##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921685_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3060839 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303778473810613 33.0 31.0 34.0 28.0 34.0 2 31.438074658614845 34.0 31.0 34.0 28.0 34.0 3 31.507046924062323 34.0 31.0 34.0 28.0 34.0 4 34.98974823569616 37.0 35.0 37.0 32.0 37.0 5 34.721535827268276 37.0 35.0 37.0 32.0 37.0 6 34.69187565892881 37.0 35.0 37.0 32.0 37.0 7 34.574084752579274 37.0 35.0 37.0 32.0 37.0 8 34.51682496204472 37.0 35.0 37.0 31.0 37.0 9 36.09883629945907 39.0 37.0 39.0 32.0 39.0 10-11 35.983798559806644 39.0 37.0 39.0 31.0 39.0 12-13 35.90766779958044 39.0 37.0 39.0 30.5 39.0 14-15 37.13277437983507 40.0 38.0 41.0 31.0 41.0 16-17 37.10028818895734 40.0 38.0 41.0 31.0 41.0 18-19 37.06376372622016 40.0 38.0 41.0 31.0 41.0 20-21 37.00471227006713 40.0 37.5 41.0 31.0 41.0 22-23 36.91732070847242 40.0 37.0 41.0 30.0 41.0 24-25 36.83142644876127 40.0 37.0 41.0 30.0 41.0 26-27 36.703182689452134 40.0 37.0 41.0 30.0 41.0 28-29 36.58120240888201 40.0 37.0 41.0 30.0 41.0 30-31 36.42242600803244 40.0 37.0 41.0 30.0 41.0 32-33 36.36631230848796 40.0 36.5 41.0 29.5 41.0 34-35 36.49348005563181 40.0 37.0 41.0 30.0 41.0 36-37 36.489507778749555 40.0 37.0 41.0 30.0 41.0 38-39 36.388538240658846 40.0 37.0 41.0 29.5 41.0 40-41 36.30660024914738 40.0 37.0 41.0 29.0 41.0 42-43 36.18544898963977 40.0 36.0 41.0 29.0 41.0 44-45 36.056663712139056 40.0 36.0 41.0 28.0 41.0 46-47 35.901022236060115 40.0 36.0 41.0 27.5 41.0 48-49 35.7596853346419 40.0 35.5 41.0 27.0 41.0 50-51 35.604358478181965 40.0 35.0 41.0 27.0 41.0 52-53 35.43816532003153 39.0 35.0 41.0 26.5 41.0 54-55 35.22991816949536 39.0 35.0 41.0 26.0 41.0 56-57 35.00790159168777 39.0 35.0 41.0 26.0 41.0 58-59 34.77042961096615 38.5 35.0 40.5 26.0 41.0 60-61 34.49701405398977 38.0 34.0 40.0 25.0 41.0 62-63 34.19450206299645 37.5 34.0 40.0 24.0 41.0 64-65 33.86226782918017 37.0 34.0 40.0 23.0 41.0 66-67 33.51481358542543 36.5 34.0 39.5 22.5 41.0 68-69 33.14886849651354 36.0 33.5 39.0 22.0 41.0 70-71 32.75112951056883 35.5 33.0 39.0 21.5 40.0 72-73 32.384164766588505 35.0 33.0 37.5 20.0 40.0 74-75 31.975767591826944 35.0 33.0 37.0 19.5 39.0 76-77 29.264666648588836 33.0 29.0 34.5 12.0 36.5 78-79 30.83019933423483 34.5 31.5 36.0 14.0 37.0 80-81 31.009265106724005 35.0 32.0 36.0 16.5 37.0 82-83 30.82919307418652 35.0 32.0 35.0 13.0 37.0 84-85 30.62927239884228 35.0 32.0 35.0 10.5 36.0 86-87 30.421695162666182 35.0 32.0 35.0 7.0 36.0 88-89 30.153156046430407 35.0 31.5 35.0 2.0 36.0 90-91 29.95635575735934 34.0 31.0 35.0 2.0 35.0 92-93 29.79829893045665 34.0 31.0 35.0 2.0 35.0 94-95 29.69342066015233 34.0 31.0 35.0 2.0 35.0 96-97 29.49332388929963 34.0 31.0 35.0 2.0 35.0 98-99 29.295883579632903 34.0 31.0 35.0 2.0 35.0 100-101 28.184872677066647 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61514.0 3 20966.0 4 11333.0 5 7728.0 6 6663.0 7 6835.0 8 7040.0 9 7489.0 10 8548.0 11 9384.0 12 9653.0 13 10613.0 14 11438.0 15 11933.0 16 12742.0 17 13773.0 18 13145.0 19 11707.0 20 11561.0 21 11259.0 22 11863.0 23 13511.0 24 15793.0 25 18982.0 26 22927.0 27 27792.0 28 33007.0 29 39830.0 30 48753.0 31 60389.0 32 76544.0 33 100728.0 34 143914.0 35 212944.0 36 370897.0 37 724556.0 38 781479.0 39 91605.