##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921680_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2750366 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268457725262746 33.0 31.0 34.0 28.0 34.0 2 31.39752309329013 33.0 31.0 34.0 28.0 34.0 3 31.465795097816073 34.0 31.0 34.0 28.0 34.0 4 34.94919148942359 37.0 35.0 37.0 32.0 37.0 5 34.68449689968535 37.0 35.0 37.0 32.0 37.0 6 34.658013151704175 37.0 35.0 37.0 32.0 37.0 7 34.536147189137736 37.0 35.0 37.0 31.0 37.0 8 34.48055349724364 37.0 35.0 37.0 31.0 37.0 9 36.05511121065342 39.0 37.0 39.0 31.0 39.0 10-11 35.948308334236245 39.0 37.0 39.0 31.0 39.0 12-13 35.87297508767924 39.0 37.0 39.0 30.0 39.0 14-15 37.09375152252464 40.0 38.0 41.0 31.0 41.0 16-17 37.06181922696834 40.0 38.0 41.0 31.0 41.0 18-19 37.03118930353269 40.0 38.0 41.0 31.0 41.0 20-21 36.97237422219443 40.0 37.5 41.0 30.5 41.0 22-23 36.878879210985005 40.0 37.0 41.0 30.0 41.0 24-25 36.79427574366466 40.0 37.0 41.0 30.0 41.0 26-27 36.66127635376528 40.0 37.0 41.0 30.0 41.0 28-29 36.536081197920566 40.0 37.0 41.0 30.0 41.0 30-31 36.369336299241624 40.0 36.5 41.0 29.5 41.0 32-33 36.2960633239358 40.0 36.5 41.0 29.5 41.0 34-35 36.406402093394114 40.0 37.0 41.0 30.0 41.0 36-37 36.38101892620837 40.0 37.0 41.0 30.0 41.0 38-39 36.26528432943107 40.0 36.5 41.0 29.0 41.0 40-41 36.172154542340905 40.0 36.0 41.0 28.5 41.0 42-43 36.031759227680965 40.0 36.0 41.0 28.0 41.0 44-45 35.88318700129365 40.0 36.0 41.0 27.5 41.0 46-47 35.7082217421245 40.0 35.5 41.0 27.0 41.0 48-49 35.55206288908458 40.0 35.0 41.0 26.0 41.0 50-51 35.38982702665754 39.5 35.0 41.0 26.0 41.0 52-53 35.21046017148264 39.0 35.0 41.0 25.5 41.0 54-55 34.99489649741162 39.0 35.0 41.0 24.5 41.0 56-57 34.764372268999836 39.0 35.0 41.0 24.0 41.0 58-59 34.52096811842497 38.5 34.5 40.5 23.5 41.0 60-61 34.24726145538448 38.0 34.0 40.0 23.0 41.0 62-63 33.94416706721941 37.5 34.0 40.0 22.5 41.0 64-65 33.610037536822375 37.0 34.0 40.0 22.0 41.0 66-67 33.25802965859816 36.0 33.5 39.0 20.5 41.0 68-69 32.89499324817133 36.0 33.0 39.0 20.0 41.0 70-71 32.49203124238738 35.0 33.0 39.0 18.5 40.0 72-73 32.1347707905057 35.0 33.0 37.5 17.5 40.0 74-75 31.728178904189477 35.0 32.5 37.0 14.0 39.0 76-77 29.010594408162405 33.0 28.0 34.5 7.5 36.5 78-79 30.566115927843786 34.5 31.0 36.0 7.0 37.5 80-81 30.737425491734555 35.0 32.0 35.5 7.0 37.0 82-83 30.549395244123872 35.0 32.0 35.0 3.5 37.0 84-85 30.336800811237488 35.0 32.0 35.0 2.0 36.5 86-87 30.109929187606305 35.0 31.0 35.0 2.0 36.0 88-89 29.823569663092112 34.5 31.0 35.0 2.0 36.0 90-91 29.609023853552582 34.0 31.0 35.0 2.0 35.0 92-93 29.434579070567338 34.0 31.0 35.0 2.0 35.0 94-95 29.31266584156436 34.0 31.0 35.0 2.0 35.0 96-97 29.088506402420624 34.0 31.0 35.0 2.0 35.0 98-99 28.86106285490731 34.0 31.0 35.0 2.0 35.0 100-101 27.73961192801249 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57164.0 3 18520.0 4 9882.0 5 7206.0 6 6215.0 7 6224.0 8 6596.0 9 7106.0 10 7937.0 11 8895.0 12 9593.0 13 10386.0 14 11190.0 15 12397.0 16 13639.0 17 14493.0 18 13370.0 19 11801.0 20 11190.0 21 11189.0 22 11785.0 23 13009.0 24 15313.0 25 18339.0 26 21573.0 27 25967.0 28 30817.0 29 37219.0 30 45192.0 31 55634.0 32 69907.0 33 91905.0 34 128594.0 35 191046.0 36 333059.0 37 637762.0 38 680728.0 39 87521.