##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921678_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2671971 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.978317504194468 31.0 31.0 34.0 26.0 34.0 2 30.0407942301769 31.0 31.0 34.0 26.0 34.0 3 30.092594193574705 31.0 31.0 34.0 26.0 34.0 4 33.54887609184381 37.0 35.0 37.0 28.0 37.0 5 33.53388902798721 37.0 35.0 37.0 28.0 37.0 6 33.574234151493414 37.0 35.0 37.0 28.0 37.0 7 33.47164471470686 37.0 35.0 37.0 28.0 37.0 8 33.44095950143171 37.0 35.0 37.0 27.0 37.0 9 34.95295682475596 39.0 35.0 39.0 28.0 39.0 10-11 34.84062738704874 39.0 35.0 39.0 27.0 39.0 12-13 34.725249263558624 39.0 35.0 39.0 27.0 39.0 14-15 35.80468893562093 40.0 36.0 41.0 27.0 41.0 16-17 35.73545408988346 40.0 36.0 41.0 27.0 41.0 18-19 35.70713024205727 40.0 36.0 41.0 27.0 41.0 20-21 35.628359926062075 40.0 36.0 41.0 26.0 41.0 22-23 35.51814128970712 40.0 36.0 41.0 25.5 41.0 24-25 35.40334644350556 40.0 36.0 41.0 25.0 41.0 26-27 35.24825419138156 39.5 35.0 41.0 24.5 41.0 28-29 35.10175391125128 39.0 35.0 41.0 24.0 41.0 30-31 34.94271157883075 39.0 35.0 41.0 24.0 41.0 32-33 34.75312868290861 39.0 35.0 41.0 23.0 41.0 34-35 34.567931313625785 39.0 34.0 41.0 21.5 41.0 36-37 34.521620556510534 39.0 34.5 41.0 21.0 41.0 38-39 34.692834241090196 39.0 35.0 41.0 21.5 41.0 40-41 34.74180277405705 39.0 35.0 41.0 21.0 41.0 42-43 34.57698361995695 39.0 35.0 41.0 18.5 41.0 44-45 34.44361840005 39.0 34.5 41.0 17.0 41.0 46-47 34.268376790017555 39.0 34.0 41.0 15.0 41.0 48-49 34.095477084145 39.0 34.0 41.0 13.5 41.0 50-51 32.42367282429338 37.0 32.0 39.5 8.5 40.0 52-53 32.53805842204126 37.5 32.0 39.5 8.0 40.0 54-55 33.442066175119415 38.0 33.0 40.0 8.0 41.0 56-57 33.467116222444034 38.0 33.0 41.0 7.0 41.0 58-59 33.2782964336065 38.0 33.0 40.0 2.0 41.0 60-61 33.033538537656284 37.5 33.0 40.0 2.0 41.0 62-63 32.74773491179357 37.0 33.0 40.0 2.0 41.0 64-65 32.45542990548924 36.5 32.0 40.0 2.0 41.0 66-67 32.11637083636012 36.0 32.0 39.0 2.0 41.0 68-69 31.75087267039949 35.5 32.0 39.0 2.0 41.0 70-71 31.334820999180007 35.0 31.0 39.0 2.0 40.5 72-73 30.972994280252294 35.0 31.0 37.5 2.0 40.0 74-75 30.565277093201985 35.0 31.0 37.0 2.0 39.0 76-77 30.181239242491777 35.0 31.0 36.5 2.0 39.0 78-79 29.82583680736056 35.0 30.0 36.0 2.0 38.5 80-81 29.501834975005345 35.0 30.0 36.0 2.0 37.0 82-83 29.177134594649416 35.0 30.0 35.0 2.0 37.0 84-85 28.902939440585246 34.5 30.0 35.0 2.0 36.5 86-87 28.65421293868833 34.0 29.0 35.0 2.0 36.0 88-89 28.41567816417169 34.0 29.0 35.0 2.0 36.0 90-91 28.17434470658551 34.0 29.0 35.0 2.0 35.5 92-93 27.964946288713463 34.0 29.0 35.0 2.0 35.0 94-95 27.713497451881025 34.0 29.0 35.0 2.0 35.0 96-97 27.450436774950028 34.0 28.5 35.0 2.0 35.0 98-99 27.150740221357193 34.0 27.0 35.0 2.0 35.0 100-101 26.06276565127391 33.0 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 109064.0 3 18184.0 4 12285.0 5 9374.0 6 8424.0 7 8694.0 8 9279.0 9 9940.0 10 10991.0 11 11659.0 12 11631.0 13 11777.0 14 12636.0 15 13183.0 16 13819.0 17 14442.0 18 13607.0 19 12599.0 20 13068.0 21 13629.0 22 14897.0 23 17134.0 24 19911.0 25 23135.0 26 27413.0 27 31786.0 28 37409.0 29 43769.0 30 51855.0 31 62493.0 32 76511.0 33 98403.0 34 133764.0 35 192215.0 36 309145.0 37 538598.0 38 557007.0 39 98229.