##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921684_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3584544 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.386409540516173 33.0 31.0 34.0 29.0 34.0 2 31.52252336698894 34.0 31.0 34.0 28.0 34.0 3 31.59487315541391 34.0 31.0 34.0 28.0 34.0 4 35.07761266147103 37.0 35.0 37.0 32.0 37.0 5 34.81984486729693 37.0 35.0 37.0 32.0 37.0 6 34.791955685297765 37.0 35.0 37.0 32.0 37.0 7 34.6816515573529 37.0 35.0 37.0 32.0 37.0 8 34.62412959640054 37.0 35.0 37.0 32.0 37.0 9 36.21311246284046 39.0 37.0 39.0 32.0 39.0 10-11 36.10948282403564 39.0 37.0 39.0 32.0 39.0 12-13 36.02796241307123 39.0 37.0 39.0 31.0 39.0 14-15 37.268454230161495 40.0 38.0 41.0 31.0 41.0 16-17 37.235656892480606 40.0 38.0 41.0 31.0 41.0 18-19 37.1873588383906 40.0 38.0 41.0 31.0 41.0 20-21 37.126126921583335 40.0 38.0 41.0 31.0 41.0 22-23 37.037399736200754 40.0 37.5 41.0 31.0 41.0 24-25 36.9493645495773 40.0 37.0 41.0 30.5 41.0 26-27 36.82269767088924 40.0 37.0 41.0 30.0 41.0 28-29 36.69856863243972 40.0 37.0 41.0 30.0 41.0 30-31 36.546329742360534 40.0 37.0 41.0 30.0 41.0 32-33 36.50248636925645 40.0 36.5 41.0 30.0 41.0 34-35 36.638272260014105 40.0 37.0 41.0 30.0 41.0 36-37 36.637199599167985 40.0 37.0 41.0 30.0 41.0 38-39 36.53321482453556 40.0 37.0 41.0 30.0 41.0 40-41 36.44907511248293 40.0 37.0 41.0 30.0 41.0 42-43 36.32961333435996 40.0 36.5 41.0 29.5 41.0 44-45 36.19975651017256 40.0 36.0 41.0 29.0 41.0 46-47 36.042555761625465 40.0 36.0 41.0 28.0 41.0 48-49 35.89546215641376 40.0 35.5 41.0 28.0 41.0 50-51 35.73192922168064 39.5 35.0 41.0 28.0 41.0 52-53 35.55217246600962 39.0 35.0 41.0 27.0 41.0 54-55 35.3271863868877 39.0 35.0 41.0 27.0 41.0 56-57 35.08800924190078 39.0 35.0 41.0 26.0 41.0 58-59 34.836111232000505 38.0 35.0 40.0 26.0 41.0 60-61 34.542505964496456 38.0 34.0 40.0 26.0 41.0 62-63 34.22701729982949 37.0 34.0 40.0 26.0 41.0 64-65 33.87784638715552 37.0 34.0 39.5 25.0 41.0 66-67 33.514883064624115 36.0 34.0 39.0 24.0 41.0 68-69 33.14688995308748 36.0 33.5 39.0 23.0 40.5 70-71 32.74494552166189 35.0 33.0 38.5 22.5 40.0 72-73 32.38251769262701 35.0 33.0 37.0 22.0 39.5 74-75 31.98193870684807 35.0 33.0 37.0 20.5 39.0 76-77 29.29634843371988 33.0 29.0 34.5 15.0 36.0 78-79 30.869747449047914 34.5 31.5 35.0 18.0 37.0 80-81 31.063768501656 35.0 32.0 35.0 19.0 37.0 82-83 30.908134619075675 35.0 32.0 35.0 18.0 36.5 84-85 30.727313013872894 35.0 32.0 35.0 17.5 36.0 86-87 30.536899672594338 35.0 32.0 35.0 15.0 36.0 88-89 30.282784923270576 35.0 32.0 35.0 7.0 35.5 90-91 30.09988188176795 34.0 31.0 35.0 4.5 35.0 92-93 29.948463598159208 34.0 31.0 35.0 2.0 35.0 94-95 29.8527786240035 34.0 31.0 35.0 2.0 35.0 96-97 29.65473195474794 34.0 31.0 35.0 2.0 35.0 98-99 29.462139256764598 34.0 31.0 35.0 2.0 35.0 100-101 28.351070735915087 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65377.0 3 22248.0 4 12273.0 5 8723.0 6 7738.0 7 7929.0 8 8292.0 9 8835.0 10 9689.0 11 10560.0 12 11008.0 13 11687.0 14 12407.0 15 13150.0 16 14061.0 17 14990.0 18 14565.0 19 13302.0 20 12604.0 21 12814.0 22 13595.0 23 15158.0 24 18431.0 25 21919.0 26 26803.0 27 32753.0 28 38934.0 29 47351.0 30 57672.0 31 71482.0 32 91335.0 33 120288.0 34 172560.0 35 259596.0 36 461450.0 37 886650.0 38 870136.0 39 86178.