##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921678_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2671971 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.398511810195544 33.0 31.0 34.0 29.0 34.0 2 31.538252847804113 34.0 31.0 34.0 28.0 34.0 3 31.60805712337447 34.0 31.0 34.0 28.0 34.0 4 35.09194486017999 37.0 35.0 37.0 32.0 37.0 5 34.8420349622058 37.0 35.0 37.0 32.0 37.0 6 34.81593737357179 37.0 35.0 37.0 32.0 37.0 7 34.700280429690295 37.0 35.0 37.0 32.0 37.0 8 34.64678471435506 37.0 35.0 37.0 32.0 37.0 9 36.23586258982601 39.0 37.0 39.0 32.0 39.0 10-11 36.129876783842334 39.0 37.0 39.0 32.0 39.0 12-13 36.05930696852623 39.0 37.0 39.0 31.5 39.0 14-15 37.29978412939362 40.0 38.0 41.0 31.0 41.0 16-17 37.26380675538769 40.0 38.0 41.0 31.0 41.0 18-19 37.22681103200596 40.0 38.0 41.0 31.0 41.0 20-21 37.16650611103189 40.0 38.0 41.0 31.0 41.0 22-23 37.083000152322015 40.0 37.5 41.0 31.0 41.0 24-25 36.998661474993554 40.0 37.0 41.0 30.5 41.0 26-27 36.86645064635806 40.0 37.0 41.0 30.0 41.0 28-29 36.74200749184777 40.0 37.0 41.0 30.0 41.0 30-31 36.58215452188665 40.0 37.0 41.0 30.0 41.0 32-33 36.521387021041775 40.0 37.0 41.0 30.0 41.0 34-35 36.640663764689066 40.0 37.0 41.0 30.0 41.0 36-37 36.625618316965266 40.0 37.0 41.0 30.0 41.0 38-39 36.511222427189516 40.0 37.0 41.0 30.0 41.0 40-41 36.42864013119903 40.0 37.0 41.0 30.0 41.0 42-43 36.299014285708935 40.0 36.0 41.0 29.0 41.0 44-45 36.16179909886746 40.0 36.0 41.0 28.5 41.0 46-47 35.999224729609715 40.0 36.0 41.0 28.0 41.0 48-49 35.84760238790017 40.0 35.5 41.0 28.0 41.0 50-51 35.69269146259447 40.0 35.0 41.0 27.0 41.0 52-53 35.519809908116514 39.0 35.0 41.0 27.0 41.0 54-55 35.305178087636435 39.0 35.0 41.0 26.0 41.0 56-57 35.078833939440216 39.0 35.0 41.0 26.0 41.0 58-59 34.83737641613625 38.5 35.0 40.5 26.0 41.0 60-61 34.56356580965886 38.0 34.0 40.0 26.0 41.0 62-63 34.26148955209469 37.5 34.0 40.0 25.0 41.0 64-65 33.928648177693546 37.0 34.0 40.0 24.0 41.0 66-67 33.58048328368834 36.5 34.0 39.5 23.0 41.0 68-69 33.21984744594907 36.0 33.5 39.0 22.5 41.0 70-71 32.82054408524644 35.5 33.0 39.0 22.0 40.0 72-73 32.458489631811126 35.0 33.0 37.5 21.0 40.0 74-75 32.05294892796367 35.0 33.0 37.0 20.0 39.0 76-77 29.331927255198504 33.0 29.0 34.5 13.0 36.5 78-79 30.895236138416173 34.5 31.5 36.0 15.5 37.5 80-81 31.07141469724035 35.0 32.0 36.0 18.0 37.0 82-83 30.889518074859346 35.0 32.0 35.0 16.0 37.0 84-85 30.68070312140364 35.0 32.0 35.0 12.0 36.5 86-87 30.459035296416015 35.0 32.0 35.0 7.5 36.0 88-89 30.178841012870276 35.0 31.5 35.0 2.0 36.0 90-91 29.970979288323115 34.0 31.0 35.0 2.0 35.0 92-93 29.809594490359366 34.0 31.0 35.0 2.0 35.0 94-95 29.70082815270076 34.0 31.0 35.0 2.0 35.0 96-97 29.486401237139177 34.0 31.0 35.0 2.0 35.0 98-99 29.267802869117965 34.0 31.0 35.0 2.0 35.0 100-101 28.151380011235155 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 47042.0 3 15893.0 4 9022.0 5 6314.0 6 5601.0 7 5746.0 8 6062.0 9 6628.0 10 7424.0 11 