##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921681_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2769528 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28137754880976 33.0 31.0 34.0 28.0 34.0 2 31.417666837092817 34.0 31.0 34.0 28.0 34.0 3 31.488812534121337 34.0 31.0 34.0 28.0 34.0 4 34.96937239847367 37.0 35.0 37.0 32.0 37.0 5 34.700343163167155 37.0 35.0 37.0 32.0 37.0 6 34.673874754109725 37.0 35.0 37.0 32.0 37.0 7 34.5550057627148 37.0 35.0 37.0 32.0 37.0 8 34.49569782287812 37.0 35.0 37.0 31.0 37.0 9 36.07331213116459 39.0 37.0 39.0 31.0 39.0 10-11 35.96689580318379 39.0 37.0 39.0 31.0 39.0 12-13 35.88750285247161 39.0 37.0 39.0 30.0 39.0 14-15 37.11381253412134 40.0 38.0 41.0 31.0 41.0 16-17 37.07855454070152 40.0 38.0 41.0 31.0 41.0 18-19 37.03698409981773 40.0 38.0 41.0 31.0 41.0 20-21 36.98208340915853 40.0 37.5 41.0 30.5 41.0 22-23 36.88787259056417 40.0 37.0 41.0 30.0 41.0 24-25 36.80265265417067 40.0 37.0 41.0 30.0 41.0 26-27 36.67223927687317 40.0 37.0 41.0 30.0 41.0 28-29 36.55138763717139 40.0 37.0 41.0 30.0 41.0 30-31 36.393793996666574 40.0 37.0 41.0 29.5 41.0 32-33 36.34294291301623 40.0 36.5 41.0 29.5 41.0 34-35 36.4739433939646 40.0 37.0 41.0 30.0 41.0 36-37 36.47054859167338 40.0 37.0 41.0 30.0 41.0 38-39 36.36655957260587 40.0 37.0 41.0 29.5 41.0 40-41 36.279459532454624 40.0 36.5 41.0 29.0 41.0 42-43 36.159671431377475 40.0 36.0 41.0 28.5 41.0 44-45 36.02897569549757 40.0 36.0 41.0 28.0 41.0 46-47 35.87148080828213 40.0 36.0 41.0 27.5 41.0 48-49 35.725814109841096 40.0 35.0 41.0 27.0 41.0 50-51 35.56601955279022 39.5 35.0 41.0 27.0 41.0 52-53 35.38812191102599 39.0 35.0 41.0 26.0 41.0 54-55 35.173889197003966 39.0 35.0 41.0 26.0 41.0 56-57 34.94597382658706 39.0 35.0 41.0 26.0 41.0 58-59 34.6967122195551 38.5 35.0 40.0 25.5 41.0 60-61 34.41305341560006 38.0 34.0 40.0 25.0 41.0 62-63 34.10602113428715 37.0 34.0 40.0 24.0 41.0 64-65 33.76677885184768 37.0 34.0 40.0 23.0 41.0 66-67 33.40857647945787 36.0 34.0 39.0 22.5 41.0 68-69 33.04336244298668 36.0 33.0 39.0 22.0 40.5 70-71 32.64484345346933 35.0 33.0 38.5 21.0 40.0 72-73 32.27938767905578 35.0 33.0 37.5 20.0 39.5 74-75 31.881349637916642 35.0 32.5 37.0 19.0 39.0 76-77 29.18109963141734 33.0 28.5 34.5 11.5 36.5 78-79 30.75147028663368 34.5 31.5 36.0 13.0 37.0 80-81 30.933430353475394 35.0 32.0 35.5 15.0 37.0 82-83 30.764625596852603 35.0 32.0 35.0 12.5 37.0 84-85 30.572915854253864 35.0 32.0 35.0 9.5 36.0 86-87 30.365573664537784 35.0 32.0 35.0 7.0 36.0 88-89 30.10046007839603 35.0 31.0 35.0 2.0 36.0 90-91 29.906892257453258 34.0 31.0 35.0 2.0 35.0 92-93 29.754671915214434 34.0 31.0 35.0 2.0 35.0 94-95 29.64812469850458 34.0 31.0 35.0 2.0 35.0 96-97 29.446171694238153 34.0 31.0 35.0 2.0 35.0 98-99 29.241902771880262 34.0 31.0 35.0 2.0 35.0 100-101 28.11387662446453 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57440.0 3 18631.0 4 10211.0 5 6994.0 6 6393.0 7 6174.0 8 6412.0 9 7034.0 10 7875.0 11 8396.0 12 8817.0 13 9426.0 14 10098.0 15 10975.0 16 11434.0 17 12073.0 18 11512.0 19 10720.0 20 10233.0 21 10255.0 22 10779.0 23 12094.0 24 14345.0 25 17327.0 26 20800.0 27 24923.0 28 30509.0 29 36418.0 30 44277.0 31 55697.0 32 69631.0 33 92826.0 34 132063.0 35 197280.0 36 344993.0 37 665765.0 38 679870.0 39 78826.