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.166048707203466 19.04280184348281 13.67714570914062 26.114003740173104 2 15.22318490606463 20.683161767803334 37.441495266197414 26.652158059934628 3 18.058714929783537 24.591121250869456 28.44282198390628 28.907341835440725 4 13.43529097321401 16.856071438236597 34.65704172559265 35.051595862956745 5 14.866781263429306 36.85794652275099 33.6081516249114 14.667120588908297 6 34.117784580601985 34.92036036679455 16.88689980831138 14.074955244292095 7 29.617407402447842 31.283644446825036 20.575029906174954 18.523918244552164 8 27.167890811216154 34.361943946008196 19.496343188980244 18.973822053795406 9 26.955590446093 15.79157627860057 18.77033731487185 38.482495960434576 10-11 26.02652072272507 25.0253471813725 27.30946141722877 21.63867067867366 12-13 26.672580041536833 22.29607818822526 27.135527828687138 23.895813941550767 14-15 23.819712195693537 23.780556191028854 24.30756504611676 28.09216656716085 16-17 24.325367466545256 26.839941147325852 24.94905907139095 23.885632314737943 18-19 24.28070419179585 26.305587591833458 26.123720106525973 23.289988109844725 20-21 24.860675772544525 25.401819957375217 25.978519665524214 23.758984604556044 22-23 24.69799505878572 25.119987367988788 25.79037947365132 24.391638099574173 24-25 24.586817121006842 25.333932390678193 25.672192417367956 24.40705807094701 26-27 24.261003381020256 25.574799946769645 25.75413155988094 24.41006511232916 28-29 24.471240977408367 25.721751532222427 25.549446257270525 24.25756123309868 30-31 24.701788231243327 25.527396168061955 25.34201176398534 24.428803836709374 32-33 24.557336816865146 25.540707267817712 25.24162258775001 24.660333327567127 34-35 24.72219195800874 25.6033990532548 25.368421654693428 24.305987334043028 36-37 24.860440127458105 25.379356368099653 25.465967952458346 24.2942355519839 38-39 24.75384595641733 25.471789438210273 25.35312720390655 24.42123740146585 40-41 24.828576418453764 25.327712116629968 25.439125587686185 24.404585877230083 42-43 24.75024806745928 25.330683374409368 25.222793385369958 24.696275172761393 44-45 24.60123213734943 25.344844590633013 25.39704505212304 24.656878219894512 46-47 24.7226376809896 25.35240993518843 25.28302576365134 24.641926620170622 48-49 24.57899062095492 25.396785096646724 25.278711773168645 24.74551250922971 50-51 24.589624717441325 25.482736807011992 25.3573334133088 24.570305062237885 52-53 24.888114123872633 25.251642090180493 25.268841352774313 24.591402433172565 54-55 24.401421108304337 25.161788540881 25.515628829544145 24.92116152127052 56-57 24.447028589946097 25.32156313337004 25.445424488445905 24.785983788237957 58-59 24.58085999750835 25.201944042307208 25.359966885934348 24.85722907425009 