##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921674_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2275842 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.94904347489852 31.0 31.0 34.0 26.0 34.0 2 29.99534106497727 31.0 31.0 34.0 25.0 34.0 3 30.05388027815639 31.0 31.0 34.0 25.0 34.0 4 33.49878550444187 37.0 35.0 37.0 28.0 37.0 5 33.49365158038212 37.0 35.0 37.0 28.0 37.0 6 33.53649154906184 37.0 35.0 37.0 28.0 37.0 7 33.43865742876702 37.0 35.0 37.0 27.0 37.0 8 33.40391951638119 37.0 35.0 37.0 27.0 37.0 9 34.90721675757808 39.0 35.0 39.0 27.0 39.0 10-11 34.795360793939125 39.0 35.0 39.0 27.0 39.0 12-13 34.67763667249308 39.0 35.0 39.0 27.0 39.0 14-15 35.76214956925833 40.0 36.0 41.0 27.0 41.0 16-17 35.6951585391253 40.0 36.0 41.0 27.0 41.0 18-19 35.666403247677124 40.0 36.0 41.0 26.5 41.0 20-21 35.586134494398124 40.0 36.0 41.0 26.0 41.0 22-23 35.48604230873672 40.0 36.0 41.0 25.0 41.0 24-25 35.37488894220249 40.0 36.0 41.0 25.0 41.0 26-27 35.22262639497821 39.5 35.0 41.0 24.0 41.0 28-29 35.07695657255644 39.0 35.0 41.0 24.0 41.0 30-31 34.929494666149935 39.0 35.0 41.0 23.5 41.0 32-33 34.74469646838401 39.0 35.0 41.0 22.5 41.0 34-35 34.57075469210956 39.0 34.0 41.0 21.5 41.0 36-37 34.532257511725334 39.0 34.5 41.0 21.0 41.0 38-39 34.708556437573435 39.0 35.0 41.0 21.5 41.0 40-41 34.76613007405611 39.5 35.0 41.0 21.5 41.0 42-43 34.6028408386874 39.0 35.0 41.0 18.5 41.0 44-45 34.47815775436081 39.0 35.0 41.0 17.0 41.0 46-47 34.318239798720654 39.0 34.0 41.0 15.0 41.0 48-49 34.14618611485332 39.0 34.0 41.0 13.5 41.0 50-51 32.48539463635876 37.0 32.0 39.5 10.5 40.0 52-53 32.602355084403925 37.5 32.0 39.5 8.0 40.0 54-55 33.5081930116414 38.0 33.0 40.0 8.0 41.0 56-57 33.53885397140927 38.0 33.0 41.0 7.5 41.0 58-59 33.35800661908867 38.0 33.0 40.0 4.0 41.0 60-61 33.11398462634928 38.0 33.0 40.0 2.0 41.0 62-63 32.82980936286438 37.0 33.0 40.0 2.0 41.0 64-65 32.550804493457804 37.0 32.5 40.0 2.0 41.0 66-67 32.21620437622647 36.0 32.0 39.5 2.0 41.0 68-69 31.85769926031772 36.0 32.0 39.0 2.0 41.0 70-71 31.451073492799587 35.0 32.0 39.0 2.0 40.5 72-73 31.097483920236993 35.0 31.0 37.5 2.0 40.0 74-75 30.70209794880312 35.0 31.0 37.0 2.0 39.0 76-77 30.325891472255105 35.0 31.0 36.5 2.0 39.0 78-79 29.97756544610742 35.0 31.0 36.0 2.0 38.5 80-81 29.661174853087342 35.0 30.0 36.0 2.0 37.0 82-83 29.34311059379342 35.0 30.0 35.0 2.0 37.0 84-85 29.076380302323273 35.0 30.0 35.0 2.0 36.5 86-87 28.84052407856081 34.0 30.0 35.0 2.0 36.0 88-89 28.616293222464478 34.0 29.5 35.0 2.0 36.0 90-91 28.381220225305622 34.0 29.0 35.0 2.0 35.5 92-93 28.181750095129626 34.0 29.0 35.0 2.0 35.0 94-95 27.946541324046223 34.0 29.0 35.0 2.0 35.0 96-97 27.705969702641923 34.0 29.0 35.0 2.0 35.0 98-99 27.41768826658441 34.0 29.0 35.0 2.0 35.0 100-101 26.34901544131798 33.0 25.