##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921686_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3180307 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.315756623495783 33.0 31.0 34.0 28.0 34.0 2 31.45241795839207 34.0 31.0 34.0 28.0 34.0 3 31.529862368632966 34.0 31.0 34.0 28.0 34.0 4 34.995228133636154 37.0 35.0 37.0 32.0 37.0 5 34.734624361736145 37.0 35.0 37.0 32.0 37.0 6 34.70746000307518 37.0 35.0 37.0 32.0 37.0 7 34.589716338705664 37.0 35.0 37.0 32.0 37.0 8 34.535266878323384 37.0 35.0 37.0 32.0 37.0 9 36.12731569625196 39.0 37.0 39.0 32.0 39.0 10-11 36.013155333746084 39.0 37.0 39.0 31.0 39.0 12-13 35.93686395684442 39.0 37.0 39.0 31.0 39.0 14-15 37.1808749909993 40.0 38.0 41.0 31.0 41.0 16-17 37.14383988715555 40.0 38.0 41.0 31.0 41.0 18-19 37.10145718636597 40.0 38.0 41.0 31.0 41.0 20-21 37.04498968181373 40.0 38.0 41.0 31.0 41.0 22-23 36.95717127308779 40.0 37.5 41.0 30.5 41.0 24-25 36.87854631644052 40.0 37.0 41.0 30.0 41.0 26-27 36.75332805920938 40.0 37.0 41.0 30.0 41.0 28-29 36.63502312827032 40.0 37.0 41.0 30.0 41.0 30-31 36.49335268576273 40.0 37.0 41.0 30.0 41.0 32-33 36.45658453727894 40.0 37.0 41.0 30.0 41.0 34-35 36.593319607195156 40.0 37.0 41.0 30.0 41.0 36-37 36.60059060335999 40.0 37.0 41.0 30.0 41.0 38-39 36.50198534292444 40.0 37.0 41.0 30.0 41.0 40-41 36.43291889745235 40.0 37.0 41.0 30.0 41.0 42-43 36.32544672574063 40.0 37.0 41.0 29.0 41.0 44-45 36.20969264916877 40.0 36.5 41.0 29.0 41.0 46-47 36.068896964978535 40.0 36.0 41.0 28.0 41.0 48-49 35.93832985306136 40.0 36.0 41.0 28.0 41.0 50-51 35.78640835617442 40.0 35.5 41.0 28.0 41.0 52-53 35.622746011627186 39.5 35.0 41.0 27.0 41.0 54-55 35.41774221796827 39.0 35.0 41.0 27.0 41.0 56-57 35.19370535611814 39.0 35.0 41.0 26.0 41.0 58-59 34.956776499878785 39.0 35.0 40.5 26.0 41.0 60-61 34.683200238215996 38.0 34.5 40.0 26.0 41.0 62-63 34.382734119693474 37.5 34.0 40.0 26.0 41.0 64-65 34.04597449239964 37.0 34.0 40.0 25.0 41.0 66-67 33.692842074680215 36.5 34.0 39.5 24.0 41.0 68-69 33.327807032465735 36.0 34.0 39.0 23.0 41.0 70-71 32.9279956306105 35.5 33.0 39.0 22.0 40.0 72-73 32.561580532948554 35.0 33.0 37.5 22.0 40.0 74-75 32.15124892030864 35.0 33.0 37.0 20.5 39.0 76-77 29.448230469574163 33.0 29.0 34.5 14.5 36.5 78-79 31.004697974126397 34.5 31.5 36.0 18.0 37.0 80-81 31.177642127002205 35.0 32.0 36.0 18.5 37.0 82-83 30.996113582745313 35.0 32.0 35.0 18.0 37.0 84-85 30.79590555251427 35.0 32.0 35.0 17.5 36.0 86-87 30.583455307930965 35.0 32.0 35.0 13.5 36.0 88-89 30.31645954305669 35.0 32.0 35.0 7.0 36.0 90-91 30.12159989585911 34.5 31.5 35.0 4.5 35.0 92-93 29.96483326924099 34.0 31.0 35.0 2.0 35.0 94-95 29.859114072949563 34.0 31.0 35.0 2.0 35.0 96-97 29.661557044650092 34.0 31.0 35.0 2.0 35.0 98-99 29.461160196169743 34.0 31.0 35.0 2.0 35.0 100-101 28.356263719194406 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65433.0 3 20965.0 4 11172.0 5 7895.0 6 6853.0 7 6831.0 8 6964.0 9 7610.0 10 8323.0 11 8927.0 12 9563.0 13 10117.0 14 10693.0 15 11328.0 16 12132.0 17 12774.0 18 12220.0 19 11451.0 20 10965.0 21 11149.0 22 11624.0 23 13279.0 24 15696.0 25 19211.0 26 22878.0 27 27900.0 28 33024.0 29 40975.0 30 49320.0 31 61677.0 32 78275.0 33 103125.0 34 145925.0 35 218407.0 36 386035.0 37 767486.0 38 826284.0 39 95821.