60-61 24.535289174482294 25.26352631719914 25.57979695737377 24.621387550944796 62-63 24.53006587797632 25.305832136029693 25.449187679822266 24.714914306171725 64-65 24.322985436696758 25.112746218511788 25.454913094916144 25.109355249875314 66-67 24.347126519242398 25.253071563768508 25.348218962679802 25.051582954309286 68-69 24.438169239069786 25.197357752113135 25.384576522724302 24.979896486092777 70-71 24.300960118993114 25.033849275388214 25.431665501600197 25.233525104018472 72-73 24.32122887995143 25.22348491772448 25.288090250999396 25.167195951324693 74-75 24.290752211679397 25.330201414386504 25.27172559478671 25.10732077914739 76-77 24.296401498866317 25.002408303074002 25.40708710814742 25.29410308991227 78-79 24.194150738853672 25.138657658997165 25.498154698207472 25.169036903941695 80-81 24.341957506562174 25.22268819883406 25.300017517742823 25.135336776860946 82-83 24.305522030160855 25.17840703509595 25.404651126448613 25.11141980829458 84-85 24.185650091287354 25.226529687719374 25.360592724421604 25.227227496571665 86-87 24.12705365271086 25.327915830214348 25.296872526760193 25.248157990314603 88-89 23.981193788174934 25.126810841468295 25.39298874584823 25.499006624508542 90-91 23.92726026247307 25.16007219408456 25.455690181044854 25.456977362397517 92-93 24.01573940493784 25.0133248181035 25.52569006787109 25.445245709087576 94-95 23.89545599373248 24.939540103018977 25.536396746381474 25.628607156867066 96-97 23.82585896272966 24.80209977502809 25.6150315722392 25.757009690003052 98-99 23.597044228469006 24.81273255428737 25.608740379619267 25.981482837624366 100-101 23.58889764873465 24.84251805951004 25.6320340306059 25.936550261149417 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 38.0 2 44.0 3 65.0 4 63.5 5 73.0 6 120.5 7 320.5 8 506.5 9 509.5 10 427.0 11 344.5 12 323.5 13 338.0 14 367.5 15 405.5 16 496.5 17 581.5 18 626.0 19 702.5 20 767.5 21 849.0 22 1031.0 23 1174.0 24 1353.5 25 1683.5 26 2120.5 27 2645.0 28 3416.0 29 4510.5 30 6312.5 31 9355.5 32 14182.5 33 19438.0 34 25248.5 35 32884.0 36 43224.5 37 54828.0 38 66096.5 39 77438.0 40 88326.5 41 98533.0 42 109464.0 43 120538.5 44 130964.0 45 141088.5 46 150135.5 47 157541.0 48 164414.5 49 169113.0 50 168990.0 51 168862.0 52 168613.0 53 167084.5 54 164856.0 55 157514.5 56 145423.0 57 131257.0 58 119222.5 59 104771.0 60 85693.0 61 70904.0 62 58752.0 63 44856.5 64 32228.0 65 23683.5 66 17644.0 67 13359.0 68 9983.0 69 7334.0 70 5607.5 71 4020.5 72 2668.0 73 1992.5 74 1510.5 75 1036.0 76 667.0 77 388.0 78 224.0 79 125.5 80 77.0 81 44.0 82 28.5 83 16.5 84 10.0 85 9.5 86 9.0 87 6.5 88 3.0 89 3.5 90 3.5 91 3.0 92 3.5 93 2.0 94 1.