##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921676_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3345219 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.095597627539483 31.0 31.0 34.0 26.0 34.0 2 30.151010741000814 31.0 31.0 34.0 26.0 34.0 3 30.207644402354525 31.0 31.0 34.0 26.0 34.0 4 33.657087622663866 37.0 35.0 37.0 28.0 37.0 5 33.64968362310509 37.0 35.0 37.0 28.0 37.0 6 33.68733825797354 37.0 35.0 37.0 28.0 37.0 7 33.59180878740674 37.0 35.0 37.0 28.0 37.0 8 33.55017055684546 37.0 35.0 37.0 28.0 37.0 9 35.06983937374504 39.0 35.0 39.0 28.0 39.0 10-11 34.95830721396716 39.0 35.0 39.0 27.0 39.0 12-13 34.84330338312678 39.0 35.0 39.0 27.0 39.0 14-15 35.95186428751002 40.0 36.0 41.0 27.0 41.0 16-17 35.88635990648146 40.0 36.0 41.0 27.0 41.0 18-19 35.847393698290006 40.0 36.0 41.0 27.0 41.0 20-21 35.763745662092674 40.0 36.0 41.0 27.0 41.0 22-23 35.659361165890786 40.0 36.0 41.0 26.5 41.0 24-25 35.55195130722383 40.0 36.0 41.0 25.5 41.0 26-27 35.40161227112485 40.0 36.0 41.0 25.0 41.0 28-29 35.26108230881147 40.0 35.0 41.0 24.5 41.0 30-31 35.11009383840042 39.0 35.0 41.0 24.0 41.0 32-33 34.931541552287015 39.0 35.0 41.0 24.0 41.0 34-35 34.758018533315756 39.0 35.0 41.0 23.0 41.0 36-37 34.729311294716425 39.0 35.0 41.0 22.5 41.0 38-39 34.91213609632135 39.0 35.0 41.0 23.0 41.0 40-41 34.9737446188127 40.0 35.0 41.0 23.0 41.0 42-43 34.815543915062065 40.0 35.0 41.0 21.5 41.0 44-45 34.69428040436217 39.5 35.0 41.0 20.5 41.0 46-47 34.53270533259557 39.0 35.0 41.0 18.5 41.0 48-49 34.368217745983145 39.0 34.0 41.0 16.5 41.0 50-51 32.696587727141335 37.0 32.0 39.5 13.5 40.0 52-53 32.816305300191104 37.5 32.5 39.5 13.0 40.0 54-55 33.71758485767299 38.5 33.5 40.0 13.0 41.0 56-57 33.733230021711584 38.0 34.0 41.0 11.0 41.0 58-59 33.54278972467871 38.0 34.0 40.5 8.5 41.0 60-61 33.28922127370435 37.5 33.0 40.0 7.5 41.0 62-63 32.99236462545501 37.0 33.0 40.0 6.0 41.0 64-65 32.69960935293025 36.5 33.0 40.0 2.0 41.0 66-67 32.35829268577035 36.0 32.5 39.0 2.0 41.0 68-69 31.992731865985455 35.5 32.0 39.0 2.0 41.0 70-71 31.581440856338553 35.0 32.0 38.5 2.0 40.5 72-73 31.220467329642695 35.0 32.0 37.5 2.0 40.0 74-75 30.827075746012444 35.0 31.0 37.0 2.0 39.0 76-77 30.451021891242398 35.0 31.0 36.5 2.0 39.0 78-79 30.11258754658514 35.0 31.0 36.0 2.0 38.5 80-81 29.80670682547241 35.0 31.0 35.5 2.0 37.0 82-83 29.50167761811708 35.0 30.0 35.0 2.0 37.0 84-85 29.241474623933442 35.0 30.0 35.0 2.0 36.0 86-87 29.006603454063843 34.5 30.0 35.0 2.0 36.0 88-89 28.788831463650062 34.0 30.0 35.0 2.0 36.0 90-91 28.56739050567392 34.0 30.0 35.0 2.0 35.0 92-93 28.373608723375064 34.0 29.0 35.0 2.0 35.0 94-95 28.143749631937403 34.0 29.0 35.0 2.0 35.0 96-97 27.898185141241875 34.0 29.0 35.0 2.0 35.0 98-99 27.622284520086726 34.0 29.0 35.0 2.0 35.0 100-101 26.556499589414024 33.0 26.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 132969.0 3 22840.0 4 15023.0 5 11334.0 6 10294.0 7 10443.0 8 11078.0 9 11766.0 10 12865.0 11 13716.0 12 13770.0 13 13734.0 14 14301.0 15 14895.0 16 15100.0 17 15624.0 18 15048.0 19 14520.0 20 14710.0 21 15661.0 22 17100.0 23 19770.0 24 23279.0 25 27194.0 26 32305.0 27 37983.0 28 44588.0 29 52150.0 30 62419.0 31 75328.0 32 93282.0 33 120329.0 34 165186.0 35 238024.0 36 395798.0 37 704408.0 38 714670.0 39 121703.