##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921680_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2750366 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.2007198314697 31.0 31.0 34.0 26.0 34.0 2 30.25953600357189 31.0 31.0 34.0 26.0 34.0 3 30.31648333349089 31.0 31.0 34.0 26.0 34.0 4 33.771517681646735 37.0 35.0 37.0 28.0 37.0 5 33.76903219426069 37.0 35.0 37.0 28.0 37.0 6 33.810149630994566 37.0 35.0 37.0 29.0 37.0 7 33.722133345162064 37.0 35.0 37.0 28.0 37.0 8 33.69675744973578 37.0 35.0 37.0 28.0 37.0 9 35.22929966411743 39.0 35.0 39.0 29.0 39.0 10-11 35.12594069298413 39.0 35.0 39.0 28.0 39.0 12-13 35.020859405620925 39.0 35.0 39.0 27.0 39.0 14-15 36.13005214578714 40.0 36.0 41.0 27.0 41.0 16-17 36.07167955101248 40.0 36.0 41.0 27.0 41.0 18-19 36.04972756353155 40.0 36.0 41.0 27.0 41.0 20-21 35.979623075619756 40.0 36.0 41.0 27.0 41.0 22-23 35.87266676507781 40.0 36.0 41.0 27.0 41.0 24-25 35.75674692022807 40.0 36.0 41.0 27.0 41.0 26-27 35.6076165863016 40.0 36.0 41.0 26.0 41.0 28-29 35.464611073580755 40.0 36.0 41.0 25.0 41.0 30-31 35.30379774909957 39.5 35.0 41.0 25.0 41.0 32-33 35.11171931299326 39.0 35.0 41.0 24.0 41.0 34-35 34.928760572229294 39.0 35.0 41.0 24.0 41.0 36-37 34.87845981225772 39.0 35.0 41.0 23.5 41.0 38-39 35.03581741484588 39.5 35.0 41.0 24.0 41.0 40-41 35.08424478778461 40.0 35.0 41.0 23.5 41.0 42-43 34.90869669709413 40.0 35.0 41.0 22.5 41.0 44-45 34.76898092835644 40.0 35.0 41.0 21.0 41.0 46-47 34.59297235349768 39.0 35.0 41.0 19.0 41.0 48-49 34.413393890122265 39.0 35.0 41.0 17.0 41.0 50-51 32.72328719159559 37.0 32.0 39.5 13.5 40.0 52-53 32.838496949133315 37.5 32.5 39.5 13.0 40.0 54-55 33.745182459352684 38.5 34.0 40.5 13.0 41.0 56-57 33.7674720382669 38.5 34.0 41.0 10.5 41.0 58-59 33.58004298337022 38.0 34.0 41.0 8.0 41.0 60-61 33.329838646929176 38.0 33.0 40.0 7.0 41.0 62-63 33.04110852882853 37.0 33.0 40.0 3.5 41.0 64-65 32.748416937963896 37.0 33.0 40.0 2.0 41.0 66-67 32.40557220384487 36.0 32.5 39.5 2.0 41.0 68-69 32.039724531207845 36.0 32.0 39.0 2.0 41.0 70-71 31.62334685638202 35.0 32.0 39.0 2.0 40.5 72-73 31.25856940494465 35.0 32.0 37.5 2.0 40.0 74-75 30.849381682292467 35.0 31.0 37.0 2.0 39.0 76-77 30.466655346961097 35.0 31.0 36.5 2.0 39.0 78-79 30.104954395160497 35.0 31.0 36.0 2.0 38.5 80-81 29.768924390426584 35.0 31.0 36.0 2.0 37.0 82-83 29.44435922346335 35.0 30.0 35.0 2.0 37.0 84-85 29.162272766606335 35.0 30.0 35.0 2.0 36.5 86-87 28.90630683334509 35.0 30.0 35.0 2.0 36.0 88-89 28.6585305373903 34.0 30.0 35.0 2.0 36.0 90-91 28.409262076392743 34.0 29.0 35.0 2.0 35.5 92-93 28.193704583317274 34.0 29.0 35.0 2.0 35.0 94-95 27.940737160072516 34.0 29.0 35.0 2.0 35.0 96-97 27.68168109262549 34.0 29.0 35.0 2.0 35.0 98-99 27.38377255972478 34.0 29.0 35.0 2.0 35.0 100-101 26.287481738794035 33.0 25.