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 95850.0 3 15821.0 4 10534.0 5 7962.0 6 6931.0 7 7317.0 8 7860.0 9 8194.0 10 8915.0 11 9660.0 12 9428.0 13 9675.0 14 10027.0 15 10653.0 16 11099.0 17 11809.0 18 11266.0 19 10259.0 20 10509.0 21 11040.0 22 12379.0 23 13589.0 24 16016.0 25 18991.0 26 22474.0 27 26499.0 28 30711.0 29 35947.0 30 43166.0 31 52090.0 32 64010.0 33 82653.0 34 112531.0 35 161466.0 36 264083.0 37 462086.0 38 483329.0 39 88996.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.92249443970859 17.846963722588168 11.95870414765426 25.271837690048983 2 16.02721588593003 19.09513731287759 39.380804735736525 25.496842065455848 3 19.639715539905627 23.1540456151012 29.008272348598606 28.19796649639456 4 13.004515853856944 14.937450807093452 36.75905039552197 35.29898294352764 5 13.837182051499644 37.35340039845104 34.82722429293846 13.982193257110847 6 34.25479285067997 35.374746938099314 16.50563426639404 13.864825944826684 7 29.492506958671598 31.507511498177603 20.64332666250069 18.356654880650105 8 26.922923107686152 35.10748399770595 19.50932890345008 18.460263991157813 9 26.623573793615606 15.428098105861702 19.19998418072641 38.748343919796284 10-11 25.804520873378106 25.14068953030834 27.797904532386937 21.256885063926614 12-13 26.10122398141273 22.57831369251057 27.682935217258404 23.637527108818297 14-15 23.06382221167255 24.320200092089834 24.68805392640066 27.927923769836955 16-17 23.40613962008818 27.643717350950244 25.679417784113625 23.27072524484796 18-19 23.477326583546738 26.719047823072977 27.07736657251681 22.726259020863477 20-21 23.614912933177905 26.107015996035877 27.18416371573004 23.09390735505618 22-23 23.51946869707443 26.01589618687558 26.818397801153488 23.6462373148965 24-25 23.37602713579082 26.3490919975658 26.87037117213421 23.404509694509173 26-27 23.18862012612808 26.4512101356012 26.868106525245945 23.49206321302478 28-29 23.4163433802604 26.39643028527132 26.838272130104396 23.348954204363885 30-31 23.550401819310398 26.273676578026556 26.64369091498349 23.532230687679558 32-33 23.2543357211393 26.416825540024767 26.604045991942115 23.724792746893815 34-35 23.745270196934694 26.434803968310817 26.628368316262613 23.191557518491877 36-37 23.845124635847142 26.12354613481675 26.599438446632657 23.431890782703455 38-39 23.498312869080486 26.44561787572223 26.64170647393373 23.414362781263552 40-41 23.641901301926623 26.258211602457926 26.82851166360074 23.27137543201471 42-43 23.501325255251473 26.142366503325693 26.641286127409487 23.71502211401335 44-45 23.450871164823013 26.269894664170497 26.76493871994336 23.514295451063134 46-47 23.761360011219384 26.294197513550333 26.43725786463162 23.507184610598664 48-49 23.44650761865025 26.519243958637684 26.33535271692044 23.698895705791628 50-51 23.51808921207958 26.502341371270816 26.473302643426877 23.506266773222727 52-53 23.787170894743564 26.234340116163864 26.520742603250653 23.457746385841922 54-55 23.228535937863963 26.289873655723405 26.851868568134897 23.62972183827774 56-57 23.32350417630923 26.466948294436133 26.636039444914267 23.573508084340375 58-59 23.360608540770897 26.17072337760738 