##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921672_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2491918 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.979546678502263 31.0 31.0 34.0 26.0 34.0 2 30.03446020294408 31.0 31.0 34.0 26.0 34.0 3 30.08513883683171 31.0 31.0 34.0 25.0 34.0 4 33.54312862622285 37.0 35.0 37.0 28.0 37.0 5 33.53223460804087 37.0 35.0 37.0 28.0 37.0 6 33.565027420645464 37.0 35.0 37.0 28.0 37.0 7 33.47249427950679 37.0 35.0 37.0 28.0 37.0 8 33.43594171236774 37.0 35.0 37.0 27.0 37.0 9 34.943766608692584 39.0 35.0 39.0 28.0 39.0 10-11 34.82661708772119 39.0 35.0 39.0 27.0 39.0 12-13 34.709316879608394 39.0 35.0 39.0 27.0 39.0 14-15 35.78929443103665 40.0 36.0 41.0 27.0 41.0 16-17 35.71989648134489 40.0 36.0 41.0 27.0 41.0 18-19 35.68416456721289 40.0 36.0 41.0 27.0 41.0 20-21 35.597662724054324 40.0 36.0 41.0 26.0 41.0 22-23 35.49009718618349 40.0 36.0 41.0 25.5 41.0 24-25 35.37066147441449 40.0 36.0 41.0 25.0 41.0 26-27 35.20766674505341 39.5 35.0 41.0 24.0 41.0 28-29 35.05931655857054 39.0 35.0 41.0 24.0 41.0 30-31 34.89404827927724 39.0 35.0 41.0 23.5 41.0 32-33 34.70333935546836 39.0 34.5 41.0 22.5 41.0 34-35 34.5126830016076 39.0 34.0 41.0 21.0 41.0 36-37 34.46874596194578 39.0 34.5 41.0 20.0 41.0 38-39 34.637094599421005 39.0 35.0 41.0 21.5 41.0 40-41 34.68427171359571 39.0 35.0 41.0 20.5 41.0 42-43 34.50855365224699 39.0 35.0 41.0 18.0 41.0 44-45 34.371946629062435 39.0 34.5 41.0 16.0 41.0 46-47 34.18850198923079 39.0 34.0 41.0 14.5 41.0 48-49 34.00238009436907 39.0 34.0 41.0 12.0 41.0 50-51 32.31078049117186 37.0 32.0 39.5 8.5 40.0 52-53 32.4190767914514 37.5 32.0 39.5 8.0 40.0 54-55 33.311133632808136 38.0 33.0 40.0 7.0 41.0 56-57 33.32343540196748 38.0 33.0 40.0 4.5 41.0 58-59 33.120374747483666 38.0 33.0 40.0 2.0 41.0 60-61 32.86382256559004 37.0 33.0 40.0 2.0 41.0 62-63 32.562016085601535 37.0 32.5 40.0 2.0 41.0 64-65 32.263251840550126 36.0 32.0 39.5 2.0 41.0 66-67 31.911031382252546 36.0 32.0 39.0 2.0 41.0 68-69 31.548254798111337 35.0 32.0 39.0 2.0 41.0 70-71 31.132939366383646 35.0 31.0 38.5 2.0 40.0 72-73 30.77622498011572 35.0 31.0 37.0 2.0 39.5 74-75 30.381551078326012 35.0 31.0 37.0 2.0 39.0 76-77 30.011951637252913 35.0 30.5 36.0 2.0 39.0 78-79 29.66684056216938 35.0 30.0 36.0 2.0 37.5 80-81 29.362768156897616 35.0 30.0 35.0 2.0 37.0 82-83 29.052826577760584 35.0 30.0 35.0 2.0 37.0 84-85 28.794522331794226 34.0 29.0 35.0 2.0 36.0 86-87 28.556341942230844 34.0 29.0 35.0 2.0 36.0 88-89 28.325117239010275 34.0 29.0 35.0 2.0 36.0 90-91 28.087263505460456 34.0 29.0 35.0 2.0 35.0 92-93 27.88493180754744 34.0 29.0 35.0 2.0 35.0 94-95 27.638034839027608 34.0 29.0 35.0 2.0 35.0 96-97 27.38051131698555 34.0 27.5 35.0 2.0 35.0 98-99 27.076687916697097 34.0 27.0 35.0 2.0 35.0 100-101 25.98891897726972 33.0 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 101934.0 3 17171.0 4 11757.0 5 9096.0 6 8330.0 7 8667.0 8 8906.0 9 9609.0 10 10452.0 11 10985.0 12 10977.0 13 11111.0 14 11676.0 15 12291.0 16 12819.0 17 13491.0 18 12504.0 19 12101.0 20 12035.0 21 12693.0 22 14152.0 23 16128.0 24 18543.0 25 21698.0 26 25702.0 27 29931.0 28 35127.0 29 41413.0 30 48692.0 31 58661.0 32 73094.0 33 94042.0 34 128375.0 35 184574.0 36 301432.0 37 509502.0 38 491142.0 39 81097.