##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921673_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2336287 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43755155081546 33.0 31.0 34.0 29.0 34.0 2 31.57146360870903 34.0 31.0 34.0 29.0 34.0 3 31.646863591673455 34.0 31.0 34.0 28.0 34.0 4 35.13267890460376 37.0 35.0 37.0 33.0 37.0 5 34.89046208791985 37.0 35.0 37.0 32.0 37.0 6 34.87360970634173 37.0 35.0 37.0 32.0 37.0 7 34.756226011615865 37.0 35.0 37.0 32.0 37.0 8 34.70987511380237 37.0 35.0 37.0 32.0 37.0 9 36.29954838596457 39.0 37.0 39.0 32.0 39.0 10-11 36.19619699976929 39.0 37.0 39.0 32.0 39.0 12-13 36.117382196622245 39.0 37.0 39.0 32.0 39.0 14-15 37.37620335172862 40.0 38.0 41.0 32.0 41.0 16-17 37.33977696233383 40.0 38.0 41.0 32.0 41.0 18-19 37.30054783509047 40.0 38.0 41.0 31.0 41.0 20-21 37.24329138500535 40.0 38.0 41.0 31.0 41.0 22-23 37.155565647542446 40.0 38.0 41.0 31.0 41.0 24-25 37.07856055356213 40.0 37.5 41.0 31.0 41.0 26-27 36.95419655205033 40.0 37.0 41.0 30.5 41.0 28-29 36.83645759275295 40.0 37.0 41.0 30.0 41.0 30-31 36.68035883433842 40.0 37.0 41.0 30.0 41.0 32-33 36.63565392436803 40.0 37.0 41.0 30.0 41.0 34-35 36.7673552093557 40.0 37.0 41.0 30.0 41.0 36-37 36.76477718704936 40.0 37.0 41.0 30.0 41.0 38-39 36.66181166954232 40.0 37.0 41.0 30.0 41.0 40-41 36.5807084061162 40.0 37.0 41.0 30.0 41.0 42-43 36.45774620155828 40.0 37.0 41.0 30.0 41.0 44-45 36.33447046531526 40.0 36.5 41.0 29.5 41.0 46-47 36.17606783755592 40.0 36.0 41.0 28.5 41.0 48-49 36.029678930713565 40.0 36.0 41.0 28.0 41.0 50-51 35.87642014872317 40.0 35.5 41.0 28.0 41.0 52-53 35.70595436262754 39.0 35.0 41.0 28.0 41.0 54-55 35.498507032740406 39.0 35.0 41.0 27.0 41.0 56-57 35.27447548182222 39.0 35.0 41.0 27.0 41.0 58-59 35.032333570319054 39.0 35.0 40.5 26.0 41.0 60-61 34.762636396983766 38.0 35.0 40.0 26.0 41.0 62-63 34.460533530341095 37.5 34.0 40.0 26.0 41.0 64-65 34.125347613542345 37.0 34.0 40.0 26.0 41.0 66-67 33.778011862412455 36.5 34.0 39.5 25.0 41.0 68-69 33.41750885058214 36.0 34.0 39.0 24.0 41.0 70-71 33.02180318599555 35.5 33.0 39.0 23.0 40.0 72-73 32.659930265416875 35.0 33.0 37.5 22.5 40.0 74-75 32.25864694705744 35.0 33.0 37.0 21.5 39.0 76-77 29.551150179751033 33.0 29.0 34.5 16.5 36.5 78-79 31.115965418632214 34.5 31.5 36.0 19.0 38.0 80-81 31.295013412307647 35.0 32.0 36.0 20.0 37.0 82-83 31.11694731854434 35.0 32.0 35.0 19.0 37.0 84-85 30.910007845782644 35.0 32.0 35.0 18.0 36.5 86-87 30.69494993551734 35.0 32.0 35.0 17.5 36.0 88-89 30.413826083867264 35.0 32.0 35.0 10.0 36.0 90-91 30.210919506036717 34.5 31.5 35.0 4.5 35.5 92-93 30.04747383348022 34.0 31.0 35.0 2.0 35.0 94-95 29.939350131212475 34.0 31.0 35.0 2.0 35.0 96-97 29.734667444539134 34.0 31.0 35.0 2.0 35.0 98-99 29.53082968830456 34.0 31.0 35.0 2.0 35.0 100-101 28.416281261677184 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 39067.0 3 13486.0 4 7556.0 5 5443.0 6 4764.0 7 4763.0 8 4930.0 9 5342.0 10 5946.0 11 6590.0 12 7057.0 13 7613.0 14 8161.0 15 9030.0 16 9746.0 17 10472.0 18 9670.0 19 8801.0 20 8473.0 21 8408.0 22 8922.0 23 10157.0 24 12042.0 25 14656.0 26 17288.0 27 21026.0 28 25109.0 29 30196.0 30 36848.0 31 45865.0 32 58162.0 33 76673.0 34 108773.0 35 162426.0 36 285816.0 37 555719.0 38 598025.0 39 83265.