8102.0 12 8791.0 13 9307.0 14 10211.0 15 11015.0 16 11841.0 17 12551.0 18 11922.0 19 10580.0 20 10216.0 21 10084.0 22 10795.0 23 12026.0 24 14124.0 25 17014.0 26 20601.0 27 24670.0 28 29531.0 29 35880.0 30 43365.0 31 53763.0 32 67838.0 33 89521.0 34 125593.0 35 186790.0 36 324528.0 37 624320.0 38 677393.0 39 89867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.501984259383526 19.876070948988076 13.665860166883226 25.956084624745174 2 15.301375128229408 21.05009451831215 37.580787801056076 26.06774255240237 3 17.653430629832137 24.391510111928902 29.71494511351591 28.24011414472305 4 13.10349809379302 17.069142203115657 35.430672528387255 34.39668717470408 5 14.103645404583046 37.08715032226112 34.71881093752398 14.090393335631857 6 33.6070074137893 35.83372662208687 16.708103894101342 13.851162070022491 7 28.490963596148163 31.880822015217237 21.314460865952835 18.31375352268177 8 26.128539568730346 35.17800155765163 20.01840588838726 18.675052985230753 9 26.263431101397096 15.30844283431326 19.70628412744155 38.721841936848094 10-11 25.28558609108911 25.40883534046318 28.411301636015367 20.89427693243234 12-13 25.713679418465002 22.972904190664316 27.891946857048545 23.421469533822137 14-15 23.05190424478172 24.804558367877338 25.02173133168665 27.12180605565429 16-17 23.30029467016945 27.647891322153445 25.989789183675494 23.06202482400161 18-19 23.25345349616195 27.032706695160424 27.246578316048698 22.467261492628925 20-21 23.81034361124995 26.294738484897877 27.075383094460488 22.819534809391687 22-23 23.696683085258037 26.051611338596114 26.71720613734206 23.53449943880379 24-25 23.491937551343494 26.28128093474628 26.796633925346796 23.43014758856343 26-27 23.315333037289378 26.431878732011167 26.831107670364222 23.421680560335236 28-29 23.462111534832506 26.58081785922677 26.66733162938197 23.289738976558755 30-31 23.721880395468858 26.297462579718417 26.487205281652248 23.493451743160477 32-33 23.471082423001562 26.375341783807354 26.359078395520363 23.794497397670725 34-35 23.87516611648525 26.397984500099092 26.429780800162593 23.297068583253065 36-37 23.870154003347857 26.180943407348632 26.476673999268304 23.47222859003521 38-39 23.662550978285317 26.289731437953478 26.51688584943474 23.53083173432646 40-41 23.857146840432183 26.17100752972677 26.469262333045705 23.502583296795343 42-43 23.719031278633153 26.16624895947492 26.31326991370379 23.80144984818814 44-45 23.653085533721402 26.147730962381853 26.45095549506743 23.74822800882931 46-47 23.7206484869648 26.197162223916408 26.23898669139831 23.843202597720484 48-49 23.533335217265755 26.246441192394478 26.329140835114806 23.891082755224964 50-51 23.600656612383116 26.243966831044325 26.373144763119523 23.782231793453036 52-53 23.776464692472686 26.130549356284217 26.28585030403356 23.80713564720954 54-55 23.370584494788844 26.06636268401486 26.51176351482093 24.051289306375363 56-57 23.38831033626418 26.20702096956175 26.349268373747805 