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.489130968346196 19.757924906062218 13.765640207006735 25.987303918584857 2 14.979863298472406 21.240226095610044 37.89545250649415 25.88445809942339 3 17.35128142879875 25.167969328178234 29.435270830630916 28.045478412392104 4 13.00480912960276 17.264216566682034 35.605659867537376 34.12531443617783 5 14.088410518441979 37.5109922483204 34.44051539306908 13.960081840168542 6 33.31032177735029 35.85235271651255 17.089363793097252 13.747961713039908 7 28.53953721170477 31.99006285206862 21.423283427610347 18.047116508616266 8 26.278513832318524 35.28245033469582 20.018465525302048 18.42057030768361 9 26.74960255982185 15.37931769012277 19.368290644588182 38.502789105467194 10-11 25.319540276473475 25.45846017264638 28.2525315290962 20.969468021783946 12-13 25.87709561453418 22.97163854272694 27.88349813359235 23.267767709146533 14-15 23.224910383579353 24.51057092312877 25.05562891426049 27.20888977903138 16-17 23.424316572076574 27.514012908554307 25.86655584736013 23.195114672008994 18-19 23.43111250799017 26.988019275406376 27.037516276427194 22.543351940176258 20-21 24.07096701369122 26.138069389990726 26.82925434779874 22.961709248519316 22-23 23.903564333760176 25.94919660086607 26.50522070994598 23.64201835542777 24-25 23.658994537083046 26.147658518847404 26.510747613628897 23.68259933044064 26-27 23.525435424181843 26.344253420157344 26.527786807878194 23.60252434778262 28-29 23.658928299253247 26.531218690356994 26.393976982404276 23.41587602798548 30-31 24.02278074707296 26.182566533025238 26.232659603859553 23.56199311604225 32-33 23.744283956849692 26.255912091789973 26.125964518463697 23.873839432896634 34-35 24.006519138697353 26.28566910208601 26.258304533827015 23.449507225389617 36-37 24.012625791521536 26.199840625683052 26.2530960862464 23.534437496549014 38-39 23.90568402977092 26.247231559712876 26.19961389671263 23.64747051380357 40-41 24.014352843736802 26.14047196449852 26.208674926712444 23.63650026505223 42-43 23.902016416311625 26.062360942228256 26.07260418744518 23.963018454014936 44-45 23.789002743890286 26.10864864546964 26.17280235560269 23.92954625503738 46-47 23.93285486094253 26.04002727469057 26.027105448959116 24.00001241540778 48-49 23.697631406591572 26.146178300192823 26.142110376652145 24.014079916563457 50-51 23.833707152997064 26.08931812352875 26.12453830685013 23.952436416624057 52-53 23.99169947160338 26.047784069951046 26.05332189394234 23.907194564503236 54-55 23.583497524190822 25.930447984973455 26.285299536889482 24.20075495394624 56-57 23.61436551909475 25.99009832246534 26.140101957382434 24.255434201057476 58-59 23.68175381018013 