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11327598292778 18.83071197820313 12.392275059004607 26.663736979864478 2 15.249394016050283 19.96157999694386 37.77624542917104 27.012780557834816 3 18.47400475080939 23.391507703477235 28.832806868767985 29.30168067694539 4 12.861806804936482 15.668553098100855 34.984934659785274 36.48470543717738 5 13.642633840842361 37.38450038146663 34.96345027361989 14.009415504071118 6 35.19256723063337 35.406927943040316 15.801055452565201 13.599449373761102 7 29.71180338716947 31.356935171064173 20.159252694553366 18.772008747212993 8 27.005629017325354 36.08726153935711 18.567410596386487 18.33969884693105 9 26.31385883406398 15.19959457018533 18.5871507169927 39.89939587875799 10-11 26.121071984436213 25.183900320512752 27.4539973522208 21.241030342830236 12-13 26.269454003800913 22.267086992997413 27.528528258599138 23.934930744602532 14-15 22.952067681443143 24.141916321070365 24.37732203368791 28.528693963798585 16-17 23.688549394830343 27.59346347430774 25.249915785175364 23.468071345686553 18-19 23.689231498208564 26.72828526527622 26.568799147866446 23.01368408864877 20-21 23.936728474326706 25.937687263512938 26.768923245501398 23.35666101665896 22-23 23.74175347463732 25.83787865103902 26.497707687454497 23.922660186869166 24-25 23.593143264140476 26.068197538642764 26.571071347856755 23.767587849360005 26-27 23.461214796856126 26.275304700829455 26.4586773711105 23.804803131203915 28-29 23.617224237279828 26.470194804597195 26.27125735956183 23.641323598561144 30-31 23.77529842682699 26.23668830557263 26.24373051085741 23.744282756742965 32-33 23.469830902886507 26.25276404421272 26.290563305307803 23.986841747592972 34-35 23.834320321977756 26.300008304574106 26.337036431396083 23.52863494205205 36-37 23.88692154484995 26.04420595659363 26.403314612056068 23.66555788650035 38-39 23.70442929314763 26.203608546381503 26.406130753627444 23.685831406843423 40-41 23.91703312566788 26.02048318012575 26.38442742399601 23.678056270210355 42-43 23.65304110100375 26.05046944965437 26.32490278078316 23.97158666855872 44-45 23.67245130726942 26.162703343865 26.434927180819212 23.72991816804637 46-47 23.8882634694655 26.13219701995968 26.227201321798983 23.752338188775838 48-49 23.619609447972202 26.32335050456363 26.196107321758948 23.86093272570522 50-51 23.766354896163772 26.37346456487319 26.205201806160105 23.654978732802935 52-53 23.960987832828355 26.16736982478939 26.185218976344736 23.686423366037516 54-55 23.359083027246278 26.159945450086013 26.544714107342283 23.936257415325425 56-57 23.60855017656447 26.26154400328237 26.27796014366584 23.85194567648731 58-59 23.493693905424955 26.160119985213754 26.379002673211318 23.967183436149977 60-61 23.47572173028635 26.286469627870463 