##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921675_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2826058 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.299519330459603 33.0 31.0 34.0 28.0 34.0 2 31.431450805326712 33.0 31.0 34.0 28.0 34.0 3 31.500827300784344 34.0 31.0 34.0 28.0 34.0 4 34.98718816103562 37.0 35.0 37.0 32.0 37.0 5 34.73081691883181 37.0 35.0 37.0 32.0 37.0 6 34.704668835529915 37.0 35.0 37.0 32.0 37.0 7 34.586688595916996 37.0 35.0 37.0 32.0 37.0 8 34.530259110039495 37.0 35.0 37.0 31.0 37.0 9 36.10582337659029 39.0 37.0 39.0 32.0 39.0 10-11 35.99635304724815 39.0 37.0 39.0 31.0 39.0 12-13 35.92015025877035 39.0 37.0 39.0 30.5 39.0 14-15 37.140191036418926 40.0 38.0 41.0 31.0 41.0 16-17 37.10781236620055 40.0 38.0 41.0 31.0 41.0 18-19 37.07360995421892 40.0 38.0 41.0 31.0 41.0 20-21 37.01696532767551 40.0 37.5 41.0 31.0 41.0 22-23 36.92830791158568 40.0 37.0 41.0 30.0 41.0 24-25 36.842594879510614 40.0 37.0 41.0 30.0 41.0 26-27 36.71281233435407 40.0 37.0 41.0 30.0 41.0 28-29 36.58966217253857 40.0 37.0 41.0 30.0 41.0 30-31 36.43427151884356 40.0 36.5 41.0 30.0 41.0 32-33 36.37304648383012 40.0 36.5 41.0 29.5 41.0 34-35 36.49345413293004 40.0 37.0 41.0 30.0 41.0 36-37 36.48401943626068 40.0 37.0 41.0 30.0 41.0 38-39 36.37558588677231 40.0 37.0 41.0 29.5 41.0 40-41 36.29447467107894 40.0 36.5 41.0 29.0 41.0 42-43 36.16947759033962 40.0 36.0 41.0 28.5 41.0 44-45 36.03225464587068 40.0 36.0 41.0 28.0 41.0 46-47 35.86928895302219 40.0 36.0 41.0 27.5 41.0 48-49 35.72318473293896 40.0 35.0 41.0 27.0 41.0 50-51 35.56337396472401 39.5 35.0 41.0 27.0 41.0 52-53 35.391131569132696 39.0 35.0 41.0 26.0 41.0 54-55 35.17931974503 39.0 35.0 41.0 26.0 41.0 56-57 34.953002026143835 39.0 35.0 41.0 26.0 41.0 58-59 34.7090073876757 38.5 35.0 40.5 25.0 41.0 60-61 34.432827988668315 38.0 34.0 40.0 24.5 41.0 62-63 34.13594837756338 37.5 34.0 40.0 23.5 41.0 64-65 33.80202034070072 37.0 34.0 40.0 23.0 41.0 66-67 33.454987654181195 36.5 34.0 39.0 22.0 41.0 68-69 33.08798067838664 36.0 33.0 39.0 22.0 41.0 70-71 32.68951061867803 35.5 33.0 39.0 20.5 40.0 72-73 32.32554285863914 35.0 33.0 37.5 20.0 40.0 74-75 31.923398599745653 35.0 32.5 37.0 18.5 39.0 76-77 29.212703348622 33.0 29.0 34.5 11.0 36.5 78-79 30.769598677734145 34.5 31.0 36.0 12.0 37.5 80-81 30.94611593251094 35.0 32.0 36.0 13.0 37.0 82-83 30.758293177280862 35.0 32.0 35.0 10.5 37.0 84-85 30.54959240043906 35.0 32.0 35.0 7.0 36.5 86-87 30.332764578787838 35.0 32.0 35.0 4.5 36.0 88-89 30.04837038022574 35.0 31.0 35.0 2.0 36.0 90-91 29.841807917601123 34.0 31.0 35.0 2.0 35.0 92-93 29.671406425487376 34.0 31.0 35.0 2.0 35.0 94-95 29.556090320863902 34.0 31.0 35.0 2.0 35.0 96-97 29.342132928623545 34.0 31.0 35.0 2.0 35.0 98-99 29.124378020550182 34.0 31.0 35.0 2.0 35.0 100-101 27.99838078340926 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 55670.0 3 18438.0 4 10025.0 5 7093.0 6 6232.0 7 6253.0 8 6463.0 9 7148.0 10 7911.0 11 8633.0 12 9341.0 13 9900.0 14 10691.0 15 11935.0 16 12576.0 17 13644.0 18 12438.0 19 11323.0 20 11024.0 21 10913.0 22 11528.0 23 12860.0 24 15344.0 25 18360.0 26 21927.0 27 26089.0 28 31421.0 29 38219.0 30 45836.0 31 57387.0 32 72089.0 33 94429.0 34 133568.0 35 198080.0 36 342823.0 37 659459.0 38 706351.0 39 92636.