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58305030163004 18.365618294769874 13.05056375421739 25.0007676493827 2 16.20188544268951 19.744487683197686 39.013007831665995 25.040619042446803 3 19.006998805630055 23.35246048073671 29.85115880850643 27.789381905126803 4 13.404069647679224 15.848891951715538 36.46151138010719 34.28552702049805 5 14.293632522853612 36.84126754070095 34.62247584121773 14.242624095227715 6 33.6789750450003 35.26615958907776 16.937554296990363 14.117311068931585 7 28.630526781509978 31.721392044114687 21.24291898957247 18.40516218480286 8 26.225037797273355 34.59123357797843 20.2858405930176 18.89788803173062 9 26.552364027792542 15.205240220435993 19.776397599217905 38.46599815255357 10-11 25.40386386507409 25.126595509544003 28.37833664813906 21.09120397724285 12-13 25.809343698083598 22.861315688401646 27.82221204015031 23.50712857336445 14-15 23.216672254761722 24.608828666010325 25.02066284729262 27.153836231935337 16-17 23.320929605726178 27.425090968988187 26.05900256060856 23.194976864677077 18-19 23.317110107333054 26.823288233189253 27.26972950393834 22.589872155539354 20-21 23.843609799374484 26.147649449070613 27.104677518674702 22.904063232880198 22-23 23.75864598724543 25.98600617866692 26.713758269718674 23.541589564368977 24-25 23.560180806079735 26.14780730416278 26.794353581949494 23.497658307807992 26-27 23.371400891894897 26.298321735754893 26.837516484857517 23.492760887492693 28-29 23.531977935641756 26.423274252247403 26.694194088348016 23.35055372376283 30-31 23.787138834745228 26.215790069610605 26.495448969222174 23.501622126421992 32-33 23.526893021535827 26.298407700766617 26.414643074497686 23.76005620319987 34-35 23.948936093765 26.29122715024561 26.444025131104038 23.315811624885356 36-37 23.960778487038688 26.043413205027637 26.506052503937195 23.489755803996477 38-39 23.69409866491957 26.165952089956757 26.53812706983502 23.601822175288653 40-41 23.91569421469045 26.0507533851808 26.562198252954783 23.471354147173965 42-43 23.761077342807006 26.0395422099633 26.36773823848561 23.83164220874408 44-45 23.70680336105586 26.079235067458693 26.47119324008568 23.742768331399763 46-47 23.82886908724454 26.071612210477834 26.25581650904069 23.84370219323693 48-49 23.582588513378816 26.18463083191727 26.345331531225053 23.887449123478863 50-51 23.654086757716865 26.183407541644666 26.410232946089963 23.75227275454851 52-53 23.824050535108952 26.113350681460336 26.35324392221698 23.709354861213733 54-55 23.456124512941532 25.972776108565515 26.602365634872204 