##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921683_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3103926 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.242085346106833 31.0 31.0 34.0 26.0 34.0 2 30.3082567045735 31.0 31.0 34.0 26.0 34.0 3 30.374988321242196 33.0 31.0 34.0 26.0 34.0 4 33.816806843977595 37.0 35.0 37.0 29.0 37.0 5 33.81317885800112 37.0 35.0 37.0 29.0 37.0 6 33.846026612747856 37.0 35.0 37.0 29.0 37.0 7 33.76166764284973 37.0 35.0 37.0 29.0 37.0 8 33.72815234641548 37.0 35.0 37.0 29.0 37.0 9 35.269965843257864 39.0 35.0 39.0 29.0 39.0 10-11 35.16823951344201 39.0 35.0 39.0 28.0 39.0 12-13 35.06147375936153 39.0 35.0 39.0 27.0 39.0 14-15 36.190289330351305 40.0 36.0 41.0 27.0 41.0 16-17 36.131441922262326 40.0 36.0 41.0 27.0 41.0 18-19 36.09119676177847 40.0 36.5 41.0 27.0 41.0 20-21 36.018900740546 40.0 36.0 41.0 27.0 41.0 22-23 35.91686560826514 40.0 36.0 41.0 27.0 41.0 24-25 35.814447734900895 40.0 36.0 41.0 27.0 41.0 26-27 35.670992961816744 40.0 36.0 41.0 26.5 41.0 28-29 35.53032208242078 40.0 36.0 41.0 25.5 41.0 30-31 35.38988590578512 40.0 36.0 41.0 25.0 41.0 32-33 35.22512827303228 39.0 35.0 41.0 24.5 41.0 34-35 35.0576569802244 39.0 35.0 41.0 24.0 41.0 36-37 35.03213333694167 39.0 35.0 41.0 24.0 41.0 38-39 35.214847100091944 39.5 35.0 41.0 24.5 41.0 40-41 35.27911941199629 40.0 35.0 41.0 24.0 41.0 42-43 35.12907121497098 40.0 35.0 41.0 23.5 41.0 44-45 35.01631417759315 40.0 35.0 41.0 23.0 41.0 46-47 34.867035006633536 40.0 35.0 41.0 22.5 41.0 48-49 34.71136683026593 39.0 35.0 41.0 21.5 41.0 50-51 33.04010469321756 37.0 32.5 39.5 17.0 40.0 52-53 33.15767289555228 37.5 32.5 39.5 16.5 40.0 54-55 34.0718570610253 39.0 34.0 40.5 18.0 41.0 56-57 34.09705627647051 39.0 34.0 41.0 18.0 41.0 58-59 33.91718520351323 38.5 34.0 41.0 16.0 41.0 60-61 33.66554067332791 38.0 34.0 40.0 13.5 41.0 62-63 33.380889396203386 37.5 33.5 40.0 12.5 41.0 64-65 33.09494040772879 37.0 33.0 40.0 9.5 41.0 66-67 32.757685428067546 36.5 33.0 39.5 7.5 41.0 68-69 32.40380183032714 36.0 33.0 39.0 6.0 41.0 70-71 31.996624919537386 35.0 32.0 39.0 2.0 40.5 72-73 31.63800361219952 35.0 32.0 37.5 2.0 40.0 74-75 31.239756521257274 35.0 32.0 37.0 2.0 39.0 76-77 30.864673481262116 35.0 31.5 37.0 2.0 39.0 78-79 30.523598178564825 35.0 31.0 36.0 2.0 38.5 80-81 30.214767523452558 35.0 31.0 36.0 2.0 37.0 82-83 29.909870757228106 35.0 31.0 35.0 2.0 37.0 84-85 29.65495134226782 35.0 31.0 35.0 2.0 36.5 86-87 29.432393684643255 35.0 31.0 35.0 2.0 36.0 88-89 29.22214092732881 35.0 30.5 35.0 2.0 36.0 90-91 29.01637990080949 34.0 30.0 35.0 2.0 35.5 92-93 28.839211695124174 34.0 30.0 35.0 2.0 35.0 94-95 28.62779557244599 34.0 30.0 35.0 2.0 35.0 96-97 28.413758575429956 34.0 30.0 35.0 2.0 35.0 98-99 28.165114761112218 34.0 29.5 35.0 2.0 35.0 100-101 27.11915892969098 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 114823.0 3 19388.0 4 12911.0 5 9965.0 6 8840.0 7 9180.0 8 9532.0 9 10267.0 10 11302.0 11 12064.0 12 11820.0 13 12020.0 14 12500.0 15 13131.0 16 13189.0 17 13445.0 18 13281.0 19 12657.0 20 12778.0 21 13220.0 22 14774.0 23 16783.0 24 19683.0 25 23415.0 26 27478.0 27 32654.0 28 38667.0 29 45939.0 30 55136.0 31 66767.0 32 83482.0 33 108220.0 34 148664.0 35 215630.0 36 360719.0 37 658354.0 38 719140.0 39 122090.