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.225393410658555 19.124628055173883 13.29550620845403 26.354472325713534 2 15.121495738793818 20.803380801228805 37.792022519417614 26.283100940559756 3 17.898551666659447 24.683091318522113 28.98392778988694 28.434429224931495 4 13.18372246026341 16.645747287642422 35.0463030835261 35.12422716856807 5 14.257089394431343 37.24851642523401 34.200177042991974 14.294217137342672 6 33.97951015158501 35.19566386191721 16.825680301891808 13.999145684605965 7 29.092719048155498 31.700383603271025 20.88590546836862 18.320991880204858 8 26.61959005288988 35.220261358614174 19.637642226401034 18.522506362094912 9 26.953654196671778 15.50513300461306 18.985581658679745 38.55563114003541 10-11 25.78422456294993 25.167653643747183 27.703713604749776 21.344408188553114 12-13 26.269757291482932 22.560678934636762 27.55996491083007 23.609598863050234 14-15 23.435470839671225 24.109699346877242 24.697464692102493 27.757365121349036 16-17 23.80022877544477 27.21985479114131 25.46134214927598 23.518574284137948 18-19 23.777688792184257 26.61646362665721 26.70165991030108 22.904187670857453 20-21 24.33552589057819 25.790524787499354 26.522907751918112 23.351041570004345 22-23 24.172927661319907 25.517416686164573 26.273827164773206 24.035828487742318 24-25 23.995632450646166 25.770292395802663 26.24394907919848 23.990126074352688 26-27 23.751080086934135 25.980003993568406 26.323700023073147 23.945215896424312 28-29 23.903242585568353 26.206141122948303 26.049048171260026 23.84156812022332 30-31 24.227865092823034 25.86806097882693 25.93367892600358 23.970395002346464 32-33 23.99963671903847 25.960180289913374 25.83852089037058 24.201662100677577 34-35 24.20590734913174 25.961223011827588 25.96564659940767 23.867223039632997 36-37 24.2793261554216 25.842125179911186 26.027434605488075 23.851114059179135 38-39 24.170616798241433 25.894556762018656 25.957076440462057 23.977749999277854 40-41 24.332887393999137 25.71956012688509 25.985083600084497 23.96246887903128 42-43 24.20547617985801 25.744899088555183 25.78362750378302 24.265997227803787 44-45 24.083910291212142 25.762632484255715 25.97197850678059 24.18147871775155 46-47 24.209314971940117 25.772739122867705 25.795198585703794 24.222747319488384 48-49 23.955941576819225 25.86463436762838 25.887311762725112 24.29211229282728 50-51 24.105869396450558 25.882702341620178 25.896134611565476 24.11529365036379 52-53 24.31192221623432 25.691029609429233 25.818075463829302 24.178972710507146 54-55 23.74796527205053 25.62661315831664 26.137967193035923 24.487454376596908 56-57 23.880645790302314 25.74738563979605 25.92455909754019 24.447409472361446 58-59 23.983703064107793 25.68470116476073 25.923099104603846 24.408496666527633 60-61 23.949599252380725 25.72028408376918 26.025918238530416 24.304198425319683 62-63 23.93515995488521 25.653490852265687 26.06137301065355 24.34997618219555 64-65 23.709774307355374 