30.0 41.0 40-41 36.58559915264374 40.0 37.0 41.0 30.0 41.0 42-43 36.47981681461924 40.0 37.0 41.0 30.0 41.0 44-45 36.36010123626956 40.0 36.5 41.0 29.5 41.0 46-47 36.21651500229235 40.0 36.0 41.0 29.0 41.0 48-49 36.08028426181198 40.0 36.0 41.0 28.5 41.0 50-51 35.928729953942586 40.0 35.5 41.0 28.0 41.0 52-53 35.75430904154811 39.5 35.0 41.0 28.0 41.0 54-55 35.54318392090347 39.0 35.0 41.0 27.5 41.0 56-57 35.314395466132524 39.0 35.0 41.0 27.0 41.0 58-59 35.07084194573329 39.0 35.0 40.5 26.5 41.0 60-61 34.794016212401694 38.0 35.0 40.0 26.0 41.0 62-63 34.48591025131114 37.5 34.0 40.0 26.0 41.0 64-65 34.14533180172695 37.0 34.0 40.0 26.0 41.0 66-67 33.787062445904716 36.5 34.0 39.0 25.5 41.0 68-69 33.42311230267626 36.0 34.0 39.0 25.0 41.0 70-71 33.02346186910147 35.5 33.5 38.5 24.0 40.0 72-73 32.65241370528423 35.0 33.0 37.5 23.0 39.5 74-75 32.25040578955739 35.0 33.0 37.0 22.0 39.0 76-77 29.54640306484668 33.0 29.0 34.5 17.5 36.5 78-79 31.117760222793322 34.5 31.5 36.0 19.5 37.0 80-81 31.29745793121784 35.0 32.0 35.5 20.0 37.0 82-83 31.12638216864915 35.0 32.0 35.0 20.0 37.0 84-85 30.932029283447434 35.0 32.0 35.0 19.5 36.0 86-87 30.72943500081118 35.0 32.0 35.0 18.0 36.0 88-89 30.46854101970993 35.0 32.0 35.0 13.0 36.0 90-91 30.280533582965283 35.0 32.0 35.0 8.5 35.0 92-93 30.13048681693423 34.0 32.0 35.0 6.0 35.0 94-95 30.030077444334303 34.0 31.5 35.0 2.0 35.0 96-97 29.835819929335475 34.0 31.0 35.0 2.0 35.0 98-99 29.641651923800808 34.0 31.0 35.0 2.0 35.0 100-101 28.52492132624255 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67655.0 3 23474.0 4 12809.0 5 9083.0 6 7930.0 7 7857.0 8 7940.0 9 8651.0 10 9601.0 11 10595.0 12 10905.0 13 11674.0 14 12535.0 15 13036.0 16 13920.0 17 14601.0 18 13970.0 19 13196.0 20 12938.0 21 12809.0 22 13696.0 23 15255.0 24 18538.0 25 22269.0 26 26486.0 27 32716.0 28 38990.0 29 47072.0 30 57739.0 31 72048.0 32 91466.0 33 121382.0 34 173616.0 35 260268.0 36 462779.0 37 918314.0 38 971998.0 39 113981.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.17938398306878 19.117483415821702 13.529177719894637 26.17395488121488 2 15.127435239434076 20.707050929074597 37.770823027080105 26.394690804411226 3 17.457371982735655 24.91759471412586 28.95436137901636 28.670671924122132 4 12.969096878197789 16.9484029732769 35.34342914703313 34.73907100149218 5 14.323038449598771 37.35282792875253 34.237822872575 14.0863107490737 6 33.864522091291335 35.44649985787429 16.972181455244787 13.716796595589601 7 29.14316266240573 31.542362618290355 21.17069321616829 18.143781503135628 8 26.79412530206114 34.96420820221041 19.661526354809656 18.5801401409188 9 26.884993392017087 15.21985895333067 18.871099178883867 39.024048475768375 10-11 25.684940634746837 25.151991360014158 27.9644378865085 21.198630118730506 12-13 26.289186822566368 22.525941177708557 27.695808572743058 23.48906342698202 14-15 23.553382526206562 24.02434467779867 24.62391695422452 27.79835584177025 16-17 23.96954227364162 27.01166526763729 25.34118157287842 23.677610885842668 18-19 23.975180993016025 26.613059629126823 26.42202328560133 22.98973609225582 20-21 24.633382688054542 25.679368891820452 26.136415099667587 23.550833320457418 22-23 24.466999112630877 25.45101714452555 25.91220400272471 24.16977974011886 24-25 24.277389893708207 25.733485837772978 25.827551258128327 24.161573010390487 26-27 24.09129095752567 25.86009688332056 25.905718652083863 