##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921674_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2275842 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39878163774111 33.0 31.0 34.0 29.0 34.0 2 31.532528180778808 34.0 31.0 34.0 28.0 34.0 3 31.607084323076908 34.0 31.0 34.0 28.0 34.0 4 35.09725279698679 37.0 35.0 37.0 32.0 37.0 5 34.85250557815525 37.0 35.0 37.0 32.0 37.0 6 34.83157310569011 37.0 35.0 37.0 32.0 37.0 7 34.71693992816724 37.0 35.0 37.0 32.0 37.0 8 34.6630737107409 37.0 35.0 37.0 32.0 37.0 9 36.25308391355815 39.0 37.0 39.0 32.0 39.0 10-11 36.145566783634365 39.0 37.0 39.0 32.0 39.0 12-13 36.0723066451889 39.0 37.0 39.0 32.0 39.0 14-15 37.31339851360508 40.0 38.0 41.0 32.0 41.0 16-17 37.28404915631226 40.0 38.0 41.0 31.0 41.0 18-19 37.24878682263531 40.0 38.0 41.0 31.0 41.0 20-21 37.195175236242235 40.0 38.0 41.0 31.0 41.0 22-23 37.10975036931386 40.0 38.0 41.0 31.0 41.0 24-25 37.02728528606116 40.0 37.0 41.0 31.0 41.0 26-27 36.90147778272832 40.0 37.0 41.0 30.0 41.0 28-29 36.783564500523326 40.0 37.0 41.0 30.0 41.0 30-31 36.63011316251304 40.0 37.0 41.0 30.0 41.0 32-33 36.57523830740447 40.0 37.0 41.0 30.0 41.0 34-35 36.702761219803484 40.0 37.0 41.0 30.0 41.0 36-37 36.69854431898172 40.0 37.0 41.0 30.0 41.0 38-39 36.594352332016015 40.0 37.0 41.0 30.0 41.0 40-41 36.511243530965686 40.0 37.0 41.0 30.0 41.0 42-43 36.38414749354305 40.0 36.5 41.0 29.5 41.0 44-45 36.25020036540322 40.0 36.0 41.0 29.0 41.0 46-47 36.08962880551462 40.0 36.0 41.0 28.0 41.0 48-49 35.943696003501124 40.0 36.0 41.0 28.0 41.0 50-51 35.791837262867986 40.0 35.0 41.0 28.0 41.0 52-53 35.62582485954649 39.0 35.0 41.0 27.0 41.0 54-55 35.418242347227974 39.0 35.0 41.0 27.0 41.0 56-57 35.1987743437374 39.0 35.0 41.0 26.0 41.0 58-59 34.9607611161056 38.5 35.0 40.5 26.0 41.0 60-61 34.68827559206659 38.0 34.5 40.0 26.0 41.0 62-63 34.388175453304754 37.5 34.0 40.0 26.0 41.0 64-65 34.057768070015406 37.0 34.0 40.0 25.0 41.0 66-67 33.708098145653345 36.5 34.0 39.5 24.0 41.0 68-69 33.346196704340635 36.0 34.0 39.0 23.0 41.0 70-71 32.95018063644137 35.5 33.0 39.0 22.5 40.0 72-73 32.59040060777505 35.0 33.0 37.5 22.0 40.0 74-75 32.188205947513055 35.0 33.0 37.0 21.0 39.0 76-77 29.47209977669803 33.0 29.0 34.5 15.0 36.5 78-79 31.041218590745757 34.5 31.5 36.0 18.0 38.0 80-81 31.22193192673305 35.0 32.0 36.0 19.0 37.0 82-83 31.037824682029772 35.0 32.0 35.0 18.0 37.0 84-85 30.825595757526223 35.0 32.0 35.0 17.5 36.5 86-87 30.61239005168197 35.0 32.0 35.0 13.5 36.0 88-89 30.335917651576867 35.0 32.0 35.0 7.0 36.0 90-91 30.13129909721325 34.5 31.5 35.0 4.5 35.5 92-93 29.96418490387294 34.0 31.0 35.0 2.0 35.0 94-95 29.851505508730394 34.0 31.0 35.0 2.0 35.0 96-97 29.64608329576482 34.0 31.0 35.0 2.0 35.0 98-99 29.437465122798507 34.0 31.0 35.0 2.0 35.0 100-101 28.32267442115929 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 39108.0 3 13451.0 4 7235.0 5 5209.0 6 4569.0 7 4759.0 8 4982.0 9 5429.0 10 6115.0 11 6447.0 12 7105.0 13 7637.0 14 8124.0 15 9097.0 16 9826.0 17 10604.0 18 9838.0 19 8805.0 20 8354.0 21 8438.0 22 8861.0 23 10028.0 24 11793.0 25 14342.0 26 16949.0 27 20681.0 28 24901.0 29 29998.0 30 36434.0 31 45048.0 32 57307.0 33 75446.0 34 106770.0 35 158190.0 36 277877.0 37 537015.0 38 579705.0 39 79360.