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.874020915781095 20.022668353681677 13.38248694857882 25.72082378195841 2 15.413489957849109 21.67605878073283 36.83805411442951 26.072397146988553 3 17.598647010353965 25.090125371901244 29.645956558007143 27.665271059737652 4 12.895388276086756 17.29258296099786 35.826999266964535 33.985029495950855 5 13.747638348671565 37.53977302689601 34.68713461458032 14.025454009852108 6 32.8626440891934 36.250101352837675 17.029203797559024 13.85805076040989 7 28.212790588598025 32.24959878067138 21.506555854748058 18.03105477598254 8 26.489819900333266 34.399276314497776 20.377615197395546 18.73328858777341 9 26.511227790658904 15.2062473208082 19.72495994165134 38.557564946881556 10-11 25.110493373671595 25.61014405472985 28.37170081855768 20.907661753040877 12-13 25.761843254637363 23.22089623057408 27.954671264865137 23.06258924992342 14-15 22.977728125139194 24.82143684999459 25.324233446991013 26.876601577875203 16-17 22.941892097269964 27.84387605140552 26.223637145019975 22.99059470630454 18-19 22.9751095828824 27.06225885721111 27.600015343694206 22.362616216212285 20-21 23.642270971879817 26.27443979514648 27.439725519119257 22.643563713854444 22-23 23.423155318237647 26.15010147740337 27.133825098186932 23.29291810617205 24-25 23.22710294679609 26.36118476859068 27.1806461957654 23.231066088847825 26-27 23.009996014974387 26.55975938589883 27.173220627888778 23.257023971238006 28-29 23.168520128157276 26.663829312222738 27.07394277791787 23.09370778170212 30-31 23.41275930961803 26.486073301627915 26.821213004991456 23.279954383762597 32-33 23.186613988549237 26.56326192212099 26.663515191624832 23.586608897704938 34-35 23.55235443364778 26.536288522777994 26.762791230428963 23.148565813145268 36-37 23.638543278077016 26.281618336703637 26.720015882230065 23.35982250298928 38-39 23.400012943731852 26.456478883174096 26.806686819136072 23.33682135395798 40-41 23.59571867178035 26.30167314603522 26.884507255292938 23.218100926891488 42-43 23.476134625478643 26.27342934547736 26.58658119594408 23.66385483309992 44-45 23.39179957547963 26.261829982773744 26.762400403612514 23.58397003813411 46-47 23.566121442698577 26.36962138170471 26.48270092116193 23.581556254434783 48-49 23.25641012121819 26.43715818580511 26.536190102008145 23.770241590968553 50-51 23.394575137257753 26.442460822455732 26.542049958186382 23.620914082100132 52-53 23.59114409015165 26.26999828018699 26.511135698336798 23.627721931324558 54-55 23.099736495436577 26.305460220337373 26.69568113584393 23.89912214838212 56-57 23.181608523337054 26.370751198982887 26.573722425757058 23.873917851923 58-59 23.12344052253166 26.179657259057947 26.70416352187764 23.992738696532754 60-61 23.07612032233925 26.293222250745963 26.723726667602378 23.906930759312413 