24.05540032042627 58-59 23.4186993475196 26.04660659846843 26.46375760810713 24.070936445904838 60-61 23.379064479606253 26.06525624350853 26.583975072751258 23.971704204133957 62-63 23.35831822429653 26.111279249251663 26.499762578963313 24.030639947488496 64-65 23.163814943480038 26.051300502963358 26.380256923725803 24.4046276298308 66-67 23.13852146751515 26.158046718447896 26.282750079858836 24.42068173417812 68-69 23.268091843212982 26.068063310475313 26.29793532691796 24.365909519393742 70-71 23.157577975164347 25.917030477736336 26.261042135669914 24.664349411429402 72-73 23.145835466536433 26.064993262042073 26.19535342035367 24.593817851067826 74-75 23.129564810481984 26.173532990173136 26.079475900795508 24.61742629854937 76-77 23.13009396539128 25.911148432756608 26.245674003846247 24.713083598005863 78-79 23.076047134955903 25.98936528654374 26.220387776915615 24.714199801584737 80-81 23.155313771929432 26.11985966363014 26.069151015895702 24.65567554854473 82-83 23.081082730263986 26.1099467649322 26.124902223309515 24.684068281494294 84-85 23.04602524874199 26.149517231876047 26.041975392315216 24.762482127066747 86-87 22.982789259719077 26.250114694575366 25.970222479387743 24.79687356631781 88-89 22.81597351261867 26.093205100772927 26.014148375883572 25.076673010724836 90-91 22.693352538932537 26.02600827049562 26.14281480280193 25.137824387769907 92-93 22.776660961824742 25.878432383581064 26.25204616971446 25.092860484879736 94-95 22.65301512507914 25.806021173501325 26.23004141388489 25.310922287534645 96-97 22.60921090629579 25.686893268843676 26.224223897868626 25.47967192699191 98-99 22.479587028664053 25.734921235515746 26.133992626367302 25.651499109452896 100-101 22.371679296248924 25.81711791030392 26.131081309933595 25.680121483513553 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 51.0 2 46.5 3 58.0 4 61.0 5 70.0 6 110.5 7 219.0 8 339.0 9 374.5 10 340.0 11 324.5 12 332.0 13 334.0 14 373.5 15 411.5 16 447.5 17 496.0 18 578.5 19 681.0 20 811.5 21 935.0 22 1093.5 23 1387.0 24 1774.5 25 2326.5 26 3227.5 27 4614.5 28 6893.5 29 10289.0 30 14719.5 31 20118.5 32 27452.5 33 33307.0 34 37279.5 35 42643.0 36 50055.0 37 57613.0 38 64185.0 39 70676.0 40 76808.0 41 82877.0 42 88570.0 43 94362.5 44 100265.5 45 106813.0 46 111064.5 47 113579.0 48 116866.0 49 117768.0 50 116100.0 51 113852.0 52 111937.0 53 110435.5 54 107147.0 55 100490.5 56 92287.0 57 83075.5 58 74139.5 59 64487.5 60 52727.0 61 42928.5 62 35436.0 63 26983.5 64 19088.5 65 13922.0 66 10556.0 67 8130.5 68 6120.0 69 4627.5 70 3483.0 71 2497.5 72 1691.5 73 1213.5 74 931.5 75 633.5 76 402.0 77 243.0 78 123.5 79 79.0 80 52.5 81 27.5 82 16.0 83 14.5 84 12.5 85 7.5 86 4.0 87 3.0 88 4.0 89 3.0 90 1.5 91 0.5 92 0.5 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.167554213724625 2 7.485111178227608E-5 3 0.010292027870062961 4 0.006474621169166881 5 0.02582363356488525 6 0.0021706822416860064 7 3.742555589113804E-5 8 0.0 9 