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 102099.0 3 17025.0 4 11586.0 5 8789.0 6 8154.0 7 8423.0 8 8722.0 9 9830.0 10 10686.0 11 11487.0 12 11502.0 13 11929.0 14 12959.0 15 13703.0 16 14384.0 17 15294.0 18 14298.0 19 13062.0 20 13211.0 21 13702.0 22 14849.0 23 17031.0 24 19796.0 25 23246.0 26 26883.0 27 31632.0 28 37105.0 29 43047.0 30 51341.0 31 61733.0 32 75943.0 33 97506.0 34 132354.0 35 192002.0 36 314559.0 37 561652.0 38 608345.0 39 110481.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.846742637118616 18.492950347571366 12.85337392334367 24.80693309196635 2 16.264519683308794 20.24535635765816 38.32086562456562 25.169258334467422 3 18.862077936727122 23.909098682618605 29.888420106576717 27.340403274077552 4 13.234044132522737 16.113057387416365 36.891816955260545 33.761081524800346 5 14.050525275554538 37.06451867599924 34.68936281071633 14.195593237729895 6 32.89556074817332 35.656811601791674 17.324216434707925 14.123411215327094 7 28.362359911140235 31.99344279225339 21.54663846737633 18.09755882923005 8 26.493028925441013 33.89648866143513 20.630336856781593 18.98014555634226 9 26.71012318457469 15.145506733736166 19.80541651425251 38.338953567436626 10-11 25.206432531312377 25.28332370602735 28.438752788418725 21.07149097424155 12-13 25.842836582303452 23.032384235835135 27.894192767075165 23.23058641478625 14-15 23.10850689487225 24.6642953248143 25.307842196523595 26.919355583789855 16-17 23.07284694028594 27.535098907581396 26.29845864124321 23.093595510889454 18-19 23.04135618242792 26.864728111713422 27.576127538455804 22.51778816740286 20-21 23.673211035765373 26.187531786766776 27.454838470947646 22.684418706520205 22-23 23.57215538179368 26.057849428534794 27.07478378528294 23.29521140438858 24-25 23.30526344504003 26.233297416242706 27.136334910957437 23.32510422775982 26-27 23.107987213476036 26.383679362273938 27.15938060274132 23.34895282150871 28-29 23.239392318492076 26.53439435299388 27.06127395812235 23.16493937039169 30-31 23.495997338225376 26.29818784783522 26.81487030212233 23.39094451181708 32-33 23.241209136447466 26.43080612975105 26.674503877637694 23.653480856163785 34-35 23.698980171568248 26.418056026477903 26.696943059957984 23.18602074199586 36-37 23.761282225059848 26.108934009709333 26.710713278048125 23.419070487182694 38-39 23.39983445168438 26.326727217426605 26.811827778120172 23.461610552768843 40-41 23.638881672608054 26.146135777055886 26.917822327025448 23.297160223310613 42-43 23.494420065894978 26.145143890136165 26.64868647403563 23.71174956993323 44-45 23.479714620342417 26.099307938116855 26.83377999431252 23.58719744722821 46-47 23.626267817676563 26.262005906143372 26.50023383722051 23.61149243895956 48-49 23.32934071512201 26.291609562023023 26.53588564519532 23.843164077659644 50-51 23.423697354555962 26.385648054357603 26.6182958449141 23.572358746172334 52-53 23.652577218909467 26.18142271404188 26.591020728235794 23.57497933881286 54-55 23.14570831664015 26.187775870245538 26.82378392086966 23.84273189224465 56-57 23.249085423012012 26.288110107435354 26.69287612895303 23.769928340599602 58-59 23.253114679421476 