##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921675_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2826058 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.85730936873907 31.0 31.0 34.0 25.0 34.0 2 29.9152533316726 31.0 31.0 34.0 25.0 34.0 3 29.96690443012847 31.0 31.0 34.0 25.0 34.0 4 33.407824255553145 37.0 35.0 37.0 28.0 37.0 5 33.405619063727634 37.0 35.0 37.0 27.0 37.0 6 33.44103411890343 37.0 35.0 37.0 28.0 37.0 7 33.342823112618355 37.0 35.0 37.0 27.0 37.0 8 33.30707756174856 37.0 35.0 37.0 27.0 37.0 9 34.80477329198481 39.0 35.0 39.0 27.0 39.0 10-11 34.69200313652445 39.0 35.0 39.0 27.0 39.0 12-13 34.57201922253542 39.0 35.0 39.0 27.0 39.0 14-15 35.63894920061796 40.0 36.0 41.0 27.0 41.0 16-17 35.57541175729585 40.0 36.0 41.0 26.0 41.0 18-19 35.546518684329904 40.0 36.0 41.0 26.0 41.0 20-21 35.46832672931695 40.0 36.0 41.0 25.0 41.0 22-23 35.36427897091992 40.0 36.0 41.0 25.0 41.0 24-25 35.24419792516643 40.0 35.5 41.0 24.5 41.0 26-27 35.0941564185873 39.5 35.0 41.0 24.0 41.0 28-29 34.95040229181425 39.0 35.0 41.0 23.0 41.0 30-31 34.79052305366698 39.0 35.0 41.0 22.5 41.0 32-33 34.60404793532192 39.0 34.5 41.0 21.0 41.0 34-35 34.425015516312826 39.0 34.0 41.0 19.0 41.0 36-37 34.380072171201014 39.0 34.0 41.0 18.5 41.0 38-39 34.553408670310375 39.0 35.0 41.0 19.5 41.0 40-41 34.606953218936056 39.0 35.0 41.0 18.5 41.0 42-43 34.445568526902136 39.0 35.0 41.0 16.0 41.0 44-45 34.316750399319474 39.0 34.5 41.0 15.0 41.0 46-47 34.14800403954908 39.0 34.0 41.0 13.0 41.0 48-49 33.975983507769485 39.0 34.0 41.0 9.0 41.0 50-51 32.312958545082935 37.0 32.0 39.5 7.5 40.0 52-53 32.42576620861992 37.5 32.0 39.5 7.0 40.0 54-55 33.32712102865547 38.0 33.0 40.0 4.0 41.0 56-57 33.35480464307527 38.0 33.0 41.0 2.0 41.0 58-59 33.17238393550309 38.0 33.0 40.0 2.0 41.0 60-61 32.92666941018196 37.5 33.0 40.0 2.0 41.0 62-63 32.63950209089835 37.0 32.5 40.0 2.0 41.0 64-65 32.36154636599815 36.5 32.0 40.0 2.0 41.0 66-67 32.02285816497751 36.0 32.0 39.0 2.0 41.0 68-69 31.664190013085367 35.5 32.0 39.0 2.0 41.0 70-71 31.255605157431305 35.0 31.0 39.0 2.0 40.5 72-73 30.89026021405081 35.0 31.0 37.5 2.0 40.0 74-75 30.495688340437457 35.0 31.0 37.0 2.0 39.0 76-77 30.11704607619518 35.0 31.0 36.5 2.0 39.0 78-79 29.76304856446683 35.0 30.0 36.0 2.0 38.5 80-81 29.44235840170301 35.0 30.0 36.0 2.0 37.0 82-83 29.125268837369934 35.0 30.0 35.0 2.0 37.0 84-85 28.851826289481675 34.5 29.5 35.0 2.0 36.5 86-87 28.608609412828752 34.0 29.0 35.0 2.0 36.0 88-89 28.373699513598094 34.0 29.0 35.0 2.0 36.0 90-91 28.14023827536448 34.0 29.0 35.0 2.0 35.5 92-93 27.936127460936753 34.0 29.0 35.0 2.0 35.0 94-95 27.69080677042014 34.0 29.0 35.0 2.0 35.0 96-97 27.43660887356169 34.0 28.5 35.0 2.0 35.0 98-99 27.150740182968644 34.0 27.0 35.0 2.0 35.0 100-101 26.069712298898324 33.0 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 124662.0 3 20305.0 4 13630.0 5 10156.0 6 9030.0 7 9449.0 8 9810.0 9 10520.0 10 11521.0 11 12174.0 12 12146.0 13 12456.0 14 13078.0 15 13960.0 16 14271.0 17 15071.0 18 14152.0 19 13177.0 20 13305.0 21 14089.0 22 15486.0 23 17702.0 24 20758.0 25 23973.0 26 28569.0 27 33352.0 28 39332.0 29 45549.0 30 54057.0 31 65511.0 32 80391.0 33 103146.0 34 140890.0 35 201276.0 36 326292.0 37 565737.0 38 591888.0 39 105179.