24.14289350706991 28-29 24.17652752962721 26.00382592558107 25.77292768025588 24.046718864535833 30-31 24.50247205285365 25.822694287154597 25.57118595656562 24.10364770342613 32-33 24.276663522367397 25.82209482799848 25.56559087759786 24.33565077203626 34-35 24.447163760697148 25.847243075567995 25.703679695806024 24.00191346792883 36-37 24.4702996990648 25.82350907068141 25.659015055285124 24.04717617496867 38-39 24.44495474310917 25.83103277138617 25.59553763353493 24.128474851969727 40-41 24.496831763090206 25.680754675763556 25.654673499100213 24.16774006204603 42-43 24.362218034971754 25.647206608839983 25.58671571477764 24.40385964141062 44-45 24.28783286539548 25.674622431631278 25.69400421017521 24.343540492798038 46-47 24.449420625392367 25.680605819467644 25.523865443842205 24.346108111297788 48-49 24.17860754288345 25.71096763158564 25.6745878501121 24.435836975418805 50-51 24.2892258788621 25.71603561190072 25.655801532838762 24.33893697639842 52-53 24.494577843277273 25.59195634941725 25.624404174154243 24.289061633151235 54-55 24.065288258926923 25.4490419342021 25.853197324563514 24.632472482307463 56-57 24.13507806773059 25.55227402878404 25.70577062203352 24.60687728145185 58-59 24.242172336943973 25.532041026731374 25.747336647561696 24.478449988762957 60-61 24.25648979180795 25.5291719433669 25.746141065362615 24.468197199462534 62-63 24.215575643322964 25.535035538472812 25.806620081402087 24.442768736802137 64-65 24.049382702888682 25.362875506141524 25.756835400717776 24.83090639025202 66-67 24.034609786914174 25.629074993202792 25.655424172473175 24.680891047409865 68-69 24.046929809715127 25.5271261155345 25.64453326460373 24.781410810146642 70-71 24.023575320076638 25.32876716345735 25.733849682142644 24.91380783432337 72-73 24.020640480060248 25.491355296654604 25.547584042654968 24.94042018063018 74-75 23.91418841940432 25.543969994698628 25.619993159780414 24.921848426116636 76-77 23.898835359134317 25.21652942522542 25.79376321559113 25.09087200004913 78-79 23.831129061802347 25.232387713600325 25.804388243660014 25.132094980937314 80-81 23.938331958024445 25.42685113888505 25.55335467627903 25.081462226811475 82-83 23.81081238082143 25.464669849380673 25.637755237994742 25.08676253180316 84-85 23.8059141670035 25.392409169276377 25.654119674918185 25.147556988801938 86-87 23.699457791683724 25.467316284096952 25.619399592160818 25.21382633205851 88-89 23.64609025788846 25.253026850144032 25.690491630521883 25.410391261445625 90-91 23.578844873826664 25.20590225978782 25.745885495283684 25.469367371101832 92-93 23.600058426410445 25.160819227833148 25.80798767927739 25.43113466647902 94-95 23.476092977158014 25.090911028548817 25.83971311306164 25.593282881231527 96-97 23.38093383161275 25.049078355379518 25.8584182701505 25.711569542857234 98-99 23.236251549946125 24.96694314060344 25.840081124003817 25.956724185446618 100-101 23.20612395222422 24.9802399444827 25.84719156797739 25.966444535315684 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 32.5 2 48.0 3 65.0 4 59.5 5 62.0 6 110.5 7 267.0 8 374.0 9 370.5 10 320.0 11 267.5 12 276.0 13 302.0 14 321.5 15 350.5 16 411.0 17 467.5 18 534.0 19 606.0 20 646.0 21 740.5 22 916.5 23 1109.0 24 1343.0 25 1681.5 26 2175.5 27 2912.0 28 3978.0 29 5684.0 30 8540.5 31 12884.0 32 19029.5 33 25713.5 34 32926.5 35 41908.5 36 53251.5 37 65036.0 38 77093.0 39 89393.5 40 