##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921682_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3593289 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.230410913232973 31.0 31.0 34.0 26.0 34.0 2 30.29632378581294 31.0 31.0 34.0 26.0 34.0 3 30.3574769521739 31.0 31.0 34.0 26.0 34.0 4 33.80730856883485 37.0 35.0 37.0 28.0 37.0 5 33.80542561424923 37.0 35.0 37.0 28.0 37.0 6 33.83800384550199 37.0 35.0 37.0 29.0 37.0 7 33.754894471332534 37.0 35.0 37.0 29.0 37.0 8 33.722232472812514 37.0 35.0 37.0 29.0 37.0 9 35.258415340374796 39.0 35.0 39.0 29.0 39.0 10-11 35.154143599359806 39.0 35.0 39.0 28.0 39.0 12-13 35.04864095262029 39.0 35.0 39.0 27.0 39.0 14-15 36.16769177207845 40.0 36.0 41.0 27.0 41.0 16-17 36.10587250287968 40.0 36.0 41.0 27.0 41.0 18-19 36.074917853810256 40.0 36.0 41.0 27.0 41.0 20-21 36.00181658085392 40.0 36.0 41.0 27.0 41.0 22-23 35.89993930351831 40.0 36.0 41.0 27.0 41.0 24-25 35.792929959154414 40.0 36.0 41.0 27.0 41.0 26-27 35.648255817998496 40.0 36.0 41.0 26.5 41.0 28-29 35.512194816503765 40.0 36.0 41.0 25.5 41.0 30-31 35.3704372233906 39.5 35.5 41.0 25.0 41.0 32-33 35.196442312321665 39.0 35.0 41.0 24.5 41.0 34-35 35.02791940754 39.0 35.0 41.0 24.0 41.0 36-37 35.00066165009271 39.0 35.0 41.0 24.0 41.0 38-39 35.18281371189459 39.5 35.0 41.0 24.0 41.0 40-41 35.250281983998505 40.0 35.0 41.0 24.0 41.0 42-43 35.10139429364017 40.0 35.0 41.0 23.5 41.0 44-45 34.988725371101516 40.0 35.0 41.0 23.0 41.0 46-47 34.843855448309334 40.0 35.0 41.0 22.5 41.0 48-49 34.69189466808821 39.0 35.0 41.0 21.0 41.0 50-51 33.02162099959118 37.0 32.5 39.5 17.0 40.0 52-53 33.14595569685601 37.5 32.5 39.5 16.5 40.0 54-55 34.06366214907846 39.0 34.0 40.5 18.0 41.0 56-57 34.0956119866785 39.0 34.0 41.0 18.0 41.0 58-59 33.917991288760795 38.5 34.0 41.0 16.0 41.0 60-61 33.675711026861464 38.0 34.0 40.0 13.5 41.0 62-63 33.39520506143536 37.5 33.5 40.0 12.5 41.0 64-65 33.11140517781898 37.0 33.0 40.0 9.0 41.0 66-67 32.778315771428346 36.5 33.0 39.5 7.5 41.0 68-69 32.420650690773826 36.0 33.0 39.0 4.5 41.0 70-71 32.006452584248024 35.5 32.0 39.0 2.0 40.5 72-73 31.64106992229125 35.0 32.0 38.0 2.0 40.0 74-75 31.23274832611571 35.0 32.0 37.0 2.0 39.0 76-77 30.850068558359766 35.0 31.5 37.0 2.0 39.0 78-79 30.49771073242369 35.0 31.0 36.0 2.0 38.5 80-81 30.175324612075457 35.0 31.0 36.0 2.0 37.0 82-83 29.86152268854523 35.0 31.0 35.0 2.0 37.0 84-85 29.597104769474427 35.0 31.0 35.0 2.0 36.5 86-87 29.361840781523558 35.0 30.5 35.0 2.0 36.0 88-89 29.14193264165504 34.5 30.0 35.0 2.0 36.0 90-91 28.92573864779593 34.0 30.0 35.0 2.0 35.5 92-93 28.73832914636145 34.0 30.0 35.0 2.0 35.0 94-95 28.516642273972398 34.0 30.0 35.0 2.0 35.0 96-97 28.28852062831573 34.0 29.5 35.0 2.0 35.0 98-99 28.031186748407933 34.0 29.0 35.0 2.0 35.0 100-101 26.975076872469764 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 131354.0 3 22044.0 4 14719.0 5 11212.0 6 10267.0 7 10542.0 8 11111.0 9 12048.0 10 13078.0 11 14138.0 12 14040.0 13 13949.0 14 15172.0 15 15397.0 16 15308.0 17 15998.0 18 15493.0 19 15062.0 20 15165.0 21 15918.0 22 17919.0 23 20139.0 24 23846.0 25 28026.0 26 33399.0 27 39286.0 28 45593.0 29 54629.0 30 65078.0 31 78661.0 32 98268.0 33 126071.0 34 173524.0 35 248848.0 36 411246.0 37 748296.0 38 837993.0 39 140439.