##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921679_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3344189 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.534289778478428 33.0 31.0 34.0 30.0 34.0 2 31.664900817507622 34.0 31.0 34.0 30.0 34.0 3 31.738616746840563 34.0 31.0 34.0 29.0 34.0 4 35.22796319227173 37.0 35.0 37.0 33.0 37.0 5 34.99669845215088 37.0 35.0 37.0 32.0 37.0 6 34.98254823516255 37.0 35.0 37.0 32.0 37.0 7 34.87482764879616 37.0 35.0 37.0 32.0 37.0 8 34.824745551163524 37.0 35.0 37.0 32.0 37.0 9 36.431790487918 39.0 37.0 39.0 32.0 39.0 10-11 36.32553767146534 39.0 37.0 39.0 32.0 39.0 12-13 36.25221406445628 39.0 37.0 39.0 32.0 39.0 14-15 37.51194146024642 40.0 38.0 41.0 32.0 41.0 16-17 37.481914748239404 40.0 38.0 41.0 32.0 41.0 18-19 37.44471395007878 40.0 38.0 41.0 32.0 41.0 20-21 37.39260116578339 40.0 38.0 41.0 32.0 41.0 22-23 37.309328659355074 40.0 38.0 41.0 31.0 41.0 24-25 37.22461215559288 40.0 38.0 41.0 31.0 41.0 26-27 37.10415589549514 40.0 37.0 41.0 31.0 41.0 28-29 36.99047272746846 40.0 37.0 41.0 30.5 41.0 30-31 36.84043515483126 40.0 37.0 41.0 30.0 41.0 32-33 36.79891492376777 40.0 37.0 41.0 30.0 41.0 34-35 36.93083554787125 40.0 37.0 41.0 30.0 41.0 36-37 36.93398474189108 40.0 37.0 41.0 30.0 41.0 38-39 36.83926626156596 40.0 37.0 41.0 30.0 41.0 40-41 36.76081226270405 40.0 37.0 41.0 30.0 41.0 42-43 36.64634011415025 40.0 37.0 41.0 30.0 41.0 44-45 36.52585993195959 40.0 37.0 41.0 30.0 41.0 46-47 36.377640587897396 40.0 36.0 41.0 29.5 41.0 48-49 36.246330874241856 40.0 36.0 41.0 29.0 41.0 50-51 36.10351239119559 40.0 36.0 41.0 29.0 41.0 52-53 35.9387456869214 39.5 35.0 41.0 28.0 41.0 54-55 35.73619403688009 39.0 35.0 41.0 28.0 41.0 56-57 35.51948185344787 39.0 35.0 41.0 28.0 41.0 58-59 35.28121242549389 39.0 35.0 41.0 27.5 41.0 60-61 35.014116875571325 38.0 35.0 40.0 27.0 41.0 62-63 34.71934809904583 38.0 34.5 40.0 26.0 41.0 64-65 34.38794383331803 37.0 34.0 40.0 26.0 41.0 66-67 34.04030842754402 37.0 34.0 39.5 26.0 41.0 68-69 33.682379046160364 36.0 34.0 39.0 26.0 41.0 70-71 33.286131256337484 35.5 34.0 39.0 25.0 40.0 72-73 32.919829889997246 35.0 33.0 38.0 24.5 40.0 74-75 32.51495355077121 35.0 33.0 37.0 23.5 39.0 76-77 29.78308896417039 33.0 29.0 34.5 19.0 36.5 78-79 31.358476898285353 34.5 31.5 36.0 20.5 38.0 80-81 31.53642168549684 35.0 32.0 36.0 22.0 37.0 82-83 31.34978435728363 35.0 32.0 35.0 21.0 37.0 84-85 31.144333648606583 35.0 32.0 35.0 20.0 36.5 86-87 30.92304292610256 35.0 32.0 35.0 20.0 36.0 88-89 30.64595317429727 35.0 32.0 35.0 18.0 36.0 90-91 30.444232966498006 35.0 32.0 35.0 16.0 35.5 92-93 30.281171159883606 34.0 32.0 35.0 10.5 35.0 94-95 30.17574186147972 34.0 32.0 35.0 4.5 35.0 96-97 29.972743615866207 34.0 31.0 35.0 2.0 35.0 98-99 29.772456939485178 34.0 31.0 35.0 2.0 35.0 100-101 28.65025900150978 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48354.0 3 17410.0 4 10082.0 5 7210.0 6 6402.0 7 6304.0 8 6762.0 9 7254.0 10 8216.0 11 9151.0 12 9788.0 13 10328.0 14 11111.0 15 11914.0 16 12816.0 17 13529.0 18 12768.0 19 11924.0 20 11627.0 21 11614.0 22 12584.0 23 14047.0 24 16650.0 25 20198.0 26 24284.0 27 29451.0 28 35427.0 29 43309.0 30 52815.0 31 65210.0 32 82847.0 33 110379.0 34 155741.0 35 232505.0 36 407752.0 37 798558.0 38 878142.0 39 119718.