25.975230316492798 26.22415576760074 24.11886010572633 60-61 23.771590238362343 25.925112726582434 26.23673325625728 24.066563778797946 62-63 23.743737908184798 25.908316816056054 26.247136810111954 24.100808465647194 64-65 23.501666807480674 25.76026897708403 26.22502056238553 24.513043653049763 66-67 23.54018911563514 26.002680636487714 26.033475265407528 24.423654982469618 68-69 23.55135564843162 25.925284887852477 26.044201990406872 24.479157473309026 70-71 23.44783382882449 25.692836239123213 26.08459764357951 24.77473228847279 72-73 23.387702183719806 25.85392605152202 26.046113134314602 24.71225863044357 74-75 23.359501698125076 25.873200669609485 26.013053953563613 24.754243678701826 76-77 23.26223061825978 25.557715144778438 26.254989035868665 24.925065201093123 78-79 23.14242603440978 25.61207391400809 26.26640675593509 24.97909329564704 80-81 23.30216955354183 25.741617752925507 26.054928327774483 24.90128436575818 82-83 23.174159713057087 25.69474684732571 26.18831192280084 24.94278151681636 84-85 23.122211843886955 25.659003859596652 26.154140342877312 25.064643953639077 86-87 23.01207428797009 25.791228344049777 26.121932899553663 25.07476446842647 88-89 22.90462438399736 25.55855357115649 26.165090592261997 25.37173145258416 90-91 22.8442085826144 25.454694403187737 26.239226265424843 25.46187074877302 92-93 22.836858312681084 25.363523454979347 26.349421521804544 25.450196710535028 94-95 22.63293997984358 25.322265001199945 26.38429165086756 25.660503368088918 96-97 22.55308435513988 25.20492087850938 26.4221029454267 25.819891820924042 98-99 22.34063302789161 25.118146714614713 26.402805398434992 26.138414859058688 100-101 22.27368244973916 25.11761507982143 26.420969853948208 26.187732616491203 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 65.5 2 81.5 3 105.0 4 100.0 5 111.5 6 174.5 7 385.0 8 562.5 9 583.5 10 513.5 11 438.5 12 445.5 13 461.5 14 488.0 15 546.5 16 621.5 17 653.5 18 702.5 19 811.5 20 922.0 21 1035.5 22 1216.5 23 1492.5 24 1792.5 25 2197.0 26 2816.5 27 3662.5 28 4937.5 29 6975.5 30 10236.0 31 14803.0 32 21098.5 33 27779.5 34 34528.0 35 42571.0 36 52080.0 37 62039.0 38 71777.5 39 80744.0 40 88640.0 41 96461.5 42 104617.5 43 112790.5 44 120591.5 45 128860.5 46 133781.5 47 137236.0 48 141506.0 49 142397.5 50 140194.0 51 136799.0 52 133768.5 53 130188.5 54 125846.5 55 118206.5 56 107185.0 57 95072.5 58 84216.0 59 73861.5 60 60618.5 61 48801.0 62 39464.0 63 29801.5 64 21058.0 65 15066.0 66 11285.0 67 8652.0 68 6396.0 69 4604.0 70 3347.5 71 2344.0 72 1566.0 73 1051.5 74 758.5 75 505.5 76 299.0 77 163.5 78 90.0 79 52.5 80 32.5 81 22.0 82 15.5 83 11.5 84 5.5 85 3.5 86 2.5 87 3.0 88 2.5 89 1.5 90 1.