##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921685_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3060839 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.326901872329778 31.0 31.0 34.0 26.0 34.0 2 30.393883507103773 31.0 31.0 34.0 26.0 34.0 3 30.451526199189175 33.0 31.0 34.0 26.0 34.0 4 33.907461646953664 37.0 35.0 37.0 30.0 37.0 5 33.907361020948834 37.0 35.0 37.0 30.0 37.0 6 33.944350225542735 37.0 35.0 37.0 30.0 37.0 7 33.85695948071754 37.0 35.0 37.0 29.0 37.0 8 33.8280327714068 37.0 35.0 37.0 29.0 37.0 9 35.37916270669578 39.0 37.0 39.0 30.0 39.0 10-11 35.27367022571262 39.0 35.0 39.0 29.0 39.0 12-13 35.16653342433235 39.0 35.0 39.0 28.0 39.0 14-15 36.29352834304581 40.0 37.0 41.0 28.0 41.0 16-17 36.232283534024496 40.0 36.0 41.0 27.0 41.0 18-19 36.207332858735796 40.0 36.5 41.0 27.0 41.0 20-21 36.129247895756684 40.0 36.5 41.0 27.0 41.0 22-23 36.02763147620636 40.0 36.0 41.0 27.0 41.0 24-25 35.91890344444775 40.0 36.0 41.0 27.0 41.0 26-27 35.77386134978024 40.0 36.0 41.0 27.0 41.0 28-29 35.63504924630142 40.0 36.0 41.0 26.0 41.0 30-31 35.48770239140314 40.0 36.0 41.0 25.0 41.0 32-33 35.3109315779105 39.0 35.0 41.0 25.0 41.0 34-35 35.13514497168914 39.0 35.0 41.0 24.5 41.0 36-37 35.10373364949937 39.0 35.0 41.0 24.5 41.0 38-39 35.284054306678655 39.5 35.0 41.0 24.5 41.0 40-41 35.34687286721059 40.0 35.0 41.0 24.5 41.0 42-43 35.19152379461971 40.0 35.0 41.0 24.0 41.0 44-45 35.0746363987129 40.0 35.0 41.0 23.5 41.0 46-47 34.91636753844289 40.0 35.0 41.0 22.5 41.0 48-49 34.752033674427175 39.0 35.0 41.0 22.0 41.0 50-51 33.06273149290113 37.0 32.5 39.5 18.0 40.0 52-53 33.18223189785546 37.5 33.0 39.5 16.5 40.0 54-55 34.10680159916938 39.0 34.0 40.5 19.0 41.0 56-57 34.13589983007927 39.0 34.0 41.0 18.5 41.0 58-59 33.94772609732168 38.5 34.0 41.0 17.5 41.0 60-61 33.700333470659515 38.0 34.0 40.0 14.0 41.0 62-63 33.41278567739107 37.5 34.0 40.0 13.0 41.0 64-65 33.123366828506825 37.0 33.0 40.0 9.5 41.0 66-67 32.78502528228371 36.5 33.0 39.5 7.5 41.0 68-69 32.42331220296134 36.0 33.0 39.0 6.0 41.0 70-71 32.00907251247125 35.0 32.0 39.0 2.0 40.5 72-73 31.64077153355665 35.0 32.0 37.5 2.0 40.0 74-75 31.23372643905805 35.0 32.0 37.0 2.0 39.0 76-77 30.849926931798763 35.0 31.5 37.0 2.0 39.0 78-79 30.499260496876836 35.0 31.0 36.0 2.0 38.5 80-81 30.176490988255182 35.0 31.0 36.0 2.0 37.0 82-83 29.860121522236224 35.0 31.0 35.0 2.0 37.0 84-85 29.596402979705893 35.0 31.0 35.0 2.0 36.5 86-87 29.35761632676531 35.0 31.0 35.0 2.0 36.0 88-89 29.132785814608347 35.0 30.0 35.0 2.0 36.0 90-91 28.90632143670412 34.0 30.0 35.0 2.0 35.5 92-93 28.714858899798386 34.0 30.0 35.0 2.0 35.0 94-95 28.483013154236467 34.0 30.0 35.0 2.0 35.0 96-97 28.242946133396757 34.0 29.5 35.0 2.0 35.0 98-99 27.976962035572598 34.0 29.0 35.0 2.0 35.0 100-101 26.900599639510602 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 107272.0 3 18310.0 4 12559.0 5 9596.0 6 8702.0 7 8919.0 8 9302.0 9 10135.0 10 10970.0 11 11741.0 12 11860.0 13 12095.0 14 12950.0 15 13745.0 16 13709.0 17 14236.0 18 13468.0 19 12952.0 20 13018.0 21 13896.0 22 15287.0 23 17260.0 24 20189.0 25 23651.0 26 28188.0 27 33229.0 28 38581.0 29 46014.0 30 54642.0 31 66453.0 32 82472.0 33 107293.0 34 148011.0 35 214239.0 36 353078.0 37 644177.0 38 707983.0 39 120644.