##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921684_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3584544 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.214478326950374 31.0 31.0 34.0 26.0 34.0 2 30.27215009775302 31.0 31.0 34.0 26.0 34.0 3 30.33503815269111 31.0 31.0 34.0 26.0 34.0 4 33.784475235901695 37.0 35.0 37.0 28.0 37.0 5 33.7698265107082 37.0 35.0 37.0 28.0 37.0 6 33.81170603569101 37.0 35.0 37.0 29.0 37.0 7 33.722502499620596 37.0 35.0 37.0 29.0 37.0 8 33.68715100163368 37.0 35.0 37.0 28.0 37.0 9 35.223000749886175 39.0 35.0 39.0 29.0 39.0 10-11 35.11685349656749 39.0 35.0 39.0 28.0 39.0 12-13 35.00428590080077 39.0 35.0 39.0 27.0 39.0 14-15 36.12001986863601 40.0 36.0 41.0 27.0 41.0 16-17 36.05664988349983 40.0 36.0 41.0 27.0 41.0 18-19 36.01362265325798 40.0 36.0 41.0 27.0 41.0 20-21 35.93164221167323 40.0 36.0 41.0 27.0 41.0 22-23 35.82932975575136 40.0 36.0 41.0 27.0 41.0 24-25 35.712096155047895 40.0 36.0 41.0 26.5 41.0 26-27 35.55907543609452 40.0 36.0 41.0 25.5 41.0 28-29 35.41741501847933 40.0 36.0 41.0 25.0 41.0 30-31 35.26671969991162 39.0 35.0 41.0 25.0 41.0 32-33 35.092593507012324 39.0 35.0 41.0 24.0 41.0 34-35 34.91966676932965 39.0 35.0 41.0 24.0 41.0 36-37 34.89059110447521 39.0 35.0 41.0 23.5 41.0 38-39 35.07529479342421 39.5 35.0 41.0 24.0 41.0 40-41 35.136952147888266 40.0 35.0 41.0 24.0 41.0 42-43 34.976184976387515 40.0 35.0 41.0 23.0 41.0 44-45 34.85322107916656 40.0 35.0 41.0 22.0 41.0 46-47 34.69303180544024 39.0 35.0 41.0 21.5 41.0 48-49 34.523420831213116 39.0 35.0 41.0 20.0 41.0 50-51 32.82164732808413 37.0 32.0 39.5 16.0 40.0 52-53 32.93680479302249 37.5 32.5 39.5 14.5 40.0 54-55 33.83702097114724 38.0 34.0 40.0 16.0 41.0 56-57 33.84786265700742 38.0 34.0 41.0 14.5 41.0 58-59 33.64630884709464 38.0 34.0 40.0 13.0 41.0 60-61 33.38075470687485 37.5 33.0 40.0 12.0 41.0 62-63 33.07533775565316 37.0 33.0 40.0 8.0 41.0 64-65 32.77703007690797 36.5 33.0 40.0 7.5 41.0 66-67 32.4250682932055 36.0 33.0 39.0 4.0 41.0 68-69 32.05687613264058 35.5 32.0 39.0 2.0 41.0 70-71 31.645723138005838 35.0 32.0 38.5 2.0 40.0 72-73 31.2847610463144 35.0 32.0 37.0 2.0 39.5 74-75 30.892922363346635 35.0 31.5 37.0 2.0 39.0 76-77 30.52969136381085 35.0 31.0 36.0 2.0 39.0 78-79 30.201760809743163 35.0 31.0 36.0 2.0 37.5 80-81 29.903273331280072 35.0 31.0 35.0 2.0 37.0 82-83 29.612585310711765 35.0 31.0 35.0 2.0 36.5 84-85 29.377419554621174 35.0 30.0 35.0 2.0 36.0 86-87 29.162957268762774 34.5 30.0 35.0 2.0 36.0 88-89 28.961296471740894 34.0 30.0 35.0 2.0 35.5 90-91 28.75372976311631 34.0 30.0 35.0 2.0 35.0 92-93 28.577891636983672 34.0 30.0 35.0 2.0 35.0 94-95 28.36556741945419 34.0 29.5 35.0 2.0 35.0 96-97 28.14254393306373 34.0 29.0 35.0 2.0 35.0 98-99 27.88570331400591 34.0 29.0 35.0 2.0 35.0 100-101 26.826350436764063 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 133405.0 3 22713.0 4 15318.0 5 11976.0 6 10773.0 7 11316.0 8 11673.0 9 12644.0 10 13737.0 11 14304.0 12 14419.0 13 14412.0 14 14946.0 15 15456.0 16 15480.0 17 16360.0 18 15569.0 19 15343.0 20 15242.0 21 16238.0 22 17847.0 23 20388.0 24 23743.0 25 28470.0 26 33132.0 27 40112.0 28 46627.0 29 55567.0 30 66141.0 31 80774.0 32 100742.0 33 130410.0 34 180713.0 35 262507.0 36 437404.0 37 775460.0 38 766914.0 39 106263.