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.57918041387761 19.482160022817144 12.572800064789416 26.36585949851583 2 15.152943864559601 20.545909523317814 37.78727368196728 26.51387293015531 3 18.141381560589114 24.27370183444915 28.93881434249642 28.646102262465313 4 12.670864933486428 16.1192529247032 35.65578254788305 35.554099593927326 5 13.519952745232992 37.66480056044716 34.940136050834035 13.875110643485813 6 34.16187932651198 36.0073890694852 16.216098645132206 13.614632958870617 7 29.325761630201043 31.676759634456168 20.652927575815898 18.344551159526894 8 26.76442389234402 35.74813190019343 19.174617570112513 18.312826637350042 9 26.374030523221965 15.46804016625063 19.09004187902406 39.067887431503344 10-11 25.71688633347298 25.38961715506831 27.82669438567076 21.06680212578795 12-13 26.021313079938878 22.757584312553757 27.717088142470942 23.50401446503642 14-15 22.949819453736325 24.48427044918504 24.676889748685312 27.889020348393316 16-17 23.324554165007942 27.89314899716237 25.6185403028857 23.163756534943992 18-19 23.409734786443934 26.90638377806559 26.981456032638963 22.702425402851514 20-21 23.516253049156255 26.250283137899526 27.169110934912005 23.064352878032214 22-23 23.47203804130515 26.119519720613294 26.86146489958442 23.546977338497136 24-25 23.311037413863748 26.464505767682304 26.87117103559035 23.353285782863594 26-27 23.119716632670904 26.561710433461315 26.93481426538839 23.38375866847938 28-29 23.336494236332133 26.571381113941474 26.829343315810682 23.262781333915715 30-31 23.5097881825475 26.42632401563894 26.62645818551611 23.437429616297443 32-33 23.18870513125873 26.54966949114556 26.576805406265297 23.684819971330413 34-35 23.58782503764906 26.576833312752875 26.65307623721173 23.182265412386332 36-37 23.678527047715132 26.299875733602374 26.646178237034203 23.375418981648295 38-39 23.412565547168914 26.526621795361894 26.677115546685577 23.383697110783615 40-41 23.566477492308636 26.325767604013855 26.798091983514126 23.309662920163383 42-43 23.437123732886164 26.300884496872097 26.582519058341287 23.679472711900456 44-45 23.347520896848533 26.404599547743953 26.770201019289875 23.477678536117647 46-47 23.66640558143827 26.45005014813749 26.43199022742977 23.451554042994474 48-49 23.355824377819665 26.616282449844476 26.38911623575982 23.638776936576043 50-51 23.454605014400524 26.61601895257703 26.467081365972323 23.462294667050124 52-53 23.74954494054073 26.38701134523376 26.41535300859939 23.44809070562613 54-55 23.15691715088528 26.437248804842195 26.741786372861114 23.66404767141141 56-57 23.25905858597843 