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.08993512333082 18.24973198188948 12.902682163801908 24.757650730977794 2 15.901048808404067 19.674860895481793 39.75219705812359 24.67189323799055 3 19.05926963894853 23.904392910349586 29.63804197824916 27.398295472452727 4 13.134592523263214 15.701912157001061 37.01720222431627 34.14629309541945 5 13.936955761951857 37.45136803354937 34.67981956199272 13.931856642506046 6 33.18048965889921 35.50839189273835 17.245218371108972 14.06590007725347 7 28.711207622649948 32.06253777846355 21.11315348779269 18.113101111093812 8 26.432875533260518 34.9025425918284 20.112778362523013 18.551803512388066 9 26.93929375095324 15.252839197037957 19.50527391930392 38.302593132704885 10-11 25.53844727375872 25.185772913526215 28.233377670516045 21.042402142199023 12-13 26.028333978086415 22.86167020189561 27.812400566155738 23.297595253862234 14-15 23.23969763006198 24.48227962634926 25.142554526132756 27.135468217456012 16-17 23.3388012734419 27.44706542574099 26.01006315709742 23.204070143719694 18-19 23.32617185841159 26.878781272914125 27.23540998411759 22.559636884556696 20-21 23.99000668556841 26.032661956921437 27.16246639077342 22.81486496673673 22-23 23.859713523930353 25.877538276810757 26.764545754470525 23.49820244478836 24-25 23.525014123673827 26.062479026875334 26.855599417212616 23.556907432238226 26-27 23.379270912800358 26.291694693031893 26.75144210801445 23.577592286153305 28-29 23.511720444795817 26.505956303220458 26.641230315817488 23.341092936166238 30-31 23.867624641577777 26.165561208916916 26.478893675224562 23.48792047428074 32-33 23.573397644594174 26.303329275542847 26.331462503184895 23.791810576678085 34-35 23.959620337039787 26.284750758821662 26.41515042406431 23.340478480074243 36-37 23.936510419090183 26.099715202039885 26.50130208771041 23.462472291159514 38-39 23.768576014630092 26.1718689179874 26.522139764384157 23.537415302998347 40-41 24.001031836727762 26.032752323623065 26.525227894906227 23.44098794474295 42-43 23.754466150371258 26.03950342704157 26.320619270712786 23.885411151874386 44-45 23.656798585833155 26.04336471001246 26.53562810390651 23.76420860024787 46-47 23.84481185110792 26.03219421427595 26.271231370271053 23.851762564345076 48-49 23.609784850537007 26.172253275191252 26.32243178173702 23.895530092534713 50-51 23.72702633024494 26.26065059453962 26.35765713339383 23.65466594182161 52-53 23.900959184817033 26.04481491910801 26.359619475360024 23.69460642071493 