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75921325293891 18.107623603080114 13.443009678405609 24.69015346557536 2 15.67355853427032 19.738299161790852 39.28088807390144 25.307254230037383 3 18.662758395009295 24.198959805607583 29.43594171012414 27.702340089258982 4 13.306257448166056 16.42435671100127 37.12156214656459 33.147823694268084 5 14.458560092502704 37.14285952990046 34.37164943659015 14.026930941006691 6 32.94185362986186 35.577828718259305 17.710272362104437 13.770045289774396 7 28.685976655221403 31.705778745652356 21.454472782980847 18.153771816145394 8 26.400660024851135 34.36744278225861 20.432434298133494 18.799462894756765 9 26.70466958915486 15.716811617516782 19.573221354406567 38.00529743892179 10-11 25.30416137771539 25.330965070724314 28.284534422218282 21.08033912934201 12-13 26.071249573930285 22.774830452436284 27.78916824649398 23.364751727139456 14-15 23.384581503745856 24.31374721742383 25.15563007157612 27.146041207254196 16-17 23.59620515861251 27.108604786143488 25.904914614676894 23.39027544056711 18-19 23.53547688580222 26.804411796427225 26.92527625914398 22.734835058626572 20-21 24.305748472791386 25.95405653218843 26.6962412268664 23.043953768153784 22-23 24.006763033114 25.818975831455372 26.363899457094814 23.810361678335813 24-25 23.87944166022522 25.93960612983876 26.38309529546526 23.79785691447076 26-27 23.75147077776482 26.15056087885635 26.3333033633803 23.764664979998535 28-29 23.81656158316348 26.328128283424583 26.192511975845406 23.662798157566527 30-31 24.212505968420498 26.01955791034378 26.075028907960313 23.69290721327541 32-33 23.882703312824425 26.060916091785913 26.022048757977856 24.034331837411806 34-35 24.203313516653164 26.159868592616796 26.014186631547513 23.622631259182526 36-37 24.256247658815127 26.013409527711 25.992634555860878 23.73770825761299 38-39 24.0456200430958 26.102682668377327 26.01905148883677 23.832645799690106 40-41 24.323669568310148 25.905384845088754 26.028685443905815 23.742260142695294 42-43 24.078408474951228 25.912929439291055 25.941844904308365 24.066817181449355 44-45 24.063339917297235 25.92673881835859 26.06669627475 23.943224989594174 46-47 24.160322476776937 25.834971064692958 25.882732903109567 24.121973555420535 48-49 23.934850829049807 25.903570435414668 26.0095742304091 24.152004505126424 50-51 24.037090796620184 25.90143378497116 26.068617360178457 23.992858058230198 52-53 24.184765896453147 25.793387981411342 26.083530701506664 23.938315420628847 54-55 23.829715252640433 25.706680753262884 26.264255043625727 24.199348950470952 56-57 23.845896172632077 25.832181418979978 26.172121664468822 24.14980074391912 58-59 24.000163458354802 25.704704950696105 26.19633524137025 24.098796349578844 60-61 24.028796344596536 25.717398035611172 