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.502024305059315 17.345296421680718 13.020061052951265 25.132618220308707 2 16.155684543502723 19.253265879896027 38.839499348080395 25.751550228520852 3 19.448681855085024 23.306825630986427 28.55860599488756 28.685886519040988 4 13.802888467626884 15.534601027966152 35.57312881962572 35.089381684781245 5 15.151638663497147 36.366953421728155 33.571391680985805 14.910016233788895 6 34.3236996542009 34.09391093371338 17.07623706740934 14.506152344676385 7 29.942947320019552 30.928562500139506 20.434502139475498 18.693988040365443 8 27.24164130558221 33.814029006923455 19.693306431563578 19.251023255930754 9 27.189047189398718 15.736309405237586 18.785895910021477 38.28874749534222 10-11 26.143327102480395 24.69178343528746 27.29075920192442 21.874130260307727 12-13 26.814297762861507 22.089302768152812 27.01709054101095 24.07930892797473 14-15 23.969836497843193 23.526976292968715 24.270528194800438 28.232659014387657 16-17 24.404871118021738 26.512066801161595 24.96070565047514 24.12235643034153 18-19 24.384515392451217 26.033173489667078 26.113904445908304 23.468406671973398 20-21 24.937436632660077 25.21894213811084 25.976036664219055 23.867584565010024 22-23 24.853114762425122 24.896902994275017 25.74890365458704 24.501078588712826 24-25 24.712249043365077 25.115442947469536 25.62280167227445 24.54950633689094 26-27 24.36896190660222 25.327746087730546 25.731651764942242 24.571640240724992 28-29 24.57217495969021 25.539902854733814 25.469648451766503 24.41827373380947 30-31 24.81940441051942 25.29614719178776 25.332292815544598 24.55215558214822 32-33 24.56839494688995 25.382117139669745 25.22330941405892 24.826178499381385 34-35 24.83604733643618 25.409527688829957 25.329331669615833 24.425093305118022 36-37 24.94234233379709 25.210342029153704 25.378244612457067 24.469071024592143 38-39 24.757451992924327 25.293972327536025 25.36366333662864 24.58491234291101 40-41 24.92351431980158 25.104334795324696 25.434325537394464 24.537825347479263 42-43 24.809167723369857 25.176297801400203 25.257967709835107 24.756566765394833 44-45 24.645952894731177 25.225117181701457 25.397168182264195 24.73176174130317 46-47 24.811562477721726 25.184062243581412 25.271442010783034 24.732933267913833 48-49 24.64522283653137 25.219545739283994 25.272626187687266 24.862605236497373 50-51 24.67077610035077 25.30421672179242 25.466127365233117 24.55887981262369 52-53 24.96489439941779 25.0566966807611 25.355602783956254 24.62280613586486 54-55 24.469212485966978 24.968942484430702 25.630715341217496 24.931129688384818 56-57 24.46076353668888 25.143595088690095 25.581411928904775 24.814229445716247 58-59 24.643234666762478 25.00316309210463 25.468896074564253 24.88470616656864 60-61 24.61910492225788 25.027931070689412 25.69197121705088 24.660992790001828 62-63 24.60745184824216 25.084793196582243 25.61153637597729 24.696218579198305 64-65 24.4212749717973 24.93032150380859 25.569918236628702 25.07848528776541 66-67 24.43153217467713 24.988554948896013 