26.521217641886853 23.71659099995634 62-63 23.561647647609078 26.1965523810747 26.48169910716388 23.760100864152342 64-65 23.262763166205108 26.123386640090008 26.483498955738515 24.130351237966373 66-67 23.293208638633413 26.327283114971994 26.305655052968408 24.073853193426185 68-69 23.59821913968765 26.05524195629128 26.415752044771168 23.9307868592499 70-71 23.40190097400129 25.998238355661556 26.337546560114237 24.262314110222913 72-73 23.36170589007256 26.208338444589597 26.230389099868702 24.199566565469144 74-75 23.27475813326015 26.24568274773118 26.27173503984053 24.20782407916814 76-77 23.341792960491997 25.98965197128188 26.350709030008513 24.31784603821761 78-79 23.274427722249737 26.06097784570991 26.337006866133528 24.32758756590683 80-81 23.370777854515666 26.12398344603096 26.159447058886514 24.345791640566862 82-83 23.31014581484736 26.183114677067692 26.181487733164072 24.325251774920872 84-85 23.253493484097053 26.11219575073454 26.20720104593614 24.427109719232266 86-87 23.13300250392121 26.236327159621336 26.171651808468443 24.459018527989006 88-89 23.01561101464083 26.143137099180276 26.145841606047792 24.695410280131107 90-91 23.016356156279663 26.117324371698903 26.195329400597682 24.670990071423756 92-93 23.067068365966048 25.958532469979616 26.35567089778509 24.618728266269247 94-95 22.950361428660408 25.756712162465572 26.458893790507286 24.834032618366734 96-97 22.919364525973723 25.542721890856722 26.499117920406924 25.038795662762624 98-99 22.699555615670477 25.616261162042335 26.47466084769457 25.20952237459262 100-101 22.746157624345514 25.592902399431576 26.44883484766932 25.212105128553592 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 9.0 2 15.0 3 26.0 4 26.0 5 30.0 6 56.0 7 103.0 8 195.0 9 246.5 10 208.0 11 185.5 12 201.0 13 206.0 14 231.0 15 299.5 16 335.5 17 384.5 18 464.0 19 526.5 20 635.0 21 761.5 22 950.0 23 1209.5 24 1580.5 25 2285.0 26 3300.5 27 4843.5 28 7093.0 29 9931.5 30 13545.0 31 18309.5 32 25279.5 33 29670.5 34 31658.0 35 35745.5 36 41996.0 37 48820.0 38 54337.5 39 59227.0 40 64371.0 41 69921.0 42 74396.0 43 78480.5 44 83042.5 45 88954.5 46 93250.0 47 96030.0 48 98819.5 49 99947.5 50 100202.5 51 100041.5 52 99874.5 53 99296.0 54 97125.5 55 92161.5 56 85279.0 57 77300.5 58 68914.0 59 59387.0 60 49020.5 61 40346.0 62 32740.5 63 24821.5 64 17659.5 65 12675.5 66 9483.0 67 7456.5 68 5732.5 69 4189.0 70 3069.0 71 2151.5 72 1549.0 73 1162.5 74 865.0 75 626.0 76 425.0 77 237.0 78 124.5 79 76.0 80 44.5 81 27.5 82 18.0 83 15.0 84 13.5 85 10.5 86 7.5 87 3.5 88 2.0 89 1.0 90 2.0 91 1.5 92 1.0 93 1.5 94 0.5 95 1.0 96 1.