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17017506271369526 2 1.3948775632270102E-4 3 0.011521688672255104 4 0.00683490005981235 5 0.026893239419016758 6 0.0023712918574859175 7 0.0 8 0.0 9 0.0 10-11 0.05017374594927555 12-13 4.0451449333583293E-4 14-15 0.004575198407384593 16-17 0.0 18-19 0.0018412383834596536 20-21 2.650267370131319E-4 22-23 0.0 24-25 6.555924547166948E-4 26-27 0.0034313988055384454 28-29 0.005802690663024362 30-31 0.01784048403367346 32-33 0.012330717658926769 34-35 0.010308145192247606 36-37 0.004198581465313301 38-39 0.0 40-41 0.00412883758715195 42-43 0.009415423551782319 44-45 0.007936853334761688 46-47 0.004268325343474651 48-49 0.009220140692930538 50-51 0.0031105769659962325 52-53 0.002454984511279538 54-55 0.004421761875429622 56-57 0.00821582884740709 58-59 0.015859757893891106 60-61 0.007588133943954935 62-63 0.022234348357838545 64-65 0.04176263424301668 66-67 0.0615838444164725 68-69 0.05124780167296035 70-71 0.06940910754617603 72-73 0.03483009275377844 74-75 0.028218373104082414 76-77 0.23362804306489193 78-79 0.08791913281019845 80-81 0.06866982243766571 82-83 0.028594990046153707 84-85 0.053033244953890925 86-87 0.06837689814938804 88-89 0.29623014810252013 90-91 0.302521045912674 92-93 0.05421889088263388 94-95 0.009764142942589071 96-97 0.015092575234116251 98-99 8.787728648330164E-4 100-101 1.6738530758724122E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3584544.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.10584512014296 #Duplication Level Percentage of deduplicated Percentage of total 1 73.68317218887722 39.13007130223338 2 13.478387399949998 14.315623074620618 3 5.039232798663026 8.028381495904295 4 2.4246903673793607 5.150609244574034 5 1.3994008649063832 3.7158182796356236 6 0.8548148266987892 2.723739827584064 7 0.5846446647235728 2.173363431058957 8 0.41122797988593546 1.7470887527113403 9 0.3275196284220173 1.5653885994707781 >10 1.6939455325238113 15.84137381168014 >50 0.08017654157645471 2.8769152491453123 >100 0.02104878825426374 1.8085092181770421 >500 0.001211624768464835 0.4732667340951843 >1k 5.267933707720062E-4 0.4498509791092621 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7897551264540205E-5 2 0.0 0.0 0.0 0.0 2.7897551264540205E-5 3 0.0 2.7897551264540205E-5 0.0 0.0 2.7897551264540205E-5 4 0.0 2.7897551264540205E-5 0.0 0.0 2.7897551264540205E-5 5 0.0 2.7897551264540205E-5 0.0 0.0 2.7897551264540205E-5 6 0.0 2.7897551264540205E-5 0.0 0.0 5.579510252908041E-5 7 0.0 2.7897551264540205E-5 0.0 0.0 5.579510252908041E-5 8 0.0 2.7897551264540205E-5 0.0 0.0 5.579510252908041E-5 9 0.0 2.7897551264540205E-5 0.0 0.0 8.369265379362061E-5 10-11 0.0 2.7897551264540205E-5 0.0 0.0 8.369265379362061E-5 12-13 0.0 4.1846326896810306E-5 0.0 1.3948775632270103E-5 3.9056571770356287E-4 14-15 0.0 6.974387816135051E-5 0.0 2.7897551264540205E-5 4.603095958649134E-4 16-17 0.0 8.369265379362061E-5 0.0 2.7897551264540205E-5 5.161046983939938E-4 18-19 0.0 9.764142942589072E-5 0.0 4.1846326896810306E-5 5.997973521876144E-4 20-21 0.0 1.1159020505816082E-4 0.0 5.579510252908041E-5 7.253363328780453E-4 22-23 0.0 1.1159020505816082E-4 0.0 8.369265379362061E-5 8.22977762303936E-4 24-25 0.0 1.3948775632270102E-4 0.0 2.0923163448405155E-4 8.648240892007463E-4 26-27 0.0 1.6738530758724122E-4 0.0 3.0687306390994227E-4 