26.042956383099874 26.84663705728277 23.857291880195877 60-61 23.164942855476838 26.076889996792907 26.947924866614187 23.810242281116068 62-63 23.21207401855237 26.076716469794732 26.987664424839643 23.723545086813257 64-65 23.054345348678957 25.917083566310684 26.897947813438115 24.130623271572247 66-67 23.01697742574084 26.04839511894911 26.728541554848423 24.20608590046163 68-69 23.182534139140568 25.875007332641786 26.790776866526244 24.151681661691402 70-71 23.063227206875275 25.681549946507776 26.816608838959173 24.438614007657776 72-73 23.064133687379588 25.734510855950848 26.7615607792054 24.439794677464167 74-75 22.9970502915185 25.862955060988153 26.71941077974435 24.420583867749 76-77 23.011093485055056 25.57352895097924 26.91560090560846 24.499776658357238 78-79 22.982932173637995 25.568760524588686 26.85931515150853 24.5889921502648 80-81 23.053034549466183 25.64225824157001 26.738662032761457 24.56604517620235 82-83 23.013817649592802 25.595652436948818 26.831365197191424 24.559164716266952 84-85 22.927680339063038 25.54986138101498 26.88750953204818 24.634948747873793 86-87 22.980627724069684 25.573627679418404 26.769170206115767 24.676574390396148 88-89 22.897751739940908 25.35897243849044 26.801276889105385 24.941998932463267 90-91 22.81151653837546 25.32168785980526 26.9084030679082 24.958392533911088 92-93 22.895428444485106 25.170007528351597 27.08309452245448 24.85146950470882 94-95 22.792334844281022 24.992017589005705 27.13042895071025 25.08521861600302 96-97 22.83558795863686 24.779244288164097 27.13073983532241 25.254427917876633 98-99 22.75374991616634 24.736561828419465 27.118914040607567 25.390774214806626 100-101 22.899125394613122 24.511259311830802 27.201253649049345 25.38836164450673 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 153.0 1 124.0 2 172.5 3 265.5 4 241.5 5 247.0 6 382.0 7 670.5 8 981.5 9 1070.0 10 920.0 11 806.0 12 865.5 13 941.5 14 1022.0 15 1133.5 16 1248.5 17 1351.0 18 1474.5 19 1612.5 20 1697.0 21 1858.0 22 2078.5 23 2302.0 24 2661.0 25 3174.0 26 3973.5 27 5365.0 28 7270.0 29 10151.5 30 14112.0 31 19478.0 32 27580.0 33 33839.0 34 38544.5 35 45079.5 36 53220.0 37 61676.5 38 68461.5 39 75198.0 40 81006.5 41 85813.0 42 91150.0 43 96690.0 44 101894.5 45 108443.0 46 112978.5 47 115350.0 48 118141.0 49 119253.0 50 118376.5 51 116203.0 52 113926.0 53 112274.5 54 109255.5 55 102999.5 56 94252.0 57 83919.0 58 75578.5 59 66106.5 60 54052.5 61 44155.0 62 36411.0 63 27866.0 64 19427.0 65 13721.5 66 9952.0 67 7439.0 68 5506.0 69 4039.5 70 2999.0 71 2188.5 72 1501.5 73 1044.5 74 771.5 75 543.0 76 393.5 77 284.5 78 201.5 79 142.0 80 126.5 81 118.5 82 90.0 83 66.0 84 57.0 85 52.0 86 40.5 87 34.5 88 34.5 89 29.5 90 23.5 91 20.0 92 19.5 93 18.0 94 15.0 95 9.0 96 5.5 97 8.0 98 8.