25.55719401315143 25.02271886327543 68-69 24.536093137809907 24.982241027210854 25.608173181085608 24.873492653893624 70-71 24.416426721410662 24.781121147790206 25.625957667045856 25.176494463753272 72-73 24.39534464369834 24.956590172367278 25.553117106589262 25.094948077345116 74-75 24.36463289084958 25.073138070166976 25.558367527801135 25.003861511182308 76-77 24.34127139875556 24.751746760170125 25.657554496625007 25.24942734444931 78-79 24.31032638821415 24.86331230947639 25.679740695667615 25.146620606641847 80-81 24.42288859943525 24.969729475186 25.577279181764645 25.03010274361411 82-83 24.38206806143638 24.887643654215378 25.696298951769542 25.0339893325787 84-85 24.31222988411257 24.944618946898082 25.65538382128078 25.087767347708574 86-87 24.231528005633738 25.05385107179155 25.60967355986488 25.104947362709833 88-89 24.12525752395004 24.773559299093005 25.719186404692994 25.381996772263953 90-91 24.12529180245893 24.80543939080792 25.804384748831044 25.26488405790211 92-93 24.251032599219226 24.639490419853534 25.849692929413266 25.25978405151397 94-95 24.082276569372787 24.55872926557515 25.885268210720376 25.473725954331687 96-97 24.100392149843135 24.42243832121494 25.94785394383148 25.529315585110446 98-99 23.86676675092165 24.41556146092435 25.93333974707844 25.784332041075565 100-101 24.10321749522644 24.31515057947022 26.023117277657654 25.55851464764569 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 44.5 2 62.0 3 92.5 4 93.5 5 99.5 6 143.0 7 353.0 8 583.5 9 606.0 10 539.0 11 499.0 12 537.0 13 592.0 14 694.5 15 809.0 16 918.5 17 1064.5 18 1145.0 19 1256.0 20 1378.0 21 1459.5 22 1572.5 23 1687.0 24 1786.0 25 1985.0 26 2327.0 27 2734.0 28 3282.0 29 4150.0 30 5566.5 31 8118.0 32 12592.5 33 17605.5 34 23178.5 35 30991.0 36 41379.0 37 52968.0 38 65008.5 39 76586.5 40 87042.0 41 97083.5 42 107885.5 43 119256.0 44 129851.0 45 140303.0 46 149065.0 47 156475.0 48 163336.0 49 167937.0 50 168173.0 51 167625.0 52 167269.0 53 166239.0 54 165359.0 55 158354.0 56 146475.0 57 132225.0 58 120099.0 59 106287.5 60 87246.0 61 72540.0 62 60451.5 63 46747.5 64 34192.0 65 25234.5 66 18848.0 67 14347.5 68 10833.0 69 8013.5 70 6178.5 71 4648.0 72 3256.5 73 2382.0 74 1800.5 75 1330.5 76 946.5 77 654.0 78 441.5 79 300.0 80 224.5 81 186.0 82 137.5 83 101.0 84 95.5 85 83.0 86 70.0 87 68.0 88 60.0 89 55.0 90 42.5 91 32.5 92 24.0 93 16.0 94 20.0 95 19.5 96 16.5 97 14.5 98 12.0 99 10.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.058026906630243624 2 0.07850370925841613 3 0.07510020800414223 4 0.07571395413196212 5 0.06999495612273136 6 0.010656864583054357 7 0.013614005017095619 8 0.017882330360570273 9 0.006193256380727925 10-11 0.013879031754108751 12-13 0.023336301632787878 14-15 0.04106519546140318 16-17 0.028274168206611494 18-19 0.011633278877313264 20-21 0.02169034610818001 22-23 0.03876364748207861 24-25 0.03572281439424373 26-27 0.021941424069560872 28-29 0.011912254389958667 30-31 0.012023844595016828 32-33 0.009359628449253239 34-35 0.005621356579804851 36-37 6.974387816135051E-4 38-39 0.004198581465313301 40-41 0.00138092878759474 42-43 0.23890068025389002 44-45 0.20663716221644926 46-47 