54-55 23.355067758423743 25.930873747294577 26.697914778971676 24.016143715310005 56-57 23.50712431672914 26.060543836261118 26.50298310924993 23.929348737759817 58-59 23.567324026387553 25.9078457372052 26.608500176719772 23.91633005968748 60-61 23.550941889766825 25.988953662524334 26.676995451539394 23.783108996169446 62-63 23.555330870227316 25.896055885884756 26.720970612246635 23.82764263164129 64-65 23.374637844474428 25.77220982651467 26.672768865733946 24.180383463276954 66-67 23.343260642215792 25.909957015154454 26.553630341676502 24.19315200095325 68-69 23.491124165931883 25.808066238567996 26.61069362516904 24.090115970331087 70-71 23.421401519516607 25.60618089459794 26.60790450738395 24.364513078501503 72-73 23.314058165237107 25.80526075202944 26.528824272668565 24.351856810064888 74-75 23.323321175713367 25.86565859488174 26.54878444486605 24.26223578453884 76-77 23.26129577536707 25.56612293948129 26.67172085558577 24.500860429565872 78-79 23.235116837830443 25.541549679286263 26.750102542213433 24.473230940669865 80-81 23.406934099118505 25.691644366046685 26.556894824370314 24.3445267104645 82-83 23.351967731826406 25.64688781425263 26.648981102588152 24.352163351332813 84-85 23.304739304638574 25.681157220221312 26.62459878595232 24.389504689187795 86-87 23.20801344395673 25.69986018937759 26.685949014709383 24.406177351956302 88-89 23.12338309834274 25.430100718362823 26.789442113280042 24.657074070014392 90-91 23.131088953801466 25.395535884695587 26.816584445909196 24.65679071559375 92-93 23.22931925880638 25.25303800806919 26.938639624390763 24.579003108733666 94-95 23.132361893328905 25.138209547810714 26.981618413939014 24.747810144921367 96-97 23.054606385482902 24.974185707866827 27.096713881854 24.874494024796267 98-99 22.93905621177455 24.88542897021854 27.052474125846587 25.12304069216032 100-101 23.105493237667552 24.79447987052196 27.187247889276694 24.912779002533792 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 43.5 2 60.5 3 85.0 4 80.5 5 112.0 6 185.0 7 362.5 8 556.0 9 617.0 10 573.5 11 551.5 12 613.5 13 681.5 14 754.5 15 860.0 16 939.0 17 990.0 18 1130.0 19 1284.0 20 1374.0 21 1541.0 22 1706.5 23 1881.5 24 2194.5 25 2609.0 26 3246.5 27 4374.0 28 6136.0 29 8765.0 30 12816.5 31 18281.0 32 25986.0 33 32590.0 34 37776.5 35 44606.5 36 53450.5 37 62637.5 38 70219.5 39 77229.5 40 83280.0 41 88368.0 42 93187.5 43 99371.0 44 105681.0 45 112032.5 46 116757.0 47 119877.0 48 123112.5 49 124898.0 50 124816.0 51 122327.0 52 119339.5 53 116875.0 54 113117.0 55 107050.5 56 98111.0 57 87274.5 58 78702.5 59 68838.0 60 56241.5 61 45700.5 62 37348.5 63 28782.0 64 20482.5 65 14600.5 66 10668.5 67 8026.0 68 5894.0 69 4260.0 70 3146.5 71 2229.5 72 1537.5 73 1109.0 74 803.0 75 546.5 76 381.5 77 269.5 78 178.5 79 137.5 80 116.0 81 96.0 82 87.5 83 80.0 84 65.0 85 51.0 86 46.0 87 46.0 88 38.0 89 27.5 90 21.0 91 16.0 92 14.0 93 15.0 94 12.5 95 10.5 96 8.5 97 6.5 98 6.0 99 3.