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.690267066155606 18.061794392205652 13.193464263369814 25.05447427826893 2 15.908008997698264 19.786500836995188 39.409754917346724 24.895735247959824 3 18.77172517151279 23.921326435332553 29.57127687120913 27.73567152194553 4 13.365763678057501 15.955886535859845 36.51702805609519 34.16132172998746 5 14.320354228795868 37.092186710273985 34.3908782946593 14.19658076627085 6 33.41869992282373 35.195845420035646 17.332412794402007 14.053041862738628 7 28.805607064378314 31.749381213393562 21.286161235776078 18.158850486452042 8 26.308397716831116 34.739836643893355 20.22188616309208 18.72987947618344 9 26.918770389901475 15.4347204592496 19.38395338237528 38.26255576847364 10-11 25.440322830979355 25.11495952359558 28.246289322561406 21.198428322863656 12-13 26.064473794715052 22.746850049033913 27.80312712511605 23.385549031134982 14-15 23.408238598665577 24.27657162803741 25.01679959262622 27.298390180670793 16-17 23.538323755138297 27.188174073203214 25.890914295919735 23.382587875738746 18-19 23.517217606100903 26.74953357751762 27.056865967659192 22.67638284872228 20-21 24.19965381426812 25.968292341008304 26.776587335431884 23.05546650929169 22-23 24.04826772960868 25.7607975202668 26.422205691829614 23.76872905829491 24-25 23.810357990733866 25.938673300772873 26.48043431084431 23.770534397648955 26-27 23.61998955609482 26.10278619600687 26.52833611859257 23.748888129305744 28-29 23.764276072855882 26.31293471914125 26.334826903076113 23.587962304926755 30-31 24.094284112281454 26.022643060567525 26.23931040251571 23.643762424635316 32-33 23.827764375146113 26.109885750983114 26.087618522348016 23.974731351522756 34-35 24.088321487574817 26.149837967928153 26.188849167965273 23.572991376531757 36-37 24.122006720432303 26.05804336426736 26.187437006156856 23.63251290914348 38-39 23.957014710420403 26.122027110274487 26.180314020730076 23.740644158575027 40-41 24.109601080243635 25.97075396523317 26.204321039888057 23.71532391463514 42-43 23.9393461095249 25.920056402728054 26.097788524481185 24.04280896326586 44-45 23.878427880696492 26.004851492603276 26.222808562458876 23.893912064241356 46-47 24.03956488189497 25.92281881941132 26.00515562638667 24.03246067230704 48-49 23.80096755520748 26.01180435687962 26.121338599795173 24.06588948811772 50-51 23.86220501891994 26.048118211938366 26.19047813914934 23.89919862999236 52-53 24.028515316718714 25.918421167652717 26.156507168362847 23.89655634726572 54-55 23.634568952111245 25.76374008626687 26.419319195606445 24.182371766015436 56-57 23.71741952825443 25.878676831087947 26.270147504591357 24.13375613606626 58-59 23.825892262942507 25.80393831257227 26.33814270084112 24.0320267236441 60-61 23.903397720554516 25.729347733726005 26.39249010582871 23.97476443989077 62-63 23.867824966413423 25.73101042604004 