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.708966301928 17.497854669044752 12.51966989570506 25.273509133322186 2 15.994464179616191 19.195451197483152 39.41911581244985 25.390968810450804 3 19.246547618940777 23.22600370419898 29.147905595877337 28.37954308098291 4 13.32984315121563 15.156385088745358 36.148244986851985 35.36552677318702 5 14.279705749233514 37.1337383554157 34.32527746425744 14.261278431093347 6 34.36032920870743 34.87894443698692 16.634074458521393 14.12665189578426 7 29.48325523074099 31.520809053961045 20.671554730912302 18.32438098438566 8 26.82993481213679 35.026808557330966 19.599353114429917 18.543903516102326 9 26.968843320337804 15.272689332755753 18.891048332778773 38.86741901412766 10-11 25.979459700091827 24.930634669047283 27.774265682708677 21.31563994815221 12-13 26.32153823682476 22.321809135288216 27.627965512173763 23.728687115713264 14-15 23.43940135694738 23.929617812394113 24.5582085686798 28.072772261978706 16-17 23.843324217275935 27.0982231761556 25.42388769846562 23.634564908102845 18-19 23.952839549651873 26.499015360495846 26.57105085116681 22.977094238685467 20-21 24.37450254713805 25.679017550406062 26.48551160130338 23.46096830115251 22-23 24.26196617727824 25.504902830811183 26.226402991325642 24.00672800058494 24-25 24.05850026898497 25.711957914542623 26.16793154893179 24.06161026754062 26-27 23.846316914964422 25.903003313493834 26.22928468359752 24.021395087944228 28-29 24.085160540779956 26.098368664168987 26.034748196137 23.781722598914058 30-31 24.280269634112837 25.838211759106372 25.873490094710373 24.008028512070425 32-33 23.927397746594668 25.95640426764327 25.902920458155048 24.21327752760702 34-35 24.318552175799024 25.908933417079044 25.98192192815228 23.790592478969653 36-37 24.361348030852053 25.819157384310397 25.95423190398275 23.865262680854798 38-39 24.222786136089386 25.91279384444019 25.938966662466463 23.925453357003963 40-41 24.331081133597234 25.74289110222667 25.98117467133249 23.9448530928436 42-43 24.11641879014363 25.722875600389354 25.916504397923664 24.244201211543356 44-45 24.081163704290713 25.8026632701677 26.022023823520644 24.094149202020944 46-47 24.284862655344973 25.803000777380188 25.798447336611613 24.11368923066323 48-49 23.97724188303615 25.869861942558853 25.89628585278227 24.256610321622727 50-51 24.06970543917512 25.884551208888652 25.964714411103024 24.081028940833207 52-53 24.289973968982675 25.759996956207438 25.94819680755292 24.00183226725697 54-55 23.79429688925317 25.5905128497789 26.21936368677378 24.395826574194153 56-57 23.860265370869122 25.75439563567078 26.080791618858168 24.304547374601928 58-59 23.989481841525635 25.676833430881818 26.100828530437447 24.2328561971551 60-61 24.014046473512675 25.585495697743145 26.213961529501567 24.18649629924262 62-63 24.018708737609582 25.619361820843988 26.265015484513615 