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.077590026620726 19.712382714605244 13.419327853220894 25.790699405553134 2 15.136465802517716 21.033128855196075 38.060816912332946 25.769588429953266 3 17.75384154785156 24.882146291124936 29.54179582121413 27.822216339809376 4 12.875327196529533 16.957565038548765 35.87379741894709 34.29331034597461 5 13.726791436695809 37.79443171449424 34.60382719641192 13.874949652398033 6 33.177246992215146 36.13191790516631 16.947912243453644 13.742922859164896 7 28.566398849563594 32.18200051095908 21.063368126202647 18.188232513274674 8 26.395742762533537 35.37783017899845 19.83618170610794 18.390245352360072 9 26.74541711458151 15.229906817199081 19.37079847618131 38.6538775920381 10-11 25.460970924795394 25.458899801720946 28.185754603071032 20.894374670412628 12-13 25.929008358306344 23.031926883131266 27.820251651509476 23.218813107052917 14-15 23.19536418275249 24.5912333710616 25.0642315332462 27.149170912939713 16-17 23.349450011287807 27.66512576882711 25.90352002683597 23.081904193049116 18-19 23.255528811959174 27.03275709179077 27.188081870790448 22.523632225459604 20-21 23.9112146085146 26.169224506073054 27.07464003208718 22.844920853325164 22-23 23.782141729246487 26.002567180604075 26.753808087768917 23.461483002380525 24-25 23.50402187651714 26.18825113834038 26.770159983354823 23.537567001787657 26-27 23.29073163050373 26.431904656168253 26.767274744270352 23.510088969057662 28-29 23.40572687933963 26.671442693254356 26.61156837624002 23.311262051166 30-31 23.818052995620032 26.31453868782188 26.398379525423344 23.469028791134743 32-33 23.590738837598416 26.381179982843406 26.28076366652794 23.747317513030232 34-35 23.87255269725285 26.455163983970355 26.42104931622032 23.251234002556476 36-37 23.93527416704574 26.20886317718587 26.433743266203706 23.42211938956468 38-39 23.73465508044334 26.321863585578143 26.47914984036949 23.46433149360903 40-41 23.921329597739536 26.155590961325636 26.487388832320256 23.43569060861457 42-43 23.77362670378652 26.11728035391021 26.247721221748943 23.861371720554327 44-45 23.63660555784689 26.17116096141335 26.431064095343704 23.76116938539606 46-47 23.754836182420615 26.157414984305355 26.237794649506263 23.849954183767768 48-49 23.513996129261024 26.283177573070017 26.266492133071605 23.936334164597355 50-51 23.66714803206948 26.327278697829325 26.276022305819307 23.729550964281884 52-53 23.891615941367427 26.118610505427093 26.271564886981842 23.71820866622364 54-55 23.30395020562174 26.070178735122436 26.542976915834952 24.082894143420873 56-57 23.46278179723869 