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.74305751755405 19.34587731490887 13.631319826804486 26.279745340732603 2 14.931465671206276 20.618877943743744 37.995958876887244 26.453697508162744 3 17.62083201255868 24.784367814356948 28.61442562655034 28.980374546534037 4 12.764557793138492 17.076316036071617 35.66122389169207 34.49790227909782 5 14.312758317342727 37.225941044909675 34.396162128857284 14.065138508890316 6 33.82297035418947 35.72511820622738 16.96066374718693 13.491247692396218 7 29.231894908258855 31.24742359778474 21.115760208055388 18.404921285901015 8 26.53149522986303 35.330897300166306 19.50126198508509 18.636345484885577 9 26.506694638817773 15.605196481093328 18.89302475925273 38.99508412083617 10-11 25.567337493076835 25.357829752112654 28.00888366932855 21.065949085481957 12-13 26.28596107312636 22.49972604755563 27.691820558240405 23.52249232107761 14-15 23.380112551241663 24.099653742911304 24.70879138934104 27.811442316505993 16-17 23.878842514260416 27.06994953631835 25.40776723756543 23.643440711855803 18-19 23.83055460131766 26.659460751212755 26.46334455621911 23.046640091250474 20-21 24.517132589912553 25.790597958021866 26.23855905349765 23.453710398567935 22-23 24.176034605469628 25.653282160068535 25.970232743290623 24.200450491171214 24-25 24.039304622616665 25.905095058229797 26.00373393914858 24.051866380004952 26-27 23.982981723322983 26.034076802040605 25.95175566028599 24.031185814350415 28-29 24.08800106032951 26.15671273953518 25.79809684688757 23.95718935324774 30-31 24.32527161081452 25.898085071622106 25.752980670515047 24.023662647048326 32-33 24.028040032660854 25.964341931415035 25.675579847315376 24.33203818860873 34-35 24.287856260550395 25.97024317164658 25.83838683059243 23.903513737210595 36-37 24.343133426032665 25.86056611996702 25.81454662543622 23.9817538285641 38-39 24.275175993257253 25.964793016019055 25.77449689204484 23.985534098678855 40-41 24.366915115284364 25.765285627341537 25.8049843697011 24.062814887673 42-43 24.215853001997477 25.74020067823558 25.790609229639095 24.25333709012785 44-45 24.173750838811685 25.81733433036885 25.78797985216789 24.220934978651574 46-47 24.316982418340547 25.80027476354393 25.61971945692536 24.263023361190168 48-49 24.132488120782565 25.830365985713648 25.758354052487263 24.27879184101652 50-51 24.16813655765497 25.856366429476914 25.773274811259395 24.202222201608723 52-53 24.364194298128456 25.82587804397566 25.700604341846905 24.10932331604898 54-55 24.046274819196242 25.611534838732908 25.953685874784544 24.388504467286307 56-57 24.069706871836832 25.74723837714357 25.837236693212816 24.34581805780678 58-59 24.178800883635894 25.71495870909532 25.8416484095859 24.264591997682885 60-61 24.194019311744917 25.76087969961814 25.817922191085742 24.2271787975512 62-63 24.12771466549547 25.763177430978658 25.852290998649064 24.25681690487681 64-65 23.99328600444601 25.59619582193442 25.83845517706496 24.57206299655461 66-67 23.961356867232546 25.822344849892186 