##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921677_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3112027 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.75876848112179 31.0 30.0 34.0 25.0 34.0 2 29.81610570859443 31.0 30.0 34.0 25.0 34.0 3 29.87126043572244 31.0 30.0 34.0 25.0 34.0 4 33.31218238145106 37.0 35.0 37.0 27.0 37.0 5 33.2976564792015 37.0 35.0 37.0 27.0 37.0 6 33.3343033334865 37.0 35.0 37.0 27.0 37.0 7 33.22945045142603 37.0 35.0 37.0 26.0 37.0 8 33.193367538263644 37.0 35.0 37.0 26.0 37.0 9 34.685508191284974 39.0 35.0 39.0 27.0 39.0 10-11 34.56670330945072 39.0 35.0 39.0 27.0 39.0 12-13 34.446897150956595 39.0 35.0 39.0 26.0 39.0 14-15 35.506938243145065 40.0 36.0 41.0 25.5 41.0 16-17 35.439236549040224 40.0 36.0 41.0 25.0 41.0 18-19 35.40089015937201 40.0 36.0 41.0 25.0 41.0 20-21 35.316776011262114 40.0 36.0 41.0 25.0 41.0 22-23 35.21058927187971 40.0 35.5 41.0 24.0 41.0 24-25 35.09404079720388 39.5 35.0 41.0 24.0 41.0 26-27 34.94002285327216 39.0 35.0 41.0 22.5 41.0 28-29 34.79558676708139 39.0 35.0 41.0 22.0 41.0 30-31 34.644157971637135 39.0 34.5 41.0 20.5 41.0 32-33 34.46033437370563 39.0 34.0 41.0 18.5 41.0 34-35 34.283840885699256 39.0 34.0 41.0 18.0 41.0 36-37 34.244965419644494 39.0 34.0 40.5 17.0 41.0 38-39 34.418109161649305 39.0 34.5 41.0 18.0 41.0 40-41 34.47977443640431 39.0 35.0 41.0 17.0 41.0 42-43 34.324377166393475 39.0 34.0 41.0 15.0 41.0 44-45 34.20102990751687 39.0 34.0 41.0 14.0 41.0 46-47 34.037198745383634 39.0 34.0 41.0 10.5 41.0 48-49 33.86906942002753 39.0 34.0 41.0 8.5 41.0 50-51 32.21173113215278 37.0 32.0 39.5 6.5 40.0 52-53 32.32281789328948 37.5 32.0 39.5 4.0 40.0 54-55 33.22217914561796 38.0 33.0 40.0 2.0 41.0 56-57 33.252268055514946 38.0 33.0 40.0 2.0 41.0 58-59 33.068528647084364 38.0 33.0 40.0 2.0 41.0 60-61 32.82283283531923 37.5 33.0 40.0 2.0 41.0 62-63 32.54202919833279 37.0 32.0 40.0 2.0 41.0 64-65 32.25867047426003 36.5 32.0 40.0 2.0 41.0 66-67 31.922885951824966 36.0 32.0 39.0 2.0 41.0 68-69 31.567579747862084 35.5 31.5 39.0 2.0 41.0 70-71 31.162300327085852 35.0 31.0 38.5 2.0 40.5 72-73 30.809551620214094 35.0 31.0 37.5 2.0 40.0 74-75 30.413379768234655 35.0 31.0 37.0 2.0 39.0 76-77 30.043854375299443 35.0 30.0 36.5 2.0 39.0 78-79 29.699639334748703 35.0 30.0 36.0 2.0 38.5 80-81 29.383787319325954 35.0 30.0 35.5 2.0 37.0 82-83 29.068157024344583 35.0 30.0 35.0 2.0 37.0 84-85 28.802494965499978 34.0 29.0 35.0 2.0 36.5 86-87 28.567338104714388 34.0 29.0 35.0 2.0 36.0 88-89 28.340366262889106 34.0 29.0 35.0 2.0 36.0 90-91 28.11326797614545 34.0 29.0 35.0 2.0 35.5 92-93 27.918055498875813 34.0 29.0 35.0 2.0 35.0 94-95 27.68239912442919 34.0 29.0 35.0 2.0 35.0 96-97 27.439897211688717 34.0 28.5 35.0 2.0 35.0 98-99 27.15294902647053 34.0 27.0 35.0 2.0 35.0 100-101 26.08206130602337 33.0 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 143458.0 3 23174.0 4 15497.0 5 11559.0 6 10551.0 7 10598.0 8 11132.0 9 11723.0 10 12977.0 11 13637.0 12 13473.0 13 13548.0 14 14033.0 15 14859.0 16 15072.0 17 15719.0 18 15009.0 19 14508.0 20 14434.0 21 15037.0 22 16907.0 23 19205.0 24 22578.0 25 26655.0 26 31440.0 27 36861.0 28 43277.0 29 50628.0 30 60361.0 31 72572.0 32 89948.0 33 114991.0 34 156204.0 35 222908.0 36 362376.0 37 624425.0 38 638328.0 39 112350.