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1644489739488342 2 1.7121184169581905E-4 3 0.011299981551924057 4 0.00556438485511412 5 0.02418367263953444 6 0.001626512496110281 7 0.0 8 0.0 9 4.280296042395476E-5 10-11 0.04804632307588922 12-13 2.9962072296768334E-4 14-15 0.004601318245575137 16-17 0.0 18-19 0.0014338991742024847 20-21 2.9962072296768334E-4 22-23 0.0 24-25 6.420444063593214E-4 26-27 0.0026109805858612403 28-29 0.005371771533206322 30-31 0.015879898317287217 32-33 0.011235777111288125 34-35 0.009630666095389822 36-37 0.003681054596460109 38-39 0.0 40-41 0.003317229432856494 42-43 0.00858199356500293 44-45 0.006762867746984853 46-47 0.003295827952644517 48-49 0.008945818728606544 50-51 0.0025681776254372858 52-53 0.0017763228575941228 54-55 0.0033386309130684715 56-57 0.0073407077127082415 58-59 0.014231984340964959 60-61 0.007062488469952536 62-63 0.020202997320106646 64-65 0.03871527770346708 66-67 0.05810501877551859 68-69 0.04808912603631318 70-71 0.0657667486914065 72-73 0.03233763660029783 74-75 0.02568177625437286 76-77 0.22321743861092408 78-79 0.08265251657865665 80-81 0.06418303915572016 82-83 0.026516433982639975 84-85 0.049394616329243794 86-87 0.06630178569670593 88-89 0.29285785522069846 90-91 0.2974805749464856 92-93 0.05166317323171339 94-95 0.009010023169242478 96-97 0.014124976939905071 98-99 8.988621689030501E-4 100-101 1.9261332190779643E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2336287.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.618292836602016 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70987468491445 49.28677982152221 2 12.19240534268174 15.269352162611922 3 3.931967659410149 7.3863930696298 4 1.7392707681046764 4.356406651172814 5 0.9534808925480328 2.9852672871838695 6 0.5687885029389667 2.136993902347481 7 0.3909641974319097 1.7137057422392885 8 0.2805922934710816 1.405616832021277 9 0.2046908449774857 1.1535652144594535 >10 0.981244879998411 10.532878409307095 >50 0.034638359602563513 1.4347884303279506 >100 0.010231196227229282 1.1936533092504884 >500 0.0010965201145172955 0.5041952468494381 >1k 7.538575787303642E-4 0.6404039210768631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.280296042395476E-5 0.0 3 0.0 0.0 0.0 4.280296042395476E-5 0.0 4 0.0 0.0 0.0 8.560592084790953E-5 0.0 5 0.0 0.0 0.0 8.560592084790953E-5 0.0 6 0.0 0.0 0.0 8.560592084790953E-5 0.0 7 0.0 0.0 0.0 8.560592084790953E-5 0.0 8 0.0 0.0 0.0 8.560592084790953E-5 0.0 9 0.0 0.0 0.0 8.560592084790953E-5 0.0 10-11 4.280296042395476E-5 0.0 0.0 8.560592084790953E-5 0.0 12-13 4.280296042395476E-5 0.0 0.0 1.284088812718643E-4 4.280296042395476E-5 14-15 4.280296042395476E-5 0.0 0.0 1.4981036148384167E-4 4.280296042395476E-5 16-17 4.280296042395476E-5 0.0 0.0 1.7121184169581905E-4 4.280296042395476E-5 18-19 4.280296042395476E-5 0.0 0.0 1.7121184169581905E-4 4.280296042395476E-5 20-21 4.280296042395476E-5 0.0 0.0 1.7121184169581905E-4 1.0700740105988691E-4 22-23 4.280296042395476E-5 0.0 0.0 1.7121184169581905E-4 1.284088812718643E-4 24-25 4.280296042395476E-5 0.0 0.0 2.1401480211977381E-4 1.284088812718643E-4 26-27 4.280296042395476E-5 0.0 0.0 3.638251636036155E-4 1.284088812718643E-4 28-29 4.280296042395476E-5 0.0 0.0 0.002760790947345082 1.284088812718643E-4 30-31 4.280296042395476E-5 0.0 0.0 0.01249846444379479 1.284088812718643E-4 32-33 4.280296042395476E-5 0.0 0.0 0.030218890059312064 1.7121184169581905E-4 34-35 4.280296042395476E-5 0.0 0.0 