23.96873374362075 56-57 23.486498635601656 26.109789105704444 26.444517249029374 23.959195009664526 58-59 23.530112324569053 25.95410240684788 26.553948239548227 23.96183702903484 60-61 23.544106597524273 25.914836917806756 26.70863150802966 23.83242497663931 62-63 23.543558050271205 25.922978946523557 26.692971947951023 23.84049105525422 64-65 23.380428810129715 25.87422619706213 26.57829544879164 24.167049544016518 66-67 23.307975008222954 25.90850975334141 26.5225965254694 24.260918712966237 68-69 23.419112097440326 25.795602959362675 26.58779783251342 24.19748711068358 70-71 23.32392828160555 25.616353389943647 26.57795242873836 24.48176589971245 72-73 23.295972042695794 25.702931515218452 26.553644558866303 24.447451883219447 74-75 23.266069978641493 25.826577932294096 26.5640370764162 24.343315012648212 76-77 23.315015626022507 25.54038549126576 26.657411246123498 24.48718763658824 78-79 23.205844281765707 25.55230398126973 26.728440743434412 24.51341099353015 80-81 23.34303483142295 25.660328025300295 26.570506983146704 24.42613016013005 82-83 23.21063759071542 25.599586458465414 26.740614475304174 24.449161475514995 84-85 23.222821702914022 25.599844856472544 26.695189669151553 24.48214377146188 86-87 23.17863513685644 25.631371280736587 26.700901333212272 24.489092249194705 88-89 23.1240802797919 25.396629779379698 26.767358737072332 24.71193120375607 90-91 23.04257781796421 25.37862686208779 26.872461642070196 24.706333677877808 92-93 23.146591213486133 25.175164528601453 27.02275825794393 24.655485999968484 94-95 23.016036188067197 25.037902250648962 27.078883578467693 24.867177982816145 96-97 23.06488912435036 24.84821583845659 27.106813689174476 24.980081348018572 98-99 22.937753632146464 24.844502730452703 27.103469065905855 25.114274571494978 100-101 23.09169896718995 24.679907301672348 27.2250966107854 25.003297120352304 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 54.5 2 52.5 3 69.5 4 78.5 5 94.5 6 145.0 7 292.0 8 438.0 9 496.5 10 483.5 11 465.5 12 524.0 13 607.0 14 698.0 15 776.0 16 869.0 17 991.0 18 1087.0 19 1190.5 20 1338.0 21 1493.0 22 1673.5 23 1900.5 24 2176.0 25 2679.5 26 3548.5 27 4936.0 28 7074.0 29 10186.5 30 14421.5 31 19701.5 32 26820.0 33 32425.0 34 36521.0 35 42492.5 36 49796.0 37 57115.5 38 64045.5 39 70725.5 40 76772.5 41 82357.5 42 88250.5 43 94284.5 44 99686.0 45 105943.5 46 109941.5 47 112396.5 48 115224.0 49 115823.0 50 114633.5 51 112648.0 52 110710.0 53 108919.5 54 105551.0 55 99631.0 56 92261.0 57 83113.0 58 74503.5 59 65432.5 60 53844.5 61 44046.0 62 36359.0 63 27940.5 64 20198.5 65 14886.0 66 11267.5 67 8692.5 68 6693.0 69 5054.0 70 3809.5 71 2838.0 72 2003.0 73 1487.5 74 1153.0 75 842.5 76 587.5 77 406.5 78 270.0 79 195.0 80 142.5 81 107.5 82 90.5 83 63.5 84 56.0 85 55.5 86 44.5 87 38.0 88 34.5 89 30.5 90 24.0 91 17.0 92 14.5 93 17.0 94 15.5 95 11.0 96 8.5 97 7.5 98 6.5 