##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921676_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3345219 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45012508897026 33.0 31.0 34.0 29.0 34.0 2 31.5826336033605 34.0 31.0 34.0 29.0 34.0 3 31.65765440169986 34.0 31.0 34.0 28.0 34.0 4 35.136689705517036 37.0 35.0 37.0 33.0 37.0 5 34.88313620124721 37.0 35.0 37.0 32.0 37.0 6 34.86122074518888 37.0 35.0 37.0 32.0 37.0 7 34.74488396723802 37.0 35.0 37.0 32.0 37.0 8 34.68981223650828 37.0 35.0 37.0 32.0 37.0 9 36.28804362285399 39.0 37.0 39.0 32.0 39.0 10-11 36.17892416012225 39.0 37.0 39.0 32.0 39.0 12-13 36.104257897614474 39.0 37.0 39.0 32.0 39.0 14-15 37.35484477996806 40.0 38.0 41.0 32.0 41.0 16-17 37.320853133980165 40.0 38.0 41.0 32.0 41.0 18-19 37.27942251314488 40.0 38.0 41.0 31.0 41.0 20-21 37.219222867023056 40.0 38.0 41.0 31.0 41.0 22-23 37.132434827136876 40.0 38.0 41.0 31.0 41.0 24-25 37.04769747511299 40.0 37.5 41.0 31.0 41.0 26-27 36.920790387714526 40.0 37.0 41.0 30.0 41.0 28-29 36.80327282010535 40.0 37.0 41.0 30.0 41.0 30-31 36.651757029958276 40.0 37.0 41.0 30.0 41.0 32-33 36.61032865112867 40.0 37.0 41.0 30.0 41.0 34-35 36.74667951485389 40.0 37.0 41.0 30.0 41.0 36-37 36.74659685957781 40.0 37.0 41.0 30.0 41.0 38-39 36.641646182208106 40.0 37.0 41.0 30.0 41.0 40-41 36.5620189589979 40.0 37.0 41.0 30.0 41.0 42-43 36.448186949793126 40.0 37.0 41.0 30.0 41.0 44-45 36.32256049603927 40.0 36.5 41.0 29.0 41.0 46-47 36.17025671562908 40.0 36.0 41.0 28.5 41.0 48-49 36.02877793651178 40.0 36.0 41.0 28.0 41.0 50-51 35.86916701118821 40.0 35.0 41.0 28.0 41.0 52-53 35.697034484139905 39.0 35.0 41.0 28.0 41.0 54-55 35.482349586080915 39.0 35.0 41.0 27.0 41.0 56-57 35.24909759271366 39.0 35.0 41.0 27.0 41.0 58-59 35.000717591284754 38.5 35.0 40.5 26.0 41.0 60-61 34.71755855147302 38.0 34.5 40.0 26.0 41.0 62-63 34.408436786948776 37.5 34.0 40.0 26.0 41.0 64-65 34.069131348351185 37.0 34.0 40.0 26.0 41.0 66-67 33.71100950341368 36.5 34.0 39.0 25.0 41.0 68-69 33.34455232975778 36.0 34.0 39.0 24.0 41.0 70-71 32.94392967994024 35.0 33.0 38.5 23.0 40.0 72-73 32.577792814162535 35.0 33.0 37.5 22.5 40.0 74-75 32.180990691491346 35.0 33.0 37.0 21.5 39.0 76-77 29.4790604142808 33.0 29.0 34.5 16.5 36.5 78-79 31.04893192344059 34.5 31.5 36.0 19.0 37.0 80-81 31.22812871145357 35.0 32.0 35.5 20.0 37.0 82-83 31.056018454995026 35.0 32.0 35.0 19.0 37.0 84-85 30.863661093638413 35.0 32.0 35.0 18.0 36.0 86-87 30.65769072219188 35.0 32.0 35.0 16.5 36.0 88-89 30.390781291150148 35.0 32.0 35.0 10.0 36.0 90-91 30.195045227233255 34.5 32.0 35.0 4.5 35.0 92-93 30.034532417758 34.0 31.0 35.0 2.0 35.0 94-95 29.930012803347104 34.0 31.0 35.0 2.0 35.0 96-97 29.728774558556555 34.0 31.0 35.0 2.0 35.0 98-99 29.52856419863692 34.0 31.0 35.0 2.0 35.0 100-101 28.404492501088868 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57245.0 3 20506.0 4 11262.0 5 8155.0 6 6979.0 7 7003.0 8 7402.0 9 8008.0 10 8801.0 11 9503.0 12 10131.0 13 10811.0 14 11485.0 15 12510.0 16 13138.0 17 13925.0 18 13569.0 19 12484.0 20 11979.0 21 12061.0 22 12613.0 23 14432.0 24 17227.0 25 20419.0 26 24408.0 27 29733.0 28 35518.0 29 43168.0 30 52185.0 31 65383.0 32 83189.0 33 109450.0 34 156780.0 35 233769.0 36 411945.0 37 811101.0 38 849312.0 39 107628.