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1663922865593388 2 3.2670780789188845E-4 3 0.010127942044648543 4 0.006599497719416147 5 0.02378432841452948 6 0.001894905285772953 7 3.267078078918885E-5 8 0.0 9 3.267078078918885E-5 10-11 0.04972492836114543 12-13 4.083847598648606E-4 14-15 0.005080306412718866 16-17 1.6335390394594424E-5 18-19 0.00155186208748647 20-21 2.777016367081052E-4 22-23 1.6335390394594424E-5 24-25 6.534156157837769E-4 26-27 0.0028750287094486187 28-29 0.005897075932448587 30-31 0.017495203112610627 32-33 0.01221887201515663 34-35 0.01019328360622692 36-37 0.0039204936947026614 38-39 0.0 40-41 0.003969499865886445 42-43 0.009327507915313416 44-45 0.007220242554410735 46-47 0.004116518379437795 48-49 0.010111606654253948 50-51 0.003071053394183752 52-53 0.0022869546552432194 54-55 0.004002170646675634 56-57 0.008053347464535052 58-59 0.01584532868275659 60-61 0.0073672610679620856 62-63 0.021546379930470042 64-65 0.04075679903451308 66-67 0.06089833539104801 68-69 0.051129771935080545 70-71 0.06826559645901009 72-73 0.034631027636540176 74-75 0.027655815938048358 76-77 0.22926720418813273 78-79 0.08525440246938829 80-81 0.0670731129602047 82-83 0.028015194526729438 84-85 0.051668839818102164 86-87 0.06751416850085874 88-89 0.2942167163970401 90-91 0.2988232964883158 92-93 0.05385778213097782 94-95 0.009000800107421526 96-97 0.014718186745529575 98-99 8.494403005189099E-4 100-101 2.2869546552432195E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3060839.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.112776591377695 #Duplication Level Percentage of deduplicated Percentage of total 1 79.97321740089934 49.673585857157406 2 11.318724207816153 14.060747760390063 3 3.5264062347175336 6.571046478823547 4 1.6521072664880707 4.10467878193461 5 0.8997121003587252 2.794180834307034 6 0.573575448555481 2.137581821665551 7 0.37751691032635104 1.6414036457397467 8 0.28845614649096124 1.4333449746722235 9 0.21928087647656125 1.2258129682215122 >10 1.1049292326415936 12.002384672945116 >50 0.04883236869588781 2.0579875090049713 >100 0.01597483340023174 1.6788970110584722 >500 0.0010030203976826538 0.3954762659988763 >1k 2.6395273544048664E-4 0.2228714180808098 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 3.267078078918885E-5 3 0.0 0.0 0.0 0.0 3.267078078918885E-5 4 0.0 0.0 0.0 3.267078078918885E-5 6.53415615783777E-5 5 0.0 0.0 0.0 6.53415615783777E-5 6.53415615783777E-5 6 0.0 0.0 0.0 6.53415615783777E-5 1.306831231567554E-4 7 0.0 0.0 0.0 9.801234236756654E-5 1.306831231567554E-4 8 0.0 0.0 0.0 9.801234236756654E-5 1.306831231567554E-4 9 0.0 0.0 0.0 9.801234236756654E-5 1.960246847351331E-4 10-11 0.0 0.0 0.0 9.801234236756654E-5 1.960246847351331E-4 12-13 0.0 0.0 0.0 9.801234236756654E-5 2.2869546552432192E-4 14-15 0.0 0.0 0.0 9.801234236756654E-5 3.1037241749729406E-4 16-17 0.0 0.0 0.0 9.801234236756654E-5 4.24720150259455E-4 18-19 0.0 0.0 0.0 9.801234236756654E-5 4.737263214432383E-4 20-21 0.0 0.0 0.0 9.801234236756654E-5 4.900617118378327E-4 22-23 0.0 0.0 0.0 1.7968929434053867E-4 5.063971022324272E-4 24-25 0.0 0.0 0.0 4.0838475986486057E-4 5.554032734162103E-4 26-27 0.0 0.0 0.0 7.514279581513435E-4 5.554032734162103E-4 28-29 0.0 0.0 0.0 0.0027606809766864576 5.554032734162103E-4 