26.58047236586108 26.52180838850933 23.63866065965116 58-59 23.189936277741154 26.355526257965284 26.726257965282358 23.728279499011208 60-61 23.147116912267627 26.606198200842694 26.73451169355574 23.512173193333936 62-63 23.24501985509549 26.398124604870304 26.81768449439111 23.539171045643098 64-65 22.93859993261362 26.295896530041112 26.794898591853283 23.97060494549198 66-67 22.95232892612308 26.500658938202697 26.580039283488517 23.96697285218571 68-69 23.220114146042313 26.28343959194933 26.696040277528965 23.800405984479394 70-71 23.109279908049977 26.20443665882682 26.59418655318894 24.092096879934253 72-73 23.056558807718865 26.41128899332381 26.470978651057692 24.06117354789963 74-75 22.981658150326517 26.54208314397552 26.47145304614822 24.004805659549746 76-77 22.98932707198793 26.2238172612574 26.677651766464383 24.10920390029029 78-79 22.986520217914055 26.23337455429469 26.617424329045296 24.162680898745954 80-81 23.086139627975015 26.421134251681757 26.36096285663973 24.1317632637035 82-83 23.1498585866577 26.40236545954392 26.46077675151467 23.98699920228371 84-85 22.93842702477664 26.420692465719398 26.447839105492942 24.19304140401102 86-87 22.900060018071375 26.502287501951137 26.439763181441446 24.15788929853604 88-89 22.796968380307074 26.36025403629871 26.349039035254325 24.493738548139895 90-91 22.77601423992547 26.399015826889183 26.438568727075296 24.386401206110055 92-93 22.887898251583774 26.195974729956077 26.636595841961107 24.279531176499034 94-95 22.685666123523713 25.888210106677494 26.762885583157995 24.663238186640793 96-97 22.743514854704973 25.70823745730624 26.78839186678315 24.75985582120564 98-99 22.52352720829502 25.830595312244252 26.694656547248304 24.95122093221242 100-101 22.489684024221397 25.827595888812873 26.728780023542964 24.953940063422763 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 22.0 2 28.5 3 45.5 4 46.0 5 46.5 6 94.0 7 202.5 8 308.0 9 351.0 10 314.5 11 266.5 12 259.5 13 292.5 14 334.5 15 367.0 16 398.5 17 444.5 18 523.5 19 617.0 20 713.5 21 845.0 22 1015.5 23 1236.5 24 1612.5 25 2217.0 26 2990.5 27 4142.0 28 5830.0 29 8250.5 30 11841.0 31 16782.0 32 24914.5 33 30939.5 34 34811.5 35 41328.0 36 49836.5 37 57573.0 38 63063.5 39 68629.5 40 72232.0 41 74263.0 42 76914.5 43 80081.5 44 83614.0 45 88522.0 46 91045.5 47 91614.0 48 93145.5 49 93445.0 50 92755.0 51 91551.5 52 90254.5 53 89743.0 54 88434.5 55 83899.5 56 77310.0 57 70024.5 58 63282.5 59 55110.0 60 45199.5 61 37272.0 62 30390.5 63 22828.5 64 15950.5 65 11311.0 66 8399.0 67 6496.5 68 4908.5 69 3509.5 70 2557.0 71 1830.5 72 1310.5 73 955.5 74 720.0 75 535.0 76 361.5 77 214.0 78 107.5 79 64.5 80 45.5 81 31.0 82 17.0 83 9.5 84 5.5 85 7.0 86 6.5 87 2.5 88 1.0 89 0.0 90 0.0 91 1.0 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16987119492477948 2 3.0757846985862816E-4 3 0.009974330379701227 4 0.006195509178580938 5 0.022672927206721732 6 0.0021091095076020217 7 0.0 