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.70750790793993 19.668449079336384 13.638377192785406 25.98566581993828 2 14.859747465897492 20.59239000748165 38.513663430997475 26.034199095623382 3 17.693004728111177 24.682086110836973 29.166943295562277 28.45796586548957 4 12.761718045615309 16.821635348469457 35.78587856671439 34.63076803920085 5 13.892064335240995 37.506168940126734 34.714338441365314 13.887428283266964 6 33.696369854083656 36.171768375901735 16.62790196967323 13.503959800341375 7 28.776244404846736 31.68777243152226 21.214829664232493 18.32115349939851 8 26.30877022799848 36.05056412780498 19.39334170407235 18.247323940124197 9 26.26615899998475 15.611049495109278 19.190183329949352 38.93260817495662 10-11 25.58754344618059 25.53421505924836 28.0517636886789 20.826477805892154 12-13 25.965442922811366 22.7757647433487 27.935822784526238 23.322969549313697 14-15 22.976680066177686 24.4913506243594 24.856150255941376 27.67581905352154 16-17 23.495547051916024 27.6973580141553 25.645290980862622 23.161803953066048 18-19 23.53583302794734 27.004688964553846 26.81093145792693 22.648546549571886 20-21 23.929536110635162 26.181178590512893 26.794542520276266 23.09474277857568 22-23 23.786379896590773 25.98426703753885 26.55841221892662 23.670940846943758 24-25 23.64900273416247 26.215589914204386 26.53701510554866 23.59839224608449 26-27 23.478223165178594 26.398223135275117 26.49955107402083 23.62400262552546 28-29 23.597542467789374 26.611892027673406 26.304207081030086 23.48635842350714 30-31 23.786125966133042 26.346679475166535 26.244275279465658 23.622919279234768 32-33 23.511236723712205 26.374843160778166 26.21379838240464 23.90012173310499 34-35 23.87538249346262 26.392572270031412 26.310615793540855 23.42142944296511 36-37 23.91848695004431 26.238171727814763 26.31717764084815 23.52616368129278 38-39 23.809629180647384 26.322420772270945 26.235733088052143 23.632216959029527 40-41 23.87550356026433 26.170899565752865 26.294058112233813 23.65953876174899 42-43 23.75656067852903 26.208307982297814 26.16531900586758 23.86981233330557 44-45 23.6740074905471 26.255835916108744 26.349841564521938 23.72031502882222 46-47 23.89656359798084 26.236949077985788 26.121341260014574 23.7451460640188 48-49 23.637065053968033 26.34607577580219 26.165701345219734 23.851157825010034 50-51 23.766308990993366 26.336095518931753 26.169039658310734 23.728555831764147 52-53 23.9899076361815 26.165746517200006 26.167421102011375 23.676924744607128 54-55 23.430862496514322 26.11599583438309 26.49822781857587 23.954913850526722 56-57 23.61309668261653 26.222672193720204 26.2362640443516 23.927967079311664 58-59 23.581342447514007 26.165117563001434 26.336397246844324 23.917142742640237 60-61 