##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921682_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3593289 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.462933540831255 33.0 31.0 34.0 29.0 34.0 2 31.610849280422478 34.0 31.0 34.0 29.0 34.0 3 31.683484128329226 34.0 31.0 34.0 29.0 34.0 4 35.159852157730704 37.0 35.0 37.0 33.0 37.0 5 34.91581306151551 37.0 35.0 37.0 32.0 37.0 6 34.88984604355508 37.0 35.0 37.0 32.0 37.0 7 34.78345437842601 37.0 35.0 37.0 32.0 37.0 8 34.73002672481952 37.0 35.0 37.0 32.0 37.0 9 36.32969989332892 39.0 37.0 39.0 32.0 39.0 10-11 36.232215249037864 39.0 37.0 39.0 32.0 39.0 12-13 36.16235376558913 39.0 37.0 39.0 32.0 39.0 14-15 37.417027686890755 40.0 38.0 41.0 32.0 41.0 16-17 37.38502845164973 40.0 38.0 41.0 32.0 41.0 18-19 37.35187289416465 40.0 38.0 41.0 32.0 41.0 20-21 37.29649702542712 40.0 38.0 41.0 31.0 41.0 22-23 37.21127969389604 40.0 38.0 41.0 31.0 41.0 24-25 37.13294018377036 40.0 38.0 41.0 31.0 41.0 26-27 37.0124205150212 40.0 37.0 41.0 31.0 41.0 28-29 36.89684269759543 40.0 37.0 41.0 30.0 41.0 30-31 36.74897412927265 40.0 37.0 41.0 30.0 41.0 32-33 36.700506277118265 40.0 37.0 41.0 30.0 41.0 34-35 36.82985573940755 40.0 37.0 41.0 30.0 41.0 36-37 36.82857460115231 40.0 37.0 41.0 30.0 41.0 38-39 36.73095442643216 40.0 37.0 41.0 30.0 41.0 40-41 36.65862486986157 40.0 37.0 41.0 30.0 41.0 42-43 36.5463578075685 40.0 37.0 41.0 30.0 41.0 44-45 36.427936077504484 40.0 37.0 41.0 30.0 41.0 46-47 36.28176901440435 40.0 36.0 41.0 29.0 41.0 48-49 36.15032773595445 40.0 36.0 41.0 28.5 41.0 50-51 36.00694294280254 40.0 36.0 41.0 28.0 41.0 52-53 35.84383833307034 39.5 35.0 41.0 28.0 41.0 54-55 35.640677245832435 39.0 35.0 41.0 28.0 41.0 56-57 35.422984764097734 39.0 35.0 41.0 27.0 41.0 58-59 35.190808894024386 39.0 35.0 41.0 27.0 41.0 60-61 34.921887997319445 38.0 35.0 40.0 26.0 41.0 62-63 34.62918178860648 38.0 34.5 40.0 26.0 41.0 64-65 34.29616891377231 37.0 34.0 40.0 26.0 41.0 66-67 33.94854602566062 37.0 34.0 39.5 26.0 41.0 68-69 33.58566956345565 36.0 34.0 39.0 25.0 41.0 70-71 33.18323087845147 36.0 33.5 39.0 24.0 40.0 72-73 32.80965780932176 35.0 33.0 38.0 23.5 40.0 74-75 32.39176879455006 35.0 33.0 37.0 22.5 39.0 76-77 29.65886058705548 33.0 29.0 34.5 18.5 36.5 78-79 31.224738672564328 34.5 31.5 36.0 20.0 37.5 80-81 31.389566077206702 35.0 32.0 36.0 20.0 37.0 82-83 31.202821008830625 35.0 32.0 35.0 20.0 37.0 84-85 30.995422021440525 35.0 32.0 35.0 19.5 36.5 86-87 30.782119528932967 35.0 32.0 35.0 18.5 36.0 88-89 30.506141309535636 35.0 32.0 35.0 14.5 36.0 90-91 30.311839097829314 34.5 32.0 35.0 9.0 35.0 92-93 30.150986603081467 34.0 32.0 35.0 7.0 35.0 94-95 30.047190331754557 34.0 31.5 35.0 2.0 35.0 96-97 29.847950304025087 34.0 31.0 35.0 2.0 35.0 98-99 29.649739277859364 34.0 31.0 35.0 2.0 35.0 100-101 28.544072992737295 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 60401.0 3 20558.0 4 11090.0 5 8096.0 6 7010.0 7 7039.0 8 7436.0 9 8086.0 10 9109.0 11 10008.0 12 10583.0 13 11353.0 14 12192.0 15 12877.0 16 13713.0 17 14856.0 18 14222.0 19 13034.0 20 12640.0 21 12685.0 22 13472.0 23 14968.0 24 17804.0 25 21311.0 26 25774.0 27 31400.0 28 37796.0 29 45670.0 30 55503.0 31 69588.0 32 88284.0 33 116512.0 34 164778.0 35 244452.0 36 428768.0 37 850823.0 38 970657.0 39 118736.