26.42371160870339 23.97745299884315 64-65 23.666484634665704 25.56634542602036 26.426774026259753 24.340395913054184 66-67 23.669858518417026 25.76010481596558 26.27018888383077 24.29984778178662 68-69 23.670545446212422 25.699678032380092 26.32505143788742 24.304725083520072 70-71 23.5611475761058 25.509978449436378 26.356403145953472 24.572470828504358 72-73 23.551443510737016 25.636562773004663 26.295170531693792 24.516823184564533 74-75 23.507600843974405 25.659571890872602 26.342346530391097 24.490480734761892 76-77 23.519263794201777 25.377324458114742 26.457674124442924 24.645737623240553 78-79 23.449261952447888 25.372412544401868 26.46955494503156 24.708770558118687 80-81 23.61984038037574 25.49684862168643 26.295126845126067 24.588184152811763 82-83 23.512973476724106 25.5174949882869 26.41140057488164 24.558130960107352 84-85 23.494598024667425 25.48068674305877 26.43369433817453 24.59102089409928 86-87 23.426626159009857 25.56647648067434 26.378976716066553 24.627920644249247 88-89 23.39336321236974 25.2528289133711 26.46907991299581 24.884727961263355 90-91 23.33297199259983 25.241227689529495 26.531672606955492 24.894127710915186 92-93 23.415314513717803 25.108863772343803 26.659171656153895 24.8166500577845 94-95 23.314333154302634 25.05364371143744 26.645663308749363 24.986359825510565 96-97 23.292453463598683 24.9445427912179 26.660694897740278 25.10230884744314 98-99 23.152047025896632 24.822640104288027 26.680823254487972 25.344489615327365 100-101 23.35974123336651 24.68979806128087 26.756429945373018 25.1940307599796 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 62.5 2 85.5 3 125.5 4 117.5 5 131.5 6 204.0 7 420.0 8 651.0 9 722.0 10 628.5 11 571.0 12 678.5 13 736.5 14 804.0 15 940.0 16 1053.0 17 1150.0 18 1265.5 19 1362.0 20 1453.5 21 1560.5 22 1668.0 23 1873.0 24 2137.0 25 2410.5 26 2821.5 27 3532.5 28 4606.5 29 6299.0 30 8952.0 31 13062.0 32 19361.5 33 26030.5 34 32849.0 35 41153.5 36 51372.5 37 61524.0 38 71322.5 39 80551.5 40 88278.5 41 96476.5 42 104196.0 43 112268.0 44 120747.0 45 128662.5 46 133206.5 47 136104.5 48 140185.5 49 141762.0 50 139510.0 51 135688.5 52 132528.0 53 129443.0 54 125543.5 55 118529.0 56 108161.5 57 96161.0 58 85578.0 59 75092.0 60 61404.0 61 49624.5 62 40515.5 63 30587.0 64 21846.0 65 15914.0 66 11998.5 67 9230.0 68 6934.0 69 5127.5 70 3729.5 71 2667.0 72 1882.0 73 1334.5 74 946.0 75 654.5 76 489.5 77 332.0 78 215.5 79 156.5 80 128.5 81 104.0 82 88.0 83 71.0 84 58.5 85 53.0 86 48.0 87 48.5 88 38.0 89 28.5 90 29.0 91 26.0 92 22.5 93 22.0 94 17.5 95 17.5 96 14.5 97 7.0 98 6.5 99 7.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.052175236920334586 2 0.07445670941856139 3 0.07105894821648574 4 0.07125497290122088 5 0.06615833109810741 6 0.010225954387016109 7 0.013525703246724183 8 0.017348184599059277 9 0.006338131473102636 10-11 0.013525703246724183 12-13 0.02326159592190246 14-15 0.04054443895938336 16-17 0.027786499061205117 18-19 0.010095271263859354 20-21 0.02064793345876735 22-23 0.03773475181151312 24-25 0.03577450496416179 26-27 0.022248801717437604 