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.294161446591914 17.90364541471463 12.53042989582141 25.27176324287204 2 15.950939578712187 19.21546029677812 39.56176574812898 25.271834376380713 3 19.07039723670371 23.408723534997325 29.395040176416735 28.125839051882224 4 13.015594030434341 15.380326363352228 36.74931862936138 34.85476097685205 5 14.022989392751162 37.19260473247476 34.79064437372731 13.99376150104677 6 34.016184685768934 35.365219154631205 16.814693671351446 13.803902488248413 7 29.08492447001747 31.50412069371117 21.1269914115256 18.283963424745757 8 26.447307569068357 35.21415103041312 19.790012530857116 18.54852886966141 9 26.699219911145388 15.117752444305191 19.2409598868831 38.94206775766632 10-11 25.71272750879119 24.989410721941304 28.18555693175106 21.112304837516447 12-13 26.10355013372883 22.52633798337594 27.784083577025736 23.586028305869494 14-15 23.19158521819789 24.157474665372686 24.858208219945183 27.792731896484245 16-17 23.612188760970866 27.209296495171948 25.71186496245493 23.466649781402253 18-19 23.626987929814955 26.660265056237442 26.821960351792917 22.89078666215469 20-21 24.192195666759066 25.884079979751963 26.738627552598697 23.18509680089027 22-23 23.96471378246123 25.8121998660839 26.39666039088972 23.82642596056515 24-25 23.758964017602814 25.96834855388793 26.498519196285287 23.774168232223968 26-27 23.635620028813698 26.108825138785434 26.426113276557654 23.82944155584321 28-29 23.79397397944599 26.284207875839726 26.282665288622088 23.6391528560922 30-31 23.965196644614085 26.039511462392667 26.176705379197045 23.8185865137962 32-33 23.70289898968637 26.111104773140188 26.12482692652847 24.06116931064497 34-35 24.11643046326545 26.11028238362449 26.16942696118663 23.60386019192343 36-37 24.187811765998788 25.87149878559175 26.22014810687435 23.72054134153511 38-39 23.950679093565018 26.03504508732672 26.194673970658815 23.819601848449448 40-41 24.07870133383976 25.932561544964916 26.263233882595493 23.725503238599828 42-43 23.93354915921947 25.84305108065387 26.186773987011797 24.03662577311486 44-45 23.891849287800518 25.942989590961606 26.2650050798374 23.900156041400475 46-47 24.056729833617645 25.954797217279758 26.060520881027312 23.927952068075285 48-49 23.81154172496349 26.06248883035503 26.05976786458929 24.06620158009219 50-51 23.894159917649812 26.082303177868482 26.159739915595566 23.863796988886136 52-53 24.115647118280965 25.939536636780762 26.121308947399857 23.82350729753841 54-55 23.609466493456562 25.841577798281495 26.453555344507844 24.095400363754095 56-57 23.720889645658996 25.99050230615959 26.29411552565111 23.994492522530297 58-59 23.788099670596388 25.827478038417436 26.386391821232607 23.998030469753573 60-61 23.735869886211947 25.8982551296085 26.488852905761025 23.877022078418527 62-63 23.767447356863087 25.894939767415803 26.44890180021561 23.8887110755055 64-65 23.57546295863986 25.798028286111997 26.403510664365893 24.222998090882246 66-67 23.589726829832163 25.88302513940892 