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.256766800124666 19.798552944318406 14.190389797348644 25.754290458208278 2 14.864810333719703 21.178809919057354 37.98257026648318 25.973809480739767 3 17.38509650068134 25.23490590404261 29.287561565386227 28.09243602988983 4 12.835907131201765 17.609681305869717 36.267324674254795 33.28708688867372 5 14.215736080880918 37.42546299170208 34.49748534591491 13.861315581502101 6 32.81655451099571 36.15253171250299 17.51301061443496 13.517903162066336 7 28.407678870249516 31.875198460240746 21.571546290877244 18.145576378632498 8 26.33865519862165 34.84974350796721 20.228125263512066 18.58347602989907 9 26.441146070755288 15.781265393291822 19.49341076663533 38.28417776931756 10-11 25.18762113964615 25.63539754408641 28.255257749526443 20.921723566741 12-13 25.934091378401558 22.980924381581385 27.846579084612994 23.238405155404063 14-15 23.216229669183853 24.524306806506974 25.16375490401947 27.095708620289706 16-17 23.504385536482037 27.411363238526043 25.861265264218936 23.222985960772984 18-19 23.456072211192243 26.990293991102178 26.95904084282755 22.594592954878024 20-21 24.158083620362536 26.116811805830086 26.72699324056839 22.99811133323899 22-23 23.861843564489245 25.986498720253227 26.424815816373243 23.72684189888428 24-25 23.736989390859772 26.091349396420167 26.427923093439 23.743738119281062 26-27 23.60355456182265 26.3344183037586 26.415070972539546 23.646956161879203 28-29 23.700209039722555 26.515064859089527 26.220082563871777 23.564643537316137 30-31 24.075641058471568 26.1982234850467 26.11016875555996 23.61596670092177 32-33 23.80191675505999 26.188327739341798 26.01562328217515 23.99413222342307 34-35 24.095775067337712 26.286987034837484 26.070434795314924 23.546803102509884 36-37 24.127034752737657 26.13244675181256 26.06889486511331 23.671623630336473 38-39 23.98759186917612 26.21365829467098 26.060943052451393 23.737806783701508 40-41 24.2053994887806 26.022929313043193 26.05707739968582 23.714593798490387 42-43 24.004942411361256 26.007498504724346 25.977272923362012 24.01028616055239 44-45 23.98884511605059 26.019184285195422 26.05170544760781 23.94026515114617 46-47 24.076841415503566 25.978423209723232 25.882755502702143 24.061979872071053 48-49 23.83815114489561 26.03125353555047 26.017657539258266 24.112937780295656 50-51 23.961696463284884 26.044941087216856 26.002040524959273 23.991321924538983 52-53 24.09990589224739 25.93328855457422 25.983368962920878 23.98343659025752 54-55 23.750567746646954 25.848669914325917 26.170476506421103 24.230285832606025 56-57 23.823602674626535 25.908085805136338 26.0620368630889 24.206274657148224 58-59 23.86753576310892 25.86684075686931 26.138608515120698 24.127014964901072 60-61 23.920432169461193 25.877273669752732 26.176783694007987 24.025510466778087 62-63 23.87089474154481 25.878114112037746 26.154936442205372 24.09605470421207 64-65 23.711916686456956 25.73976934870786 26.099864442321724 24.44844952251346 66-67 23.730292492925244 25.896863437166058 25.95323872476844 24.419605345140262 68-69 23.784860740806536 25.850655605583317 25.981591560290195 24.382892093319956 70-71 23.722432186234535 25.64201784157243 26.016625139556986 24.618924832636047 72-73 23.694873981664923 25.81907707143765 25.882202119025028 24.603846827872403 74-75 23.705733751818112 25.880940616453135 25.802913155129335 24.610412476599418 76-77 23.657990022400714 25.624597185356873 26.005999279483937 24.711413512758476 78-79 23.56652911800945 25.737819325714007 26.019132767995305 24.67651878828124 80-81 23.669870476093404 25.822949044684435 25.837471941081873 24.669708538140288 82-83 23.639772952976728 25.88299041657347 25.844101633621175 24.63313499682863 84-85 23.612423265095757 25.81851260628447 25.88308311218144 24.68598101643833 86-87 23.465658327707935 25.95233559908835 