26.236404460982328 26.30022630479133 24.00058743698765 58-59 23.484335724845984 26.045828920581076 26.457190330963055 24.01264502360988 60-61 23.502143516995705 26.17574946126762 26.513241253550042 23.808865768186628 62-63 23.445789093864065 26.138593782129988 26.490521643200683 23.92509548080527 64-65 23.18574879500671 25.98879186325096 26.466116466636834 24.35934287510549 66-67 23.213740076923866 26.153300351124916 26.24953484889095 24.38342472306027 68-69 23.374495066610493 26.037728835281083 26.311145176536392 24.27663092157203 70-71 23.259995956258187 25.901299415002992 26.282728371381214 24.55597625735761 72-73 23.237044450756922 26.0828096779132 26.155161291178963 24.524984580150917 74-75 23.1668812465988 26.17627409599908 26.135304814111837 24.521539843290284 76-77 23.155427830650016 25.86709535889822 26.26707017648086 24.710406633970905 78-79 23.119257054628825 25.91380222938153 26.297383920098277 24.669556795891367 80-81 23.321369280611243 26.104786405984516 26.016069588260844 24.557774725143403 82-83 23.207939617902614 26.093446849146872 26.095092706921047 24.60352082602947 84-85 23.203314862946637 26.096208275014103 26.022835352755592 24.677641509283667 86-87 23.153879697328563 26.17956718175955 25.976105464413056 24.690447656498833 88-89 23.009129392925892 25.940993969575317 26.0573117479714 24.992564889527387 90-91 22.960289526183743 25.904582993353493 26.093415990877244 25.041711489585527 92-93 23.02105675346314 25.777564010420388 26.210336694209374 24.991042541907095 94-95 22.84821083534929 25.735936312278202 26.198515246012793 25.217337606359713 96-97 22.79280793738708 25.61654719415065 26.257752737014773 25.332892131447487 98-99 22.642699514107136 25.58305639934686 26.13174042992044 25.642503656625564 100-101 22.563744812332818 25.635254251202248 26.167675169631433 25.633325766833504 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 39.5 2 58.5 3 86.5 4 77.0 5 85.0 6 141.0 7 305.5 8 466.0 9 479.5 10 404.0 11 339.5 12 350.0 13 386.5 14 411.0 15 441.0 16 489.5 17 551.5 18 637.0 19 739.5 20 815.5 21 948.0 22 1140.0 23 1352.5 24 1648.0 25 2119.0 26 2889.5 27 4076.5 28 5963.5 29 8672.5 30 12644.5 31 18346.5 32 26407.0 33 32964.0 34 37821.5 35 44721.5 36 53426.5 37 62169.5 38 69756.5 39 77157.5 40 83211.0 41 88098.0 42 93467.5 43 99792.0 44 105789.0 45 112252.0 46 117682.5 47 121559.5 48 124669.0 49 126370.5 50 125904.5 51 123856.5 52 121178.5 53 118684.5 54 115302.0 55 108820.0 56 99441.0 57 88050.0 58 78845.0 59 68636.0 60 55950.0 61 45062.0 62 36496.5 63 27820.5 64 19459.5 65 13689.0 66 9816.0 67 7168.0 68 5212.0 69 3766.5 70 2736.5 71 1888.5 72 1296.5 73 898.0 74 596.5 75 381.0 76 236.0 77 138.5 78 82.5 79 47.5 80 39.5 81 30.5 82 19.5 83 15.5 84 8.0 85 7.0 86 9.0 87 5.0 88 5.0 89 6.0 90 3.0 91 1.5 92 1.5 93 2.5 94 2.0 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17508487086959998 2 7.076995588908649E-5 3 0.010933958184863864 4 0.00555544153729329 5 