99565.0 41 109570.0 42 121050.5 43 132632.5 44 143348.5 45 153699.0 46 160569.0 47 166143.5 48 173328.5 49 176111.5 50 174024.5 51 172372.5 52 171375.0 53 169712.5 54 166567.0 55 158195.0 56 144974.5 57 129762.5 58 116796.5 59 102979.0 60 84374.5 61 68338.5 62 55455.5 63 41709.0 64 29512.5 65 21144.0 66 15659.0 67 11944.0 68 8939.0 69 6537.5 70 4834.0 71 3384.5 72 2277.0 73 1600.5 74 1138.5 75 786.5 76 489.5 77 273.5 78 145.0 79 77.5 80 56.0 81 36.5 82 20.5 83 15.5 84 13.5 85 9.5 86 6.0 87 4.0 88 3.0 89 1.5 90 2.0 91 2.0 92 1.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17038765856295218 2 1.0655888590553607E-4 3 0.01046941054021892 4 0.005967297610710021 5 0.025520853174375892 6 0.0019713393892524175 7 0.0 8 0.0 9 0.0 10-11 0.051547861056803077 12-13 3.1967665771660825E-4 14-15 0.005341264156014996 16-17 0.0 18-19 0.0015184641241538892 20-21 3.995958221457603E-4 22-23 0.0 24-25 5.993937332186405E-4 26-27 0.002730571451329362 28-29 0.00510150666272754 30-31 0.01696950258045662 32-33 0.011708157588870777 34-35 0.010615929008339032 36-37 0.004288995157697827 38-39 0.0 40-41 0.003409884348977154 42-43 0.008937626555326839 44-45 0.0071261254949327255 46-47 0.0035564028170972668 48-49 0.008910986833850455 50-51 0.002770531033543938 52-53 0.0019846592499906095 54-55 0.004328954739912403 56-57 0.007712199367413174 58-59 0.015490998038517308 60-61 0.007019566609027189 62-63 0.02179129216768213 64-65 0.04015938012564891 66-67 0.060019292486293195 68-69 0.050402353033318574 70-71 0.06878376085202353 72-73 0.0336726079461494 74-75 0.026360004400881987 76-77 0.23149917962977715 78-79 0.08716516867072852 80-81 0.06698557965236761 82-83 0.02719915562738808 84-85 0.05161446036049404 86-87 0.06818436711880489 88-89 0.29852471886435933 90-91 0.3026805154146752 92-93 0.055011024848733006 94-95 0.01060260914760084 96-97 0.016276869822070637 98-99 8.924306694588647E-4 100-101 2.1311777181107214E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3753793.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.442621839125884 #Duplication Level Percentage of deduplicated Percentage of total 1 77.14362012292094 43.541881778992085 2 12.32105070864762 13.908648116177833 3 4.139164197835583 7.008758386454479 4 1.9292322195796672 4.355636984383705 5 1.1006415685395698 3.1061547916750647 6 0.6926489578240479 2.345695391623643 7 0.48659250643050334 1.922518978114653 8 0.3436407710327177 1.5516788870324263 9 0.25290559788476724 1.2847189520167157 >10 1.486412985829445 14.95591768187422 >50 0.07701977463761822 2.946209432993804 >100 0.025697995932184938 2.4485517613132943 >500 0.0011359389601935635 0.4607758128730621 >1k 2.3665394516082805E-4 0.16285304447502055 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 2.663972147638402E-5 0.0 0.0 0.0 6 0.0 2.663972147638402E-5 0.0 0.0 0.0 7 0.0 2.663972147638402E-5 0.0 0.0 2.663972147638402E-5 8 0.0 2.663972147638402E-5 0.0 0.0 2.663972147638402E-5 9 0.0 2.663972147638402E-5 0.0 0.0 2.663972147638402E-5 10-11 0.0 2.663972147638402E-5 0.0 1.331986073819201E-5 2.663972147638402E-5 12-13 0.0 2.663972147638402E-5 0.0 5.327944295276804E-5 1.0655888590553608E-4 14-15 0.0 2.663972147638402E-5 0.0 5.327944295276804E-5 1.0655888590553608E-4 16-17 0.0 2.663972147638402E-5 0.0 5.327944295276804E-5 1.0655888590553608E-4 18-19 0.0 2.663972147638402E-5 0.0 5.327944295276804E-5 1.331986073819201E-4 20-21 0.0 2.663972147638402E-5 0.0 