26.237715595997578 24.01609002379471 62-63 23.968405154801633 25.73886559221508 26.261430051640055 24.031299201343227 64-65 23.81336743079624 25.598101304216797 26.234528087943115 24.354003177043843 66-67 23.811172652417927 25.67577291453016 26.123536356428012 24.3895180766239 68-69 23.89721205792998 25.659572741355284 26.166883292636655 24.276331908078078 70-71 23.818237641659362 25.41301831382727 26.217735798229718 24.55100824628365 72-73 23.75229602409229 25.596868649851373 26.12980003603356 24.521035290022773 74-75 23.80551901649508 25.623395571907455 26.102745591409153 24.468339820188312 76-77 23.697746362530232 25.401548830206234 26.247523915842557 24.653180891420973 78-79 23.669869481629313 25.419458582714284 26.318310855053273 24.59236108060313 80-81 23.772868814444674 25.47917022634312 26.165027181398788 24.582933777813423 82-83 23.716161762404457 25.487978343751106 26.28065808975214 24.515201804092293 84-85 23.725006478420095 25.468085029228902 26.255676811495967 24.551231680855036 86-87 23.661429663720547 25.500204857058318 26.25546268051241 24.582902798708727 88-89 23.628776441735315 25.28680012894376 26.301332525784215 24.783090903536706 90-91 23.562257366522903 25.336023258496887 26.355054218629704 24.746665156350506 92-93 23.627575101369203 25.17514678796191 26.497535725425188 24.699742385243702 94-95 23.49333261538277 25.17558285472675 26.464880708840404 24.866203821050078 96-97 23.45491537870669 25.0787870738697 26.531008276444346 24.935289270979265 98-99 23.320857082314937 24.97167838474515 26.511724193153068 25.195740339786845 100-101 23.49395346449332 24.80453025248783 26.64818542550777 25.05333085751108 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 37.5 2 49.0 3 62.5 4 60.0 5 83.5 6 141.0 7 284.5 8 440.0 9 490.5 10 474.0 11 469.5 12 517.0 13 605.5 14 733.0 15 836.0 16 922.5 17 1042.0 18 1148.5 19 1216.5 20 1331.0 21 1453.5 22 1559.5 23 1663.0 24 1823.5 25 2142.0 26 2537.5 27 3249.0 28 4241.5 29 5920.5 30 8977.5 31 13558.0 32 20508.0 33 28401.5 34 36814.0 35 46590.5 36 58632.5 37 71452.0 38 83807.5 39 95252.5 40 105488.5 41 115164.0 42 124506.5 43 134274.0 44 143624.5 45 153100.0 46 159552.5 47 163642.0 48 167730.0 49 168436.0 50 165186.5 51 160958.0 52 157387.0 53 154132.0 54 148761.0 55 138977.5 56 126502.0 57 112361.5 58 99873.5 59 87089.0 60 71359.5 61 57853.0 62 46744.0 63 35226.0 64 25167.0 65 18345.0 66 13591.5 67 10356.0 68 7757.5 69 5672.5 70 4206.5 71 2997.5 72 2046.5 73 1451.0 74 1081.5 75 749.0 76 510.0 77 376.5 78 271.5 79 180.5 80 137.0 81 129.0 82 106.0 83 89.0 84 83.5 85 82.0 86 73.5 87 55.5 88 45.0 89 42.0 90 32.5 91 31.5 92 30.0 93 18.5 94 21.5 95 22.5 96 15.0 97 9.0 98 6.5 99 9.