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05542724827477544 2 0.07638555957381274 3 0.07275528065237234 4 0.0733915151025217 5 0.06826421394543578 6 0.012051028996946449 7 0.014558541241652697 8 0.018039117939528535 9 0.006549472280949158 10-11 0.013903594013557782 12-13 0.022792163537703067 14-15 0.04171078204067334 16-17 0.02735808135642191 18-19 0.010741134540756618 20-21 0.02155712019329551 22-23 0.03766882200443043 24-25 0.03489933086848622 26-27 0.02170682241686006 28-29 0.01242528455585783 30-31 0.012107167330783156 32-33 0.008869856746199715 34-35 0.00533314171448717 36-37 7.110855619316228E-4 38-39 0.004098098370079615 40-41 0.001160192232625279 42-43 0.23722188601597846 44-45 0.20537273795261998 46-47 0.21100528411423627 48-49 0.21835940584684488 50-51 0.20969538965804643 52-53 0.21650684083023355 54-55 0.2136999241383982 56-57 0.21622614916105 58-59 0.2259006553589092 60-61 0.2308408287365394 62-63 0.21381220080607163 64-65 0.21542149970939056 66-67 0.21160409300849448 68-69 0.20653293018524527 70-71 0.19906653178496325 72-73 0.2103129113302502 74-75 0.20905915520789708 76-77 0.2030523534873694 78-79 0.2212598864284081 80-81 0.2332173515356267 82-83 0.23267468097520522 84-85 0.226518177031113 86-87 0.2485618294509933 88-89 0.24021593048726952 90-91 0.24760747777576927 92-93 0.24240532550690108 94-95 0.2455864977576478 96-97 0.25282834282258304 98-99 0.24590461498272248 100-101 0.25324002393738554 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2671971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.68617327971997 #Duplication Level Percentage of deduplicated Percentage of total 1 80.19710765585192 51.07446894702944 2 11.30590843418342 14.400600872481059 3 3.5967961727450315 6.87198552927821 4 1.60794485365242 4.09615418295768 5 0.8820444505144415 2.808701785793906 6 0.5501100051836958 2.1020640667821904 7 0.36173475707843084 1.612625169441605 8 0.2621292617131809 1.3355207666520565 9 0.19672499847074323 1.1275796106954359 >10 0.9870736296061157 10.86196673156506 >50 0.04012151895064259 1.697482775221302 >100 0.010831680081307284 1.1997757099098547 >500 9.424524599912867E-4 0.4144088083560439 >1k 5.30129508696243E-4 0.3966650438362122 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1227666767341412E-4 2 0.0 0.0 0.0 0.0 1.1227666767341412E-4 3 0.0 0.0 0.0 0.0 1.1227666767341412E-4 4 0.0 0.0 0.0 0.0 1.4970222356455216E-4 5 0.0 0.0 0.0 0.0 1.4970222356455216E-4 6 0.0 0.0 0.0 0.0 1.4970222356455216E-4 7 0.0 0.0 0.0 0.0 1.4970222356455216E-4 8 0.0 0.0 0.0 0.0 1.871277794556902E-4 9 0.0 0.0 0.0 0.0 1.871277794556902E-4 10-11 0.0 0.0 0.0 0.0 2.2455333534682824E-4 12-13 0.0 0.0 0.0 0.0 2.4326611329239729E-4 14-15 0.0 0.0 0.0 0.0 2.619788912379663E-4 16-17 0.0 0.0 0.0 0.0 2.619788912379663E-4 18-19 0.0 0.0 0.0 0.0 2.994044471291043E-4 20-21 0.0 0.0 0.0 0.0 3.1811722507467334E-4 22-23 0.0 0.0 0.0 3.742555589113804E-5 3.742555589113804E-4 24-25 0.0 0.0 0.0 