26.806308154135415 23.662359927486307 60-61 23.25972948405372 26.44024285835083 26.844470947193372 23.455556710402075 62-63 23.338961552780905 26.26214967746538 26.87161781182842 23.527270957925296 64-65 23.074568971306146 26.133783415745942 26.893847907400797 23.897799705547115 66-67 23.081314477419447 26.29232243982621 26.74110223170194 23.8852608510524 68-69 23.345130452241484 26.073320605712635 26.90198822108018 23.679560720965704 70-71 23.216801504643897 25.98933770309347 26.791035182321842 24.002825609940793 72-73 23.189640273831763 26.2038591388984 26.69822255930765 23.90827802796219 74-75 23.083292384157865 26.350442163032316 26.737654043753096 23.828611409056723 76-77 23.185812576417135 25.968574147022938 26.92384064993257 23.92177262662735 78-79 23.124410451619383 25.954110566908845 26.863963720370656 24.057515261101127 80-81 23.239415064079623 26.177725583426394 26.669341468135695 23.91351788435829 82-83 23.24670096904286 26.1656106273653 26.782960911938787 23.804727491653054 84-85 23.10167973301837 26.14816106623544 26.799739113355336 23.95042008739086 86-87 23.072906297185728 26.232555045976625 26.764999445003358 23.929539211834292 88-89 23.001155061183006 26.03875676217301 26.72738904420614 24.23269913243784 90-91 23.051732818385197 26.042248005846027 26.847992367397406 24.058026808371373 92-93 23.205500587898346 25.802934360417474 27.054753718052364 23.936811333631816 94-95 23.023722814213425 25.56404340564083 27.152178739058737 24.260055041087007 96-97 23.113845440913984 25.304143165996223 27.201332247941544 24.380679145148246 98-99 22.86212141934202 25.373765777337017 27.182354973812995 24.581757829507968 100-101 23.049593764708394 25.222576502379003 27.282021712427834 24.44580802048477 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 21.0 2 35.5 3 55.0 4 50.5 5 58.0 6 112.5 7 231.5 8 367.0 9 439.0 10 425.5 11 396.0 12 420.0 13 504.0 14 594.0 15 661.5 16 748.0 17 793.0 18 875.0 19 963.0 20 1033.5 21 1198.5 22 1387.0 23 1593.0 24 1907.0 25 2378.5 26 3165.5 27 4344.5 28 5878.0 29 8154.0 30 11479.5 31 16375.5 32 24106.5 33 29905.0 34 34163.5 35 40645.5 36 49402.0 37 57622.0 38 62910.0 39 68465.5 40 71605.5 41 73438.0 42 76503.5 43 79550.0 44 83105.0 45 88037.5 46 90348.5 47 90587.5 48 92177.0 49 92747.0 50 92109.5 51 90786.0 52 89638.5 53 88954.0 54 87608.5 55 83313.0 56 76709.0 57 70089.0 58 63749.0 59 55597.0 60 45759.0 61 37739.0 62 31418.5 63 23921.5 64 16938.5 65 12437.0 66 9276.0 67 7161.5 68 5400.0 69 3950.0 70 2941.0 71 2153.0 72 1581.5 73 1200.0 74 902.5 75 654.5 76 472.0 77 330.0 78 226.0 79 154.0 80 119.5 81 99.5 82 73.5 83 60.5 84 53.0 85 44.5 86 34.5 87 32.5 88 27.0 89 17.0 90 24.5 91 25.0 92 18.5 93 17.0 94 13.5 95 12.0 96 9.0 97 4.5 98 3.0 99 3.