23.56310667707756 26.21256167512926 26.390914530883247 23.83341711690994 62-63 23.617017999295037 26.18219308187848 26.41431951825614 23.786469400570343 64-65 23.36290802309874 26.061680107826433 26.398226386155592 24.17718548291923 66-67 23.3653996909757 26.26504578514553 26.259615119929435 24.109939403949333 68-69 23.586784704929027 26.139668039451596 26.280372137357478 23.9931751182619 70-71 23.46325426783006 25.990221406051035 26.27208274116619 24.274441584952715 72-73 23.441386139828158 26.139911914724767 26.161763476363596 24.25693846908348 74-75 23.387839603595836 26.257513449843557 26.16235168456365 24.192295261996954 76-77 23.4297426779572 25.952309160511263 26.373800940185184 24.244147221346353 78-79 23.38575592213841 25.946615122468096 26.354924424770367 24.312704530623122 80-81 23.519836429333502 26.113480591019623 26.115964193631836 24.250718786015042 82-83 23.45680526363175 26.20202898802151 26.161185411888994 24.179980336457746 84-85 23.41587028049099 26.171669370527688 26.170741905058954 24.241718443922373 86-87 23.402780479192785 26.27934360103774 26.07260306355424 24.245272856215234 88-89 23.296057022812814 26.084604773285225 26.10228494041154 24.517053263490425 90-91 23.194819634555625 26.136796668196837 26.168469853710974 24.499913843536564 92-93 23.279809634564963 26.048153527383732 26.299468931656723 24.372567906394586 94-95 23.122596813420387 25.875322512031353 26.375820812278 24.62625986227026 96-97 23.105744315857223 25.815416988666406 26.34475764485203 24.73408105062434 98-99 22.985152329687473 25.808805257880824 26.320832041280305 24.885210371151388 100-101 22.99882646919732 25.782691519584088 26.31878682421992 24.89969518699867 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 19.0 2 24.0 3 36.5 4 32.5 5 37.5 6 60.0 7 134.5 8 217.5 9 244.5 10 228.0 11 204.0 12 233.0 13 257.5 14 276.0 15 332.5 16 381.5 17 431.0 18 495.5 19 560.5 20 622.0 21 766.5 22 952.0 23 1192.5 24 1621.5 25 2188.5 26 3178.5 27 4922.5 28 7489.0 29 11366.0 30 16597.5 31 23495.5 32 32884.5 33 40097.0 34 45704.5 35 53378.0 36 63406.5 37 74111.5 38 83614.0 39 91974.5 40 98891.0 41 105542.5 42 112509.5 43 120322.5 44 127445.0 45 135963.5 46 140858.5 47 142706.5 48 145903.0 49 146512.5 50 144976.5 51 141856.0 52 139657.5 53 138349.0 54 134744.0 55 126630.5 56 115300.0 57 102810.0 58 91854.0 59 80545.5 60 65990.5 61 53517.0 62 43952.5 63 33410.5 64 23783.5 65 17173.0 66 12781.5 67 9872.5 68 7338.0 69 5454.0 70 4185.0 71 3018.0 72 2052.5 73 1433.0 74 1025.5 75 721.5 76 497.0 77 310.0 78 182.5 79 102.0 80 65.5 81 47.0 82 32.0 83 18.5 84 19.0 85 12.0 86 7.0 87 7.5 88 6.0 89 3.5 90 3.0 91 3.0 92 1.5 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1631486737143146 2 2.0931831304989043E-4 3 0.01073503919784438 4 0.0053824709069971825 5 0.024729463556037057 6 0.0024221119081487322 7 0.0 8 0.0 9 0.0 10-11 0.05058027521769851 12-13 3.4388008572481995E-4 14-15 0.004829272508222472 16-17 0.0 18-19 0.0018091082770740527 20-21 2.3922092919987476E-4 22-23 0.0 24-25 