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.055520165508535495 2 0.07728295720160555 3 0.07274672312747457 4 0.07347029420678382 5 0.06887840081885982 6 0.011827604181016334 7 0.014944525753425345 8 0.019397270856866787 9 0.006456480399990093 10-11 0.013928743276702765 12-13 0.023947419759446014 14-15 0.04225933399734895 16-17 0.029054161799955416 18-19 0.011730200381878553 20-21 0.021901939977552597 22-23 0.03922590139562946 24-25 0.03669340261804714 26-27 0.022319384831000235 28-29 0.012022411779291897 30-31 0.011702370724982043 32-33 0.008279322926711434 34-35 0.005231975496543696 36-37 6.400821086197075E-4 38-39 0.003659599881890936 40-41 0.0010575269620673427 42-43 0.24217367431342152 44-45 0.21029480233847042 46-47 0.2168069420522535 48-49 0.22375044144793255 50-51 0.2145527398436363 52-53 0.22220589549017625 54-55 0.21839323249535453 56-57 0.22132926129793626 58-59 0.23037389978930164 60-61 0.23541106768756978 62-63 0.21968731154104218 64-65 0.21931161117293932 66-67 0.2171269831065634 68-69 0.21193675209536444 70-71 0.20343479191348093 72-73 0.21548503334966937 74-75 0.21441359155915377 76-77 0.20833281152726651 78-79 0.22713174476085835 80-81 0.23868105237290962 82-83 0.23794356646515213 84-85 0.23126444880998995 86-87 0.2527628587625432 88-89 0.24435830237979744 90-91 0.25187230974185487 92-93 0.2467655677013455 94-95 0.2508147827797875 96-97 0.25775828217546654 98-99 0.2508147827797875 100-101 0.2586627460246031 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3593289.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.24935142224122 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7059979162511 50.41352672665392 2 11.695208023287298 14.79428644442227 3 3.6372116429042345 6.901538321973518 4 1.616450602047956 4.089578087424983 5 0.8958769006387252 2.83318164597835 6 0.556708122052133 2.1126856590774787 7 0.3615577590928743 1.6007805635012264 8 0.2679885641371036 1.3560082296199598 9 0.1949807553135266 1.1099165682059344 >10 1.0130244067879837 11.197207538848927 >50 0.04216443179598637 1.7844298481636216 >100 0.01181633884167605 1.2492614175273289 >500 7.498750677335968E-4 0.33147368967407803 >1k 2.646617817248551E-4 0.22612525892841967 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 2.782965689650902E-5 6 0.0 0.0 0.0 0.0 5.565931379301804E-5 7 0.0 0.0 0.0 0.0 5.565931379301804E-5 8 0.0 0.0 0.0 2.782965689650902E-5 8.348897068952706E-5 9 0.0 0.0 0.0 2.782965689650902E-5 8.348897068952706E-5 10-11 0.0 0.0 0.0 2.782965689650902E-5 8.348897068952706E-5 12-13 0.0 0.0 0.0 5.565931379301804E-5 1.6697794137905412E-4 14-15 0.0 0.0 0.0 8.348897068952706E-5 2.0872242672381766E-4 16-17 0.0 0.0 0.0 8.348897068952706E-5 2.2263725517207217E-4 18-19 0.0 0.0 0.0 1.1131862758603608E-4 2.5046691206858117E-4 20-21 0.0 0.0 0.0 1.6697794137905412E-4 2.5046691206858117E-4 22-23 0.0 0.0 0.0 2.643817405168357E-4 2.922113974133447E-4 24-25 0.0 0.0 0.0 4.452745103441443E-4 3.3395588275810824E-4 26-27 0.0 0.0 0.0 6.81826593964471E-4 3.3395588275810824E-4 28-29 0.0 0.0 0.0 0.0015167163008597416 3.3395588275810824E-4 30-31 2.782965689650902E-5 0.0 0.0 0.007096562508609801 3.3395588275810824E-4 32-33 2.782965689650902E-5 0.0 0.0 0.024016993901687284 3.3395588275810824E-4 34-35 2.782965689650902E-5 0.0 0.0 0.04770003192061646 4.174448534476353E-4 36-37 2.782965689650902E-5 0.0 0.0 0.08547879115762745 4.174448534476353E-4 