##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921679_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3344189 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.92861527862211 31.0 31.0 34.0 26.0 34.0 2 29.993931563078522 31.0 31.0 34.0 25.0 34.0 3 30.052699174598086 31.0 31.0 34.0 25.0 34.0 4 33.49541428430032 37.0 35.0 37.0 28.0 37.0 5 33.48762435376709 37.0 35.0 37.0 28.0 37.0 6 33.526637399979485 37.0 35.0 37.0 28.0 37.0 7 33.42017601277918 37.0 35.0 37.0 27.0 37.0 8 33.3877576895325 37.0 35.0 37.0 27.0 37.0 9 34.89631507070922 39.0 35.0 39.0 27.0 39.0 10-11 34.783300226153486 39.0 35.0 39.0 27.0 39.0 12-13 34.66399088089818 39.0 35.0 39.0 27.0 39.0 14-15 35.74711940622973 40.0 36.0 41.0 27.0 41.0 16-17 35.6789248454558 40.0 36.0 41.0 27.0 41.0 18-19 35.645091530412905 40.0 36.0 41.0 26.5 41.0 20-21 35.565357101527454 40.0 36.0 41.0 26.0 41.0 22-23 35.46507972486005 40.0 36.0 41.0 25.0 41.0 24-25 35.3508261644303 40.0 36.0 41.0 25.0 41.0 26-27 35.20272194544029 39.5 35.0 41.0 24.0 41.0 28-29 35.06372516625107 39.0 35.0 41.0 24.0 41.0 30-31 34.91502738033048 39.0 35.0 41.0 23.5 41.0 32-33 34.742013833548285 39.0 35.0 41.0 22.5 41.0 34-35 34.57132222491013 39.0 34.0 41.0 21.5 41.0 36-37 34.53469645405807 39.0 34.5 41.0 21.0 41.0 38-39 34.706734727014535 39.0 35.0 41.0 21.5 41.0 40-41 34.767842218247836 39.5 35.0 41.0 21.5 41.0 42-43 34.617301683606996 39.0 35.0 41.0 19.0 41.0 44-45 34.50086627878987 39.0 35.0 41.0 18.0 41.0 46-47 34.34916612069473 39.0 34.5 41.0 15.5 41.0 48-49 34.18982046170237 39.0 34.0 41.0 14.5 41.0 50-51 32.54645640542445 37.0 32.0 39.5 11.0 40.0 52-53 32.66035756352288 37.5 32.5 39.5 9.0 40.0 54-55 33.564365381262846 38.0 33.0 40.0 8.5 41.0 56-57 33.59624889621968 38.0 33.5 41.0 8.0 41.0 58-59 33.4152392403659 38.0 33.0 40.5 7.0 41.0 60-61 33.17695261840763 38.0 33.0 40.0 4.0 41.0 62-63 32.89773843523796 37.0 33.0 40.0 2.0 41.0 64-65 32.61786549743451 37.0 33.0 40.0 2.0 41.0 66-67 32.29125163081393 36.0 32.0 39.5 2.0 41.0 68-69 31.937500691498 36.0 32.0 39.0 2.0 41.0 70-71 31.533328110343046 35.0 32.0 39.0 2.0 40.5 72-73 31.175136034476523 35.0 31.0 37.5 2.0 40.0 74-75 30.78007597656711 35.0 31.0 37.0 2.0 39.0 76-77 30.407285742522326 35.0 31.0 36.5 2.0 39.0 78-79 30.058755500960025 35.0 31.0 36.0 2.0 39.0 80-81 29.740533504535776 35.0 30.0 36.0 2.0 37.0 82-83 29.425953497245523 35.0 30.0 35.0 2.0 37.0 84-85 29.1607573615008 35.0 30.0 35.0 2.0 36.5 86-87 28.922634904905195 34.0 30.0 35.0 2.0 36.0 88-89 28.699195380404635 34.0 30.0 35.0 2.0 36.0 90-91 28.473856890265473 34.0 29.0 35.0 2.0 35.5 92-93 28.27982808387923 34.0 29.0 35.0 2.0 35.0 94-95 28.04918262693885 34.0 29.0 35.0 2.0 35.0 96-97 27.813723895389884 34.0 29.0 35.0 2.0 35.0 98-99 27.54002809051761 34.0 29.0 35.0 2.0 35.0 100-101 26.47999649541339 33.0 26.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 141080.0 3 23440.0 4 15397.0 5 11673.0 6 10444.0 7 10528.0 8 11404.0 9 12029.0 10 13206.0 11 13880.0 12 13941.0 13 14107.0 14 14519.0 15 15280.0 16 15332.0 17 16053.0 18 15156.0 19 14881.0 20 14960.0 21 15900.0 22 17333.0 23 19888.0 24 23564.0 25 27584.0 26 32559.0 27 38811.0 28 45090.0 29 53177.0 30 62819.0 31 76651.0 32 94423.0 33 121612.0 34 165892.0 35 237287.0 36 386854.0 37 678249.0 38 718020.0 39 131152.