26.31669527802334 24.210552752735573 68-69 23.75759236366265 25.71788677085015 26.416716666647883 24.107804198839315 70-71 23.67048406779792 25.549763874667246 26.40199466627346 24.377757391261376 72-73 23.580240970760656 25.69926002892396 26.3209175171244 24.399581483190985 74-75 23.556543467302987 25.853674400079463 26.302613639052918 24.28716849356463 76-77 23.61009178668759 25.539146377527146 26.427167326984986 24.42359450880028 78-79 23.529069853563907 25.543926640909238 26.48160516161941 24.44539834390745 80-81 23.672536339038434 25.6420995813726 26.319484668176152 24.36587941141281 82-83 23.61991967385175 25.67792699151168 26.398662712300542 24.303490622336028 84-85 23.564825966712053 25.69177603994245 26.420746937140372 24.32265105620513 86-87 23.56982084269833 25.67870861927576 26.379674204402047 24.371796333623866 88-89 23.449389011974343 25.557338764767433 26.424648352968493 24.568623870289727 90-91 23.38773005739759 25.54530930923193 26.498151166311285 24.568809467059193 92-93 23.532682765161123 25.338066612138626 26.679768856500587 24.449481766199668 94-95 23.392941318191138 25.181889466668533 26.794331113635238 24.630838101505088 96-97 23.45305616793301 25.07310412449637 26.76965452462831 24.704185182942307 98-99 23.332023493375377 25.030783923110246 26.76806653128075 24.869126052233625 100-101 23.47728107666635 24.87363791228233 26.85925768685588 24.78982332419544 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 15.5 2 32.5 3 65.0 4 66.5 5 66.0 6 93.5 7 192.5 8 332.0 9 399.0 10 396.5 11 413.5 12 471.0 13 537.0 14 641.0 15 721.0 16 800.0 17 917.5 18 1017.5 19 1124.0 20 1239.0 21 1356.0 22 1504.5 23 1736.5 24 2063.0 25 2594.0 26 3449.5 27 4858.5 28 7128.0 29 10289.0 30 14654.0 31 20781.5 32 29043.0 33 35442.5 34 40363.5 35 47238.5 36 56172.0 37 65006.5 38 73024.0 39 81263.5 40 88586.0 41 94850.0 42 100818.5 43 107965.5 44 114387.5 45 120776.0 46 125880.5 47 129136.5 48 133002.0 49 134884.5 50 133487.0 51 131751.0 52 130716.0 53 129303.5 54 126503.5 55 120143.0 56 110572.0 57 100332.0 58 91199.0 59 79853.5 60 66097.0 61 54780.5 62 45321.0 63 34781.0 64 25046.0 65 18376.0 66 13793.0 67 10699.0 68 8207.5 69 6110.0 70 4632.5 71 3446.0 72 2417.0 73 1723.0 74 1309.5 75 934.0 76 677.5 77 491.0 78 338.5 79 221.0 80 162.0 81 141.5 82 107.5 83 82.0 84 64.5 85 61.0 86 56.0 87 44.0 88 35.5 89 37.0 90 32.5 91 19.0 92 17.5 93 18.5 94 19.5 95 18.5 96 12.5 97 8.5 98 7.5 99 6.0 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05138130228304575 2 0.07162534258218196 3 0.06805853548185796 4 0.06809066887915818 5 0.063752660243629 6 0.010282687136069193 7 0.013335359879589734 8 0.016323765828509845 9 0.006490946254643678 10-11 0.012499891549784111 12-13 0.022284511027699953 14-15 0.03905814441841282 16-17 0.026767119951080113 18-19 0.00996135316306703 20-21 0.01974597264098287 22-23 0.036117938565443035 24-25 0.0336597336719765 26-27 0.021191975519492603 28-29 0.011937557097030328 30-31 0.011985757192980652 32-33 0.00869208396970849 34-35 0.005173476965334813 36-37 5.62334452753784E-4 38-39 0.003904207771976272 40-41 0.0010925355082073518 42-43 0.22670111795302544 44-45 0.19667245817597342 