24.096913957032815 64-65 23.793703947360537 25.478411205657952 26.252970316606095 24.47491453037542 66-67 23.811216380008133 25.670512546291054 26.094299242866786 24.42397183083402 68-69 23.919608948554973 25.549624028167784 26.148330189001406 24.382436834275833 70-71 23.85950928863836 25.35107401706314 26.176569345711197 24.6128473485873 72-73 23.781926462041735 25.528467949217227 26.11085814255843 24.578747446182607 74-75 23.670060116302338 25.64196350364089 26.159548450720088 24.528427929336683 76-77 23.71077740143287 25.24518125837322 26.330372581455624 24.713668758738287 78-79 23.655046426781855 25.25416200726081 26.33733624045306 24.753455325504284 80-81 23.7740421025286 25.445852243385232 26.144629630156764 24.635476023929403 82-83 23.6782052787892 25.478766308946522 26.24697671742825 24.596051694836028 84-85 23.665857609783707 25.425833472903385 26.290623499122585 24.617685418190327 86-87 23.65038321596341 25.50097671336141 26.210425577918084 24.6382144927571 88-89 23.576470320311312 25.196507917625116 26.340668460282572 24.886353301780993 90-91 23.537215572087785 25.207541481700463 26.385416649497966 24.869826296713786 92-93 23.591477071905445 25.127852761324483 26.51297615817379 24.767694008596283 94-95 23.52091353198926 24.9275552542893 26.608078570559535 24.943452643161905 96-97 23.44984085774536 24.827810043441392 26.639818544414407 25.08253055439884 98-99 23.405252833517828 24.7575679843501 26.652178681685264 25.185000500446808 100-101 23.51351501195985 24.611756300479847 26.751492714778678 25.12323597278162 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 27.5 2 42.0 3 71.0 4 71.0 5 77.5 6 128.0 7 283.0 8 471.0 9 540.5 10 516.0 11 503.0 12 559.0 13 645.0 14 755.0 15 873.5 16 954.0 17 1068.5 18 1174.0 19 1306.5 20 1397.0 21 1445.5 22 1610.5 23 1821.0 24 2077.0 25 2494.0 26 3150.0 27 4197.5 28 6038.5 29 8808.0 30 12682.0 31 18275.5 32 26021.5 33 32256.5 34 37032.0 35 43912.5 36 53321.0 37 62816.0 38 71578.5 39 80144.5 40 88060.0 41 95777.5 42 103479.0 43 112685.5 44 122170.5 45 131721.0 46 137882.0 47 142108.0 48 147636.0 49 149669.0 50 149443.0 51 148543.5 52 146592.0 53 145743.5 54 144059.5 55 137327.0 56 126575.5 57 113938.5 58 103288.5 59 91912.5 60 75620.5 61 60866.0 62 49469.5 63 37748.5 64 27004.0 65 19531.0 66 14444.5 67 10964.0 68 8243.5 69 6042.5 70 4431.0 71 3128.0 72 2189.5 73 1562.0 74 1107.5 75 779.0 76 532.0 77 359.0 78 252.0 79 178.0 80 133.5 81 114.0 82 105.5 83 89.0 84 71.0 85 61.0 86 50.5 87 43.5 88 46.5 89 44.5 90 41.0 91 31.0 92 29.5 93 28.0 94 20.5 95 18.0 96 11.5 97 13.5 98 15.5 99 11.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05715619814427696 2 0.07847019881209572 3 0.07551075131403953 4 0.07500256335982787 5 0.07042887177192285 6 0.010462693174946094 7 0.014139582490712866 8 0.017278390443196692 9 0.006636336813822951 10-11 0.012809325787041146 12-13 0.023690526688985088 14-15 0.041551838609071634 16-17 0.02801012429978426 18-19 0.010163759084233349 20-21 0.02035741157753797 22-23 0.03836819054298089 24-25 0.034855714977106135 26-27 0.021314000667818758 28-29 