62-63 23.091896452498904 26.275946653380622 26.738824676039023 23.893332218081444 64-65 22.87732164464003 26.097538219622766 26.639057518170222 24.386082617566977 66-67 22.849742318159716 26.271778258459676 26.517445072411228 24.36103435096938 68-69 23.050634555298366 26.106856733139733 26.503319651661204 24.339189059900697 70-71 22.963300125271562 25.985881388968025 26.49933834928972 24.551480136470687 72-73 22.911891385835904 26.138556675233378 26.307666176135758 24.641885762794963 74-75 22.856325594073745 26.312688539096023 26.237222893331037 24.593762973499192 76-77 22.885326092007286 26.006617270686533 26.451370604514302 24.65668603279188 78-79 22.825657979130188 26.084753290691705 26.379774234558575 24.709814495619536 80-81 22.879667159063622 26.196597367252934 26.207530762681646 24.716204711001797 82-83 22.85630532876392 26.108611947903448 26.276782658632 24.758300064700624 84-85 22.81048016348313 26.055405647516334 26.290244397092298 24.84386979190824 86-87 22.77144309390496 26.166376017892272 26.188570353679474 24.873610534523287 88-89 22.612833602311454 26.046375341267318 26.166772756670497 25.174018299750728 90-91 22.448670346907093 26.067393111164684 26.249630292290643 25.234306249637584 92-93 22.551214645410486 25.899908961846734 26.355299812012124 25.193576580730653 94-95 22.403394960103835 25.745665620574552 26.434846448816966 25.41609297050464 96-97 22.404168400045382 25.595270130708876 26.463201945650937 25.537359523594798 98-99 22.26430790503652 25.619473072707518 26.36967082087806 25.7465482013779 100-101 22.09475812352599 25.6583818739398 26.40637472796748 25.84048527456673 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 149.0 1 119.5 2 150.0 3 231.0 4 201.5 5 196.5 6 337.5 7 630.5 8 911.5 9 966.0 10 789.0 11 633.0 12 625.5 13 638.0 14 679.5 15 731.5 16 796.0 17 845.5 18 962.0 19 1096.0 20 1209.0 21 1394.0 22 1648.0 23 1983.5 24 2376.5 25 2985.0 26 3868.0 27 5334.0 28 7537.5 29 10616.5 30 14881.5 31 20564.5 32 28798.0 33 34885.0 34 39298.5 35 45891.0 36 53985.0 37 62087.5 38 68732.0 39 75478.5 40 81344.5 41 86531.5 42 92173.5 43 97500.0 44 102536.5 45 109157.0 46 113942.0 47 116198.5 48 118787.5 49 119869.0 50 119056.5 51 117460.0 52 115087.5 53 112800.5 54 109620.5 55 103377.0 56 94079.5 57 83128.0 58 74272.0 59 64998.0 60 53362.0 61 43312.5 62 35457.5 63 26879.5 64 18326.5 65 12752.5 66 9346.0 67 6914.0 68 5046.5 69 3646.0 70 2628.0 71 1809.5 72 1183.0 73 853.0 74 626.0 75 412.5 76 268.0 77 163.0 78 99.5 79 50.5 80 35.5 81 31.0 82 20.5 83 13.5 84 7.0 85 8.0 86 8.0 87 4.5 88 3.0 89 2.0 90 1.5 91 3.5 92 3.5 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17045004192169333 2 3.272291760442065E-4 3 0.011198509580179511 4 0.005744689979442736 5 0.02548751693410986 6 0.0026541922056918968 7 0.0 8 0.0 9 1.0907639201473549E-4 10-11 0.05255664155243339 12-13 4.908437640663097E-4 14-15 0.005399281404729407 16-17 0.0 18-19 0.0018361192655813807 20-21 3.8176737205157426E-4 22-23 0.0 24-25 8.362523387796388E-4 26-27 0.0025451158136771614 28-29 0.005508357796744142 