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.057394434226049146 2 0.0807485196694477 3 0.07667924720582521 4 0.07710386694115974 5 0.07222073998481277 6 0.010438568493640258 7 0.013233981751259175 8 0.018258648619384314 9 0.006050831228516895 10-11 0.012862439482841471 12-13 0.024309479847901213 14-15 0.04154196410689377 16-17 0.02836105982255141 18-19 0.010261643603917542 20-21 0.020134052450445108 22-23 0.039277325518443006 24-25 0.03588036763576685 26-27 0.021000984410086417 28-29 0.011040113118697494 30-31 0.010810110762057961 32-33 0.007713925191910428 34-35 0.004617739621762894 36-37 6.900070699185933E-4 38-39 0.0036092677503434113 40-41 0.0010438568493640256 42-43 0.2454125145343797 44-45 0.21312372215998399 46-47 0.219510710678974 48-49 0.2269415560473281 50-51 0.21744068946921827 52-53 0.22547307946262957 54-55 0.22154534691078528 56-57 0.2246592249699051 58-59 0.23433701643773766 60-61 0.23893706357052827 62-63 0.223349980785957 64-65 0.2232615183410956 66-67 0.2203422576606708 68-69 0.21476912363440526 70-71 0.20590518665929716 72-73 0.21920993836644542 74-75 0.2177237692927746 76-77 0.21071754365975504 78-79 0.22956004441522432 80-81 0.24120170215897904 82-83 0.24095400731336722 84-85 0.2351862559084067 86-87 0.25636416520821587 88-89 0.24801331041330363 90-91 0.2556210806713804 92-93 0.24997717668922576 94-95 0.2530025923034842 96-97 0.2606988250064224 98-99 0.25383413928518095 100-101 0.2602918977600601 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2826058.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.48584157718149 #Duplication Level Percentage of deduplicated Percentage of total 1 79.35122037826127 48.78976565133788 2 11.592103449785208 14.255004725195846 3 3.818467237138169 7.043450148310059 4 1.675113578696153 4.119830724939888 5 0.9364141114914993 2.8788104854901744 6 0.5607710005526444 2.0687686140634463 7 0.3793037329802027 1.6325266464958004 8 0.282446837998625 1.389318522812744 9 0.20876164373284262 1.1552296818554608 >10 1.1286958737009267 12.224150781158112 >50 0.04985617005259251 2.056027777720282 >100 0.015345064102646888 1.519846240096999 >500 9.236440045047705E-4 0.4129062747286188 >1k 5.772775027189877E-4 0.4543637257946863 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 3.538497794454325E-5 7 0.0 0.0 0.0 0.0 3.538497794454325E-5 8 0.0 0.0 0.0 0.0 7.07699558890865E-5 9 0.0 0.0 0.0 3.538497794454325E-5 1.41539911778173E-4 10-11 0.0 0.0 0.0 3.538497794454325E-5 1.41539911778173E-4 12-13 0.0 0.0 0.0 8.846244486135813E-5 1.7692488972271623E-4 14-15 0.0 0.0 0.0 1.0615493383362974E-4 2.1230986766725948E-4 16-17 0.0 0.0 0.0 1.0615493383362974E-4 2.83079823556346E-4 18-19 0.0 0.0 0.0 1.0615493383362974E-4 3.3615729047316084E-4 20-21 0.0 0.0 0.0 1.41539911778173E-4 3.5384977944543245E-4 22-23 0.0 0.0 0.0 2.300023566395311E-4 