3.742555589113804E-5 10-11 0.05114202212524013 12-13 2.994044471291043E-4 14-15 0.005146013935031481 16-17 1.871277794556902E-5 18-19 0.0015344477915366598 20-21 4.678194486392255E-4 22-23 0.0 24-25 5.988088942582087E-4 26-27 0.002638501690325232 28-29 0.005314428936541602 30-31 0.017159617376086792 32-33 0.012200731220511001 34-35 0.010348166203899669 36-37 0.004247800593644167 38-39 0.0 40-41 0.0035367150317125447 42-43 0.009094410081546543 44-45 0.0070547172854795205 46-47 0.0033683000302024237 48-49 0.009524803974294631 50-51 0.002806916691835353 52-53 0.002320384465250558 54-55 0.004041960036242909 56-57 0.008140058406322523 58-59 0.014839232910836232 60-61 0.007335408954663056 62-63 0.020827321853418318 64-65 0.04118682425819741 66-67 0.06115335832611956 68-69 0.05069291545454648 70-71 0.06953668284573448 72-73 0.03403854308299005 74-75 0.026983825797510526 76-77 0.23411556487701402 78-79 0.0867337257777124 80-81 0.06792738394241554 82-83 0.026403729681197887 84-85 0.05174083101949834 86-87 0.06871332061612945 88-89 0.3016874060384638 90-91 0.30556095107319653 92-93 0.053612108814055245 94-95 0.010572719539246496 96-97 0.016149127367026065 98-99 6.736600060404847E-4 100-101 1.3098944561898315E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2671971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.27432210207753 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9476865062613 49.164136587047565 2 12.178490167795273 15.168144388525343 3 3.7490934254514197 7.004167547020286 4 1.6595150278796107 4.133806935176522 5 0.9088146217401666 2.8297907242662443 6 0.5536887611391108 2.068835535328635 7 0.39491896749569066 1.7215317690232566 8 0.27472973206835344 1.3686886260673679 9 0.2048885415211606 1.1483365526742275 >10 1.0719275978200946 11.530645319955516 >50 0.04343367261380416 1.8197709664009891 >100 0.011247661731444406 1.217097596095737 >500 0.0010836806418009002 0.472023422075289 >1k 4.816358407648822E-4 0.353024030343116 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 3.742555589113804E-5 4 0.0 0.0 0.0 0.0 3.742555589113804E-5 5 0.0 3.742555589113804E-5 0.0 0.0 3.742555589113804E-5 6 0.0 3.742555589113804E-5 0.0 0.0 3.742555589113804E-5 7 0.0 3.742555589113804E-5 0.0 0.0 3.742555589113804E-5 8 0.0 3.742555589113804E-5 0.0 0.0 7.485111178227608E-5 9 0.0 3.742555589113804E-5 0.0 0.0 1.4970222356455216E-4 10-11 0.0 3.742555589113804E-5 0.0 0.0 1.4970222356455216E-4 12-13 0.0 3.742555589113804E-5 0.0 0.0 1.6841500151012118E-4 14-15 0.0 3.742555589113804E-5 0.0 0.0 2.058405574012592E-4 16-17 0.0 3.742555589113804E-5 0.0 0.0 2.2455333534682824E-4 18-19 0.0 3.742555589113804E-5 0.0 0.0 2.2455333534682824E-4 20-21 0.0 3.742555589113804E-5 0.0 0.0 2.619788912379663E-4 22-23 0.0 3.742555589113804E-5 0.0 3.742555589113804E-5 3.5554278096581137E-4 24-25 0.0 3.742555589113804E-5 0.0 1.871277794556902E-4 4.1168111480251846E-4 26-27 0.0 3.742555589113804E-5 0.0 7.297983398771919E-4 4.303938927480875E-4 28-29 0.0 