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.68830433820467 18.89953163212475 13.054111297334995 26.35805273233559 2 15.166841443830764 20.343165096860826 37.955561560821856 26.534431898486556 3 17.943943674604242 24.20625738074951 28.985096491621448 28.864702453024798 4 13.047365961763195 16.237832201344276 35.10269216982855 35.612109667063976 5 14.102257039287608 37.42783696738696 34.35311692571651 14.116789067608918 6 34.454348996502695 35.34148383735144 16.392563444819082 13.81160372132678 7 29.38113450304285 31.57925731596566 20.687381211030193 18.3522269699613 8 26.786377812633493 35.49325171236921 19.338584409570796 18.38178606542651 9 26.848026047928713 15.152584973535358 18.786189719175255 39.21319925936068 10-11 25.9241330672658 25.125182741979092 27.751807081894725 21.198877108860383 12-13 26.263441993275755 22.42196073367059 27.62546532994819 23.689131943105465 14-15 23.313047124143978 24.09919440605851 24.513553245506976 28.074205224290537 16-17 23.827980145392598 27.286453784707938 25.30064926999537 23.5849167999041 18-19 23.925079342113268 26.656125085589938 26.502754497497953 22.91604107479884 20-21 24.34966310769568 25.772324804268553 26.40932545759106 23.46868663044471 22-23 24.184933781614895 25.606544743408428 26.17419068826286 24.034330786713813 24-25 23.99145881430813 25.892374842423614 26.127577309956973 23.988589033311282 26-27 23.817852952839676 26.023280845281494 26.168537631268084 23.990328570610746 28-29 24.02697075557308 26.240851914504216 25.963784186721167 23.768393143201536 30-31 24.24642746785427 25.93564680804562 25.82612867140269 23.991797052697418 32-33 23.92012156064616 26.061364806757886 25.80063426195482 24.21787937064113 34-35 24.208802551360176 26.022767615902804 25.9646489824381 23.803780850298928 36-37 24.27069966346021 25.924221373378302 25.945596096945582 23.859482866215902 38-39 24.181540879685308 25.987162574408433 25.88110075902355 23.950195786882713 40-41 24.24809240118818 25.81730906486292 25.93080314136298 24.003795392585918 42-43 24.05721312195861 25.821034250083034 25.882829874881054 24.2389227530773 44-45 24.01774897178087 25.82237724711564 25.99019576335601 24.169678017747476 46-47 24.187656777496205 25.868335452348756 25.811401548590222 24.132606221564814 48-49 23.935110258478826 25.96401335690927 25.870349368470634 24.230527016141266 50-51 24.01090063410158 25.96432451807129 25.907555364498176 24.117219483328956 52-53 24.22131178170154 25.896979054719598 25.847594050482115 24.03411511309674 54-55 23.718614161487046 25.75741473408928 26.12973772372226 24.394233380701415 56-57 23.80823187365935 25.85343468089718 25.965514921859235 24.372818523584236 58-59 23.884265991848604 25.796632527123474 25.990102562140027 24.32899891888789 