0.052476429479768535 1.7121184169581905E-4 36-37 4.280296042395476E-5 0.0 0.0 0.09072087461857212 1.7121184169581905E-4 38-39 4.280296042395476E-5 0.0 0.0 0.15488251229408032 1.7121184169581905E-4 40-41 4.280296042395476E-5 0.0 0.0 0.2333189372709774 1.7121184169581905E-4 42-43 4.280296042395476E-5 0.0 0.0 0.31550062128497053 1.7121184169581905E-4 44-45 4.280296042395476E-5 0.0 0.0 0.40885387796961586 1.7121184169581905E-4 46-47 4.280296042395476E-5 0.0 0.0 0.5181726388923964 1.7121184169581905E-4 48-49 4.280296042395476E-5 0.0 0.0 0.6404820983038471 1.7121184169581905E-4 50-51 4.280296042395476E-5 0.0 0.0 0.7756966502831202 1.7121184169581905E-4 52-53 4.280296042395476E-5 0.0 0.0 0.9137790006107982 2.1401480211977381E-4 54-55 4.280296042395476E-5 0.0 0.0 1.0611067903900504 2.568177625437286E-4 56-57 4.280296042395476E-5 4.280296042395476E-5 0.0 1.2308419299512432 2.568177625437286E-4 58-59 4.280296042395476E-5 8.560592084790953E-5 0.0 1.4199882120646992 2.568177625437286E-4 60-61 4.280296042395476E-5 8.560592084790953E-5 0.0 1.6300865433056813 2.568177625437286E-4 62-63 4.280296042395476E-5 1.284088812718643E-4 0.0 1.8385797635307648 2.568177625437286E-4 64-65 4.280296042395476E-5 1.7121184169581905E-4 0.0 2.0548203195925843 2.568177625437286E-4 66-67 6.420444063593214E-5 1.7121184169581905E-4 0.0 2.304233169982969 2.568177625437286E-4 68-69 8.560592084790953E-5 1.7121184169581905E-4 0.0 2.5844427503983884 2.568177625437286E-4 70-71 8.560592084790953E-5 1.7121184169581905E-4 0.0 2.8850479414558228 2.568177625437286E-4 72-73 8.560592084790953E-5 1.7121184169581905E-4 0.0 3.1986438310019274 2.9962072296768334E-4 74-75 8.560592084790953E-5 2.1401480211977381E-4 0.0 3.518125127606326 2.9962072296768334E-4 76-77 8.560592084790953E-5 2.1401480211977381E-4 0.0 3.8626889590191618 2.9962072296768334E-4 78-79 8.560592084790953E-5 2.1401480211977381E-4 0.0 4.2587447518220145 2.9962072296768334E-4 80-81 8.560592084790953E-5 2.1401480211977381E-4 0.0 4.689064314444245 2.9962072296768334E-4 82-83 8.560592084790953E-5 2.1401480211977381E-4 0.0 5.130833668979882 2.9962072296768334E-4 84-85 8.560592084790953E-5 2.1401480211977381E-4 0.0 5.572881242758275 2.9962072296768334E-4 86-87 8.560592084790953E-5 2.1401480211977381E-4 0.0 6.0401825631868 2.9962072296768334E-4 88-89 8.560592084790953E-5 2.1401480211977381E-4 0.0 6.560923379704634 2.9962072296768334E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1600 0.0 41.901405 1 GTATCAA 2700 0.0 39.97529 1 TCAACGC 3030 0.0 33.839504 4 ATCAACG 3185 0.0 32.34311 3 CAACGCA 3175 0.0 32.167297 5 AACGCAG 3315 0.0 30.943478 6 TATCAAC 3460 0.0 30.45849 2 GTACATG 5155 0.0 29.607782 1 TACATGG 5370 0.0 26.962305 2 ACATGGG 5425 0.0 25.201374 3 ACGCAGA 4120 0.0 24.666424 7 GTATAGC 770 0.0 23.4651 1 CGCAGAG 4345 0.0 22.951923 8 CATGGGG 4510 0.0 22.839998 4 GAGTACA 4010 0.0 21.580252 1 TATACCG 240 1.4138459E-7 19.792862 5 TAGACCG 150 7.721176E-4 19.001148 5 GTGTAGC 1355 0.0 18.948896 1 AGTACAT 4200 0.0 18.87551 2 TAGAGCG 280 3.4904588E-8 18.661842 5 >>END_MODULE