5.327944295276804E-5 1.4651846812011211E-4 22-23 0.0 2.663972147638402E-5 0.0 1.331986073819201E-4 2.3975749328745619E-4 24-25 0.0 2.663972147638402E-5 0.0 2.530773540256482E-4 2.9303693624022423E-4 26-27 0.0 2.663972147638402E-5 0.0 4.928348473131044E-4 2.9303693624022423E-4 28-29 0.0 2.663972147638402E-5 0.0 0.0019180599462996495 2.9303693624022423E-4 30-31 0.0 2.663972147638402E-5 0.0 0.008471431429490119 2.9303693624022423E-4 32-33 0.0 2.663972147638402E-5 0.0 0.026866159108933287 2.9303693624022423E-4 34-35 0.0 2.663972147638402E-5 0.0 0.05237369242257098 2.9303693624022423E-4 36-37 0.0 2.663972147638402E-5 0.0 0.09189371923278668 2.9303693624022423E-4 38-39 0.0 2.663972147638402E-5 0.0 0.15971845011166041 3.596362399311843E-4 40-41 0.0 2.663972147638402E-5 0.0 0.2410894793612754 3.729561006693763E-4 42-43 0.0 2.663972147638402E-5 0.0 0.32909379925851 3.729561006693763E-4 44-45 0.0 2.663972147638402E-5 0.0 0.4339610628502957 3.995958221457603E-4 46-47 0.0 2.663972147638402E-5 0.0 0.557316293146692 4.5287526509852835E-4 48-49 0.0 5.327944295276804E-5 0.0 0.686145986206485 4.7951498657491237E-4 50-51 0.0 5.327944295276804E-5 0.0 0.8263242006152177 5.061547080512964E-4 52-53 0.0 5.327944295276804E-5 0.0 0.9720301572303002 5.594341510040644E-4 54-55 0.0 5.327944295276804E-5 0.0 1.133733266591951 5.860738724804485E-4 56-57 0.0 5.327944295276804E-5 0.0 1.3216099023041494 5.860738724804485E-4 58-59 0.0 5.327944295276804E-5 0.0 1.5224467625146088 5.993937332186405E-4 60-61 0.0 5.327944295276804E-5 0.0 1.7369364799817144 6.393533154332165E-4 62-63 0.0 5.327944295276804E-5 0.0 1.9562080274538314 7.459122013387526E-4 64-65 0.0 5.327944295276804E-5 0.0 2.1970843890432956 7.725519228151366E-4 66-67 0.0 5.327944295276804E-5 0.0 2.4698884568222064 7.725519228151366E-4 68-69 0.0 5.327944295276804E-5 0.0 2.7722359757184263 7.725519228151366E-4 70-71 0.0 5.327944295276804E-5 0.0 3.089954613906521 8.524710872442887E-4 72-73 2.663972147638402E-5 5.327944295276804E-5 0.0 3.421619146287502 9.856696946262088E-4 74-75 2.663972147638402E-5 5.327944295276804E-5 0.0 3.768401720606331 0.0010123094161025928 76-77 2.663972147638402E-5 5.327944295276804E-5 0.0 4.156595741960199 0.0010389491375789768 78-79 2.663972147638402E-5 5.327944295276804E-5 0.0 4.582165292545433 0.0010389491375789768 80-81 2.663972147638402E-5 5.327944295276804E-5 0.0 5.037078496336905 0.0010789087197935528 82-83 2.663972147638402E-5 5.327944295276804E-5 0.0 5.504658887690398 0.001172147744960897 84-85 2.663972147638402E-5 5.327944295276804E-5 0.0 5.994097170515262 0.001172147744960897 86-87 2.663972147638402E-5 5.327944295276804E-5 0.0 6.5146772877460215 0.001185467605699089 88-89 2.663972147638402E-5 5.327944295276804E-5 0.0 7.085180243023523 0.001198787466437281 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2620 0.0 45.732277 1 GTATCAA 4420 0.0 40.232124 1 TCAACGC 5775 0.0 30.241455 4 CAACGCA 5935 0.0 29.532515 5 GTACATG 10795 0.0 28.761671 1 TATCAAC 6170 0.0 28.689997 2 ATCAACG 6170 0.0 28.305412 3 AACGCAG 6495 0.0 26.982258 6 TACATGG 11360 0.0 26.736742 2 ACATGGG 11740 0.0 25.38624 3 CATGGGG 10335 0.0 23.005629 4 TATACCG 355 0.0 21.408506 5 ACGCAGA 8110 0.0 21.374279 7 CGCAGAG 8350 0.0 20.532421 8 ATGGGGG 5790 0.0 19.525095 5 AGAGTAC 7760 0.0 17.595257 10-11 TATTAAG 1415 0.0 17.104902 2 GCAGAGT 9925 0.0 16.604218 9 GTATAGG 995 0.0 16.247234 1 GAGTACA 8160 0.0 16.14036 1 >>END_MODULE