60-61 23.918183909520145 25.763180517108474 26.089402117899276 24.229233455472112 62-63 23.9084210307575 25.76804046881127 26.103815471453668 24.219723028977562 64-65 23.628232545606956 25.6365804255762 26.095049917116324 24.64013711170052 66-67 23.634342696824984 25.884820124076498 25.923510837512616 24.557326341585906 68-69 23.77352017878207 25.676160276978223 25.95139482077528 24.598924723464428 70-71 23.70072703167422 25.522853156593 25.976380444810328 24.80003936692245 72-73 23.642672765418926 25.69932704798222 25.83331040719219 24.824689779406665 74-75 23.55668988720839 25.809277791017514 25.85726976783545 24.776762553938646 76-77 23.540816042192073 25.44191024476711 26.05776061655749 24.959513096483324 78-79 23.491648038019346 25.450120628064788 26.045025601393775 25.013205732522092 80-81 23.594796766158847 25.618093787854747 25.823690056669847 24.963419389316563 82-83 23.488440310570784 25.682550636995433 25.870019202857165 24.95898984957662 84-85 23.43660833601518 25.589044070408328 25.930186859871245 25.044160733705244 86-87 23.34847317985686 25.692245264616272 25.835920997192748 25.123360558334127 88-89 23.230213659646616 25.502354258577192 25.926255717003276 25.341176364772917 90-91 23.15065381890959 25.4412574910894 25.93737280608057 25.47071588392044 92-93 23.238815150645504 25.371108503316464 26.041878682913822 25.34819766312421 94-95 23.08042784633587 25.20752161691295 26.134203117140537 25.577847419610645 96-97 22.96020737192855 25.11071944844329 26.15420147904978 25.774871700578377 98-99 22.830700990260024 25.086377960900187 26.148158754889867 25.934762293949927 100-101 22.784285666669707 25.048027577313075 26.16004927637653 26.00763747964069 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 24.0 2 40.5 3 57.5 4 59.5 5 66.5 6 104.5 7 237.5 8 354.5 9 398.5 10 358.0 11 294.0 12 321.5 13 355.0 14 380.5 15 419.5 16 454.5 17 530.0 18 628.0 19 679.5 20 776.5 21 913.5 22 1055.5 23 1304.0 24 1570.5 25 2017.5 26 2799.5 27 3945.5 28 5895.0 29 8674.0 30 12579.0 31 18136.0 32 26327.0 33 32812.0 34 37259.5 35 43921.0 36 52917.0 37 62270.0 38 71064.0 39 79708.5 40 88005.5 41 95789.5 42 103214.0 43 112411.5 44 122398.0 45 132020.5 46 138186.0 47 143025.5 48 149152.5 49 150997.0 50 150285.0 51 149670.0 52 148650.5 53 148168.0 54 146133.5 55 139347.0 56 128485.0 57 116001.0 58 104731.5 59 92475.5 60 75896.0 61 60674.0 62 48983.0 63 36717.0 64 25619.5 65 18257.5 66 13410.5 67 10187.0 68 7532.0 69 5349.0 70 3794.5 71 2677.5 72 1821.5 73 1243.0 74 842.5 75 540.0 76 327.5 77 179.5 78 103.5 79 53.5 80 44.5 81 39.5 82 18.5 83 10.0 84 8.5 85 6.5 86 5.5 87 3.0 88 0.5 89 1.0 90 1.5 91 1.5 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1718871021598287 2 2.092538634989219E-4 3 0.011030667947300312 4 0.006636336813822951 5 0.02636598680086416 6 0.00203275181684667 7 2.9893409071274555E-5 8 0.0 9 2.9893409071274555E-5 10-11 0.05102804928466567 12-13 3.5872090885529466E-4 14-15 0.005126719655723587 16-17 1.4946704535637278E-5 18-19 0.0015992973853131886 20-21 