25.719477511318317 24.496820771556955 68-69 24.00307799124578 25.756674158731418 25.70154149664808 24.538706353374725 70-71 23.952136223942837 25.52627215147853 25.778784611119796 24.742807013458837 72-73 23.988086400958224 25.693408202756395 25.643285908762643 24.675219487522742 74-75 23.922146417837897 25.731387025231207 25.617987105024742 24.728479451906153 76-77 23.8837023609711 25.466586592971975 25.8497206271655 24.799990418891422 78-79 23.8939097472839 25.508960835730992 25.781999022840512 24.815130394144596 80-81 23.988234648161956 25.671181511356227 25.608896760705264 24.731687079776556 82-83 23.941528770439106 25.661499306167997 25.649846325332355 24.747125598060542 84-85 23.982176187580396 25.62489205387538 25.62913911451617 24.76379264402805 86-87 23.828451260794125 25.746344089557045 25.613201662400332 24.8120029872485 88-89 23.800163144098686 25.558369587139463 25.632404145746058 25.00906312301579 90-91 23.748096247182417 25.575635874729674 25.672065350642175 25.004202527445734 92-93 23.750060167752412 25.554321963699262 25.761991157778564 24.93362671076976 94-95 23.63421411661006 25.484454911278853 25.75294619498197 25.12838477712912 96-97 23.594458814557402 25.521105721226796 25.747832034781787 25.13660342943401 98-99 23.543088874365367 25.3615442532367 25.71187487648499 25.383491995912937 100-101 23.480599314530075 25.384224758670566 25.75200452787473 25.38317139892463 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 14.0 2 22.5 3 42.0 4 42.5 5 35.0 6 62.5 7 173.5 8 256.0 9 242.5 10 208.0 11 187.0 12 215.0 13 235.5 14 254.5 15 276.5 16 300.0 17 340.5 18 387.5 19 462.5 20 525.5 21 610.0 22 746.5 23 969.5 24 1222.5 25 1533.0 26 1959.0 27 2647.0 28 3645.0 29 5159.5 30 7596.0 31 11152.5 32 16469.5 33 22579.0 34 29446.0 35 37729.0 36 47934.0 37 58753.0 38 69189.0 39 79657.5 40 88777.5 41 96916.5 42 105708.5 43 114480.5 44 122688.0 45 131496.5 46 137458.5 47 141852.5 48 146885.0 49 148731.0 50 147360.0 51 144987.0 52 142911.0 53 141030.0 54 137516.5 55 130541.0 56 120137.5 57 108129.5 58 96597.5 59 84163.0 60 69591.5 61 56153.5 62 45047.5 63 33601.0 64 23501.0 65 16782.0 66 12380.5 67 9536.5 68 6938.5 69 4869.0 70 3463.0 71 2303.5 72 1498.5 73 1020.0 74 730.0 75 472.0 76 302.0 77 172.5 78 83.0 79 53.0 80 43.5 81 31.0 82 19.5 83 13.5 84 7.5 85 5.0 86 4.5 87 3.0 88 4.5 89 5.5 90 4.0 91 2.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.5 97 0.5 98 0.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16973204159221109 2 9.433051589044706E-5 3 0.011162444380369568 4 0.005942822501098164 5 0.02628677042813791 6 0.001886610317808941 7 0.0 8 0.0 9 3.1443505296815685E-5 10-11 0.05236915807184653 12-13 3.301568056165647E-4 14-15 0.004889465073654839 16-17 0.0 18-19 0.0015564535121923764 20-21 2.6726979502293333E-4 22-23 1.5721752648407842E-5 24-25 6.131483532879059E-4 26-27 0.002484036918448439 28-29 0.005141013116029364 30-31 0.016586449044070275 32-33 0.011115279122424344 34-35 0.010407800253245992 36-37 0.0041819862044764865 38-39 1.5721752648407842E-5 40-41 0.0033172898088140545 42-43 0.009150060041373365 44-45 0.006697466628221741 46-47 0.003710333625024251 48-49 0.008757016225163167 