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.80997800663062 18.16539815597969 13.039934824709764 24.98468901267992 2 15.677906504198855 19.21591464753985 39.976286993218274 25.129891855043024 3 19.095849861510434 23.575604290902298 29.21902418121186 28.109521666375404 4 13.050127956219582 15.502362821117444 36.86195451030712 34.58555471235585 5 14.134880951312272 37.23553297365878 34.628251508867685 14.001334566161267 6 33.85181984158908 35.50088446349775 16.815811784971444 13.831483909941728 7 29.015391719347107 31.48453859832655 21.174096357797513 18.32597332452884 8 26.419324332650035 35.38218410227545 19.682659219200392 18.515832345874113 9 26.603679865405933 15.433939367478464 19.307825014556006 38.6545557525596 10-11 25.650514094995426 25.22208664549277 28.0897737264261 21.03762553308571 12-13 26.015956446906728 22.634786274566398 27.88630541810039 23.46295186042648 14-15 23.14567586498929 24.30271435501031 24.851086730695794 27.700523049304604 16-17 23.57120712312763 27.430026556490457 25.70778049685478 23.290985823527134 18-19 23.595833574449383 26.803746188310363 26.876387538763613 22.72403269847664 20-21 24.00960915549616 26.077814778503104 26.818405863594734 23.094170202405998 22-23 23.868192485278524 25.87536887826606 26.558651831266516 23.6977868051889 24-25 23.720622125329648 26.093466571263107 26.52397911810737 23.661932185299875 26-27 23.5380185610172 26.275303510526076 26.478999742482262 23.707678185974466 28-29 23.680865749701535 26.476426108863492 26.304644678005516 23.538063463429456 30-31 23.86780607422518 26.13211168363272 26.25052541513964 23.749556827002458 32-33 23.568837291228494 26.21900070785461 26.276179331542416 23.93598266937448 34-35 23.967488086889823 26.276635351920824 26.24284353641816 23.513033024771197 36-37 24.026917324080205 26.10459528623878 26.276596317288075 23.591891072392936 38-39 23.85460332687607 26.20701379589586 26.249582092069527 23.68880078515854 40-41 23.98971455005717 26.063953932571334 26.310489553148393 23.635841964223108 42-43 23.827521206691546 26.05549392760726 26.19131686353474 23.925668002166454 44-45 23.695387290429956 26.200482201930637 26.347378055092914 23.756752452546497 46-47 23.949966109089775 26.129262508622553 26.114789202134258 23.80598218015341 48-49 23.740957284218474 26.242605500848082 26.12056255131947 23.89587466361397 50-51 23.875354762966726 26.231506741975874 26.22076440772507 23.672374087332333 52-53 24.034338622364608 26.06494964564734 26.24226457263042 23.65844715935763 54-55 23.5409310628265 25.975956448556854 26.538658738052167 23.944453750564485 56-57 23.68633265737952 26.13720713704142 26.322282831981774 23.854177373597285 58-59 23.696541422876784 25.983443616318908 26.430319724256073 23.88969523654824 60-61 23.65116550551444 26.047828052664475 26.529357437825496 23.771649003995588 62-63 23.68679274966569 26.032415991489582 26.593833694801226 23.686957564043496 64-65 