25.514961470677584 26.025543172599736 24.74972104936731 66-67 23.710219091367765 25.6702687831246 25.87219348063949 24.747318644868145 68-69 23.777666512050658 25.625201398191138 25.910301761322007 24.686830328436198 70-71 23.73272838494027 25.442700024822777 25.895544148237164 24.929027441999786 72-73 23.689033431132923 25.679597570890856 25.747430006714616 24.88393899126161 74-75 23.63094114810805 25.686238215671388 25.801578136159613 24.88124250006095 76-77 23.60698948674384 25.348516151891644 25.97697351336963 25.067520847994896 78-79 23.512458614783522 25.46199751620942 25.969452592142467 25.05609127686459 80-81 23.686411214031413 25.55662685166668 25.772873301078832 24.984088633223077 82-83 23.50821312796646 25.55948610365944 25.870779734744886 25.06152103362921 84-85 23.535410752591837 25.531155870025586 25.87514459303338 25.058288784349198 86-87 23.433374186489843 25.600693154735666 25.796239100806613 25.169693557967882 88-89 23.28642107247357 25.41254728995276 25.87943060660608 25.421601030967594 90-91 23.22036501024219 25.37716469500871 25.924024529105495 25.47844576564361 92-93 23.239225966061234 25.304023346449693 26.00475281462289 25.451997872866183 94-95 23.10706884242844 25.251052907353184 26.033217814148806 25.608660436069574 96-97 23.02021330092801 25.12776297649862 26.108102203158616 25.74392151941475 98-99 22.876542449833426 25.104436777994284 26.011297713286357 26.007723058885933 100-101 22.795491715452133 25.0957430041666 26.079287646412823 26.029477633968444 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 38.5 2 61.0 3 90.0 4 90.0 5 107.0 6 167.5 7 354.0 8 535.5 9 523.0 10 430.0 11 375.0 12 381.5 13 396.0 14 424.5 15 447.0 16 480.5 17 548.0 18 601.0 19 655.5 20 711.5 21 826.0 22 991.5 23 1199.5 24 1410.0 25 1713.5 26 2234.0 27 3006.0 28 4077.0 29 5868.5 30 8705.5 31 12717.0 32 18186.0 33 23276.5 34 28044.5 35 34197.5 36 42306.0 37 50735.0 38 58935.0 39 66591.0 40 73669.0 41 80923.5 42 88223.0 43 95641.0 44 102289.0 45 109652.5 46 115874.0 47 121590.0 48 126211.5 49 128027.0 50 127837.5 51 126482.5 52 125191.5 53 123639.0 54 121245.0 55 114921.0 56 105382.5 57 94338.0 58 84411.0 59 73921.5 60 60830.5 61 49659.5 62 40332.0 63 30323.5 64 21250.0 65 15127.5 66 11044.5 67 8362.0 68 6284.0 69 4505.5 70 3275.5 71 2329.5 72 1505.5 73 931.0 74 661.0 75 448.5 76 287.5 77 165.5 78 89.5 79 59.5 80 34.0 81 22.5 82 21.5 83 14.0 84 8.5 85 6.5 86 4.5 87 2.5 88 3.0 89 2.0 90 1.5 91 2.5 92 2.5 93 1.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1685846830218001 2 2.5275064920809607E-4 3 0.009965597025919218 4 0.005993801109791993 5 0.02560003004122002 6 0.0021303269004682387 7 0.0 8 0.0 9 0.0 10-11 0.05038764728141402 12-13 4.513404450144573E-4 14-15 0.005073066601962501 16-17 0.0 18-19 0.0014803966596474202 20-21 2.5275064920809607E-4 22-23 0.0 24-25 4.1523320941330076E-4 26-27 0.0027080426700867443 28-29 0.005361924486771753 30-31 0.01691623987914186 32-33 0.011608476245771843 34-35 0.010200294057326736 36-37 0.0038273669737225982 38-39 0.0 40-41 0.0033579729109075624 42-43 0.008792111868881628 44-45 0.006842321146419173 46-47 