0.011464122378833793 30-31 0.011658429537797077 32-33 0.008414994653563787 34-35 0.005141666360259224 36-37 8.51962158531325E-4 38-39 0.004349491019870448 40-41 0.0013452034082073552 42-43 0.236322345412961 44-45 0.20565170770583333 46-47 0.21176490986090898 48-49 0.21920836871965632 50-51 0.21012077236198887 52-53 0.2175642312207362 54-55 0.21361830122332798 56-57 0.21669732235766928 58-59 0.22606890610151384 60-61 0.23097142518920286 62-63 0.21542685247214008 64-65 0.21496350463153535 66-67 0.2122730978151206 68-69 0.2073705787274316 70-71 0.19962818577797148 72-73 0.21161544281555256 74-75 0.20994141190756122 76-77 0.2039178899796994 78-79 0.22230233655853326 80-81 0.23372161882376014 82-83 0.23277997643801496 84-85 0.2268311880328313 86-87 0.246994292451406 88-89 0.23952094018358738 90-91 0.2461871704064816 92-93 0.24152379859136278 94-95 0.24491670052095246 96-97 0.2518370247209525 98-99 0.24515584779352265 100-101 0.2519864917663089 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3345219.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.6423532817819 #Duplication Level Percentage of deduplicated Percentage of total 1 77.9990155751069 44.96046811411521 2 11.80629272858157 13.610849928180633 3 4.051019859189829 7.005309536248035 4 1.89530557235182 4.369994935137338 5 1.0878999634705384 3.13545570148032 6 0.680231250143645 2.3526078020452883 7 0.4624862465696991 1.866115692891512 8 0.32798563987480867 1.5124691300012012 9 0.2412269166010663 1.2514398433014244 >10 1.3537301632798502 13.751947976296572 >50 0.06623590401727662 2.582886362187458 >100 0.026539261867036222 2.573687799515679 >500 0.0014060208107926184 0.5741683512370833 >1k 6.248981351909262E-4 0.452598827362323 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.9893409071274555E-5 0.0 4 0.0 0.0 0.0 2.9893409071274555E-5 0.0 5 0.0 2.9893409071274555E-5 0.0 2.9893409071274555E-5 0.0 6 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 7 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 8 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 9 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 10-11 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 12-13 0.0 2.9893409071274555E-5 0.0 5.978681814254911E-5 0.0 14-15 0.0 2.9893409071274555E-5 0.0 7.473352267818638E-5 0.0 16-17 0.0 2.9893409071274555E-5 0.0 8.968022721382367E-5 7.473352267818638E-5 18-19 0.0 4.484011360691183E-5 0.0 1.0462693174946095E-4 1.1957363628509822E-4 20-21 0.0 5.978681814254911E-5 0.0 1.494670453563728E-4 1.3452034082073552E-4 22-23 0.0 5.978681814254911E-5 0.0 1.7936045442764733E-4 1.6441374989201006E-4 24-25 0.0 5.978681814254911E-5 0.0 3.5872090885529466E-4 1.7936045442764733E-4 26-27 0.0 5.978681814254911E-5 0.0 7.174418177105893E-4 1.7936045442764733E-4 28-29 0.0 5.978681814254911E-5 0.0 0.0030939678388769167 1.7936045442764733E-4 30-31 0.0 5.978681814254911E-5 0.0 0.013750968172786296 1.7936045442764733E-4 32-33 0.0 5.978681814254911E-5 0.0 0.04162657213174982 2.2420056803455917E-4 34-35 0.0 5.978681814254911E-5 0.0 0.07688584813131816 2.3914727257019644E-4 36-37 