3.138807952483829E-4 22-23 0.0 24-25 4.782945451403929E-4 26-27 0.003243434884233289 28-29 0.005634907609935254 30-31 0.01696450964794831 32-33 0.011553802606047615 34-35 0.010059132152483889 36-37 0.0043793844289417225 38-39 0.0 40-41 0.0033032217023758383 42-43 0.009625677720950406 44-45 0.007069791245356433 46-47 0.0033480618159827504 48-49 0.008474781471706336 50-51 0.0027651403390928963 52-53 0.0022121122712743173 54-55 0.0041701305654428 56-57 0.00878866226695472 58-59 0.015395105671706398 60-61 0.0075779791995681 62-63 0.021448521008639494 64-65 0.04113333088207379 66-67 0.06096760780086445 68-69 0.05102804928466567 70-71 0.0690836683637155 72-73 0.034287740204751914 74-75 0.027203002254859845 76-77 0.23077711803023956 78-79 0.08730370119265735 80-81 0.06754415779654487 82-83 0.027651403390928964 84-85 0.05234335928380175 86-87 0.06799255893261398 88-89 0.29217818026263753 90-91 0.29912839787170886 92-93 0.05451063144146915 94-95 0.009760198061771143 96-97 0.015066278171922375 98-99 0.0011060561356371586 100-101 1.6441374989201006E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3345219.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.13008447353541 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72075882255457 43.063426735837254 2 12.518172419308037 14.052921507000828 3 4.248030758648182 7.153269759872975 4 1.9971746954832916 4.484063374635381 5 1.1300955078105452 3.1716178158284403 6 0.7184906951097179 2.419736604597458 7 0.49649029636156694 1.9507629592545772 8 0.3671524377957523 1.648663787851203 9 0.2693207131762496 1.3605294942950126 >10 1.4312935146640737 14.198560613310542 >50 0.07278854708202097 2.7722290597218278 >100 0.028093544171275936 2.6732711764212445 >500 0.0015500846818745741 0.626745987106913 >1k 5.87963152847534E-4 0.4242011242662835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9893409071274555E-5 2 0.0 0.0 0.0 2.9893409071274555E-5 2.9893409071274555E-5 3 0.0 0.0 0.0 2.9893409071274555E-5 2.9893409071274555E-5 4 0.0 0.0 0.0 2.9893409071274555E-5 2.9893409071274555E-5 5 0.0 0.0 0.0 2.9893409071274555E-5 2.9893409071274555E-5 6 0.0 0.0 0.0 5.978681814254911E-5 2.9893409071274555E-5 7 0.0 0.0 0.0 8.968022721382367E-5 2.9893409071274555E-5 8 0.0 0.0 0.0 8.968022721382367E-5 2.9893409071274555E-5 9 0.0 0.0 0.0 8.968022721382367E-5 2.9893409071274555E-5 10-11 0.0 0.0 0.0 8.968022721382367E-5 2.9893409071274555E-5 12-13 1.4946704535637278E-5 0.0 0.0 8.968022721382367E-5 8.968022721382367E-5 14-15 2.9893409071274555E-5 0.0 0.0 1.0462693174946095E-4 1.0462693174946095E-4 16-17 2.9893409071274555E-5 0.0 0.0 1.6441374989201006E-4 1.1957363628509822E-4 18-19 2.9893409071274555E-5 0.0 0.0 1.943071589632846E-4 1.7936045442764733E-4 20-21 2.9893409071274555E-5 0.0 0.0 2.3914727257019644E-4 1.7936045442764733E-4 22-23 2.9893409071274555E-5 0.0 0.0 2.69040681641471E-4 1.943071589632846E-4 24-25 2.9893409071274555E-5 0.0 0.0 4.185077269978438E-4 2.092538634989219E-4 26-27 2.9893409071274555E-5 0.0 0.0 8.071220449244131E-4 