9.345679673620968E-4 28-29 0.0 1.6738530758724122E-4 0.0 0.00136698001196247 9.485167429943669E-4 30-31 0.0 1.6738530758724122E-4 0.0 0.006904643937973701 9.624655186266371E-4 32-33 0.0 1.6738530758724122E-4 0.0 0.02233198978726443 0.0010322093967879875 34-35 0.0 1.9528285885178143E-4 0.0 0.044315260183722116 0.0011159020505816081 36-37 0.0 2.5107796138086185E-4 0.0 0.08041469152003713 0.001129850826213878 38-39 0.0 3.4871939080675257E-4 0.0 0.13975278305971414 0.0011577483774784184 40-41 0.0 4.0451449333583293E-4 0.0 0.20826916896542488 0.0011716971531106886 42-43 0.0 4.463608202326433E-4 0.0 0.28233716757277916 0.0011716971531106886 44-45 0.0 4.463608202326433E-4 0.0 0.37439908674576183 0.0011995947043752287 46-47 0.0 4.463608202326433E-4 0.0 0.48264158565217785 0.001241441031272039 48-49 0.0 4.7425837149718346E-4 0.0 0.6001042252515243 0.0012553898069043092 50-51 0.0 5.021559227617237E-4 0.0 0.7231324263281467 0.0013390824606979298 52-53 0.0 5.300534740262638E-4 0.0 0.8506521331583599 0.0014506726657560905 54-55 0.0 5.300534740262638E-4 0.0 1.0007967540641152 0.0015901604220787916 56-57 0.0 5.300534740262638E-4 0.0 1.1733570574109287 0.0016320067489756019 58-59 0.0 5.300534740262638E-4 0.0 1.3550259112456144 0.001645955524607872 60-61 0.0 5.300534740262638E-4 0.0 1.553614629922244 0.001645955524607872 62-63 0.0 5.300534740262638E-4 0.0 1.761535079496862 0.0017854432809305731 64-65 0.0 5.300534740262638E-4 0.0 1.9840180508315701 0.0017854432809305731 66-67 0.0 5.579510252908041E-4 0.0 2.243144455752252 0.0018412383834596536 68-69 0.0 5.579510252908041E-4 0.0 2.5293872805020667 0.0018691359347241937 70-71 0.0 5.579510252908041E-4 0.0 2.8304437049733524 0.001883084710356464 72-73 0.0 5.579510252908041E-4 0.0 3.1510144665541837 0.0020225724666791648 74-75 0.0 5.579510252908041E-4 0.0 3.493108188935608 0.002064418793575975 76-77 0.0 5.858485765553443E-4 0.0 3.8729194006266905 0.002064418793575975 78-79 0.0 5.858485765553443E-4 0.0 4.298496545167252 0.002078367569208245 80-81 0.0 5.858485765553443E-4 0.0 4.736669434103752 0.0021341626717373257 82-83 0.0 5.858485765553443E-4 0.0 5.2049995759572205 0.0022875992036922965 84-85 0.0 5.858485765553443E-4 0.0 5.700641420498675 0.0022875992036922965 86-87 0.0 5.858485765553443E-4 0.0 6.229760326557576 0.0023712918574859175 88-89 0.0 5.858485765553443E-4 0.0 6.802971312390083 0.002427086960014998 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4550 0.0 47.855446 1 GGTATCA 2490 0.0 44.678 1 TCAACGC 6050 0.0 35.06919 4 TATCAAC 6310 0.0 34.000294 2 CAACGCA 6310 0.0 33.6533 5 ATCAACG 6330 0.0 33.517952 3 AACGCAG 6760 0.0 31.265968 6 GTACATG 10245 0.0 26.35807 1 ACGCAGA 8245 0.0 25.057919 7 TACATGG 11055 0.0 23.914982 2 CGCAGAG 8645 0.0 23.51393 8 ACATGGG 11300 0.0 22.7244 3 GTATACG 235 4.609319E-9 22.25369 1 CATGGGG 9770 0.0 20.210281 4 GCAGAGT 10000 0.0 18.522985 9 AGAGTAC 8190 0.0 18.03528 10-11 TAAGGTA 970 0.0 17.615881 4 ATGGGGG 5535 0.0 17.50903 5 GTATAGG 760 0.0 16.889914 1 GTGTAAG 1825 0.0 16.41175 1 >>END_MODULE