3.742555589113804E-5 0.0 0.003761268367059373 4.491066706936565E-4 30-31 0.0 3.742555589113804E-5 0.0 0.015681307918386837 4.491066706936565E-4 32-33 0.0 3.742555589113804E-5 0.0 0.050281234339743956 4.491066706936565E-4 34-35 0.0 3.742555589113804E-5 0.0 0.1006934581251069 4.865322265847945E-4 36-37 0.0 3.742555589113804E-5 0.0 0.17681703880768168 4.865322265847945E-4 38-39 0.0 3.742555589113804E-5 0.0 0.29616713654452087 5.052450045303636E-4 40-41 0.0 3.742555589113804E-5 0.0 0.42648292215746353 5.239577824759326E-4 42-43 0.0 3.742555589113804E-5 0.0 0.5653691600694768 5.239577824759326E-4 44-45 0.0 7.485111178227608E-5 0.0 0.7469205316973875 5.426705604215016E-4 46-47 0.0 1.1227666767341412E-4 0.0 0.959909370273854 5.800961163126396E-4 48-49 0.0 1.1227666767341412E-4 0.0 1.168800110480241 6.362344501493467E-4 50-51 0.0 1.1227666767341412E-4 0.0 1.381077863494776 6.362344501493467E-4 52-53 0.0 1.1227666767341412E-4 0.0 1.593355616509311 6.923727839860537E-4 54-55 0.0 1.1227666767341412E-4 0.0 1.8517042288258367 7.859366737138988E-4 56-57 0.0 1.1227666767341412E-4 0.0 2.1471415670304808 8.046494516594678E-4 58-59 0.0 1.1227666767341412E-4 0.0 2.4525153903242214 8.233622296050369E-4 60-61 0.0 1.1227666767341412E-4 0.0 2.7643638347871287 8.233622296050369E-4 62-63 0.0 1.1227666767341412E-4 0.0 3.085063423218291 8.60787785496175E-4 64-65 0.0 1.4970222356455216E-4 0.0 3.4414295664137073 8.79500563441744E-4 66-67 0.0 1.4970222356455216E-4 0.0 3.8678002119034973 9.16926119332882E-4 68-69 0.0 1.871277794556902E-4 0.0 4.310394835872096 9.35638897278451E-4 70-71 0.0 1.871277794556902E-4 0.0 4.770186502772672 9.35638897278451E-4 72-73 0.0 1.871277794556902E-4 0.0 5.245004530363541 0.0010292027870062962 74-75 0.0 1.871277794556902E-4 0.0 5.756892571064581 0.0010666283428974342 76-77 0.0 1.871277794556902E-4 0.0 6.330308225650652 0.0010853411208430032 78-79 0.0 1.871277794556902E-4 0.0 6.968601081374011 0.0010853411208430032 80-81 0.0 1.871277794556902E-4 0.0 7.615838644955353 0.0011040538987885722 82-83 0.0 1.871277794556902E-4 0.0 8.280553943137855 0.0011976177885164173 84-85 0.0 1.871277794556902E-4 0.0 8.989899216720541 0.0011976177885164173 86-87 0.0 1.871277794556902E-4 0.0 9.743444071810659 0.0012163305664619863 88-89 0.0 1.871277794556902E-4 0.0 10.559845148019946 0.0012350433444075553 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2355 0.0 46.0249 1 GTATCAA 3935 0.0 39.50499 1 TCAACGC 4780 0.0 31.872055 4 CAACGCA 4855 0.0 31.605383 5 ATCAACG 4895 0.0 31.123856 3 TATCAAC 5075 0.0 30.394035 2 AACGCAG 5310 0.0 28.980146 6 GTACATG 6220 0.0 23.84587 1 ACGCAGA 6220 0.0 23.82309 7 CGCAGAG 6380 0.0 22.630114 8 TACATGG 6675 0.0 21.259888 2 ACATGGG 6630 0.0 20.831497 3 CCCTATA 390 0.0 20.688326 2 GCAGAGT 7230 0.0 19.313417 9 CATGGGG 5525 0.0 18.726522 4 AGAGTAC 6095 0.0 18.390282 10-11 GAGTACA 5230 0.0 17.452131 1 CAGAGTA 6735 0.0 16.889547 10-11 GAGTACT 3415 0.0 16.536068 12-13 AGTACAT 5395 0.0 15.483255 2 >>END_MODULE