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.517730177518594 17.63798926825978 12.386872650123106 25.457407904098524 2 16.174487372360154 19.296879455296235 38.96307410319781 25.56555906914579 3 19.29422196591868 23.080972955737174 29.447135319302053 28.177669759042097 4 13.50456141027232 15.177004886092247 35.81428913923737 35.50414456439807 5 14.271883062775453 36.94051742312441 34.36448513688522 14.42311437721491 6 34.37466513570557 34.77435514417777 16.508573930611504 14.342405789505158 7 29.331086309476028 31.59217078879688 20.680472565331723 18.396270336395364 8 27.010563503234795 34.49897511662639 19.697748708309803 18.792712671829012 9 27.129466797550663 15.084393688994266 19.051928465422627 38.73421104803245 10-11 25.917470867171964 24.697193174680578 27.789918546479075 21.595417411668382 12-13 26.34494285351317 22.263759098693264 27.50685820056953 23.884439847224037 14-15 23.42207512103297 23.932803241810817 24.50874735317219 28.136374283984022 16-17 23.789469036406093 27.099042758269114 25.52171631164395 23.58977189368084 18-19 23.900917970231486 26.306210275503446 26.800572943777585 22.992298810487487 20-21 24.169150336923558 25.625135338371518 26.808386553883185 23.39732777082174 22-23 24.113983530368618 25.40454490529741 26.545668843428505 23.935802720905464 24-25 23.967573159401056 25.621832579344456 26.49374198265856 23.91685227859593 26-27 23.677323244901682 25.833711462211827 26.48159122786491 24.007374065021576 28-29 23.869900439907354 26.14689558491304 26.230795441273912 23.752408533905694 30-31 24.07976528102444 25.83241175914616 26.036372130151758 24.05145082967764 32-33 23.763843458330715 25.9053342325691 26.031992432614004 24.298829876486185 34-35 24.250631116654596 25.861445890713732 26.1009903028457 23.78693268978597 36-37 24.35361701188448 25.623027362600098 26.17503476256117 23.848320862954246 38-39 24.068136907886394 25.75462430111773 26.145259960928406 24.03197883006747 40-41 24.213370691737783 25.676111140985707 26.215960685389213 23.8945574818873 42-43 24.06397366528461 25.69004339242877 25.9916947824506 24.25428815983602 44-45 23.918759028477968 25.761558713631004 26.246133524466487 24.073548733424545 46-47 24.21359305287751 25.774081796375643 25.939455964226905 24.072869186519945 48-49 23.939316676191126 25.914679634405637 25.867224916461602 24.278778772941642 50-51 24.02623932263204 25.905279149687026 26.09622720264822 23.97225432503271 52-53 24.28261512572194 