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.182048037195074 17.71842985920977 13.223154348354438 24.87636775524071 2 15.591594759491942 19.00577234818247 40.13738988239937 25.26524300992622 3 19.498570512977576 23.402030812957072 28.480771884305046 28.61862678976031 4 13.111176090736201 15.665702826108612 36.906829426657254 34.316291656497924 5 14.636594048017413 36.75181933475566 34.2882785647001 14.323308052526823 6 33.85653236774468 35.036291737431284 17.294888933783003 13.812286961041037 7 29.59235523895356 30.891947861631554 20.79899185148691 18.716705047927977 8 26.552347919784186 34.93578713603151 19.5910779950429 18.9207869491414 9 26.42543856116304 16.11548559813051 19.11249339101449 38.346582449691965 10-11 25.72618687047694 25.16756671413934 27.752824194307145 21.353422221076578 12-13 26.43355958315724 22.32711480641212 27.558917087901015 23.680408522529625 14-15 23.442239260214926 23.931194341515674 24.759559215261095 27.8670071830083 16-17 23.940843155506496 26.9817786207231 25.374133075830756 23.703245147939644 18-19 23.87654206426535 26.46537991617563 26.474353273841743 23.183724745717278 20-21 24.478853074776122 25.694710847902257 26.407172826165237 23.41926325115638 22-23 24.16303814129261 25.529977412661186 26.182120953853794 24.124863492192404 24-25 24.055712038982634 25.64871153623039 26.203350392533487 24.092226032253492 26-27 23.997594171230496 25.845226197367865 26.0847134651813 24.07246616622034 28-29 24.1066911889325 25.920809363656222 25.96437204332811 24.00812740408316 30-31 24.301966055908448 25.75385668265039 25.901299598462934 24.04287766297823 32-33 24.04332718526823 25.777748493605912 25.873344488884424 24.305579832241435 34-35 24.326482113089273 25.8732905510639 25.87934768530481 23.92087965054202 36-37 24.429807336366714 25.605245260247813 25.86480522773395 24.100142175651527 38-39 24.197985184650598 25.805284991855164 25.858864336969294 24.13786548652494 40-41 24.520623479836587 25.594755503678197 25.89553824436761 23.989082772117605 42-43 24.250059332664932 25.582033261811237 25.840755970803485 24.327151434720346 44-45 24.259941211067503 25.683616636247837 25.95932291367401 24.09711923901065 46-47 24.387774306713457 25.65461234933448 25.712623637162473 24.24498970678958 48-49 24.2155605069395 25.719281066799937 25.7567150790626 24.30844334719796 50-51 24.2898244283126 25.77208365783092 25.786061601410708 24.152030312445778 52-53 24.435725271475594 25.6921675303695 25.744080095147208 24.128027103007703 54-55 24.111990049116827 25.554890707026328 26.035050520327818 24.298068723529028 56-57 24.14520322533938 25.723506872966222 25.941809526253863 24.18948037544053 58-59 24.277243424947205 25.587306056182303 25.909284555541333 24.22616596332916 60-61 24.226953913153817 25.592169010610142 26.06404120458579 24.116835871650245 62-63 24.17376336088074 25.61586198725517 26.028475878987685 24.181898772876405 64-65 24.05865781065959 25.53157591696815 25.967548312646883 24.442217959725376 66-67 24.05303938246299 25.610827913517316 25.9369449944563 24.399187709563392 68-69 24.17690239233523 