0.02476948456118027 6 0.0020523287207835084 7 0.0 8 0.0 9 0.0 10-11 0.05320131433962077 12-13 2.476948456118027E-4 14-15 0.005254669224764672 16-17 0.0 18-19 0.0015569390295599027 20-21 2.653873345840744E-4 22-23 1.769248897227162E-5 24-25 4.953896912236054E-4 26-27 0.0026715658348130155 28-29 0.00490081944531924 30-31 0.016489399722157155 32-33 0.011393962898142925 34-35 0.010403183515695715 36-37 0.003803885129038399 38-39 1.769248897227162E-5 40-41 0.0032023405039811634 42-43 0.009076246842775342 44-45 0.006988533144047291 46-47 0.0033438804157593367 48-49 0.008527779684634923 50-51 0.002441563478173484 52-53 0.001840018853116249 54-55 0.004122349930539289 56-57 0.007890850081633144 58-59 0.015587082784571299 60-61 0.007483922835270896 62-63 0.021974071303561354 64-65 0.04055118472444656 66-67 0.06040215735133532 68-69 0.05052974850480776 70-71 0.06868224219035844 72-73 0.0341641962054565 74-75 0.02726412550627057 76-77 0.234620096261294 78-79 0.08986015149016757 80-81 0.06735530551743807 82-83 0.027724130219549635 84-85 0.051184370596781804 86-87 0.06862916472344162 88-89 0.2953230259251579 90-91 0.30038307777122764 92-93 0.056474424799491024 94-95 0.009553944045026677 96-97 0.01567554522943266 98-99 8.315469816967663E-4 100-101 1.592324007504446E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2826058.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.058802046738315 #Duplication Level Percentage of deduplicated Percentage of total 1 78.06805964487825 46.886741403847026 2 12.440510264925907 14.943242867232021 3 3.969417468367084 7.151953739205716 4 1.7510397546417737 4.2066139999999805 5 0.9811245527952724 2.946258264976296 6 0.5811025544322006 2.094019397129851 7 0.4116351486517024 1.7305619735846611 8 0.3026166186301099 1.453983327548726 9 0.21983377420113667 1.1882657815140094 >10 1.2045703415687656 12.838847974651033 >50 0.05404382478665877 2.2030940491193522 >100 0.014449406347525926 1.4654681183055933 >500 9.461604585384138E-4 0.4024294142329723 >1k 6.504853151399348E-4 0.4885196886527273 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.538497794454325E-5 0.0 5 0.0 0.0 0.0 3.538497794454325E-5 0.0 6 0.0 0.0 0.0 3.538497794454325E-5 3.538497794454325E-5 7 0.0 0.0 0.0 3.538497794454325E-5 3.538497794454325E-5 8 0.0 0.0 0.0 3.538497794454325E-5 3.538497794454325E-5 9 0.0 0.0 0.0 7.07699558890865E-5 3.538497794454325E-5 10-11 0.0 0.0 0.0 7.07699558890865E-5 3.538497794454325E-5 12-13 0.0 0.0 0.0 1.2384742280590136E-4 3.538497794454325E-5 14-15 0.0 0.0 0.0 1.41539911778173E-4 8.846244486135813E-5 16-17 0.0 0.0 0.0 1.41539911778173E-4 1.0615493383362974E-4 18-19 0.0 0.0 0.0 1.7692488972271625E-4 1.41539911778173E-4 20-21 0.0 0.0 0.0 2.476948456118027E-4 1.41539911778173E-4 22-23 0.0 0.0 0.0 3.7154226841770407E-4 1.9461737869498787E-4 24-25 0.0 0.0 0.0 6.192371140295069E-4 2.83079823556346E-4 26-27 0.0 0.0 0.0 0.001079241827308569 3.184648015008892E-4 28-29 0.0 0.0 0.0 