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05737418219975087 2 0.07998935414413937 3 0.07675342118103555 4 0.07628075681563835 5 0.07268123587915208 6 0.011198509580179511 7 0.015088900895371743 8 0.01828847506113732 9 0.00669001871023711 10-11 0.013652728400511058 12-13 0.023578680073851988 14-15 0.04177625814164369 16-17 0.028323503126492983 18-19 0.010671307018774955 20-21 0.021724381409601486 22-23 0.039031168942606186 24-25 0.0355770831954729 26-27 0.02166984321359412 28-29 0.011162150782841265 30-31 0.011671173945576699 32-33 0.008653393766502348 34-35 0.005399281404729407 36-37 7.998935414413935E-4 38-39 0.004054005903214336 40-41 9.63508129463497E-4 42-43 0.24018621521644756 44-45 0.20875403491753464 46-47 0.21580764160115418 48-49 0.2230612216701341 50-51 0.2135715755648521 52-53 0.22142507578991308 54-55 0.2175165050760517 56-57 0.2204979264577878 58-59 0.2291876790216284 60-61 0.23436880764232831 62-63 0.2191344715576036 64-65 0.21817096342814013 66-67 0.21658935574392643 68-69 0.21048107779110126 70-71 0.20268211576204767 72-73 0.21464416008633033 74-75 0.21297165540877105 76-77 0.2069542744492915 78-79 0.22531546710510528 80-81 0.23749566421341742 82-83 0.23575044194118164 84-85 0.23027844294177574 86-87 0.2502757814778106 88-89 0.2423859224554114 90-91 0.2497122201190678 92-93 0.2449673970664268 94-95 0.24847602100956748 96-97 0.2547115547530765 98-99 0.24862145619892043 100-101 0.2550387839291207 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2750366.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.235505565216364 #Duplication Level Percentage of deduplicated Percentage of total 1 78.58242693899673 47.33452215212146 2 11.932839838506926 14.375612810024387 3 3.995493488198683 7.220117107325325 4 1.7697329810911155 4.264030433258434 5 0.9807764820677257 2.953878362191191 6 0.5949349556442667 2.1501724698991183 7 0.398819534726263 1.6816167412464569 8 0.2845121351062999 1.3710185838053692 9 0.21917727168109877 1.1882028391304185 >10 1.1666882949842812 12.37331703435177 >50 0.055374779328833015 2.2387597720842414 >100 0.017528162923570196 1.7963524092721412 >500 9.081089701228264E-4 0.38556490673818716 >1k 7.870277740791158E-4 0.6668343785514946 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.8179398669122583E-5 0.0 12-13 0.0 0.0 0.0 3.6358797338245165E-5 0.0 14-15 0.0 0.0 0.0 7.271759467649033E-5 0.0 16-17 0.0 0.0 0.0 1.2725579068385807E-4 0.0 18-19 0.0 0.0 0.0 2.3633218269859357E-4 3.6358797338245165E-5 20-21 0.0 0.0 0.0 2.908703787059613E-4 3.6358797338245165E-5 22-23 0.0 0.0 0.0 4.181261693898194E-4 3.6358797338245165E-5 24-25 0.0 1.8179398669122583E-5 0.0 6.726377507575356E-4 3.6358797338245165E-5 26-27 0.0 3.6358797338245165E-5 0.0 0.0013634549001841937 3.6358797338245165E-5 28-29 0.0 3.6358797338245165E-5 0.0 0.004126723497890826 7.271759467649033E-5 30-31 0.0 3.6358797338245165E-5 0.0 0.01641599699821769 7.271759467649033E-5 32-33 0.0 3.6358797338245165E-5 0.0 0.04866625023724115 7.271759467649033E-5 34-35 0.0 3.6358797338245165E-5 0.0 0.10220457931780716 7.271759467649033E-5 36-37 0.0 3.6358797338245165E-5 0.0 0.19331972544744952 7.271759467649033E-5 38-39 0.0 3.6358797338245165E-5 0.0 