3.8923475738997574E-4 24-25 0.0 0.0 0.0 4.776972022513338E-4 4.2461973533451896E-4 26-27 0.0 0.0 0.0 9.553944045026677E-4 4.2461973533451896E-4 28-29 0.0 0.0 0.0 0.0035384977944543246 4.2461973533451896E-4 30-31 0.0 0.0 0.0 0.01578170016326629 4.2461973533451896E-4 32-33 0.0 0.0 0.0 0.04465584216601358 4.2461973533451896E-4 34-35 0.0 0.0 0.0 0.08324316061453799 4.600047132790622E-4 36-37 0.0 0.0 0.0 0.14716612327135536 4.600047132790622E-4 38-39 0.0 0.0 0.0 0.2520825828769261 4.600047132790622E-4 40-41 0.0 0.0 0.0 0.37203765810892775 4.600047132790622E-4 42-43 0.0 0.0 0.0 0.4939212146389069 4.776972022513338E-4 44-45 0.0 0.0 0.0 0.6465012395357774 5.130821801958771E-4 46-47 0.0 0.0 0.0 0.8258676927366672 5.484671581404204E-4 48-49 0.0 0.0 0.0 1.0116742119234636 5.66159647112692E-4 50-51 0.0 0.0 0.0 1.2072292925339818 6.369296030017784E-4 52-53 0.0 0.0 0.0 1.4032266853688071 6.5462209197405E-4 54-55 0.0 1.7692488972271625E-5 0.0 1.6286997648314365 6.723145809463217E-4 56-57 0.0 3.538497794454325E-5 0.0 1.8931493974999807 6.723145809463217E-4 58-59 0.0 3.538497794454325E-5 0.0 2.1662329647869933 6.900070699185933E-4 60-61 0.0 3.538497794454325E-5 0.0 2.454532072590159 7.607770258076798E-4 62-63 0.0 3.538497794454325E-5 0.0 2.7466173730333914 8.846244486135812E-4 64-65 0.0 3.538497794454325E-5 0.0 3.0686029798397625 9.023169375858527E-4 66-67 0.0 3.538497794454325E-5 0.0 3.442675274180502 9.200094265581244E-4 68-69 0.0 3.538497794454325E-5 0.0 3.8510002271715584 9.200094265581244E-4 70-71 0.0 3.538497794454325E-5 0.0 4.2756553474840215 9.200094265581244E-4 72-73 0.0 3.538497794454325E-5 0.0 4.709864411841512 9.553944045026677E-4 74-75 0.0 3.538497794454325E-5 0.0 5.166525244704815 9.553944045026677E-4 76-77 0.0 3.538497794454325E-5 0.0 5.67702432151074 9.730868934749393E-4 78-79 0.0 3.538497794454325E-5 0.0 6.239238543582616 9.907793824472108E-4 80-81 0.0 3.538497794454325E-5 0.0 6.822542212509439 9.907793824472108E-4 82-83 0.0 3.538497794454325E-5 0.0 7.428757654655354 0.001132319294225384 84-85 0.0 3.538497794454325E-5 0.0 8.058627954557195 0.001132319294225384 86-87 0.0 3.538497794454325E-5 0.0 8.7347818056105 0.001132319294225384 88-89 0.0 3.538497794454325E-5 0.0 9.460757705609723 0.001132319294225384 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2730 0.0 54.057873 1 GTATCAA 4915 0.0 42.963306 1 TCAACGC 6050 0.0 33.732708 4 CAACGCA 6145 0.0 33.05557 5 ATCAACG 6340 0.0 32.187447 3 TATCAAC 6370 0.0 32.03529 2 AACGCAG 6495 0.0 31.327932 6 GTACATG 8695 0.0 28.979183 1 TACATGG 8970 0.0 26.982199 2 ACGCAGA 7505 0.0 26.168577 7 ACATGGG 9205 0.0 25.675144 3 CGCAGAG 7655 0.0 25.348642 8 CATGGGG 7330 0.0 23.180199 4 GCAGAGT 8785 0.0 21.06311 9 GTATAGG 715 0.0 19.910236 1 AGAGTAC 7185 0.0 19.216639 10-11 CAGAGTA 7840 0.0 19.033377 10-11 GAGTACA 6625 0.0 18.76621 1 GTGTACG 355 8.0035534E-11 18.713753 1 GTATATA 985 0.0 18.306637 1 >>END_MODULE