25.65928388291167 26.035960079923797 24.022140911442587 54-55 23.634684165529286 25.604713690436455 26.398592680943604 24.36200946309065 56-57 23.76299618340948 25.80225110676299 26.186242619820653 24.24851009000687 58-59 23.88204399007964 25.56624503323377 26.193517016459328 24.358193960227258 60-61 23.687945744104073 25.65026553598692 26.428150836667612 24.23363788324139 62-63 23.787241332440043 25.633714912136075 26.47346709636842 24.105576659055465 64-65 23.58207700780518 25.545777246235247 26.38840575980131 24.483739986158266 66-67 23.561835315870542 25.63284795503537 26.244026099078138 24.56129063001595 68-69 23.785697827921805 25.419330478619607 26.42581209153152 24.369159601927073 70-71 23.621465495248327 25.31707484769732 26.30673316257018 24.75472649448417 72-73 23.56779938756266 25.462514853515682 26.26360943949718 24.70607631942448 74-75 23.51422461492929 25.673330877716726 26.28553942068895 24.52690508666504 76-77 23.602948006187454 25.24677629676928 26.411949646336563 24.738326050706704 78-79 23.532530950018682 25.298179093661034 26.43310360026849 24.7361863560518 80-81 23.709182951119292 25.401574119062865 26.31219491789933 24.577048011918514 82-83 23.61427155352456 25.39370090616518 26.374838536725942 24.61718900358432 84-85 23.494099347343674 25.453817853483635 26.46044295365446 24.59163984551823 86-87 23.57722301738058 25.525709628549752 26.248009757518272 24.649057596551398 88-89 23.380418507319202 25.287021124473195 26.361576728185437 24.970983640022162 90-91 23.331843608678966 25.204894127642184 26.45618238413335 25.0070798795455 92-93 23.524406152291622 25.040375570235796 26.628085789689838 24.807132487782745 94-95 23.392534937984237 24.786775870138484 26.815344132331404 25.005345059545874 96-97 23.443562293613613 24.531570667643425 26.866893516945684 25.157973521797278 98-99 23.214418603715675 24.619995132655255 26.803220492728148 25.36236577090092 100-101 23.372255412137484 24.410763066781694 26.960849488399713 25.256132032681112 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 39.0 2 57.5 3 90.5 4 95.0 5 113.0 6 175.0 7 305.5 8 463.0 9 548.5 10 500.0 11 445.5 12 504.0 13 593.5 14 651.5 15 722.5 16 842.5 17 943.0 18 1052.5 19 1196.5 20 1257.0 21 1369.0 22 1571.5 23 1802.0 24 2171.0 25 2689.5 26 3488.5 27 4706.0 28 6467.0 29 9088.5 30 12457.5 31 17090.5 32 24361.5 33 28454.5 34 29964.0 35 34176.0 36 40458.5 37 46968.5 38 53001.5 39 58752.0 40 63780.0 41 68991.0 42 74130.0 43 80489.5 44 86760.0 45 93415.0 46 98455.5 47 102070.5 48 105781.5 49 107506.5 50 107626.0 51 107153.5 52 107020.5 53 106723.0 54 105719.0 55 101510.5 56 93431.5 57 84287.5 58 76924.0 59 68109.0 60 56335.5 61 46574.5 62 39324.5 63 30601.0 64 22060.5 65 16361.0 66 12363.5 67 9682.5 68 7416.5 69 5539.5 70 4220.5 71 3092.0 72 2192.5 73 1653.0 74 1326.5 75 1005.5 76 711.5 77 485.5 78 326.0 79 218.5 80 158.0 81 116.0 82 