30-31 0.0 0.0 0.0 0.012578250603837706 5.717386638108047E-4 32-33 0.0 0.0 0.0 0.03711400697651853 6.207448349945881E-4 34-35 0.0 0.0 0.0 0.0714673329763506 6.207448349945881E-4 36-37 0.0 0.0 0.0 0.12723635578349596 6.207448349945881E-4 38-39 0.0 0.0 0.0 0.21897590823953825 6.207448349945881E-4 40-41 0.0 0.0 0.0 0.3212191167193047 6.207448349945881E-4 42-43 0.0 0.0 0.0 0.42746449584574686 6.370802253891825E-4 44-45 0.0 0.0 0.0 0.562950223778513 6.534156157837769E-4 46-47 0.0 0.0 0.0 0.7202763686688518 6.534156157837769E-4 48-49 0.0 0.0 3.267078078918885E-5 0.8788276678387854 7.514279581513435E-4 50-51 0.0 0.0 3.267078078918885E-5 1.0458080284523297 7.840987389405324E-4 52-53 0.0 0.0 3.267078078918885E-5 1.216088137925582 8.167695197297211E-4 54-55 0.0 0.0 3.267078078918885E-5 1.4184509541338177 8.821110813080988E-4 56-57 0.0 0.0 3.267078078918885E-5 1.656833306162134 9.311172524918822E-4 58-59 0.0 0.0 3.267078078918885E-5 1.9030893163606448 9.474526428864766E-4 60-61 0.0 0.0 3.267078078918885E-5 2.1569739538734316 9.474526428864766E-4 62-63 0.0 3.267078078918885E-5 3.267078078918885E-5 2.4205781486710016 9.801234236756654E-4 64-65 0.0 4.900617118378327E-5 3.267078078918885E-5 2.71365138774042 9.801234236756654E-4 66-67 0.0 9.801234236756654E-5 3.267078078918885E-5 3.051793968908525 9.801234236756654E-4 68-69 0.0 9.801234236756654E-5 3.267078078918885E-5 3.4111398868088125 9.801234236756654E-4 70-71 0.0 9.801234236756654E-5 3.267078078918885E-5 3.7899902608402467 9.801234236756654E-4 72-73 0.0 9.801234236756654E-5 3.267078078918885E-5 4.188524780297167 0.0011924834988053929 74-75 0.0 9.801234236756654E-5 3.267078078918885E-5 4.613114247433465 0.0012088188891999873 76-77 0.0 9.801234236756654E-5 3.267078078918885E-5 5.086775227315125 0.0012088188891999873 78-79 0.0 9.801234236756654E-5 3.267078078918885E-5 5.607318777629271 0.0012088188891999873 80-81 0.0 9.801234236756654E-5 3.267078078918885E-5 6.155518143881465 0.0012088188891999873 82-83 0.0 9.801234236756654E-5 3.267078078918885E-5 6.716328431518287 0.0013068312315675538 84-85 0.0 9.801234236756654E-5 3.267078078918885E-5 7.297982677298609 0.0013231666219621482 86-87 0.0 9.801234236756654E-5 3.267078078918885E-5 7.93516091503016 0.0013721727931459316 88-89 0.0 9.801234236756654E-5 3.267078078918885E-5 8.618404953674467 0.0014211789643297148 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2600 0.0 49.918583 1 GTATCAA 4480 0.0 39.37031 1 TCAACGC 5700 0.0 30.476261 4 CAACGCA 5870 0.0 29.615911 5 ATCAACG 5980 0.0 29.128174 3 TATCAAC 6020 0.0 29.013474 2 AACGCAG 6415 0.0 27.242567 6 GTACATG 8295 0.0 26.24956 1 TACATGG 8425 0.0 25.069086 2 ACATGGG 8785 0.0 23.12333 3 ACGCAGA 7465 0.0 22.964663 7 CGCAGAG 7755 0.0 21.983423 8 CATGGGG 7445 0.0 21.229267 4 TAAGGCG 690 0.0 19.96324 5 ATGGGGG 4275 0.0 18.77728 5 AGAGTAC 7495 0.0 18.343145 10-11 GCAGAGT 9105 0.0 17.681398 9 TCTATAC 905 0.0 16.782234 3 CTACACG 610 0.0 16.339733 4 TATACCG 235 5.140019E-5 16.169785 5 >>END_MODULE