38-39 2.782965689650902E-5 1.391482844825451E-5 0.0 0.151880352512698 4.174448534476353E-4 40-41 2.782965689650902E-5 2.782965689650902E-5 0.0 0.22671429990741074 4.4527451034414434E-4 42-43 2.782965689650902E-5 2.782965689650902E-5 0.0 0.3080603870159066 4.4527451034414434E-4 44-45 2.782965689650902E-5 2.782965689650902E-5 0.0 0.4124216003778154 4.4527451034414434E-4 46-47 2.782965689650902E-5 2.782965689650902E-5 0.0 0.5339954565302151 4.4527451034414434E-4 48-49 2.782965689650902E-5 2.782965689650902E-5 0.0 0.6619701337688118 5.009338241371623E-4 50-51 2.782965689650902E-5 2.782965689650902E-5 0.0 0.7951072123617109 5.009338241371623E-4 52-53 2.782965689650902E-5 2.782965689650902E-5 0.0 0.9332814588528782 5.565931379301804E-4 54-55 4.174448534476353E-5 4.174448534476353E-5 0.0 1.0912982507112563 6.122524517231984E-4 56-57 5.565931379301804E-5 5.565931379301804E-5 0.0 1.2749879010566643 6.122524517231984E-4 58-59 5.565931379301804E-5 5.565931379301804E-5 0.0 1.469224991365849 6.122524517231984E-4 60-61 5.565931379301804E-5 5.565931379301804E-5 0.0 1.679450219562078 6.122524517231984E-4 62-63 5.565931379301804E-5 5.565931379301804E-5 0.0 1.902282282332426 6.679117655162165E-4 64-65 5.565931379301804E-5 5.565931379301804E-5 0.0 2.1451795277251566 6.679117655162165E-4 66-67 5.565931379301804E-5 5.565931379301804E-5 0.0 2.419830411636804 6.81826593964471E-4 68-69 5.565931379301804E-5 5.565931379301804E-5 0.0 2.7227979714406496 6.957414224127255E-4 70-71 5.565931379301804E-5 5.565931379301804E-5 0.0 3.038344536161717 7.0965625086098E-4 72-73 5.565931379301804E-5 5.565931379301804E-5 0.0 3.3687521376655205 8.348897068952706E-4 74-75 5.565931379301804E-5 5.565931379301804E-5 0.0 3.7189883697080863 8.348897068952706E-4 76-77 5.565931379301804E-5 5.565931379301804E-5 0.0 4.116535018474718 8.348897068952706E-4 78-79 5.565931379301804E-5 5.565931379301804E-5 0.0 4.561127702224898 8.348897068952706E-4 80-81 5.565931379301804E-5 5.565931379301804E-5 0.0 5.020428359644882 8.766341922400342E-4 82-83 5.565931379301804E-5 5.565931379301804E-5 0.0 5.500865641477766 0.0010575269620673427 84-85 5.565931379301804E-5 5.565931379301804E-5 0.0 6.005946084492509 0.0010575269620673427 86-87 5.565931379301804E-5 5.565931379301804E-5 0.0 6.5456744503434034 0.0010714417905155972 88-89 5.565931379301804E-5 5.565931379301804E-5 0.0 7.139434095058872 0.0010992714474121063 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2650 0.0 43.697533 1 GTATCAA 4875 0.0 41.37397 1 TCAACGC 5635 0.0 35.37517 4 CAACGCA 5810 0.0 34.14152 5 ATCAACG 5880 0.0 34.062164 3 TATCAAC 6195 0.0 32.48477 2 AACGCAG 6355 0.0 31.345016 6 ACGCAGA 7185 0.0 27.397854 7 GTACATG 9030 0.0 27.224188 1 TACATGG 9240 0.0 25.99165 2 CGCAGAG 7465 0.0 25.800476 8 ACATGGG 9705 0.0 24.647457 3 GTATAGC 1240 0.0 21.43282 1 CATGGGG 8595 0.0 21.259743 4 GCAGAGT 8800 0.0 20.378437 9 AGAGTAC 7315 0.0 17.803106 10-11 GTATTAA 1855 0.0 17.652983 1 TAAGGCG 760 0.0 17.48345 5 TAGCCCT 2675 0.0 16.678127 4 CAGAGTA 8100 0.0 16.282743 10-11 >>END_MODULE