6.130036310746792E-4 26-27 0.0028856024584734893 28-29 0.005502081371597119 30-31 0.017223906902390982 32-33 0.011916192535768762 34-35 0.010196792107144663 36-37 0.004051804488322879 38-39 0.0 40-41 0.0037527783268230352 42-43 0.00922495708227017 44-45 0.0072065304921462275 46-47 0.003722875710673051 48-49 0.009314664930720123 50-51 0.002930456382698466 52-53 0.0022875501354738025 54-55 0.004380733265972707 56-57 0.00817836551702072 58-59 0.015997899640241623 60-61 0.007655069734395992 62-63 0.022501718652863222 64-65 0.04214773746340294 66-67 0.0615096814205178 68-69 0.05123813277299817 70-71 0.06870126060458903 72-73 0.03524023313275655 74-75 0.027943994792160372 76-77 0.2339879713736275 78-79 0.08520750471938039 80-81 0.06786398735238947 82-83 0.028287874877885193 84-85 0.05222491910594766 86-87 0.06934416685181369 88-89 0.2973665663035194 90-91 0.3031676738366163 92-93 0.053092094974297205 94-95 0.009613691092219967 96-97 0.014981210691142156 98-99 8.372732521995617E-4 100-101 2.2426962112488262E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3344189.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.82697701329538 #Duplication Level Percentage of deduplicated Percentage of total 1 76.2312856536369 43.31993517533178 2 13.031613246926316 14.810943728584745 3 4.38977805295979 7.483734495270436 4 1.9983055722151346 4.5423065927123805 5 1.1188724280777447 3.1791068875591995 6 0.7100527439555239 2.4210090575392718 7 0.4823642987097825 1.918791344037061 8 0.3498918915805238 1.5906638783987892 9 0.2583210248978871 1.3211642649530821 >10 1.3347443352273642 13.385713225865608 >50 0.07028030468060734 2.6923917836772575 >100 0.022326678378499012 2.1365149377833808 >500 0.0013193711936404172 0.5286099190465449 >1k 8.443975602275319E-4 0.6691147092404091 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9902616149984345E-5 2 0.0 0.0 0.0 0.0 2.9902616149984345E-5 3 0.0 0.0 0.0 0.0 2.9902616149984345E-5 4 0.0 0.0 0.0 0.0 2.9902616149984345E-5 5 0.0 0.0 0.0 2.9902616149984345E-5 2.9902616149984345E-5 6 0.0 0.0 0.0 2.9902616149984345E-5 2.9902616149984345E-5 7 0.0 0.0 0.0 2.9902616149984345E-5 2.9902616149984345E-5 8 0.0 0.0 0.0 2.9902616149984345E-5 2.9902616149984345E-5 9 0.0 0.0 0.0 5.980523229996869E-5 2.9902616149984345E-5 10-11 0.0 0.0 0.0 8.970784844995304E-5 2.9902616149984345E-5 12-13 0.0 0.0 0.0 1.7941569689990607E-4 7.475654037496086E-5 14-15 0.0 0.0 0.0 1.7941569689990607E-4 1.495130807499217E-4 16-17 0.0 0.0 0.0 1.9436700497489824E-4 1.7941569689990607E-4 18-19 0.0 0.0 0.0 2.0931831304989043E-4 2.990261614998435E-4 20-21 0.0 0.0 0.0 2.0931831304989043E-4 3.289287776498278E-4 22-23 0.0 0.0 0.0 2.691235453498591E-4 4.3358793417477305E-4 24-25 0.0 0.0 0.0 3.4388008572482E-4 4.784418583997495E-4 26-27 0.0 0.0 0.0 5.083444745497339E-4 5.382470906997182E-4 28-29 0.0 0.0 0.0 0.001554936039799186 5.382470906997182E-4 30-31 0.0 0.0 0.0 0.007311189648671173 5.531983987747104E-4 32-33 0.0 0.0 0.0 0.02256152388516319 5.681497068497026E-4 34-35 0.0 0.0 0.0 