8 0.0 9 4.393978140837545E-5 10-11 0.04872921758188837 12-13 4.1742792337956676E-4 14-15 0.0048114060642171115 16-17 0.0 18-19 0.001515922458588953 20-21 3.2954836056281586E-4 22-23 0.0 24-25 6.371268304214441E-4 26-27 0.0029879051357695305 28-29 0.005316713550413429 30-31 0.016191809448986353 32-33 0.011424343166177617 34-35 0.009710691691250975 36-37 0.0037788212011202887 38-39 0.0 40-41 0.003317453496332346 42-43 0.008700076718858338 44-45 0.006151569397172564 46-47 0.0037129115290077254 48-49 0.0085902272653374 50-51 0.002482597649573213 52-53 0.0017795611470392055 54-55 0.004240188905908231 56-57 0.007447792948719638 58-59 0.015027405241664404 60-61 0.007272033823086136 62-63 0.021157004748132778 64-65 0.03961171293965047 66-67 0.05929673501060267 68-69 0.04941028419371819 70-71 0.06867787834129083 72-73 0.03255937802360621 74-75 0.026715387096292273 76-77 0.2280694354001728 78-79 0.08427650074126411 80-81 0.06615134091030925 82-83 0.02623204950080014 84-85 0.05092620665230715 86-87 0.06709604621058932 88-89 0.28824496603894295 90-91 0.2956707890969584 92-93 0.053255015066951045 94-95 0.008700076718858338 96-97 0.0146758869903974 98-99 8.568257374633213E-4 100-101 1.3181934422512636E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2275842.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.394068991475066 #Duplication Level Percentage of deduplicated Percentage of total 1 79.05329854344109 46.16243769149374 2 11.843929785420237 13.832305060400316 3 3.7243146870882633 6.5243366635138775 4 1.7147637560737208 4.005281323049991 5 0.9161195156205797 2.6747973099792426 6 0.5652913394126171 1.9805796884366227 7 0.3948948974920417 1.6141663921972231 8 0.2828529306537728 1.3213546837629857 9 0.21834879130466045 1.1475246945284578 >10 1.1681139136662368 12.268711013433542 >50 0.07804269014185986 3.1074058263073674 >100 0.037388592228966774 3.9034481408389032 >500 0.0017352234710069298 0.7180102258747527 >1k 9.053339848730215E-4 0.7396412861829458 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.393978140837545E-5 0.0 3 0.0 0.0 0.0 4.393978140837545E-5 0.0 4 0.0 0.0 0.0 4.393978140837545E-5 0.0 5 0.0 0.0 0.0 4.393978140837545E-5 0.0 6 0.0 0.0 0.0 4.393978140837545E-5 0.0 7 0.0 0.0 0.0 4.393978140837545E-5 0.0 8 0.0 0.0 0.0 4.393978140837545E-5 0.0 9 0.0 0.0 0.0 4.393978140837545E-5 0.0 10-11 0.0 0.0 0.0 4.393978140837545E-5 0.0 12-13 0.0 0.0 0.0 4.393978140837545E-5 8.78795628167509E-5 14-15 0.0 0.0 0.0 4.393978140837545E-5 1.0984945352093863E-4 16-17 0.0 0.0 0.0 4.393978140837545E-5 1.5378923492931408E-4 18-19 0.0 0.0 0.0 4.393978140837545E-5 2.1969890704187726E-4 20-21 0.0 0.0 0.0 6.590967211256318E-5 3.2954836056281586E-4 22-23 0.0 0.0 0.0 8.78795628167509E-5 4.1742792337956676E-4 24-25 2.1969890704187726E-5 0.0 0.0 1.3181934422512636E-4 4.8333759549212997E-4 26-27 4.393978140837545E-5 0.0 0.0 3.7348814197119137E-4 5.272773769005054E-4 28-29 4.393978140837545E-5 0.0 0.0 