104.0 83 87.5 84 59.0 85 45.0 86 45.0 87 41.0 88 32.0 89 24.0 90 24.5 91 26.5 92 24.0 93 22.0 94 18.0 95 16.0 96 14.0 97 11.0 98 9.5 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054656694160883305 2 0.0764070085773288 3 0.07283546248311541 4 0.07179208946682836 5 0.0679396352528454 6 0.009510746340770444 7 0.013082292434983815 8 0.01665383852919719 9 0.005778681320974447 10-11 0.012560605926840291 12-13 0.02237232525307815 14-15 0.03870512593111009 16-17 0.02590374161589587 18-19 0.009029189564022573 20-21 0.01916194674142568 22-23 0.03647792583865119 24-25 0.03344813111827918 26-27 0.019402725129799615 28-29 0.010313340968683561 30-31 0.010333405834381387 32-33 0.0069223786657506385 34-35 0.004193556930846039 36-37 5.216865081435263E-4 38-39 0.003290637974443782 40-41 8.025946279131175E-4 42-43 0.2315485501529344 44-45 0.2004680731869989 46-47 0.20598591125390162 48-49 0.21417237645861542 50-51 0.20530370582017549 52-53 0.21266751153127833 54-55 0.20883512218299316 56-57 0.2116642682463869 58-59 0.22137566324413566 60-61 0.22576986883195996 62-63 0.20995875466207153 64-65 0.2100791438562585 66-67 0.2072098680614691 68-69 0.20213345703991864 70-71 0.19452887294044185 72-73 0.20598591125390162 74-75 0.20474188958063627 76-77 0.19860204067710094 78-79 0.21706171711910263 80-81 0.22881972841802983 82-83 0.2275957716104623 84-85 0.2223387767976314 86-87 0.24238357762976148 88-89 0.23357510158841505 90-91 0.24077838837393528 92-93 0.23616346926343484 94-95 0.239875469417533 96-97 0.24629622644083793 98-99 0.239293588312296 100-101 0.24637648590362923 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2491918.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.1577757992158 #Duplication Level Percentage of deduplicated Percentage of total 1 78.83237952114615 46.63548233430655 2 11.398155991344748 13.485791133209215 3 3.825356670898595 6.788987768671609 4 1.8438574478487457 4.363140220222013 5 1.0434123299645464 3.086297634109 6 0.6740682764703831 2.3925827983679238 7 0.4689198523099939 1.94181788435292 8 0.3386593960888263 1.6027469300896484 9 0.25209161074926906 1.342186109061159 >10 1.2526329892200363 12.838836892532616 >50 0.050659370274698544 2.0048322820791187 >100 0.017148500515805198 1.8418035476497725 >500 0.0013630990606540755 0.5382177210990595 >1k 0.0012949441076155629 1.1372767442494423 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.025946279131175E-5 2 0.0 0.0 0.0 0.0 8.025946279131175E-5 3 0.0 0.0 0.0 0.0 8.025946279131175E-5 4 0.0 0.0 0.0 0.0 8.025946279131175E-5 5 0.0 0.0 0.0 0.0 8.025946279131175E-5 6 0.0 0.0 0.0 0.0 8.025946279131175E-5 7 0.0 0.0 0.0 0.0 8.025946279131175E-5 8 0.0 0.0 0.0 0.0 8.025946279131175E-5 9 0.0 0.0 0.0 0.0 8.025946279131175E-5 10-11 0.0 0.0 0.0 2.0064865697827937E-5 8.025946279131175E-5 12-13 0.0 0.0 0.0 4.0129731395655874E-5 2.6084325407176316E-4 14-15 0.0 