23.482491470445588 25.93447522207707 26.55110832889956 24.031924978577788 66-67 23.517717273363903 26.055708329849843 26.372983431755138 24.05359096503112 68-69 23.69456184857686 25.928305831276937 26.47772271257206 23.89940960757414 70-71 23.56775005696417 25.78868593516137 26.457514918170094 24.18604908970437 72-73 23.528125916271666 25.954357104469917 26.36818790174556 24.149329077512856 74-75 23.49571934906958 26.09163228367255 26.396535866210986 24.016112501046884 76-77 23.57262612223973 25.721456679789895 26.53866338433659 24.167253813633785 78-79 23.49606935390679 25.742150695145373 26.574116473710585 24.187663477237255 80-81 23.618839071776534 25.871331571685495 26.385709162661797 24.124120193876173 82-83 23.544610873203506 25.923498784353406 26.466283789940103 24.065606552502985 84-85 23.481698929178318 25.95510820603652 26.496363162295566 24.066829702489592 86-87 23.46762970562513 25.97228540146149 26.42543729817512 24.134647594738258 88-89 23.35154747792047 25.75095879037298 26.52197761848311 24.37551611322344 90-91 23.36993152732949 25.77178824056637 26.543760084112645 24.314520147991495 92-93 23.38511761732245 25.663352346598856 26.74051261330513 24.211017422773565 94-95 23.308101643169795 25.491740686868503 26.795425472841274 24.404732197120424 96-97 23.316487920226006 25.34723054933354 26.822563180791313 24.513718349649142 98-99 23.202187618731447 25.336060113052945 26.783476554215728 24.678275713999874 100-101 23.369169481307654 25.18837135334494 26.911570160478753 24.53088900486865 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 17.0 2 30.0 3 45.5 4 49.0 5 59.5 6 97.5 7 184.0 8 304.0 9 370.5 10 364.0 11 370.5 12 459.5 13 569.5 14 645.0 15 749.0 16 841.0 17 941.0 18 1026.0 19 1114.0 20 1230.5 21 1346.5 22 1494.5 23 1758.0 24 2137.0 25 2660.0 26 3552.5 27 5073.0 28 7502.5 29 11104.5 30 16181.0 31 22929.0 32 32049.5 33 39218.5 34 44798.5 35 52531.5 36 62790.5 37 73428.0 38 82492.5 39 90862.5 40 98362.5 41 105057.5 42 111815.0 43 119361.5 44 126654.5 45 134785.5 46 139107.0 47 141518.5 48 144749.5 49 145283.0 50 143600.5 51 140804.5 52 138439.0 53 136421.0 54 133541.5 55 126270.5 56 115026.5 57 103323.5 58 93163.5 59 81700.0 60 67157.0 61 55014.0 62 45372.0 63 34675.5 64 25040.0 65 18407.5 66 13802.5 67 10634.5 68 8079.5 69 6055.5 70 4679.0 71 3467.0 72 2461.0 73 1776.0 74 1363.0 75 978.0 76 704.0 77 500.5 78 319.0 79 233.0 80 193.0 81 149.0 82 121.5 83 104.0 84 78.5 85 70.5 86 64.5 87 49.0 88 46.0 89 39.5 90 29.0 91 28.0 92 26.5 93 22.0 94 15.0 95 11.0 96 17.5 97 15.5 98 5.5 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05436295616067155 2 0.07664040519240987 3 0.0723942336991121 4 0.0723942336991121 5 0.06814806220581432 6 0.010585526117094459 7 0.013246858954443065 8 0.01767244614464075 9 0.006219744159196744 10-11 0.013426274651342973 12-13 0.02318947882431286 14-15 0.04148987990810328 16-17 0.028063605256760306 18-19 0.01086960097051931 20-21 0.021260760082638868 22-23 0.0383949591365799 24-25 0.035793431531531264 26-27 0.021828909789488572 28-29 0.01211055954074366 30-31 0.012095608232668668 32-33 