0.2128304185971772 48-49 0.22032091111170624 50-51 0.21121236062383386 52-53 0.21859126293330478 54-55 0.2151598641277663 56-57 0.2181588508887044 58-59 0.22704422096646043 60-61 0.23237265325798764 62-63 0.2163036637296125 64-65 0.21645710026156742 66-67 0.2139881669746556 68-69 0.20864578590749616 70-71 0.19989990358606283 72-73 0.2117145165465956 74-75 0.21136579715578885 76-77 0.20504700179437052 78-79 0.22461713400644545 80-81 0.23595748859548105 82-83 0.23495317674995758 84-85 0.22835540587589384 86-87 0.2494599034075185 88-89 0.24167648660471178 90-91 0.24892984993349224 92-93 0.24375485417392004 94-95 0.2468375335886517 96-97 0.25456515528892937 98-99 0.2480092307417624 100-101 0.25450936018640025 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3584544.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.37631849398355 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8550300474157 40.70340954734984 2 13.035186085894315 14.176108604698642 3 4.719168228115532 7.698329837960944 4 2.26569173341987 4.927999012224982 5 1.3247926322270134 3.6018673054229446 6 0.8224285881936675 2.6832383310105654 7 0.5753819880343778 2.190100796594113 8 0.4144928474827238 1.8030876070558988 9 0.29874370691203606 1.4620124659609934 >10 1.5903374876214995 15.245325080733332 >50 0.07669451396919522 2.7966090556562575 >100 0.020303057027301515 1.7615803186099823 >500 0.0011317600385670479 0.43663299834116737 >1k 6.173236481249949E-4 0.5136990383803297 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7897551264540205E-5 2 0.0 0.0 0.0 0.0 2.7897551264540205E-5 3 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 2.7897551264540205E-5 4 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 5.579510252908041E-5 5 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 8.369265379362061E-5 6 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 8.369265379362061E-5 7 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 8.369265379362061E-5 8 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 8.369265379362061E-5 9 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 1.1159020505816082E-4 10-11 0.0 2.7897551264540205E-5 0.0 2.7897551264540205E-5 1.3948775632270102E-4 12-13 0.0 5.579510252908041E-5 0.0 2.7897551264540205E-5 2.9292428827767215E-4 14-15 0.0 1.2553898069043092E-4 0.0 2.7897551264540205E-5 4.184632689681031E-4 16-17 0.0 1.6738530758724122E-4 0.0 2.7897551264540205E-5 4.463608202326433E-4 18-19 0.0 1.6738530758724122E-4 0.0 2.7897551264540205E-5 4.7425837149718346E-4 20-21 0.0 1.6738530758724122E-4 0.0 2.7897551264540205E-5 5.579510252908041E-4 22-23 0.0 1.6738530758724122E-4 0.0 5.579510252908041E-5 6.276949034521546E-4 24-25 0.0 1.8133408321951132E-4 0.0 1.8133408321951132E-4 7.113875572457752E-4 26-27 0.0 1.9528285885178143E-4 0.0 2.9292428827767215E-4 7.532338841425855E-4 28-29 0.0 1.9528285885178143E-4 0.0 0.0013251336850656596 7.532338841425855E-4 30-31 0.0 1.9528285885178143E-4 0.0 0.006681463527857379 7.671826597748556E-4 32-33 0.0 1.9528285885178143E-4 0.0 0.0219274752939286 8.369265379362061E-4 34-35 2.7897551264540205E-5 2.2318041011632164E-4 0.0 0.043422538543256825 8.648240892007463E-4 