25.833283206009934 24.748722867193784 88-89 23.425380531003093 25.76835401099341 25.85421126186992 24.952054196133577 90-91 23.342920617676423 25.801271896928508 25.919010150109294 24.936797335285775 92-93 23.396586088737635 25.663365917579846 25.979977757395222 24.9600702362873 94-95 23.268331879537776 25.703805901315206 25.951851070474106 25.07601114867291 96-97 23.16898052661259 25.644752216857636 26.009380693840672 25.1768865626891 98-99 23.024905614589148 25.598957043297343 25.91709557319482 25.459041768918688 100-101 23.008761635264058 25.632312436635175 25.941111168935116 25.41781475916565 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 37.0 2 45.5 3 56.5 4 56.5 5 65.5 6 108.0 7 260.5 8 399.5 9 409.5 10 337.5 11 281.5 12 294.0 13 309.5 14 350.0 15 407.0 16 447.5 17 467.5 18 512.0 19 610.0 20 712.0 21 842.5 22 988.5 23 1202.5 24 1511.5 25 1909.0 26 2469.0 27 3299.5 28 4536.0 29 6509.5 30 9920.0 31 14848.5 32 21962.0 33 29948.5 34 38358.0 35 48020.0 36 60120.5 37 72816.0 38 84661.0 39 95811.5 40 105773.5 41 115798.5 42 125577.5 43 135354.0 44 144511.5 45 154051.5 46 160699.5 47 164904.5 48 169066.0 49 169262.0 50 166138.5 51 161929.0 52 157612.5 53 154128.5 54 148855.5 55 138996.0 56 126319.5 57 111770.0 58 98939.0 59 85878.5 60 69666.0 61 56295.5 62 45358.0 63 33739.5 64 23831.5 65 17075.5 66 12616.0 67 9714.5 68 7194.5 69 5009.5 70 3546.5 71 2527.5 72 1711.0 73 1185.5 74 856.0 75 572.5 76 341.5 77 204.0 78 128.0 79 68.5 80 45.5 81 33.5 82 20.0 83 13.0 84 10.5 85 9.5 86 8.5 87 6.0 88 3.5 89 3.5 90 3.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1709575823152549 2 1.1131862758603608E-4 3 0.010046506139639757 4 0.0061225245172319845 5 0.02632685542409753 6 0.0019202463258591225 7 0.0 8 0.0 9 8.348897068952706E-5 10-11 0.05220843633785092 12-13 3.061262258615992E-4 14-15 0.0053015496387849685 16-17 0.0 18-19 0.00141931250172196 20-21 3.757003681028718E-4 22-23 0.0 24-25 5.426783094819259E-4 26-27 0.002880369488788684 28-29 0.005343294124129732 30-31 0.017727491443076244 32-33 0.012412026975843022 34-35 0.010895310674983281 36-37 0.004508404417234461 38-39 0.0 40-41 0.003214325371546792 42-43 0.00851587501033176 44-45 0.006790436282748201 46-47 0.0034091329698223553 48-49 0.008891575378434631 50-51 0.002671647062064866 52-53 0.001878501840514359 54-55 0.0038126629948217355 56-57 0.007347029420678382 58-59 0.0143461881301504 60-61 0.007068732851713291 62-63 0.020371308848244604 64-65 0.04063129906890317 66-67 0.06057124823525188 68-69 0.05116482420423183 70-71 0.0685166152792052 72-73 0.03374345898701719 74-75 0.026827789248234694 76-77 0.23261418716947063 78-79 0.0880947789058993 80-81 0.06699989897834546 82-83 0.02764876412668171 84-85 0.05193013976888583 86-87 0.06770955522920645 88-89 0.29493870378920256 90-91 0.2996140861478161 92-93 0.05518620962577739 94-95 0.010992714474121063 96-97 0.01644732722583683 98-99 0.0011966752465498878 100-101 2.782965689650902E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3593289.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.00429098949197 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77534798759915 48.84409599421588 2 12.116027115184076 15.02491341772897 3 3.872567527029363 7.203474114671579 4 1.7269457344222277 4.283121833607109 5 0.9376969218957306 2.90706164025869 6 0.5598016079465375 2.082606107730157 7 0.3959310797302092 1.718459811556295 8 0.2790703835322516 1.3842849013666285 9 0.20981182780516655 1.1708310261841854 >10 1.0662810304390786 11.59410677188514 >50 0.04726256623651987 1.9507379519604784 >100 0.01204172740703597 