0.0 5.978681814254911E-5 0.0 0.13069398445961236 2.3914727257019644E-4 38-39 0.0 5.978681814254911E-5 0.0 0.2230048316717082 2.540939771058337E-4 40-41 0.0 5.978681814254911E-5 2.9893409071274555E-5 0.3312189725097221 2.69040681641471E-4 42-43 0.0 5.978681814254911E-5 2.9893409071274555E-5 0.44294558891361074 2.69040681641471E-4 44-45 0.0 7.473352267818638E-5 2.9893409071274555E-5 0.5802908568915817 2.69040681641471E-4 46-47 0.0 8.968022721382367E-5 2.9893409071274555E-5 0.7396974607641533 2.69040681641471E-4 48-49 0.0 8.968022721382367E-5 2.9893409071274555E-5 0.9051873733827291 3.288274997840201E-4 50-51 0.0 8.968022721382367E-5 2.9893409071274555E-5 1.0774630898604844 3.288274997840201E-4 52-53 0.0 8.968022721382367E-5 2.9893409071274555E-5 1.2518014515641576 4.932412496760302E-4 54-55 0.0 8.968022721382367E-5 2.9893409071274555E-5 1.4546880189308982 5.978681814254912E-4 56-57 0.0 8.968022721382367E-5 2.9893409071274555E-5 1.6865861398013104 5.978681814254912E-4 58-59 0.0 8.968022721382367E-5 2.9893409071274555E-5 1.9313533732769064 5.978681814254912E-4 60-61 0.0 8.968022721382367E-5 2.9893409071274555E-5 2.1926815553779884 5.978681814254912E-4 62-63 0.0 8.968022721382367E-5 2.9893409071274555E-5 2.464053922927019 5.978681814254912E-4 64-65 0.0 8.968022721382367E-5 2.9893409071274555E-5 2.74892316467173 5.978681814254912E-4 66-67 0.0 8.968022721382367E-5 2.9893409071274555E-5 3.0760616868432233 6.277615904967658E-4 68-69 0.0 8.968022721382367E-5 2.9893409071274555E-5 3.429655876042794 6.576549995680402E-4 70-71 0.0 8.968022721382367E-5 2.9893409071274555E-5 3.811364816473899 6.576549995680402E-4 72-73 0.0 8.968022721382367E-5 2.9893409071274555E-5 4.199246745878222 7.174418177105893E-4 74-75 0.0 8.968022721382367E-5 2.9893409071274555E-5 4.602628407886001 7.174418177105893E-4 76-77 0.0 8.968022721382367E-5 2.9893409071274555E-5 5.053794684294212 7.174418177105893E-4 78-79 0.0 8.968022721382367E-5 2.9893409071274555E-5 5.54968150067305 7.323885222462266E-4 80-81 0.0 8.968022721382367E-5 2.9893409071274555E-5 6.073040359988389 7.772286358531384E-4 82-83 0.0 8.968022721382367E-5 2.9893409071274555E-5 6.6062042574791064 8.07122044924413E-4 84-85 0.0 8.968022721382367E-5 2.9893409071274555E-5 7.164359044953409 8.370154539956876E-4 86-87 0.0 8.968022721382367E-5 2.9893409071274555E-5 7.7576834282000675 8.370154539956876E-4 88-89 0.0 8.968022721382367E-5 2.9893409071274555E-5 8.403156863571564 8.370154539956876E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2270 0.0 45.78883 1 GTATCAA 4265 0.0 42.954582 1 TCAACGC 4845 0.0 37.32153 4 CAACGCA 5030 0.0 35.66474 5 ATCAACG 5235 0.0 34.45202 3 AACGCAG 5330 0.0 33.81671 6 TATCAAC 5540 0.0 32.727615 2 GTACATG 9020 0.0 28.83469 1 TACATGG 9380 0.0 27.425669 2 ACGCAGA 6560 0.0 26.973972 7 ACATGGG 9650 0.0 25.919765 3 CGCAGAG 6820 0.0 25.668169 8 CATGGGG 8245 0.0 23.312702 4 GAGTACA 6470 0.0 21.273306 1 GCAGAGT 7960 0.0 20.741425 9 AGAGTAC 6150 0.0 19.78751 10-11 AGTACAT 6950 0.0 18.507393 2 GTATATG 1065 0.0 17.825907 1 GTGTAAG 1655 0.0 17.78013 1 ATGGGGG 4925 0.0 17.0562 5 >>END_MODULE