25.496770299017697 25.961856924730697 24.364470383916377 70-71 24.042693258847855 25.353096710563584 25.971888477716732 24.63232155287183 72-73 24.046015549641474 25.455871661869544 25.90115479524756 24.596957993241418 74-75 24.090344015647553 25.552750281899332 25.903280362406495 24.45362534004662 76-77 24.082453680853764 25.322983986940866 26.01419215348159 24.58037017872378 78-79 24.0168801191591 25.348041072890354 26.01723751897375 24.6178412889768 80-81 24.089823889794054 25.468641327616904 25.894968030744213 24.54656675184483 82-83 24.044220376683967 25.442683250895442 25.986243812314765 24.526852560105826 84-85 24.029511302592553 25.480667714046056 25.969148800841 24.520672182520386 86-87 23.974073285288963 25.5345330270455 25.99141362855975 24.49998005910578 88-89 23.964227493688455 25.329446009538238 26.010351953168705 24.695974543604603 90-91 23.846320525957 25.421588740712224 26.04835696563964 24.68373376769113 92-93 23.93133676125334 25.265703626408275 26.19182972751604 24.61112988482234 94-95 23.84655079322843 25.199582654118302 26.207684150156684 24.746182402496583 96-97 23.83783528919369 25.09930547526793 26.240624109883846 24.82223512565453 98-99 23.755807780391304 25.039864914612547 26.2086383346444 24.995688970351743 100-101 23.856599110998584 24.90749256904875 26.297994385934093 24.937913934018578 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 14.5 2 29.0 3 44.5 4 39.0 5 46.5 6 78.5 7 184.5 8 315.5 9 354.0 10 329.0 11 339.5 12 412.5 13 477.5 14 550.5 15 637.5 16 726.5 17 827.0 18 921.0 19 987.5 20 1053.5 21 1139.5 22 1252.0 23 1432.0 24 1632.0 25 1993.5 26 2464.5 27 3114.0 28 4197.0 29 5861.5 30 8492.5 31 12750.5 32 18840.5 33 25169.5 34 31545.0 35 39269.0 36 49055.0 37 58696.5 38 67990.5 39 77247.0 40 85498.0 41 94067.0 42 102147.0 43 109630.0 44 116626.5 45 124086.0 46 129565.0 47 133190.5 48 136836.5 49 138785.0 50 138117.5 51 137152.0 52 136671.5 53 134942.0 54 132369.5 55 125887.0 56 116158.0 57 104835.5 58 94329.0 59 82934.5 60 69291.5 61 57723.5 62 47157.0 63 35918.0 64 25921.5 65 18958.5 66 14144.5 67 10669.0 68 7938.5 69 5829.5 70 4319.5 71 3145.0 72 2250.5 73 1624.0 74 1185.5 75 878.5 76 634.5 77 413.0 78 289.5 79 222.0 80 170.0 81 139.0 82 116.5 83 98.0 84 84.5 85 73.5 86 62.5 87 55.5 88 46.5 89 31.5 90 25.5 91 30.5 92 28.5 93 19.0 94 17.5 95 20.0 96 17.0 97 11.0 98 9.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05090327540025116 2 0.07223110344769818 3 0.06810729379501959 4 0.06762403485134633 5 0.06340357340993309 6 0.010535044972077297 7 0.013370164108293819 8 0.016044196929952584 9 0.00634680079357562 10-11 0.012435863483858828 12-13 0.02079624320940641 14-15 0.038241891076011475 16-17 0.025306660017023603 18-19 0.009471875295996104 20-21 0.019410900904209702 22-23 0.03484296983884281 24-25 0.03241056648902068 26-27 0.02028076700282159 28-29 0.011340476544866081 30-31 0.011340476544866081 32-33 0.007716034467316554 34-35 0.004768154910909603 36-37 6.121279953194761E-4 38-39 0.0038016370235630617 40-41 7.893229413330086E-4 42-43 0.2249087123855401 44-45 0.1953654822956475 46-47 0.20145454498593074 48-49 0.20862288598375092 50-51 0.19937653152813567 52-53 