0.002636386884502527 5.712171583088808E-4 30-31 4.393978140837545E-5 0.0 0.0 0.012412988247866064 5.712171583088808E-4 32-33 4.393978140837545E-5 0.0 0.0 0.03398742091937841 6.151569397172563E-4 34-35 4.393978140837545E-5 0.0 0.0 0.0633611647908774 6.590967211256317E-4 36-37 4.393978140837545E-5 0.0 0.0 0.10890474822065854 6.590967211256317E-4 38-39 8.78795628167509E-5 0.0 0.0 0.18441526257095175 7.030365025340072E-4 40-41 8.78795628167509E-5 0.0 0.0 0.27264634363896967 7.909160653507581E-4 42-43 8.78795628167509E-5 0.0 0.0 0.36237137727487234 8.128859560549459E-4 44-45 8.78795628167509E-5 0.0 0.0 0.46958444391130844 8.348558467591335E-4 46-47 8.78795628167509E-5 0.0 0.0 0.5972734486840475 8.348558467591335E-4 48-49 8.78795628167509E-5 0.0 0.0 0.739418641540142 9.227354095758844E-4 50-51 8.78795628167509E-5 0.0 0.0 0.8914063454317127 9.227354095758844E-4 52-53 8.78795628167509E-5 0.0 0.0 1.044514513749197 0.0010325848630968232 54-55 8.78795628167509E-5 0.0 0.0 1.2166266375258035 0.0010545547538010108 56-57 8.78795628167509E-5 0.0 0.0 1.4154761182894067 0.0010545547538010108 58-59 8.78795628167509E-5 0.0 0.0 1.6298143719994622 0.0010545547538010108 60-61 8.78795628167509E-5 0.0 0.0 1.8656611487089174 0.0010545547538010108 62-63 8.78795628167509E-5 0.0 0.0 2.111240587000328 0.0010984945352093863 64-65 8.78795628167509E-5 0.0 0.0 2.3700458994956595 0.001120464425913574 66-67 8.78795628167509E-5 0.0 0.0 2.6647719832923373 0.0011424343166177616 68-69 1.3181934422512636E-4 0.0 0.0 2.9835111576286932 0.0011424343166177616 70-71 1.3181934422512636E-4 0.0 0.0 3.332239232776265 0.0012303138794345126 72-73 1.3181934422512636E-4 0.0 0.0 3.6969833582471896 0.0013181934422512634 74-75 1.3181934422512636E-4 0.0 0.0 4.064297960930504 0.001362133223659639 76-77 1.3181934422512636E-4 0.0 0.0 4.472081102290932 0.0014060730050680145 78-79 1.3181934422512636E-4 0.0 0.0 4.934371542488451 0.001428042895772202 80-81 1.3181934422512636E-4 0.0 0.0 5.431440319670697 0.0014500127864763897 82-83 1.3181934422512636E-4 0.0 0.0 5.942767555919962 0.0016257719121098916 84-85 1.3181934422512636E-4 0.0 0.0 6.4609493980689345 0.0016257719121098916 86-87 1.3181934422512636E-4 0.0 0.0 7.007560278789125 0.0016257719121098916 88-89 1.3181934422512636E-4 0.0 0.0 7.6083049702044345 0.001669711693518267 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1880 0.0 43.23909 1 GTATCAA 3285 0.0 38.348534 1 TCAACGC 3660 0.0 33.325283 4 CAACGCA 3695 0.0 33.16357 5 ATCAACG 3815 0.0 31.971306 3 AACGCAG 4000 0.0 30.510069 6 TATCAAC 4275 0.0 28.97582 2 GTACATG 6035 0.0 28.82983 1 TACATGG 6335 0.0 26.820555 2 ACGCAGA 4775 0.0 24.961483 7 ACATGGG 6505 0.0 24.80581 3 CGCAGAG 5030 0.0 23.41282 8 CATGGGG 4840 0.0 23.239393 4 TAGGACG 155 3.934474E-5 21.433256 4 GAGTACA 4395 0.0 20.11835 1 ATGGGGG 2705 0.0 19.665579 5 GCAGAGT 5905 0.0 19.3806 9 CCTACAC 1220 0.0 19.061543 3 CTACACG 695 0.0 18.437445 4 TAAACCG 155 9.6340687E-4 18.385506 5 >>END_MODULE