0.008432537754295586 34-35 0.005502081371597119 36-37 6.877601714496399E-4 38-39 0.004515295038647636 40-41 0.0014203742671242564 42-43 0.23503456293887695 44-45 0.2030537149664687 46-47 0.20964724182754024 48-49 0.21676406447123653 50-51 0.20709056814671659 52-53 0.2149549561941625 54-55 0.2116507171095892 56-57 0.21458117349228764 58-59 0.2233725426403831 60-61 0.22823171776475554 62-63 0.21235342858911382 64-65 0.2127720652152136 66-67 0.20997617060519008 68-69 0.20430962484476803 70-71 0.19629572371657222 72-73 0.20798764663121613 74-75 0.20646261320756693 76-77 0.20102033706826974 78-79 0.2192758842278352 80-81 0.231132271531304 82-83 0.23004082604182957 84-85 0.22423971850873262 86-87 0.24584435867709628 88-89 0.23784540885697547 90-91 0.24479776711184686 92-93 0.23950500405329964 94-95 0.2424055578198481 96-97 0.25013538409461905 98-99 0.24345214938509754 100-101 0.24992606578156917 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3344189.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.83900386470806 #Duplication Level Percentage of deduplicated Percentage of total 1 78.01397461212505 45.90264553704063 2 12.011416437970567 14.134795564287364 3 4.111520936915984 7.257533888910832 4 1.8578194374367707 4.372489802370876 5 1.0541449401094238 3.1012419102530413 6 0.6486820423337389 2.290068311750495 7 0.4311293633409137 1.77570555930636 8 0.3178580290050158 1.496195983764369 9 0.2464851024459772 1.3052644105870632 >10 1.2208517277181674 12.630880521330296 >50 0.0635944095719798 2.531013406216955 >100 0.020530365989909795 2.052709502764018 >500 0.0011240279721014658 0.4511423856151633 >1k 8.685670643494284E-4 0.6983132158025606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.980523229996869E-5 0.0 3 0.0 0.0 0.0 5.980523229996869E-5 0.0 4 0.0 0.0 0.0 8.970784844995304E-5 0.0 5 0.0 0.0 0.0 1.1961046459993738E-4 0.0 6 0.0 0.0 0.0 1.1961046459993738E-4 0.0 7 0.0 0.0 0.0 1.1961046459993738E-4 0.0 8 0.0 0.0 0.0 1.1961046459993738E-4 0.0 9 0.0 0.0 0.0 1.4951308074992174E-4 0.0 10-11 0.0 0.0 0.0 1.7941569689990607E-4 0.0 12-13 0.0 1.4951308074992173E-5 0.0 2.0931831304989043E-4 5.980523229996869E-5 14-15 0.0 2.9902616149984345E-5 0.0 2.0931831304989043E-4 1.4951308074992174E-4 16-17 0.0 2.9902616149984345E-5 0.0 2.0931831304989043E-4 1.4951308074992174E-4 18-19 0.0 2.9902616149984345E-5 0.0 2.0931831304989043E-4 2.0931831304989043E-4 20-21 0.0 2.9902616149984345E-5 0.0 2.0931831304989043E-4 2.990261614998435E-4 22-23 0.0 2.9902616149984345E-5 0.0 2.3922092919987476E-4 3.289287776498278E-4 24-25 0.0 4.485392422497652E-5 0.0 2.990261614998435E-4 3.5883139379981214E-4 26-27 0.0 5.980523229996869E-5 0.0 4.485392422497652E-4 3.887340099497965E-4 28-29 0.0 5.980523229996869E-5 0.0 0.0014502768832742408 3.887340099497965E-4 30-31 0.0 5.980523229996869E-5 0.0 0.007027114795246321 4.1863662609978086E-4 32-33 0.0 5.980523229996869E-5 0.0 0.021649494092588668 4.485392422497652E-4 34-35 0.0 5.980523229996869E-5 0.0 0.04214773746340293 4.784418583997495E-4 36-37 0.0 7.475654037496086E-5 1.4951308074992173E-5 0.07865883178253383 4.784418583997495E-4 