50-51 0.002594089186987294 52-53 0.0022167671234255056 54-55 0.004166264451828078 56-57 0.007782267560961882 58-59 0.015423039348088093 60-61 0.006964736423244674 62-63 0.0206426612273595 64-65 0.04012191275873682 66-67 0.06104756553376765 68-69 0.05063976528052166 70-71 0.07062211289664803 72-73 0.034053316236451386 74-75 0.026774144760238556 76-77 0.2325718869278972 78-79 0.08582504770765842 80-81 0.0679651366990671 82-83 0.027135745071151934 84-85 0.05150446167618409 86-87 0.06702183154016264 88-89 0.29841458701942924 90-91 0.3017318768282433 92-93 0.05326529797280577 94-95 0.009920425921145348 96-97 0.01515576955306516 98-99 8.018093850687999E-4 100-101 2.201045370777098E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3180307.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.25927671848341 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44165053792294 49.459797038136 2 11.636173849201887 14.489195352436813 3 3.837477538021218 7.1675572782188235 4 1.6756302283707127 4.17294104263951 5 0.9133786348594303 2.8433146588231946 6 0.5442720566816199 2.0331590752247433 7 0.36967612824541146 1.6111037855254042 8 0.26970143121543916 1.3433132829930436 9 0.19570182661426597 1.096582875974122 >10 1.045644749485864 11.431213180663036 >50 0.052976517814138376 2.239850655185624 >100 0.01680503661716368 1.7137013704348658 >500 8.101910669642908E-4 0.32645373492586344 >1k 1.0127388293941833E-4 0.07181666881897537 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.1443505296815685E-5 2 0.0 0.0 0.0 0.0 3.1443505296815685E-5 3 0.0 0.0 0.0 0.0 3.1443505296815685E-5 4 0.0 0.0 0.0 3.1443505296815685E-5 3.1443505296815685E-5 5 0.0 0.0 0.0 6.288701059363137E-5 3.1443505296815685E-5 6 0.0 0.0 0.0 6.288701059363137E-5 3.1443505296815685E-5 7 0.0 0.0 0.0 6.288701059363137E-5 3.1443505296815685E-5 8 0.0 0.0 0.0 6.288701059363137E-5 3.1443505296815685E-5 9 0.0 0.0 0.0 6.288701059363137E-5 9.433051589044706E-5 10-11 3.1443505296815685E-5 0.0 0.0 6.288701059363137E-5 9.433051589044706E-5 12-13 3.1443505296815685E-5 0.0 0.0 6.288701059363137E-5 9.433051589044706E-5 14-15 3.1443505296815685E-5 0.0 0.0 7.860876324203921E-5 1.100522685388549E-4 16-17 3.1443505296815685E-5 0.0 0.0 9.433051589044706E-5 1.2577402118726274E-4 18-19 3.1443505296815685E-5 0.0 0.0 9.433051589044706E-5 1.2577402118726274E-4 20-21 3.1443505296815685E-5 3.1443505296815685E-5 0.0 9.433051589044706E-5 1.5721752648407842E-4 22-23 3.1443505296815685E-5 3.1443505296815685E-5 0.0 1.5721752648407842E-4 1.5721752648407842E-4 24-25 7.860876324203921E-5 3.1443505296815685E-5 0.0 2.515480423745255E-4 1.5721752648407842E-4 26-27 9.433051589044706E-5 3.1443505296815685E-5 0.0 2.8299154767134113E-4 1.5721752648407842E-4 28-29 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.0010690791800917333 1.5721752648407842E-4 30-31 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.005801326727262494 1.5721752648407842E-4 32-33 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.018630276888363294 1.5721752648407842E-4 34-35 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.036191474596634854 1.8866103178089412E-4 36-37 