28-29 0.012610921384626893 30-31 0.012643592165416084 32-33 0.009392849476891793 34-35 0.005864405151659398 36-37 7.840987389405322E-4 38-39 0.0038388167427296895 40-41 0.0015681974778810645 42-43 0.23150515267219215 44-45 0.19958579984115468 46-47 0.20621796834136 48-49 0.21376491870366263 50-51 0.2044374107883492 52-53 0.21172299490433832 54-55 0.20791684894239781 56-57 0.21103690850776535 58-59 0.22100149664846794 60-61 0.22524869815106252 62-63 0.2097300772761978 64-65 0.21010579125527346 66-67 0.20721442715543026 68-69 0.20203610840034383 70-71 0.19375406547028445 72-73 0.20548287577360327 74-75 0.20399635524769513 76-77 0.19736418674748982 78-79 0.2166726181939004 80-81 0.22923453340734354 82-83 0.2284667700587976 84-85 0.22121385672359767 86-87 0.2425642119693326 88-89 0.23500092621663538 90-91 0.2416330947168407 92-93 0.2369285022831975 94-95 0.24042427582764073 96-97 0.2477752015052082 98-99 0.2408653313682948 100-101 0.2478405430667866 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3060839.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.91768844683475 #Duplication Level Percentage of deduplicated Percentage of total 1 80.54722109690319 50.6784496223327 2 11.008075962164398 13.852053875731007 3 3.4542697048292137 6.52003995299353 4 1.5932227932739216 4.009675813344176 5 0.8741619018758926 2.7500123097159968 6 0.5433084238737921 2.051022608629925 7 0.3684716100097757 1.6228367372069064 8 0.2724416652304713 1.3713119850326119 9 0.21235350125368663 1.2024712289226587 >10 1.062318287285457 11.631070959272618 >50 0.04671669126007203 1.9680511570018049 >100 0.01629251169989069 1.7376741712963635 >500 7.812615959024026E-4 0.32042619214082385 >1k 3.645887443605859E-4 0.2849033863789631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 3.267078078918885E-5 0.0 6 0.0 0.0 0.0 3.267078078918885E-5 3.267078078918885E-5 7 0.0 0.0 0.0 3.267078078918885E-5 3.267078078918885E-5 8 0.0 0.0 0.0 3.267078078918885E-5 3.267078078918885E-5 9 0.0 0.0 0.0 6.53415615783777E-5 6.53415615783777E-5 10-11 0.0 0.0 0.0 6.53415615783777E-5 6.53415615783777E-5 12-13 0.0 0.0 0.0 6.53415615783777E-5 1.306831231567554E-4 14-15 0.0 0.0 0.0 6.53415615783777E-5 1.7968929434053867E-4 16-17 3.267078078918885E-5 0.0 0.0 6.53415615783777E-5 2.2869546552432192E-4 18-19 3.267078078918885E-5 0.0 0.0 6.53415615783777E-5 2.777016367081052E-4 20-21 3.267078078918885E-5 0.0 0.0 6.53415615783777E-5 3.4304319828648284E-4 22-23 3.267078078918885E-5 0.0 0.0 1.470185135513498E-4 4.24720150259455E-4 24-25 3.267078078918885E-5 0.0 0.0 3.7571397907567173E-4 4.900617118378327E-4 26-27 3.267078078918885E-5 0.0 0.0 7.187571773621547E-4 4.900617118378327E-4 28-29 4.900617118378327E-5 0.0 0.0 0.002744345586291863 4.900617118378327E-4 30-31 6.53415615783777E-5 0.0 0.0 0.012137195063183656 5.063971022324272E-4 32-33 6.53415615783777E-5 1.6335390394594424E-5 0.0 0.036035871210475294 5.554032734162103E-4 34-35 6.53415615783777E-5 3.267078078918885E-5 0.0 0.06976845237531278 6.207448349945881E-4 36-37 6.53415615783777E-5 3.267078078918885E-5 0.0 0.12481871800509597 