46-47 0.20208693562105987 48-49 0.20925268321900806 50-51 0.20134786748315486 52-53 0.20865821536895407 54-55 0.20428807333612467 56-57 0.20664987803769053 58-59 0.21587216306285262 60-61 0.22069217265788502 62-63 0.2056216093240836 64-65 0.2057822763105847 66-67 0.20325980462251775 68-69 0.198986062781589 70-71 0.19098484685383513 72-73 0.2023600694981117 74-75 0.20120326719530388 76-77 0.19522645529746369 78-79 0.2135264250599368 80-81 0.22488558100556325 82-83 0.22287724367429973 84-85 0.2171896323521615 86-87 0.23717660547289596 88-89 0.22936818992894342 90-91 0.23672673791069293 92-93 0.23144079405480736 94-95 0.23539320192273397 96-97 0.24263928301393273 98-99 0.2352807350321832 100-101 0.2427838833017837 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3112027.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.44394773568516 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71594819478402 49.77778502775679 2 11.52744911564029 14.396388602056245 3 3.6502168504095502 6.838018506926737 4 1.676267263142146 4.186909814827526 5 0.9420962663178345 2.9414105007967493 6 0.551511255298125 2.0663124000886937 7 0.3603818220129004 1.575256456106518 8 0.27252572954886967 1.361406593006327 9 0.20823130706694107 1.1702506369879329 >10 1.0324014844334084 11.30804309341741 >50 0.04787686928056539 1.9989476806222355 >100 0.013494197513359323 1.4134492255573836 >500 8.77224432281867E-4 0.39053033045066937 >1k 7.224201196744959E-4 0.5752911313987642 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.2133397300216223E-5 2 0.0 0.0 0.0 0.0 3.2133397300216223E-5 3 0.0 0.0 0.0 0.0 3.2133397300216223E-5 4 0.0 0.0 0.0 0.0 3.2133397300216223E-5 5 0.0 3.2133397300216223E-5 0.0 0.0 3.2133397300216223E-5 6 0.0 3.2133397300216223E-5 0.0 0.0 6.426679460043245E-5 7 0.0 6.426679460043245E-5 0.0 0.0 6.426679460043245E-5 8 0.0 6.426679460043245E-5 0.0 3.2133397300216223E-5 6.426679460043245E-5 9 0.0 6.426679460043245E-5 0.0 6.426679460043245E-5 1.6066698650108114E-4 10-11 0.0 6.426679460043245E-5 0.0 1.4460028785097303E-4 1.6066698650108114E-4 12-13 0.0 8.033349325054057E-5 0.0 1.6066698650108114E-4 1.6066698650108114E-4 14-15 0.0 9.640019190064868E-5 0.0 1.6066698650108114E-4 2.0886708245140546E-4 16-17 0.0 9.640019190064868E-5 0.0 1.6066698650108114E-4 2.2493378110151357E-4 18-19 0.0 9.640019190064868E-5 0.0 1.9280038380129735E-4 3.213339730021623E-4 20-21 3.2133397300216223E-5 1.285335892008649E-4 0.0 1.9280038380129735E-4 3.213339730021623E-4 22-23 3.2133397300216223E-5 1.285335892008649E-4 0.0 2.0886708245140546E-4 3.374006716522704E-4 24-25 3.2133397300216223E-5 1.285335892008649E-4 0.0 2.89200575701946E-4 4.177341649028109E-4 26-27 3.2133397300216223E-5 1.285335892008649E-4 0.0 4.820009595032434E-4 4.177341649028109E-4 28-29 3.2133397300216223E-5 1.285335892008649E-4 0.0 0.001976203933963298 4.177341649028109E-4 30-31 3.2133397300216223E-5 1.285335892008649E-4 0.0 0.010073820053617786 4.177341649028109E-4 32-33 3.2133397300216223E-5 1.285335892008649E-4 0.0 0.02953059211889871 4.4986756220302714E-4 34-35 4.820009595032434E-5 1.285335892008649E-4 0.0 0.057084980303834125 4.8200095950324336E-4 36-37 