1.871277794556902E-4 4.1168111480251846E-4 26-27 0.0 0.0 0.0 6.736600060404847E-4 4.1168111480251846E-4 28-29 0.0 0.0 0.0 0.003480576697875838 4.1168111480251846E-4 30-31 0.0 0.0 0.0 0.015007647912346354 4.1168111480251846E-4 32-33 0.0 0.0 0.0 0.04811055209805795 4.491066706936565E-4 34-35 0.0 0.0 0.0 0.0973064453169589 4.491066706936565E-4 36-37 0.0 0.0 0.0 0.17187686543005146 4.491066706936565E-4 38-39 0.0 0.0 0.0 0.2880457909161439 4.491066706936565E-4 40-41 0.0 0.0 0.0 0.4150119892768297 4.491066706936565E-4 42-43 0.0 0.0 0.0 0.5503053738232937 4.678194486392255E-4 44-45 0.0 0.0 0.0 0.7286381476445665 4.865322265847945E-4 46-47 0.0 3.742555589113804E-5 0.0 0.9379779945216471 4.865322265847945E-4 48-49 0.0 3.742555589113804E-5 0.0 1.1444360735951102 4.865322265847945E-4 50-51 0.0 3.742555589113804E-5 0.0 1.3531771115779325 4.865322265847945E-4 52-53 0.0 3.742555589113804E-5 0.0 1.5624046817873398 5.426705604215016E-4 54-55 0.0 3.742555589113804E-5 0.0 1.817216579072153 5.800961163126396E-4 56-57 0.0 3.742555589113804E-5 0.0 2.108780372242064 5.988088942582087E-4 58-59 0.0 7.485111178227608E-5 0.0 2.4113098532880786 5.988088942582087E-4 60-61 0.0 7.485111178227608E-5 0.0 2.7188730716014504 5.988088942582087E-4 62-63 0.0 7.485111178227608E-5 0.0 3.0352312955492406 5.988088942582087E-4 64-65 0.0 7.485111178227608E-5 0.0 3.3866572653670266 5.988088942582087E-4 66-67 0.0 7.485111178227608E-5 0.0 3.8079380352556225 6.362344501493467E-4 68-69 0.0 7.485111178227608E-5 0.0 4.244320016946292 6.736600060404847E-4 70-71 0.0 7.485111178227608E-5 0.0 4.695466380436015 6.923727839860537E-4 72-73 0.0 7.485111178227608E-5 0.0 5.161489402392466 7.110855619316227E-4 74-75 0.0 7.485111178227608E-5 0.0 5.66364679856181 7.297983398771917E-4 76-77 0.0 7.485111178227608E-5 0.0 6.227968043066335 7.485111178227608E-4 78-79 0.0 1.4970222356455216E-4 0.0 6.854995806466462 8.046494516594678E-4 80-81 0.0 1.4970222356455216E-4 0.0 7.4915296610629385 8.60787785496175E-4 82-83 0.0 1.4970222356455216E-4 0.0 8.144568185807406 9.35638897278451E-4 84-85 0.0 1.871277794556902E-4 0.0 8.842161834840272 9.35638897278451E-4 86-87 0.0 1.871277794556902E-4 0.0 9.580044094789951 9.35638897278451E-4 88-89 0.0 1.871277794556902E-4 0.0 10.381362671975108 9.35638897278451E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1985 0.0 49.014782 1 GTATCAA 3785 0.0 45.642483 1 TCAACGC 4670 0.0 36.590485 4 CAACGCA 4760 0.0 35.794907 5 ATCAACG 4810 0.0 35.42481 3 TATCAAC 5005 0.0 33.854958 2 AACGCAG 5065 0.0 33.7142 6 ACGCAGA 5915 0.0 28.231012 7 GTACATG 6195 0.0 27.120373 1 CGCAGAG 6160 0.0 26.800642 8 TACATGG 6680 0.0 24.868507 2 ACATGGG 6790 0.0 23.696712 3 CATGGGG 5815 0.0 21.222971 4 GCAGAGT 7160 0.0 21.070213 9 AGAGTAC 5710 0.0 19.649426 10-11 GTATAAT 860 0.0 18.763515 1 CAGAGTA 6435 0.0 17.546206 10-11 GAGTACT 3415 0.0 17.226053 12-13 GAGTACA 4885 0.0 16.80797 1 GTATAGC 910 0.0 16.689463 1 >>END_MODULE