6.207448349945881E-4 38-39 6.53415615783777E-5 3.267078078918885E-5 0.0 0.21489206064088964 7.187571773621547E-4 40-41 9.801234236756654E-5 3.267078078918885E-5 0.0 0.31615514569698044 8.4944030051891E-4 42-43 9.801234236756654E-5 3.267078078918885E-5 0.0 0.4219431338923739 8.984464717026933E-4 44-45 9.801234236756654E-5 3.267078078918885E-5 0.0 0.5561873721551509 9.801234236756654E-4 46-47 9.801234236756654E-5 3.267078078918885E-5 0.0 0.711291903951825 0.0010618003756486375 48-49 9.801234236756654E-5 3.267078078918885E-5 0.0 0.8690264336020288 0.0011108065468324207 50-51 9.801234236756654E-5 3.267078078918885E-5 0.0 1.0363498374138596 0.0011108065468324207 52-53 9.801234236756654E-5 3.267078078918885E-5 0.0 1.2070383316469766 0.0011924834988053929 54-55 9.801234236756654E-5 3.267078078918885E-5 0.0 1.409009098485742 0.0013231666219621482 56-57 9.801234236756654E-5 3.267078078918885E-5 0.0 1.6464603332615666 0.001388508183540526 58-59 9.801234236756654E-5 3.267078078918885E-5 0.0 1.892651001898499 0.0014375143547243092 60-61 9.801234236756654E-5 3.267078078918885E-5 0.0 2.146012906918658 0.0014375143547243092 62-63 9.801234236756654E-5 3.267078078918885E-5 0.0 2.410009151085699 0.001502855916302687 64-65 9.801234236756654E-5 3.267078078918885E-5 0.0 2.7022819560257823 0.0015191913066972813 66-67 9.801234236756654E-5 3.267078078918885E-5 0.0 3.0402121771187574 0.00155186208748647 68-69 9.801234236756654E-5 3.267078078918885E-5 0.0 3.3976631897332723 0.0015681974778810647 70-71 9.801234236756654E-5 3.267078078918885E-5 0.0 3.7758274773681335 0.0016662098202486313 72-73 9.801234236756654E-5 3.267078078918885E-5 0.0 4.171519638896394 0.0017968929434053864 74-75 9.801234236756654E-5 3.267078078918885E-5 0.0 4.593054388028904 0.0018949052857729532 76-77 9.801234236756654E-5 3.267078078918885E-5 0.0 5.0635299667836176 0.0018949052857729532 78-79 9.801234236756654E-5 3.267078078918885E-5 0.0 5.580071346451088 0.0018949052857729532 80-81 9.801234236756654E-5 3.267078078918885E-5 0.0 6.123092393948196 0.0019439114569567363 82-83 9.801234236756654E-5 3.267078078918885E-5 0.0 6.679802498595974 0.002041923799324303 84-85 9.801234236756654E-5 3.267078078918885E-5 0.0 7.255526997663059 0.0020909299705080863 86-87 9.801234236756654E-5 3.267078078918885E-5 0.0 7.886171079236771 0.0020909299705080863 88-89 9.801234236756654E-5 3.267078078918885E-5 0.0 8.564416488420331 0.0020909299705080863 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2410 0.0 49.43259 1 GTATCAA 4265 0.0 42.065826 1 TCAACGC 5170 0.0 33.60281 4 CAACGCA 5275 0.0 32.84181 5 TATCAAC 5405 0.0 32.406338 2 ATCAACG 5365 0.0 32.38146 3 GTACATG 8425 0.0 30.5905 1 AACGCAG 5755 0.0 30.086382 6 TACATGG 8735 0.0 28.746967 2 ACATGGG 8795 0.0 27.848316 3 ACGCAGA 6750 0.0 25.092073 7 CATGGGG 7735 0.0 24.791689 4 CGCAGAG 6745 0.0 24.549974 8 ATGGGGG 4450 0.0 19.838537 5 AATACCG 290 2.4665496E-9 19.63993 5 GCAGAGT 8020 0.0 19.583467 9 GTATATA 830 0.0 19.442741 1 TAAGGCG 670 0.0 19.126945 5 AGAGTAC 6645 0.0 18.601835 10-11 ATACCGT 305 9.430005E-8 17.108631 6 >>END_MODULE