6.426679460043245E-5 1.4460028785097303E-4 0.0 0.10091493422132905 4.8200095950324336E-4 38-39 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.17795475424859747 4.8200095950324336E-4 40-41 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.2641686592050776 5.302010554535676E-4 42-43 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.35600590868909554 5.462677541036758E-4 44-45 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.4677979978965478 5.62334452753784E-4 46-47 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.5980507238529743 6.266012473542164E-4 48-49 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.737573934930513 7.230014392548651E-4 50-51 6.426679460043245E-5 1.6066698650108114E-4 0.0 0.8835077587694451 7.390681379049732E-4 52-53 6.426679460043245E-5 1.6066698650108114E-4 0.0 1.0354023278075672 7.390681379049732E-4 54-55 6.426679460043245E-5 1.6066698650108114E-4 0.0 1.2086977394476333 7.390681379049732E-4 56-57 6.426679460043245E-5 1.6066698650108114E-4 0.0 1.4076838022292222 7.390681379049732E-4 58-59 6.426679460043245E-5 2.2493378110151357E-4 0.0 1.6192018899578957 7.390681379049732E-4 60-61 6.426679460043245E-5 2.570671784017298E-4 0.0 1.8438143370864069 7.390681379049732E-4 62-63 6.426679460043245E-5 2.570671784017298E-4 0.0 2.069535386421776 7.390681379049732E-4 64-65 6.426679460043245E-5 2.570671784017298E-4 0.0 2.3196617510066586 7.551348365550813E-4 66-67 6.426679460043245E-5 3.534673703023785E-4 0.0 2.604829585347428 7.712015352051894E-4 68-69 6.426679460043245E-5 3.534673703023785E-4 0.0 2.9175839412704327 7.872682338552976E-4 70-71 6.426679460043245E-5 3.534673703023785E-4 0.0 3.254840012634852 8.033349325054056E-4 72-73 6.426679460043245E-5 3.534673703023785E-4 0.0 3.606491845989768 9.318685217062705E-4 74-75 6.426679460043245E-5 3.534673703023785E-4 0.0 3.966578696135991 9.640019190064867E-4 76-77 6.426679460043245E-5 3.534673703023785E-4 0.0 4.369402964691502 9.640019190064867E-4 78-79 6.426679460043245E-5 3.534673703023785E-4 0.0 4.814273783614345 9.96135316306703E-4 80-81 6.426679460043245E-5 3.856007676025947E-4 0.0 5.285847455693668 0.0010122020149568112 82-83 6.426679460043245E-5 3.856007676025947E-4 0.0 5.769631818747074 0.0010282687136069191 84-85 6.426679460043245E-5 3.856007676025947E-4 0.0 6.274993758087574 0.0010282687136069191 86-87 6.426679460043245E-5 4.177341649028109E-4 0.0 6.815124033306909 0.0010443354122570273 88-89 6.426679460043245E-5 4.177341649028109E-4 0.0 7.397316925592227 0.0010604021109071355 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2240 0.0 44.280033 1 GTATCAA 3935 0.0 42.57353 1 TCAACGC 4545 0.0 36.025978 4 CAACGCA 4635 0.0 35.118835 5 ATCAACG 4875 0.0 33.685196 3 AACGCAG 5075 0.0 32.431923 6 TATCAAC 5085 0.0 32.295105 2 GTACATG 7645 0.0 28.555515 1 ACGCAGA 5770 0.0 27.95363 7 TACATGG 7845 0.0 27.406704 2 CGCAGAG 6055 0.0 26.640892 8 ACATGGG 8030 0.0 25.828756 3 CATGGGG 6955 0.0 23.064827 4 GCAGAGT 7335 0.0 20.310167 9 GAGTACA 5500 0.0 19.069498 1 AGAGTAC 5810 0.0 18.741657 10-11 ATGGGGG 4205 0.0 17.831455 5 TAAGGTG 1500 0.0 17.400717 5 CAGAGTA 6700 0.0 16.818617 10-11 TCTATAC 905 0.0 16.781818 3 >>END_MODULE