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.06610996988655497 1.8866103178089412E-4 38-39 9.433051589044706E-5 3.1443505296815685E-5 0.0 0.12069589508182701 1.8866103178089412E-4 40-41 1.100522685388549E-4 3.1443505296815685E-5 0.0 0.18009267658751182 1.8866103178089412E-4 42-43 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.243860105329454 2.0438278442930197E-4 44-45 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.32224876403441555 2.3582628972611762E-4 46-47 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.4124444589783314 2.6726979502293333E-4 48-49 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.5110512915891453 3.1443505296815683E-4 50-51 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.6205375770326576 3.1443505296815683E-4 52-53 1.2577402118726274E-4 3.1443505296815685E-5 0.0 0.7320048033098692 3.1443505296815683E-4 54-55 1.2577402118726274E-4 7.860876324203921E-5 0.0 0.859366721514621 3.301568056165647E-4 56-57 1.2577402118726274E-4 9.433051589044706E-5 0.0 1.0037081325796535 3.4587855826497254E-4 58-59 1.2577402118726274E-4 9.433051589044706E-5 0.0 1.1615388074170199 3.4587855826497254E-4 60-61 1.2577402118726274E-4 1.4149577383567056E-4 0.0 1.331192240245989 3.4587855826497254E-4 62-63 1.2577402118726274E-4 1.7293927913248627E-4 0.0 1.5084235578514904 4.402090741554196E-4 64-65 1.2577402118726274E-4 2.829915476713412E-4 0.0 1.699490017787591 4.402090741554196E-4 66-67 1.2577402118726274E-4 3.1443505296815683E-4 0.0 1.9168589699044778 4.402090741554196E-4 68-69 1.2577402118726274E-4 3.1443505296815683E-4 0.0 2.15886390842142 4.402090741554196E-4 70-71 1.2577402118726274E-4 3.4587855826497254E-4 0.0 2.4174395742297836 4.5593082680382745E-4 72-73 1.2577402118726274E-4 3.7732206356178824E-4 0.0 2.69109240082797 4.7165257945223525E-4 74-75 1.2577402118726274E-4 3.7732206356178824E-4 0.0 2.9729677040612748 4.873743321006431E-4 76-77 1.2577402118726274E-4 3.7732206356178824E-4 0.0 3.2887076624992493 5.03096084749051E-4 78-79 1.2577402118726274E-4 3.7732206356178824E-4 0.0 3.6429816366784715 5.03096084749051E-4 80-81 1.2577402118726274E-4 3.7732206356178824E-4 0.0 4.020162204466424 5.502613426942745E-4 82-83 1.2577402118726274E-4 3.7732206356178824E-4 0.0 4.416963519559589 6.288701059363137E-4 84-85 1.2577402118726274E-4 3.7732206356178824E-4 0.0 4.829282204516733 6.603136112331294E-4 86-87 1.2577402118726274E-4 3.7732206356178824E-4 0.0 5.2655765622627 6.603136112331294E-4 88-89 1.2577402118726274E-4 3.7732206356178824E-4 0.0 5.7379523423367615 6.603136112331294E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3820 0.0 42.56787 1 GGTATCA 2135 0.0 40.308804 1 TCAACGC 4545 0.0 35.089127 4 CAACGCA 4615 0.0 34.27747 5 ATCAACG 4745 0.0 33.81232 3 TATCAAC 5110 0.0 31.211376 2 AACGCAG 5110 0.0 31.04415 6 ACGCAGA 6075 0.0 25.408016 7 GTACATG 8135 0.0 24.664604 1 CGCAGAG 6475 0.0 23.765059 8 TACATGG 8430 0.0 22.635653 2 ACATGGG 8635 0.0 21.713472 3 CATGGGG 7460 0.0 19.405651 4 GCAGAGT 7735 0.0 18.911715 9 CTAATAC 840 0.0 18.08278 3 AGAGTAC 6295 0.0 17.54154 10-11 GTATTAT 985 0.0 16.89472 1 CCTAATA 835 0.0 16.48565 2 TAATACT 1800 0.0 16.085129 4 GAGTACA 6345 0.0 16.036196 1 >>END_MODULE