0.33446457671451724 1.4543518935298066E-4 40-41 0.0 7.271759467649033E-5 0.0 0.484517333329455 1.4543518935298066E-4 42-43 0.0 7.271759467649033E-5 0.0 0.6471684132220948 1.4543518935298066E-4 44-45 0.0 7.271759467649033E-5 0.0 0.8520865950204446 1.4543518935298066E-4 46-47 1.8179398669122583E-5 7.271759467649033E-5 0.0 1.1003626426446518 1.6361458802210325E-4 48-49 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.3422577213359967 2.908703787059613E-4 50-51 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.5961330237502935 2.908703787059613E-4 52-53 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.8513717810647745 2.908703787059613E-4 54-55 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.1527134934041507 2.908703787059613E-4 56-57 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.5033395555355176 2.908703787059613E-4 58-59 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.8677819606554182 2.908703787059613E-4 60-61 3.6358797338245165E-5 7.271759467649033E-5 0.0 3.243441054754167 2.908703787059613E-4 62-63 3.6358797338245165E-5 7.271759467649033E-5 0.0 3.620227271570402 2.908703787059613E-4 64-65 3.6358797338245165E-5 1.0907639201473549E-4 0.0 4.0354265577744926 2.908703787059613E-4 66-67 3.6358797338245165E-5 1.0907639201473549E-4 0.0 4.528379132086421 2.908703787059613E-4 68-69 3.6358797338245165E-5 1.0907639201473549E-4 0.0 5.050164232687576 2.908703787059613E-4 70-71 3.6358797338245165E-5 1.0907639201473549E-4 0.0 5.58092995623128 2.908703787059613E-4 72-73 3.6358797338245165E-5 1.0907639201473549E-4 0.0 6.116167811847587 3.2722917604420645E-4 74-75 3.6358797338245165E-5 1.0907639201473549E-4 0.0 6.680529064131829 3.2722917604420645E-4 76-77 3.6358797338245165E-5 1.0907639201473549E-4 0.0 7.320153026906237 3.2722917604420645E-4 78-79 3.6358797338245165E-5 1.0907639201473549E-4 0.0 8.022768606069157 3.2722917604420645E-4 80-81 3.6358797338245165E-5 1.0907639201473549E-4 0.0 8.732855918085084 3.2722917604420645E-4 82-83 7.271759467649033E-5 1.0907639201473549E-4 0.0 9.460468170418046 3.6358797338245164E-4 84-85 7.271759467649033E-5 1.0907639201473549E-4 0.0 10.216476643472177 3.6358797338245164E-4 86-87 7.271759467649033E-5 1.0907639201473549E-4 0.0 11.026950594939002 3.6358797338245164E-4 88-89 7.271759467649033E-5 1.0907639201473549E-4 0.0 11.9006706743757 3.6358797338245164E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2465 0.0 55.831345 1 GTATCAA 4765 0.0 43.323483 1 TCAACGC 5780 0.0 35.143463 4 CAACGCA 5995 0.0 34.0402 5 ATCAACG 6085 0.0 33.225365 3 TATCAAC 6280 0.0 32.11811 2 AACGCAG 6410 0.0 31.967558 6 GTACATG 7520 0.0 28.903116 1 ACGCAGA 7285 0.0 27.675684 7 TACATGG 7880 0.0 26.861444 2 CGCAGAG 7705 0.0 25.798132 8 ACATGGG 8195 0.0 25.01817 3 GCAGAGT 8555 0.0 21.68261 9 GTATAGG 695 0.0 20.484882 1 CATGGGG 6305 0.0 20.474459 4 AGAGTAC 7135 0.0 19.814945 10-11 GAGTACA 5870 0.0 19.241364 1 CAGAGTA 7715 0.0 18.663511 10-11 GAGTACT 4255 0.0 18.063498 12-13 TAAGGTG 1360 0.0 17.44793 5 >>END_MODULE