30-31 0.017015917154298735 32-33 0.01203476191895915 34-35 0.01048951303208373 36-37 0.0044539526739350325 38-39 0.0 40-41 0.0035631621391480264 42-43 0.009544184301289355 44-45 0.007399015258332891 46-47 0.0032541123617729423 48-49 0.008817008354524453 50-51 0.002399680624324181 52-53 0.002436039421662426 54-55 0.004690284856633626 56-57 0.008089832407759548 58-59 0.016234203011526466 60-61 0.007998935414413936 62-63 0.022306122167013408 64-65 0.04204894912168053 66-67 0.06270074600980378 68-69 0.05210215658570533 70-71 0.07042699044418088 72-73 0.03504988063406834 74-75 0.0280144533491179 76-77 0.23580498013718898 78-79 0.08818826294391365 80-81 0.06929986772669527 82-83 0.028323503126492983 84-85 0.053029305917830574 86-87 0.06969981449741598 88-89 0.2980512411802647 90-91 0.30305057581427347 92-93 0.055210833758125286 94-95 0.010525871829421975 96-97 0.015925153234151383 98-99 8.907905347870066E-4 100-101 1.9997338536034839E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2750366.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.23156561307431 #Duplication Level Percentage of deduplicated Percentage of total 1 77.65237451494934 45.99471716093241 2 12.518310397987317 14.829582474064324 3 4.108103725338474 7.299882460581024 4 1.8436092201895595 4.367994419621066 5 1.0166499405382903 3.010888382926092 6 0.6273424772446292 2.22950862616703 7 0.41291831585792704 1.712045882300526 8 0.29388439575393904 1.3925786295806513 9 0.2187950008394954 1.16636134032335 >10 1.232384741039598 12.886159349574624 >50 0.05553845331948162 2.226751340308902 >100 0.018366305486778416 1.837278971283188 >500 9.227739938496562E-4 0.37994144758298454 >1k 7.997374613121436E-4 0.6663095147539144 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.8179398669122583E-5 0.0 12-13 0.0 0.0 0.0 3.6358797338245165E-5 0.0 14-15 1.8179398669122583E-5 0.0 0.0 7.271759467649033E-5 1.8179398669122583E-5 16-17 3.6358797338245165E-5 0.0 0.0 1.9997338536034839E-4 3.6358797338245165E-5 18-19 3.6358797338245165E-5 1.8179398669122583E-5 0.0 3.090497773750839E-4 3.6358797338245165E-5 20-21 3.6358797338245165E-5 3.6358797338245165E-5 0.0 3.999467707206968E-4 3.6358797338245165E-5 22-23 3.6358797338245165E-5 3.6358797338245165E-5 0.0 5.635613587428001E-4 1.0907639201473549E-4 24-25 3.6358797338245165E-5 3.6358797338245165E-5 0.0 8.180729401105161E-4 1.2725579068385807E-4 26-27 3.6358797338245165E-5 3.6358797338245165E-5 0.0 0.0014543518935298066 1.4543518935298066E-4 28-29 3.6358797338245165E-5 3.6358797338245165E-5 0.0 0.0044539526739350325 1.4543518935298066E-4 30-31 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.0173067875330047 1.4543518935298066E-4 32-33 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.0506296252935064 1.4543518935298066E-4 34-35 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.10574956205828606 1.8179398669122582E-4 36-37 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.1985008540681495 1.8179398669122582E-4 38-39 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.3417545155808354 