0.003394080146508719 48-49 0.009044862518089725 50-51 0.0028163643768902135 52-53 0.0020039515758641904 54-55 0.004188439329734164 56-57 0.0075103050050405705 58-59 0.01511087809908403 60-61 0.0073658760626359445 62-63 0.021339376240283543 64-65 0.04033178216649191 66-67 0.06010049365812514 68-69 0.049827985129596096 70-71 0.06892871276260792 72-73 0.03397690870068835 74-75 0.0272790164966738 76-77 0.23442622714050912 78-79 0.0861699177621602 80-81 0.06688865395114259 82-83 0.027423445439078428 84-85 0.05105563114003542 86-87 0.06831488975738825 88-89 0.29746946050012857 90-91 0.3033007790497153 92-93 0.053583137632116376 94-95 0.010507205559936568 96-97 0.015724701104303695 98-99 0.0010651634502341193 100-101 1.6248256020520463E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2769528.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.7929964305757 #Duplication Level Percentage of deduplicated Percentage of total 1 78.6133884329205 47.005300539650754 2 11.771915973264463 14.07756259540878 3 3.8010693227148438 6.818319733363781 4 1.7921725500329628 4.286374675483867 5 1.0088767034387527 3.0161880563802153 6 0.6454285957632633 2.315526583359857 7 0.44377726718356064 1.8574340786874095 8 0.31989739985488386 1.5302099270138811 9 0.24606655717150983 1.3241751097176122 >10 1.2867426311810424 13.449409834660553 >50 0.055125191482693056 2.190846231353512 >100 0.01432632812662267 1.5030666631913179 >500 9.097851487410643E-4 0.387210517113774 >1k 3.032617162365824E-4 0.23837545461463877 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 3.6107235601156584E-5 3 0.0 0.0 0.0 0.0 3.6107235601156584E-5 4 0.0 0.0 0.0 0.0 3.6107235601156584E-5 5 0.0 0.0 0.0 0.0 3.6107235601156584E-5 6 0.0 0.0 0.0 0.0 3.6107235601156584E-5 7 0.0 0.0 0.0 0.0 3.6107235601156584E-5 8 0.0 0.0 0.0 0.0 3.6107235601156584E-5 9 0.0 0.0 0.0 3.6107235601156584E-5 3.6107235601156584E-5 10-11 0.0 0.0 0.0 3.6107235601156584E-5 3.6107235601156584E-5 12-13 0.0 1.8053617800578292E-5 0.0 3.6107235601156584E-5 1.0832170680346976E-4 14-15 0.0 5.4160853401734876E-5 0.0 3.6107235601156584E-5 1.8053617800578293E-4 16-17 0.0 7.221447120231317E-5 0.0 3.6107235601156584E-5 2.3469703140751783E-4 18-19 1.8053617800578292E-5 7.221447120231317E-5 0.0 5.4160853401734876E-5 2.527506492080961E-4 20-21 3.6107235601156584E-5 7.221447120231317E-5 0.0 7.221447120231317E-5 2.527506492080961E-4 22-23 3.6107235601156584E-5 7.221447120231317E-5 0.0 1.2637532460404804E-4 3.2496512041040927E-4 24-25 5.4160853401734876E-5 7.221447120231317E-5 0.0 2.8885788480925267E-4 4.1523320941330076E-4 26-27 7.221447120231317E-5 7.221447120231317E-5 0.0 6.318766230202403E-4 4.6939406281503566E-4 28-29 7.221447120231317E-5 7.221447120231317E-5 0.0 0.0033399192931069842 4.6939406281503566E-4 30-31 7.221447120231317E-5 7.221447120231317E-5 0.0 0.013413838025829673 4.8744768061561395E-4 32-33 7.221447120231317E-5 7.221447120231317E-5 0.0 0.039230511480656635 5.596621518179271E-4 34-35 1.0832170680346975E-4 7.221447120231317E-5 0.0 0.0756807658200242 5.777157696185053E-4 36-37 1.4442894240462633E-4 1.0832170680346975E-4 0.0 