1.2271836673238563 >500 9.895850839564634E-4 0.4066396514878883 >1k 2.249056887459612E-4 0.20248311002325592 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.782965689650902E-5 0.0 3 0.0 0.0 0.0 2.782965689650902E-5 0.0 4 0.0 0.0 0.0 2.782965689650902E-5 0.0 5 0.0 0.0 0.0 2.782965689650902E-5 0.0 6 0.0 0.0 0.0 2.782965689650902E-5 0.0 7 0.0 0.0 0.0 2.782965689650902E-5 0.0 8 0.0 0.0 0.0 2.782965689650902E-5 0.0 9 0.0 0.0 0.0 8.348897068952706E-5 0.0 10-11 0.0 0.0 0.0 8.348897068952706E-5 0.0 12-13 0.0 0.0 0.0 8.348897068952706E-5 6.957414224127255E-5 14-15 0.0 0.0 0.0 8.348897068952706E-5 1.2523345603429058E-4 16-17 0.0 0.0 0.0 9.740379913778157E-5 1.6697794137905412E-4 18-19 0.0 0.0 0.0 1.1131862758603608E-4 1.9480759827556314E-4 20-21 0.0 0.0 0.0 1.391482844825451E-4 1.9480759827556314E-4 22-23 0.0 0.0 0.0 1.9480759827556312E-4 2.782965689650902E-4 24-25 0.0 0.0 0.0 3.896151965511263E-4 3.061262258615992E-4 26-27 0.0 0.0 0.0 6.122524517231984E-4 3.4787071120636275E-4 28-29 0.0 0.0 0.0 0.001474971815514978 3.6178553965461726E-4 30-31 0.0 0.0 0.0 0.007152221822402818 3.6178553965461726E-4 32-33 0.0 0.0 0.0 0.024490098068927938 3.896151965511263E-4 34-35 0.0 0.0 0.0 0.04893845165251111 4.174448534476353E-4 36-37 0.0 0.0 0.0 0.0874546967972796 4.4527451034414434E-4 38-39 0.0 0.0 0.0 0.15530340031096856 5.009338241371623E-4 40-41 0.0 0.0 0.0 0.23134793778067947 5.009338241371623E-4 42-43 0.0 0.0 0.0 0.31389070013572523 5.009338241371623E-4 44-45 0.0 0.0 0.0 0.419671225999356 5.009338241371623E-4 46-47 0.0 0.0 0.0 0.542845287423305 5.009338241371623E-4 48-49 0.0 0.0 0.0 0.6723645106196579 5.009338241371623E-4 50-51 0.0 0.0 0.0 0.8071713686263475 5.287634810336714E-4 52-53 0.0 0.0 0.0 0.9457908896278591 5.705079663784349E-4 54-55 0.0 0.0 0.0 1.1049069529336495 6.122524517231984E-4 56-57 0.0 0.0 0.0 1.289194940902332 6.400821086197075E-4 58-59 0.0 0.0 0.0 1.484475643345136 6.679117655162165E-4 60-61 0.0 0.0 0.0 1.6956470798758463 6.679117655162165E-4 62-63 0.0 0.0 0.0 1.9190913950979172 6.679117655162165E-4 64-65 0.0 0.0 0.0 2.1630044229673704 7.0965625086098E-4 66-67 0.0 0.0 0.0 2.439561638376429 7.37485907757489E-4 68-69 0.0 0.0 0.0 2.7442546369078578 7.514007362057436E-4 70-71 0.0 0.0 0.0 3.062166722465129 7.792303931022526E-4 72-73 0.0 0.0 0.0 3.3958721383111685 8.905490206882887E-4 74-75 0.0 5.565931379301804E-5 0.0 3.7500462668045906 9.183786775847977E-4 76-77 0.0 5.565931379301804E-5 0.0 4.150139329177252 9.601231629295612E-4 78-79 0.0 5.565931379301804E-5 0.0 4.597640212073117 0.0010018676482743247 80-81 0.0 5.565931379301804E-5 0.0 5.061755400136198 0.0010296973051708337 82-83 0.0 5.565931379301804E-5 0.0 5.546645427072523 0.0011131862758603608 84-85 0.0 5.565931379301804E-5 0.0 6.057778820462256 0.0011131862758603608 86-87 0.0 6.957414224127255E-5 0.0 6.605633446126932 0.0011131862758603608 88-89 0.0 8.348897068952706E-5 0.0 7.206044378840666 0.0011131862758603608 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4640 0.0 43.84545 1 GGTATCA 2575 0.0 41.16484 1 TCAACGC 5820 0.0 33.9209 4 CAACGCA 5895 0.0 33.277008 5 ATCAACG 6110 0.0 32.310905 3 TATCAAC 6240 0.0 31.86592 2 AACGCAG 6435 0.0 30.699978 6 ACGCAGA 7735 0.0 24.741495 7 GTACATG 9235 0.0 23.161913 1 CGCAGAG 8065 0.0 23.02256 8 TACATGG 9390 0.0 22.035244 2 GTATTAA 1900 0.0 20.01406 1 ACATGGG 9815 0.0 19.969019 3 GCAGAGT 9070 0.0 19.529396 9 TAAGGCG 725 0.0 18.999317 5 CATGGGG 8045 0.0 18.404564 4 AGAGTAC 7845 0.0 18.190254 10-11 ATGGGGG 4505 0.0 16.974972 5 GTATATA 1190 0.0 16.776491 1 TAAGGTG 2060 0.0 16.370771 5 >>END_MODULE