1.8179398669122582E-4 40-41 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.4936433914613546 1.8179398669122582E-4 42-43 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.659675839506451 1.8179398669122582E-4 44-45 3.6358797338245165E-5 7.271759467649033E-5 0.0 0.8662847053810292 1.8179398669122582E-4 46-47 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.1164695898654942 2.1815278402947098E-4 48-49 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.3608916049718474 2.5451158136771614E-4 50-51 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.615621339123593 2.5451158136771614E-4 52-53 3.6358797338245165E-5 7.271759467649033E-5 0.0 1.8724053453249496 2.5451158136771614E-4 54-55 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.1755286387338995 2.5451158136771614E-4 56-57 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.526645544629333 2.5451158136771614E-4 58-59 3.6358797338245165E-5 7.271759467649033E-5 0.0 2.8937603213535943 2.908703787059613E-4 60-61 3.6358797338245165E-5 7.271759467649033E-5 0.0 3.271400969907278 2.908703787059613E-4 62-63 3.6358797338245165E-5 7.271759467649033E-5 0.0 3.650768661334528 2.908703787059613E-4 64-65 3.6358797338245165E-5 7.271759467649033E-5 0.0 4.069749262461796 2.908703787059613E-4 66-67 3.6358797338245165E-5 7.271759467649033E-5 0.0 4.565428746574092 2.908703787059613E-4 68-69 3.6358797338245165E-5 7.271759467649033E-5 0.0 5.088540943278095 2.908703787059613E-4 70-71 3.6358797338245165E-5 7.271759467649033E-5 0.0 5.624287822057138 2.908703787059613E-4 72-73 3.6358797338245165E-5 7.271759467649033E-5 0.0 6.1665429255597255 3.2722917604420645E-4 74-75 3.6358797338245165E-5 9.089699334561291E-5 0.0 6.738266834304962 3.2722917604420645E-4 76-77 3.6358797338245165E-5 1.0907639201473549E-4 0.0 7.385235274141696 3.2722917604420645E-4 78-79 3.6358797338245165E-5 1.0907639201473549E-4 0.0 8.095140792170932 3.2722917604420645E-4 80-81 3.6358797338245165E-5 1.0907639201473549E-4 0.0 8.811754508309075 3.2722917604420645E-4 82-83 3.6358797338245165E-5 1.0907639201473549E-4 0.0 9.547965616212533 3.2722917604420645E-4 84-85 3.6358797338245165E-5 1.0907639201473549E-4 0.0 10.313136506195903 3.2722917604420645E-4 86-87 3.6358797338245165E-5 1.0907639201473549E-4 0.0 11.136954136285862 3.2722917604420645E-4 88-89 3.6358797338245165E-5 1.0907639201473549E-4 0.0 12.023890638555013 3.2722917604420645E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2415 0.0 55.499912 1 GTATCAA 4725 0.0 43.455254 1 TCAACGC 5965 0.0 33.574253 4 CAACGCA 6175 0.0 32.538307 5 ATCAACG 6215 0.0 32.224308 3 TATCAAC 6375 0.0 31.787766 2 AACGCAG 6610 0.0 30.539032 6 ACGCAGA 7705 0.0 25.150547 7 GTACATG 7395 0.0 24.037748 1 CGCAGAG 7965 0.0 23.792881 8 TACATGG 7615 0.0 22.747581 2 ACATGGG 7940 0.0 21.33831 3 GCAGAGT 8905 0.0 20.267939 9 AGAGTAC 7550 0.0 19.564707 10-11 TAAGGTG 1645 0.0 19.346413 5 CATGGGG 5800 0.0 19.064802 4 CAGAGTA 8285 0.0 17.485065 10-11 GAGTACT 4255 0.0 17.396675 12-13 GTAAGGT 1360 0.0 17.09864 4 AGTACTT 4745 0.0 16.800192 12-13 >>END_MODULE