0.043553160422452206 5.681497068497026E-4 36-37 0.0 0.0 0.0 0.08067725837265777 5.98052322999687E-4 38-39 0.0 0.0 0.0 0.145192152716249 6.279549391496712E-4 40-41 0.0 0.0 0.0 0.2162856226128368 6.429062472246634E-4 42-43 0.0 2.9902616149984345E-5 0.0 0.28938256779147353 6.578575552996556E-4 44-45 0.0 2.9902616149984345E-5 0.0 0.37909041624142653 7.027114795246322E-4 46-47 0.0 2.9902616149984345E-5 0.0 0.4854091679626959 7.475654037496087E-4 48-49 0.0 2.9902616149984345E-5 0.0 0.6026573258867846 7.475654037496087E-4 50-51 1.4951308074992173E-5 2.9902616149984345E-5 0.0 0.7293397592061932 7.77468019899593E-4 52-53 2.9902616149984345E-5 2.9902616149984345E-5 0.0 0.8592965289940252 8.372732521995617E-4 54-55 2.9902616149984345E-5 2.9902616149984345E-5 0.0 1.0021114237263504 8.67175868349546E-4 56-57 2.9902616149984345E-5 2.9902616149984345E-5 0.0 1.1649012660468652 8.821271764245382E-4 58-59 2.9902616149984345E-5 2.9902616149984345E-5 0.0 1.342941442603872 8.970784844995304E-4 60-61 2.9902616149984345E-5 2.9902616149984345E-5 0.0 1.539401630709269 8.970784844995304E-4 62-63 2.9902616149984345E-5 5.980523229996869E-5 0.0 1.7411545818732135 9.867863329494834E-4 64-65 2.9902616149984345E-5 8.970784844995304E-5 0.0 1.9570215678599503 0.0010166889490994678 66-67 2.9902616149984345E-5 8.970784844995304E-5 0.0 2.2037929076376965 0.00103164025717446 68-69 2.9902616149984345E-5 8.970784844995304E-5 0.0 2.4750993439665043 0.0010465915652494522 70-71 2.9902616149984345E-5 8.970784844995304E-5 0.0 2.765573357247452 0.0010764941813994364 72-73 2.9902616149984345E-5 8.970784844995304E-5 0.0 3.0712378995325924 0.0011961046459993737 74-75 2.9902616149984345E-5 8.970784844995304E-5 0.0 3.3879664097932265 0.001226007262149358 76-77 2.9902616149984345E-5 8.970784844995304E-5 0.0 3.736720621950494 0.0012409585702243503 78-79 2.9902616149984345E-5 8.970784844995304E-5 0.0 4.1365335511838595 0.0012858124944493269 80-81 2.9902616149984345E-5 8.970784844995304E-5 0.0 4.55741287349489 0.0013306664186743034 82-83 2.9902616149984345E-5 8.970784844995304E-5 0.0 4.995770274945585 0.00137552034289928 84-85 2.9902616149984345E-5 8.970784844995304E-5 0.0 5.451396437222896 0.0013904716509742722 86-87 2.9902616149984345E-5 8.970784844995304E-5 0.0 5.9359533806253175 0.0014502768832742408 88-89 2.9902616149984345E-5 8.970784844995304E-5 0.0 6.459697702492294 0.0014951308074992173 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2290 0.0 43.80148 1 GTATCAA 4075 0.0 39.197056 1 TCAACGC 4690 0.0 32.384926 4 CAACGCA 4950 0.0 30.80743 5 ATCAACG 5035 0.0 30.166803 3 TATCAAC 5140 0.0 29.550554 2 AACGCAG 5355 0.0 28.472773 6 GTACATG 8455 0.0 24.738928 1 TACATGG 8810 0.0 23.490345 2 ACATGGG 9065 0.0 22.410666 3 ACGCAGA 6725 0.0 21.965736 7 CGCAGAG 6750 0.0 21.32144 8 CCCTATA 645 0.0 19.869312 2 CATGGGG 7520 0.0 18.998287 4 AGAGTAC 6735 0.0 17.032434 10-11 TAAGGTG 1875 0.0 16.975758 5 GCAGAGT 7965 0.0 16.936737 9 CGTACAC 530 0.0 16.120384 3 CCTATAC 1155 0.0 16.027338 3 GAGTACA 6420 0.0 15.994127 1 >>END_MODULE