0.0036977301952047697 3.3615729047316084E-4 30-31 0.0 3.538497794454325E-5 0.0 0.01622401238757308 3.5384977944543245E-4 32-33 0.0 3.538497794454325E-5 0.0 0.04635432110735166 3.5384977944543245E-4 34-35 0.0 3.538497794454325E-5 0.0 0.08641011614057462 3.5384977944543245E-4 36-37 0.0 3.538497794454325E-5 0.0 0.1515007830695619 3.5384977944543245E-4 38-39 0.0 3.538497794454325E-5 0.0 0.25753186948038576 3.5384977944543245E-4 40-41 0.0 3.538497794454325E-5 0.0 0.3789377288081136 3.5384977944543245E-4 42-43 0.0 3.538497794454325E-5 0.0 0.5035105436618781 3.7154226841770407E-4 44-45 0.0 3.538497794454325E-5 0.0 0.6591867541288962 3.8923475738997574E-4 46-47 0.0 3.538497794454325E-5 0.0 0.841295543120488 4.0692724636224735E-4 48-49 0.0 3.538497794454325E-5 0.0 1.0293667008957352 4.600047132790622E-4 50-51 0.0 3.538497794454325E-5 0.0 1.2267264153814252 4.953896912236054E-4 52-53 0.0 3.538497794454325E-5 0.0 1.4244045946686161 4.953896912236054E-4 54-55 0.0 3.538497794454325E-5 0.0 1.653345401969811 4.953896912236054E-4 56-57 0.0 3.538497794454325E-5 0.0 1.9205373704290571 4.953896912236054E-4 58-59 0.0 3.538497794454325E-5 0.0 2.1961332711501322 4.953896912236054E-4 60-61 0.0 3.538497794454325E-5 0.0 2.4874931795455013 5.130821801958771E-4 62-63 0.0 3.538497794454325E-5 0.0 2.7827277430257977 6.015446250572352E-4 64-65 0.0 3.538497794454325E-5 0.0 3.108411080027374 6.015446250572352E-4 66-67 0.0 3.538497794454325E-5 0.0 3.4862872594971512 6.015446250572352E-4 68-69 0.0 3.538497794454325E-5 0.0 3.8988053323746366 6.192371140295069E-4 70-71 0.0 3.538497794454325E-5 0.0 4.3292989740479495 6.369296030017784E-4 72-73 0.0 3.538497794454325E-5 0.0 4.770142721770041 7.253920478631366E-4 74-75 0.0 3.538497794454325E-5 0.0 5.2349774845385335 7.430845368354082E-4 76-77 0.0 3.538497794454325E-5 0.0 5.754181265918817 7.784695147799515E-4 78-79 0.0 3.538497794454325E-5 0.0 6.325170962520939 8.138544927244947E-4 80-81 0.0 3.538497794454325E-5 0.0 6.917108566066231 8.492394706690379E-4 82-83 0.0 3.538497794454325E-5 0.0 7.534788741066178 9.200094265581244E-4 84-85 0.0 3.538497794454325E-5 0.0 8.175858386487468 9.200094265581244E-4 86-87 0.0 3.538497794454325E-5 0.0 8.864184669953696 9.377019155303961E-4 88-89 0.0 3.538497794454325E-5 0.0 9.603960711351288 9.553944045026677E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2605 0.0 51.452206 1 GTATCAA 4605 0.0 42.007557 1 TCAACGC 5715 0.0 32.549767 4 TATCAAC 5985 0.0 31.318115 2 CAACGCA 5955 0.0 31.268373 5 ATCAACG 6070 0.0 30.80138 3 AACGCAG 6425 0.0 29.12374 6 GTACATG 8690 0.0 27.401896 1 TACATGG 8900 0.0 26.232384 2 ACATGGG 9170 0.0 25.097767 3 ACGCAGA 7535 0.0 24.202728 7 CGCAGAG 7715 0.0 23.330263 8 TAGATCG 165 2.4316087E-6 23.030695 5 CATGGGG 7365 0.0 22.937986 4 TAAGGTG 1340 0.0 19.4966 5 ATGGGGG 4185 0.0 19.181927 5 GCAGAGT 9040 0.0 18.597685 9 AGAGTAC 7370 0.0 18.268784 10-11 GTAAGGT 1180 0.0 17.292767 4 CGTACAC 480 1.8189894E-12 16.80623 3 >>END_MODULE