0.13509522200172738 5.777157696185053E-4 38-39 1.4442894240462633E-4 1.4442894240462633E-4 0.0 0.23191677426622875 6.138230052196619E-4 40-41 1.4442894240462633E-4 1.4442894240462633E-4 0.0 0.3340280365462996 6.499302408208185E-4 42-43 1.4442894240462633E-4 2.1664341360693953E-4 0.0 0.4471339520669226 6.499302408208185E-4 44-45 1.4442894240462633E-4 2.1664341360693953E-4 0.0 0.5889631735082657 6.679838586213969E-4 46-47 1.4442894240462633E-4 2.1664341360693953E-4 0.0 0.7506333209124443 7.401983298237101E-4 48-49 1.4442894240462633E-4 2.1664341360693953E-4 0.0 0.9142352054212848 8.124128010260233E-4 50-51 1.4442894240462633E-4 2.1664341360693953E-4 0.0 1.088849796788478 8.304664188266015E-4 52-53 1.6248256020520463E-4 2.1664341360693953E-4 0.0 1.2679055781346136 8.665736544277581E-4 54-55 1.8053617800578293E-4 2.1664341360693953E-4 0.0 1.4695825425848736 9.20734507829493E-4 56-57 1.8053617800578293E-4 2.1664341360693953E-4 0.0 1.7105983402225937 9.387881256300713E-4 58-59 1.8053617800578293E-4 2.1664341360693953E-4 0.0 1.9613450378548256 9.568417434306496E-4 60-61 1.8053617800578293E-4 2.1664341360693953E-4 0.0 2.226751273141127 0.0010290562146329629 62-63 1.8053617800578293E-4 2.1664341360693953E-4 0.0 2.4997039206680705 0.0010832170680346977 64-65 1.8053617800578293E-4 2.1664341360693953E-4 0.0 2.7959457351577597 0.0011012706858352758 66-67 2.1664341360693953E-4 2.527506492080961E-4 0.0 3.1398129934053745 0.0011373779214364325 68-69 2.1664341360693953E-4 2.527506492080961E-4 0.0 3.515183814714998 0.0011554315392370107 70-71 2.3469703140751783E-4 2.527506492080961E-4 0.0 3.898137155500865 0.001173485157037589 72-73 2.527506492080961E-4 2.527506492080961E-4 0.0 4.297735931898865 0.001354021335043372 74-75 2.527506492080961E-4 2.527506492080961E-4 0.0 4.724902582678348 0.0013720749528439503 76-77 2.527506492080961E-4 2.8885788480925267E-4 0.0 5.206446730273173 0.0013720749528439503 78-79 2.527506492080961E-4 2.8885788480925267E-4 0.0 5.7413393184687065 0.0014442894240462635 80-81 2.527506492080961E-4 2.8885788480925267E-4 0.0 6.285619787920541 0.0014984502774479983 82-83 2.527506492080961E-4 2.8885788480925267E-4 0.0 6.848188572204361 0.0016248256020520463 84-85 2.527506492080961E-4 2.8885788480925267E-4 0.0 7.44847136407359 0.0016248256020520463 86-87 2.527506492080961E-4 2.8885788480925267E-4 0.0 8.094357594507079 0.0016248256020520463 88-89 2.527506492080961E-4 2.8885788480925267E-4 0.0 8.78685826610166 0.0016248256020520463 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1995 0.0 47.18214 1 GTATCAA 3600 0.0 45.690815 1 TCAACGC 4645 0.0 34.229465 4 TATCAAC 4855 0.0 32.945004 2 CAACGCA 4875 0.0 32.544216 5 ATCAACG 4985 0.0 31.990644 3 AACGCAG 5220 0.0 30.297379 6 GTACATG 7395 0.0 27.835886 1 TACATGG 7710 0.0 25.731836 2 ACGCAGA 6390 0.0 24.526112 7 ACATGGG 8235 0.0 23.9761 3 CGCAGAG 6625 0.0 23.010962 8 CATGGGG 7170 0.0 21.18224 4 GTATAGC 720 0.0 19.808159 1 GCAGAGT 7805 0.0 18.43679 9 ATGGGGG 4045 0.0 18.319263 5 AGAGTAC 6315 0.0 17.560186 10-11 TATACCG 280 7.1397335E-7 16.964613 5 TAAGGTG 1610 0.0 16.817095 5 GTATAGG 655 0.0 16.693289 1 >>END_MODULE