0.20651265526304427 54-55 0.20333925486625648 56-57 0.20591663589918058 58-59 0.21487303498859187 60-61 0.21891630148399158 62-63 0.20480514032873207 64-65 0.20514342158930335 66-67 0.20185726077232513 68-69 0.19704077996704816 70-71 0.18919587644808541 72-73 0.20084241699061126 74-75 0.19939264015959146 76-77 0.1938512709388046 78-79 0.21116804975376346 80-81 0.22191250693476583 82-83 0.22059159915539225 84-85 0.21495357814587074 86-87 0.23436447905008043 88-89 0.22624572879636948 90-91 0.23347850432001277 92-93 0.22879089256638208 94-95 0.23241533464393158 96-97 0.23905209080371118 98-99 0.2325442036955778 100-101 0.23898765627788807 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3103926.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.40012353092905 #Duplication Level Percentage of deduplicated Percentage of total 1 79.94979741614875 51.48776829872732 2 11.657276001300723 15.014600290358024 3 3.5972424737716424 6.949885790447959 4 1.6401536165023416 4.225043820498033 5 0.8643334292706766 2.783158980847155 6 0.5469347407883405 2.1133598922075474 7 0.34172897368499533 1.5405171683587913 8 0.2516420117701585 1.2964621314855769 9 0.1920392442275588 1.1130615945936937 >10 0.907133606591331 10.110809184281942 >50 0.04001705794385853 1.7264285291822619 >100 0.010748695868735962 1.1234164792312524 >500 6.017255569064052E-4 0.2605695284919851 >1k 3.510065739385193E-4 0.25491831128851267 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.665178873465411E-5 2 0.0 0.0 0.0 0.0 9.665178873465411E-5 3 0.0 0.0 0.0 0.0 9.665178873465411E-5 4 0.0 0.0 0.0 3.221726291155137E-5 9.665178873465411E-5 5 0.0 9.665178873465411E-5 0.0 3.221726291155137E-5 9.665178873465411E-5 6 0.0 9.665178873465411E-5 0.0 3.221726291155137E-5 9.665178873465411E-5 7 0.0 1.2886905164620548E-4 0.0 3.221726291155137E-5 9.665178873465411E-5 8 0.0 1.2886905164620548E-4 0.0 3.221726291155137E-5 1.2886905164620548E-4 9 0.0 1.2886905164620548E-4 0.0 6.443452582310274E-5 1.2886905164620548E-4 10-11 0.0 1.2886905164620548E-4 0.0 6.443452582310274E-5 1.2886905164620548E-4 12-13 0.0 1.2886905164620548E-4 0.0 1.1276042019042978E-4 1.7719494601353252E-4 14-15 0.0 1.2886905164620548E-4 0.0 1.2886905164620548E-4 2.2552084038085957E-4 16-17 3.221726291155137E-5 1.2886905164620548E-4 0.0 1.7719494601353252E-4 2.8995536620396233E-4 18-19 3.221726291155137E-5 1.2886905164620548E-4 0.0 2.255208403808596E-4 2.8995536620396233E-4 20-21 3.221726291155137E-5 1.2886905164620548E-4 0.0 2.5773810329241095E-4 2.8995536620396233E-4 22-23 3.221726291155137E-5 1.2886905164620548E-4 0.0 2.8995536620396233E-4 3.06063997659738E-4 24-25 3.221726291155137E-5 1.2886905164620548E-4 0.0 3.221726291155137E-4 3.221726291155137E-4 26-27 3.221726291155137E-5 1.2886905164620548E-4 0.0 4.3493304930594353E-4 3.8660715493861643E-4 28-29 3.221726291155137E-5 1.4497768310198117E-4 0.0 8.054315727887842E-4 3.8660715493861643E-4 30-31 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.0035600075517264267 3.8660715493861643E-4 32-33 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.012484189378226157 4.188244178501678E-4 34-35 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.0234541673996094 