38-39 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.14149917962172592 4.933931664747417E-4 40-41 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.21150120402883926 5.083444745497339E-4 42-43 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.28374592464720144 5.083444745497339E-4 44-45 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.37180912920890535 5.083444745497339E-4 46-47 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.4766477014307505 5.232957826247261E-4 48-49 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.5928941217138146 5.681497068497026E-4 50-51 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.7185000608518239 5.681497068497026E-4 52-53 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.8462589883526319 5.831010149246948E-4 54-55 0.0 8.970784844995304E-5 2.9902616149984345E-5 0.9878329245147328 5.98052322999687E-4 56-57 0.0 8.970784844995304E-5 2.9902616149984345E-5 1.1498153961991981 6.13003631074679E-4 58-59 0.0 8.970784844995304E-5 2.9902616149984345E-5 1.3262258801760307 6.429062472246634E-4 60-61 0.0 8.970784844995304E-5 2.9902616149984345E-5 1.5209218139285787 6.578575552996556E-4 62-63 0.0 8.970784844995304E-5 2.9902616149984345E-5 1.7202526531843745 6.578575552996556E-4 64-65 0.0 8.970784844995304E-5 2.9902616149984345E-5 1.9322023964554633 6.578575552996556E-4 66-67 0.0 8.970784844995304E-5 2.9902616149984345E-5 2.1763722086281607 6.578575552996556E-4 68-69 0.0 8.970784844995304E-5 2.9902616149984345E-5 2.4456153644426197 6.578575552996556E-4 70-71 0.0 8.970784844995304E-5 2.9902616149984345E-5 2.731708644457595 7.176627875996243E-4 72-73 0.0 8.970784844995304E-5 2.9902616149984345E-5 3.033082161325212 7.77468019899593E-4 74-75 0.0 8.970784844995304E-5 2.9902616149984345E-5 3.345534597476399 8.073706360495773E-4 76-77 0.0 8.970784844995304E-5 2.9902616149984345E-5 3.689444585817369 8.522245602745539E-4 78-79 0.0 8.970784844995304E-5 2.9902616149984345E-5 4.0827237934219625 8.970784844995304E-4 80-81 0.0 8.970784844995304E-5 2.9902616149984345E-5 4.496695611402346 9.120297925745226E-4 82-83 0.0 8.970784844995304E-5 2.9902616149984345E-5 4.927024160416771 9.56883716799499E-4 84-85 0.0 8.970784844995304E-5 2.9902616149984345E-5 5.3759072827522605 9.56883716799499E-4 86-87 0.0 8.970784844995304E-5 2.9902616149984345E-5 5.8520167370923115 9.867863329494834E-4 88-89 0.0 8.970784844995304E-5 2.9902616149984345E-5 6.363904671655819 0.00103164025717446 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2245 0.0 40.38043 1 GTATCAA 4060 0.0 40.09793 1 TCAACGC 4495 0.0 35.05547 4 CAACGCA 4695 0.0 33.863907 5 ATCAACG 4680 0.0 33.4679 3 TATCAAC 5065 0.0 31.112757 2 AACGCAG 5115 0.0 31.065632 6 GTACATG 8435 0.0 27.515514 1 TACATGG 8610 0.0 26.351456 2 ACGCAGA 6320 0.0 24.620464 7 CGCAGAG 6335 0.0 24.039055 8 ACATGGG 9300 0.0 23.833857 3 CATGGGG 7555 0.0 22.176226 4 GAGTACA 6280 0.0 19.347918 1 ATGGGGG 4900 0.0 18.984007 5 GCAGAGT 7675 0.0 18.050508 9 GACGTAT 290 5.2687028E-8 18.003153 1 CGTACAC 560 0.0 17.798838 3 GTATAGG 1120 0.0 17.79857 1 AGAGTAC 6300 0.0 17.471588 10-11 >>END_MODULE