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054089870913710175 2 0.07597188205508115 3 0.07201730172832736 4 0.07170972325846874 5 0.06744756446185632 6 0.009359173439983971 7 0.01160010229181112 8 0.0170046954050413 9 0.006019750052947436 10-11 0.01160010229181112 12-13 0.022914596004467797 14-15 0.03908443556274996 16-17 0.026517658079954584 18-19 0.009425083112096534 20-21 0.019091835021939133 22-23 0.03651395835036 24-25 0.03363590266811141 26-27 0.020058510212923392 28-29 0.011160704477727363 30-31 0.011182674368431551 32-33 0.00801901010702852 34-35 0.004965195299146426 36-37 5.272773769005054E-4 38-39 0.003734881419711913 40-41 9.886450816884475E-4 42-43 0.23446267359509143 44-45 0.20344118792077834 46-47 0.20970260677147184 48-49 0.21682085135962867 50-51 0.2081427445314745 52-53 0.21583220627794023 54-55 0.21200944529541155 56-57 0.21431628381935125 58-59 0.22402697551060224 60-61 0.22927777938890312 62-63 0.21291021081428324 64-65 0.21312990972132512 66-67 0.2106912518531603 68-69 0.20502302005147985 70-71 0.19658658202107177 72-73 0.20825259398499543 74-75 0.2080109251872494 76-77 0.2017275364458517 78-79 0.22128073917257873 80-81 0.23149673835002604 82-83 0.23072779217537948 84-85 0.2251474399365158 86-87 0.24421730506775075 88-89 0.23725284971452326 90-91 0.24522792004014338 92-93 0.24019681506888438 94-95 0.24333850943958324 96-97 0.2501931153392898 98-99 0.24327259976747068 100-101 0.24902871113196787 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2275842.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.8595096819159 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1525919630912 47.978948546453125 2 11.248149910231755 13.466174769103183 3 3.5429936603241154 6.36245589939414 4 1.611047162053837 3.857459727799391 5 0.8605234250155067 2.5755255145615576 6 0.5601236915686247 2.011723772311354 7 0.3727252836823021 1.5617806909092928 8 0.2569525455680713 1.230484271137992 9 0.19489390764956105 1.049962837670579 >10 1.0888433386194258 11.75121634506257 >50 0.07459080518796161 3.0702433555173467 >100 0.033986899476362104 3.6489780017635933 >500 0.0016200847339244778 0.6555677500352662 >1k 9.573227973186309E-4 0.7794785182806656 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.393978140837545E-5 2 0.0 0.0 0.0 0.0 4.393978140837545E-5 3 0.0 0.0 0.0 0.0 4.393978140837545E-5 4 0.0 0.0 0.0 0.0 4.393978140837545E-5 5 0.0 0.0 0.0 0.0 4.393978140837545E-5 6 0.0 0.0 0.0 0.0 4.393978140837545E-5 7 0.0 0.0 0.0 0.0 4.393978140837545E-5 8 0.0 0.0 0.0 0.0 4.393978140837545E-5 9 0.0 0.0 0.0 0.0 8.78795628167509E-5 10-11 0.0 0.0 0.0 4.393978140837545E-5 8.78795628167509E-5 12-13 0.0 0.0 0.0 4.393978140837545E-5 1.757591256335018E-4 14-15 2.1969890704187726E-5 0.0 0.0 4.393978140837545E-5 1.757591256335018E-4 16-17 4.393978140837545E-5 0.0 0.0 4.393978140837545E-5 1.757591256335018E-4 18-19 6.590967211256318E-5 0.0 0.0 4.393978140837545E-5 1.757591256335018E-4 20-21 8.78795628167509E-5 0.0 0.0 6.590967211256318E-5 1.757591256335018E-4 22-23 8.78795628167509E-5 0.0 0.0 8.78795628167509E-5 2.1969890704187726E-4 24-25 8.78795628167509E-5 0.0 0.0 1.3181934422512636E-4 3.0757846985862816E-4 26-27 8.78795628167509E-5 0.0 0.0 3.7348814197119137E-4 3.0757846985862816E-4 28-29 