36-37 2.7897551264540205E-5 2.5107796138086185E-4 0.0 0.0788942749761197 8.648240892007463E-4 38-39 2.7897551264540205E-5 2.7897551264540203E-4 0.0 0.13706066936268602 9.345679673620968E-4 40-41 2.7897551264540205E-5 2.7897551264540203E-4 0.0 0.20496330914057687 9.485167429943669E-4 42-43 2.7897551264540205E-5 3.3477061517448245E-4 0.0 0.27813858610746583 9.764142942589072E-4 44-45 2.7897551264540205E-5 3.3477061517448245E-4 0.0 0.3696286054795254 0.0010182606211557174 46-47 2.7897551264540205E-5 3.9056571770356287E-4 0.0 0.47664361213030165 0.0011019532749493382 48-49 2.7897551264540205E-5 4.463608202326433E-4 0.0 0.5934367104992992 0.0011716971531106884 50-51 2.7897551264540205E-5 4.603095958649134E-4 0.0 0.7157256264674112 0.001227492255639769 52-53 2.7897551264540205E-5 4.7425837149718346E-4 0.0 0.8422689190033655 0.0013530312363302 54-55 2.7897551264540205E-5 5.440022496585339E-4 0.0 0.9930970299151021 0.0014785702170206309 56-57 2.7897551264540205E-5 5.579510252908041E-4 0.0 1.1652388699929475 0.0015622628708142515 58-59 2.7897551264540205E-5 5.579510252908041E-4 0.0 1.345345460956819 0.001645955524607872 60-61 2.7897551264540205E-5 5.579510252908041E-4 0.0 1.5433762286081576 0.0016738530758724122 62-63 2.7897551264540205E-5 5.579510252908041E-4 0.0 1.7506410857280592 0.0017575457296660328 64-65 2.7897551264540205E-5 5.579510252908041E-4 0.0 1.97264979869127 0.0018133408321951133 66-67 2.7897551264540205E-5 5.858485765553443E-4 0.0 2.2308276868689574 0.0018970334859887339 68-69 2.7897551264540205E-5 5.858485765553443E-4 0.0 2.5164149191640552 0.001924931037253274 70-71 2.7897551264540205E-5 5.858485765553443E-4 0.0 2.8152255907585455 0.0019807261397823545 72-73 2.7897551264540205E-5 5.858485765553443E-4 0.0 3.1329229045591296 0.0022178553255309463 74-75 2.7897551264540205E-5 5.858485765553443E-4 0.0 3.4712923038467376 0.0022736504280600266 76-77 2.7897551264540205E-5 6.137461278198845E-4 0.0 3.8475047314246944 0.002315496754956837 78-79 5.579510252908041E-5 6.137461278198845E-4 0.0 4.268492728782238 0.002329445530589107 80-81 5.579510252908041E-5 6.137461278198845E-4 0.0 4.702285702170206 0.0023712918574859175 82-83 5.579510252908041E-5 6.137461278198845E-4 0.0 5.165357155610309 0.0025665747163376986 84-85 5.579510252908041E-5 6.137461278198845E-4 0.0 5.655028924181151 0.002594472267602239 86-87 5.579510252908041E-5 6.137461278198845E-4 0.0 6.178624115089674 0.002664216145763589 88-89 5.579510252908041E-5 6.137461278198845E-4 0.0 6.744498044939608 0.0027758063508217506 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4745 0.0 46.01376 1 GGTATCA 2540 0.0 42.04506 1 TCAACGC 5775 0.0 37.068314 4 CAACGCA 5885 0.0 36.45203 5 ATCAACG 6145 0.0 34.913128 3 TATCAAC 6365 0.0 34.005154 2 AACGCAG 6470 0.0 33.357105 6 ACGCAGA 7465 0.0 28.660816 7 GTACATG 10715 0.0 28.43865 1 CGCAGAG 7740 0.0 27.092773 8 TACATGG 11355 0.0 26.376703 2 ACATGGG 11735 0.0 24.834616 3 CATGGGG 9950 0.0 23.279573 4 GCAGAGT 9255 0.0 21.171806 9 AGAGTAC 7600 0.0 19.25865 10-11 GAGTACA 8170 0.0 18.939201 1 GTATATA 725 0.0 18.331 1 AGTACAT 8065 0.0 18.009237 2 ATGGGGG 5770 0.0 17.931244 5 GTATTAA 1675 0.0 17.0021 1 >>END_MODULE