2.3914727257019644E-4 28-29 2.9893409071274555E-5 0.0 0.0 0.0032284881796976524 2.3914727257019644E-4 30-31 2.9893409071274555E-5 0.0 0.0 0.014124635786177227 2.540939771058337E-4 32-33 2.9893409071274555E-5 0.0 0.0 0.042657894744708796 2.69040681641471E-4 34-35 2.9893409071274555E-5 0.0 0.0 0.07887375983455791 2.69040681641471E-4 36-37 2.9893409071274555E-5 0.0 0.0 0.13410183309373766 2.69040681641471E-4 38-39 2.9893409071274555E-5 0.0 0.0 0.22857995246350088 2.69040681641471E-4 40-41 2.9893409071274555E-5 0.0 0.0 0.3383485505732211 2.69040681641471E-4 42-43 2.9893409071274555E-5 0.0 0.0 0.4512260632263538 2.69040681641471E-4 44-45 2.9893409071274555E-5 0.0 0.0 0.5900958950669597 2.839873861771083E-4 46-47 2.9893409071274555E-5 0.0 0.0 0.7519836518924471 2.989340907127456E-4 48-49 2.9893409071274555E-5 0.0 0.0 0.9188486613283017 2.989340907127456E-4 50-51 2.9893409071274555E-5 0.0 0.0 1.0928731422367264 2.989340907127456E-4 52-53 2.9893409071274555E-5 0.0 0.0 1.2690051084846763 2.989340907127456E-4 54-55 2.9893409071274555E-5 0.0 0.0 1.4732219325550884 2.989340907127456E-4 56-57 2.9893409071274555E-5 0.0 0.0 1.7064802035382436 3.288274997840201E-4 58-59 2.9893409071274555E-5 0.0 0.0 1.9535641762168634 3.5872090885529466E-4 60-61 2.9893409071274555E-5 0.0 0.0 2.2178219124069303 3.8861431792656926E-4 62-63 2.9893409071274555E-5 0.0 0.0 2.4903302295006693 4.185077269978438E-4 64-65 2.9893409071274555E-5 0.0 0.0 2.7769631823805856 4.4840113606911834E-4 66-67 2.9893409071274555E-5 0.0 0.0 3.10659780420953 4.782945451403929E-4 68-69 2.9893409071274555E-5 0.0 0.0 3.463031867270872 4.782945451403929E-4 70-71 2.9893409071274555E-5 0.0 0.0 3.8475507881546767 4.782945451403929E-4 72-73 2.9893409071274555E-5 0.0 0.0 4.240634170737401 5.679747723542166E-4 74-75 2.9893409071274555E-5 0.0 0.0 4.648858565014727 5.679747723542166E-4 76-77 2.9893409071274555E-5 0.0 0.0 5.104493906079094 5.679747723542166E-4 78-79 2.9893409071274555E-5 0.0 0.0 5.605537335522727 5.679747723542166E-4 80-81 2.9893409071274555E-5 0.0 0.0 6.134516155743466 5.679747723542166E-4 82-83 2.9893409071274555E-5 0.0 0.0 6.676095047887747 5.679747723542166E-4 84-85 2.9893409071274555E-5 0.0 0.0 7.242350949220365 5.679747723542166E-4 86-87 2.9893409071274555E-5 0.0 0.0 7.843701712802659 5.679747723542166E-4 88-89 2.9893409071274555E-5 0.0 0.0 8.5002656029396 5.978681814254912E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2340 0.0 46.32077 1 GTATCAA 4155 0.0 43.24915 1 TCAACGC 5090 0.0 34.777153 4 CAACGCA 5340 0.0 33.177776 5 ATCAACG 5475 0.0 32.244953 3 TATCAAC 5555 0.0 32.036877 2 AACGCAG 5650 0.0 31.52271 6 GTACATG 9120 0.0 27.053865 1 TACATGG 9325 0.0 26.158764 2 ACGCAGA 6845 0.0 25.533398 7 ACATGGG 10010 0.0 24.03681 3 CGTTATA 120 1.722239E-4 23.728647 2 CGCAGAG 7285 0.0 23.339294 8 GTATAGC 870 0.0 21.310919 1 CATGGGG 8625 0.0 21.018766 4 GTATATA 1000 0.0 19.015896 1 AGAGTAC 6970 0.0 18.15928 10-11 GCAGAGT 8775 0.0 18.023178 9 GTATAGG 935 0.0 17.795626 1 ATGGGGG 4805 0.0 17.595692 5 >>END_MODULE