8.78795628167509E-5 0.0 0.0 0.0025924471030941516 3.0757846985862816E-4 30-31 8.78795628167509E-5 0.0 0.0 0.012325108685049314 3.2954836056281586E-4 32-33 1.3181934422512636E-4 0.0 0.0 0.03339423387036534 3.9545803267537907E-4 34-35 1.3181934422512636E-4 0.0 0.0 0.06160357353454238 4.8333759549212997E-4 36-37 1.3181934422512636E-4 0.0 0.0 0.10604866242911415 4.8333759549212997E-4 38-39 1.3181934422512636E-4 0.0 0.0 0.18019704355574773 5.272773769005054E-4 40-41 1.3181934422512636E-4 0.0 0.0 0.2668243226023599 5.272773769005054E-4 42-43 1.3181934422512636E-4 0.0 0.0 0.3548137348726318 5.272773769005054E-4 44-45 1.3181934422512636E-4 0.0 0.0 0.4603351199248454 5.272773769005054E-4 46-47 1.3181934422512636E-4 0.0 0.0 0.5867938108181499 5.712171583088808E-4 48-49 1.3181934422512636E-4 0.0 0.0 0.7274889908877682 6.151569397172563E-4 50-51 1.3181934422512636E-4 0.0 0.0 0.8790153270745509 7.030365025340072E-4 52-53 1.3181934422512636E-4 0.0 0.0 1.0299045364309123 8.348558467591335E-4 54-55 1.3181934422512636E-4 0.0 0.0 1.2005007377489298 8.78795628167509E-4 56-57 1.3181934422512636E-4 0.0 0.0 1.396560042393101 8.78795628167509E-4 58-59 1.3181934422512636E-4 0.0 0.0 1.6079982705302038 8.78795628167509E-4 60-61 1.3181934422512636E-4 0.0 0.0 1.840923051776002 8.78795628167509E-4 62-63 1.3181934422512636E-4 0.0 0.0 2.0841517117620643 8.78795628167509E-4 64-65 1.5378923492931408E-4 0.0 0.0 2.3408039749683853 9.227354095758844E-4 66-67 1.757591256335018E-4 0.0 0.0 2.631970936470985 9.227354095758844E-4 68-69 1.757591256335018E-4 0.0 0.0 2.9458987047431235 9.227354095758844E-4 70-71 1.757591256335018E-4 0.0 0.0 3.290122952296337 9.227354095758844E-4 72-73 1.757591256335018E-4 0.0 0.0 3.6510662866754373 0.0011424343166177616 74-75 1.757591256335018E-4 0.0 0.0 4.011636132912566 0.0011424343166177616 76-77 1.757591256335018E-4 0.0 0.0 4.411641932963711 0.0011424343166177616 78-79 2.1969890704187726E-4 0.0 0.0 4.866792158682369 0.0011424343166177616 80-81 2.1969890704187726E-4 0.0 0.0 5.356259353680967 0.0012083439887303248 82-83 2.1969890704187726E-4 0.0 0.0 5.858249386380953 0.0013181934422512634 84-85 2.1969890704187726E-4 0.0 0.0 6.368412218422896 0.0013181934422512634 86-87 2.1969890704187726E-4 0.0 0.0 6.905114678435497 0.001340163332955451 88-89 2.1969890704187726E-4 0.0 0.0 7.494456996575334 0.001362133223659639 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1605 0.0 47.904305 1 GTATCAA 3180 0.0 39.401375 1 TCAACGC 3480 0.0 34.77727 4 CAACGCA 3630 0.0 33.206528 5 ATCAACG 3815 0.0 31.724133 3 AACGCAG 3835 0.0 31.537188 6 GTACATG 5300 0.0 30.71516 1 TATCAAC 4065 0.0 29.656973 2 TACATGG 5825 0.0 27.540665 2 ACATGGG 5720 0.0 26.966927 3 ACGCAGA 4630 0.0 25.818708 7 CGCAGAG 4815 0.0 24.237198 8 GAGTACA 3850 0.0 22.43599 1 CATGGGG 4375 0.0 22.34723 4 AGTACAT 4225 0.0 19.097471 2 GCAGAGT 5615 0.0 19.011002 9 TATGTCG 205 1.6030895E-5 18.519638 5 AGAGTAC 4615 0.0 18.504723 10-11 TAAGGTG 1140 0.0 17.900286 5 ATGGGGG 2550 0.0 17.866003 5 >>END_MODULE