4.510416807617192E-4 36-37 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.04368660850806366 4.6715031221749486E-4 38-39 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.08086532990799394 5.154762065848219E-4 40-41 3.221726291155137E-5 1.6108631455775686E-4 0.0 0.1271937539748048 5.154762065848219E-4 42-43 3.221726291155137E-5 1.9330357746930821E-4 0.0 0.17677612159568235 5.154762065848219E-4 44-45 3.221726291155137E-5 1.9330357746930821E-4 0.0 0.23602366809002534 5.154762065848219E-4 46-47 3.221726291155137E-5 1.9330357746930821E-4 0.0 0.3091407462677912 5.63802100952149E-4 48-49 3.221726291155137E-5 1.9330357746930821E-4 0.0 0.3857211802085488 5.960193638637004E-4 50-51 6.443452582310274E-5 1.9330357746930821E-4 0.0 0.4738837201660091 6.765625211425788E-4 52-53 9.665178873465411E-5 1.9330357746930821E-4 0.0 0.5652035518888014 7.248884155099059E-4 54-55 9.665178873465411E-5 2.5773810329241095E-4 0.0 0.6673967098442424 7.732143098772329E-4 56-57 9.665178873465411E-5 2.8995536620396233E-4 0.0 0.7844259173704528 7.893229413330086E-4 58-59 9.665178873465411E-5 2.8995536620396233E-4 0.0 0.9167744334111059 8.054315727887843E-4 60-61 9.665178873465411E-5 2.8995536620396233E-4 0.0 1.0645066924920248 8.376488357003356E-4 62-63 9.665178873465411E-5 2.8995536620396233E-4 0.0 1.2170393237467647 8.376488357003356E-4 64-65 9.665178873465411E-5 3.221726291155137E-4 0.0 1.3788988526143986 8.376488357003356E-4 66-67 9.665178873465411E-5 3.543898920270651E-4 0.0 1.5669026903347567 8.376488357003356E-4 68-69 9.665178873465411E-5 3.543898920270651E-4 0.0 1.772545479499189 8.376488357003356E-4 70-71 9.665178873465411E-5 3.7049852348284076E-4 0.0 2.0019323914294347 8.698660986118871E-4 72-73 9.665178873465411E-5 3.8660715493861643E-4 0.0 2.2501341849000265 9.343006244349898E-4 74-75 9.665178873465411E-5 3.8660715493861643E-4 0.0 2.5019282031852565 9.987351502580926E-4 76-77 9.665178873465411E-5 3.8660715493861643E-4 0.0 2.7744862474169807 9.987351502580926E-4 78-79 9.665178873465411E-5 4.188244178501678E-4 0.0 3.0837558627364183 0.0010470610446254194 80-81 9.665178873465411E-5 4.510416807617192E-4 0.0 3.419137569645668 0.0010631696760811952 82-83 9.665178873465411E-5 4.510416807617192E-4 0.0 3.7775224022737657 0.0010953869389927467 84-85 9.665178873465411E-5 4.6715031221749486E-4 0.0 4.153449534557202 0.0011114955704485223 86-87 1.2886905164620548E-4 4.993675751290463E-4 0.0 4.543487827995899 0.001175930096271625 88-89 1.2886905164620548E-4 5.154762065848219E-4 0.0 4.968191896327426 0.001224255990638952 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3755 0.0 44.10905 1 TCAACGC 4215 0.0 38.62342 4 CAACGCA 4370 0.0 36.923485 5 GGTATCA 2125 0.0 36.40331 1 ATCAACG 4510 0.0 35.779606 3 AACGCAG 4625 0.0 34.872524 6 TATCAAC 4865 0.0 33.46143 2 ACGCAGA 5660 0.0 27.91213 7 CGCAGAG 5790 0.0 26.633362 8 GTACATG 7990 0.0 24.709206 1 TACATGG 8395 0.0 22.670279 2 ACATGGG 8405 0.0 21.852766 3 GCAGAGT 7420 0.0 20.335339 9 CATGGGG 6990 0.0 19.21602 4 AGAGTAC 5995 0.0 18.876757 10-11 GAGTACA 5850 0.0 18.415443 1 GTATAGC 970 0.0 18.102652 1 TACACCG 510 0.0 17.680258 5 GTATAGG 930 0.0 16.840042 1 AGTACAT 5840 0.0 16.822506 2 >>END_MODULE