0.0 0.0 4.0129731395655874E-5 3.6116758256090286E-4 16-17 0.0 0.0 0.0 4.0129731395655874E-5 4.012973139565588E-4 18-19 0.0 0.0 0.0 4.0129731395655874E-5 4.012973139565588E-4 20-21 0.0 0.0 0.0 6.0194597093483814E-5 4.6149191105004255E-4 22-23 0.0 0.0 0.0 1.003243284891397E-4 5.016216424456985E-4 24-25 0.0 0.0 0.0 3.4110271686307495E-4 5.216865081435264E-4 26-27 0.0 0.0 0.0 8.627892250066013E-4 5.618162395391822E-4 28-29 0.0 0.0 0.0 0.0037922596168894806 5.618162395391822E-4 30-31 0.0 0.0 0.0 0.016974876380362436 5.618162395391822E-4 32-33 0.0 0.0 0.0 0.050282553438756816 5.618162395391822E-4 34-35 0.0 0.0 0.0 0.09576960397573275 5.618162395391822E-4 36-37 0.0 0.0 0.0 0.1690063637728047 5.618162395391822E-4 38-39 0.0 0.0 0.0 0.28237285496553255 6.019459709348382E-4 40-41 0.0 0.0 0.0 0.4062533357839223 6.019459709348382E-4 42-43 0.0 0.0 0.0 0.5385008655983061 6.019459709348382E-4 44-45 0.0 0.0 0.0 0.696993239745449 6.019459709348382E-4 46-47 0.0 0.0 0.0 0.8813893555084878 6.22010836632666E-4 48-49 0.0 0.0 0.0 1.074955114895434 6.822054337261499E-4 50-51 0.0 0.0 0.0 1.2816232315830618 7.624648965174616E-4 52-53 0.0 0.0 0.0 1.485201358953224 7.825297622152896E-4 54-55 0.0 0.0 0.0 1.7208431417085155 8.226594936109454E-4 56-57 0.0 0.0 0.0 1.9974172504873755 8.627892250066013E-4 58-59 0.0 0.0 0.0 2.2802114676325624 8.828540907044293E-4 60-61 0.0 0.0 0.0 2.5811443233685862 8.828540907044293E-4 62-63 0.0 0.0 0.0 2.892591168730271 9.229838221000851E-4 64-65 0.0 0.0 0.0 3.221253668860693 9.229838221000851E-4 66-67 0.0 0.0 0.0 3.6046531226147893 9.83178419193569E-4 68-69 0.0 0.0 0.0 4.012892880102796 0.001003243284891397 70-71 0.0 0.0 0.0 4.437445373403138 0.001003243284891397 72-73 0.0 0.0 0.0 4.885112591987377 0.0010634378819848807 74-75 0.0 0.0 0.0 5.3541689574055 0.0011035676133805366 76-77 0.0 0.0 0.0 5.876517606117055 0.0011436973447761923 78-79 0.0 0.0 0.0 6.4619903223139765 0.0012239568075675042 80-81 0.0 0.0 0.0 7.053743341474318 0.0012440216732653323 82-83 0.0 0.0 0.0 7.669935367054614 0.0012440216732653323 84-85 0.0 0.0 0.0 8.307456344871701 0.0012440216732653323 86-87 0.0 0.0 0.0 8.994116178782768 0.0012440216732653323 88-89 0.0 0.0 0.0 9.728028771412221 0.0012440216732653323 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2005 0.0 47.343727 1 GTATCAA 3605 0.0 44.104855 1 TCAACGC 4320 0.0 35.379677 4 CAACGCA 4435 0.0 34.460896 5 ATCAACG 4485 0.0 33.865738 3 TATCAAC 4615 0.0 33.117474 2 AACGCAG 4840 0.0 31.94709 6 GTACATG 6365 0.0 29.603222 1 TACATGG 6390 0.0 28.523539 2 ACGCAGA 5705 0.0 26.527115 7 ACATGGG 6790 0.0 25.305317 3 CGCAGAG 5890 0.0 25.211157 8 CATGGGG 5980 0.0 21.589842 4 GCAGAGT 6660 0.0 21.371164 9 ATGGGGG 3635 0.0 19.586243 5 GTATAGG 680 0.0 19.543213 1 AGAGTAC 5720 0.0 18.455786 10-11 GAGTACA 4895 0.0 17.937664 1 GAGTACT 3300 0.0 17.613197 12-13 CAGAGTA 6300 0.0 17.547447 10-11 >>END_MODULE