##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921671_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3278825 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4524895351231 33.0 31.0 34.0 29.0 34.0 2 31.59643530838029 34.0 31.0 34.0 29.0 34.0 3 31.670559727951325 34.0 31.0 34.0 28.0 34.0 4 35.15549259262083 37.0 35.0 37.0 33.0 37.0 5 34.91952543975357 37.0 35.0 37.0 32.0 37.0 6 34.8950648479257 37.0 35.0 37.0 32.0 37.0 7 34.78231561611248 37.0 35.0 37.0 32.0 37.0 8 34.728900444519 37.0 35.0 37.0 32.0 37.0 9 36.32927130908176 39.0 37.0 39.0 32.0 39.0 10-11 36.2256346404581 39.0 37.0 39.0 32.0 39.0 12-13 36.15000343110718 39.0 37.0 39.0 32.0 39.0 14-15 37.40160347075553 40.0 38.0 41.0 32.0 41.0 16-17 37.371614679038984 40.0 38.0 41.0 32.0 41.0 18-19 37.334289570196646 40.0 38.0 41.0 31.5 41.0 20-21 37.279691352847436 40.0 38.0 41.0 31.0 41.0 22-23 37.19485684658376 40.0 38.0 41.0 31.0 41.0 24-25 37.115734600047276 40.0 37.5 41.0 31.0 41.0 26-27 36.99278400036599 40.0 37.0 41.0 30.5 41.0 28-29 36.872179363034014 40.0 37.0 41.0 30.0 41.0 30-31 36.723071374654026 40.0 37.0 41.0 30.0 41.0 32-33 36.67278156046754 40.0 37.0 41.0 30.0 41.0 34-35 36.796029370277466 40.0 37.0 41.0 30.0 41.0 36-37 36.79419746403056 40.0 37.0 41.0 30.0 41.0 38-39 36.68857944538058 40.0 37.0 41.0 30.0 41.0 40-41 36.60746197189542 40.0 37.0 41.0 30.0 41.0 42-43 36.4915440744779 40.0 37.0 41.0 30.0 41.0 44-45 36.36667403719321 40.0 36.5 41.0 29.5 41.0 46-47 36.21869739922076 40.0 36.0 41.0 29.0 41.0 48-49 36.07631865073616 40.0 36.0 41.0 28.0 41.0 50-51 35.92628258598735 40.0 35.5 41.0 28.0 41.0 52-53 35.758249830350806 39.5 35.0 41.0 28.0 41.0 54-55 35.550648174269746 39.0 35.0 41.0 27.5 41.0 56-57 35.32935350316043 39.0 35.0 41.0 27.0 41.0 58-59 35.095958765716375 39.0 35.0 41.0 26.5 41.0 60-61 34.82521513042019 38.0 35.0 40.0 26.0 41.0 62-63 34.53025275822894 37.5 34.0 40.0 26.0 41.0 64-65 34.20200330911226 37.0 34.0 40.0 26.0 41.0 66-67 33.8576023423025 36.5 34.0 39.5 25.0 41.0 68-69 33.497885980496065 36.0 34.0 39.0 24.5 41.0 70-71 33.094352702568756 35.5 33.0 39.0 23.5 40.0 72-73 32.73067897798754 35.0 33.0 38.0 23.0 40.0 74-75 32.321163984049164 35.0 33.0 37.0 22.0 39.0 76-77 29.595381424748197 33.0 29.0 34.5 17.5 36.5 78-79 31.16057230867765 34.5 31.5 36.0 19.5 38.0 80-81 31.334279963096535 35.0 32.0 36.0 20.0 37.0 82-83 31.147622700205105 35.0 32.0 35.0 20.0 37.0 84-85 30.936332527658536 35.0 32.0 35.0 18.5 36.5 86-87 30.718922479851777 35.0 32.0 35.0 17.5 36.0 88-89 30.437229800309563 35.0 32.0 35.0 11.5 36.0 90-91 30.230091267450995 34.5 31.5 35.0 8.5 35.5 92-93 30.066847117488734 34.0 31.0 35.0 4.5 35.0 94-95 29.955018184868052 34.0 31.0 35.0 2.0 35.0 96-97 29.746507666618378 34.0 31.0 35.0 2.0 35.0 98-99 29.5394339435621 34.0 31.0 35.0 2.0 35.0 100-101 28.42947717551257 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 53243.0 3 18291.0 4 10332.0 5 7398.0 6 6547.0 7 6690.0 8 6753.0 9 7503.0 10 8575.0 11 9294.0 12 9867.0 13 10777.0 14 11465.0 15 12462.0 16 13320.0 17 14152.0 18 13233.0 19 12274.0 20 11869.0 21 11901.0 22 12640.0 23 14103.0 24 17136.0 25 20193.0 26 24443.0 27 29506.0 28 35460.0 29 43216.0 30 52890.0 31 65207.0 32 82214.0 33 107637.0 34 152610.0 35 227225.0 36 394429.0 37 770053.0 38 856261.0 39 117653.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.04591333272639 19.418230299267947 13.423186834874409 26.11266953313125 2 14.96132298774468 20.76898982896596 38.28553007315739 25.984157110131967 3 17.648653891672016 24.637485328602697 29.46379550573313 28.25006527399216 4 12.774502845566518 16.85168923772246 35.985596330639 34.38821158607202 5 13.787046330220655 37.53955930310953 34.87225403372188 13.801140332947934 6 33.50809452353939 36.21122009540192 16.79189693664678 13.488788444411911 7 28.70696057276616 31.946993206407782 21.15754881703049 18.188497403795566 8 26.27398534536 35.77159500735782 19.66866179195291 18.285757855329273 9 26.479188879915483 15.394452401226783 19.17922401446372 38.94713470439402 10-11 25.458110350492714 25.436460494123263 28.274666647137554 20.830762508246476 12-13 25.91825829811737 22.828453929711213 27.92398231556757 23.329305456603848 14-15 22.999811355830026 24.51392100948574 24.935419490801042 27.550848143883194 16-17 23.35173423406251 27.685009111495734 25.784526469085723 23.178730185356034 18-19 23.41093756719358 27.019741836351585 27.029211842356883 22.54010875409795 20-21 23.876127349512128 26.199906124735765 26.92989457484539 22.994071950906715 22-23 23.71518760531593 26.03211516320633 26.64690857243067 23.605788659047068 24-25 23.526676735354147 26.270856639538952 26.630941328749557 23.57152529635734 26-27 23.397003576828617 26.445062398160267 26.631002587119912 23.526931437891204 28-29 23.58077357297309 26.630739206626153 26.435445024748805 23.353042195651952 30-31 23.795725887864993 26.33857506920949 26.33863607696922 23.527062965956297 32-33 23.488040009132362 26.381997720570215 26.28031861993383 23.849643650363596 34-35 23.847577693006535 26.38712592799779 26.378997201918626 23.386299177077053 36-37 23.870292118149 26.277609917740026 26.38413110356101 23.467966860549964 38-39 23.75620839782544 26.328196838806583 26.366259254458534 23.54933550890944 40-41 23.866241153332876 26.186027935101848 26.408280216603714 23.539450694961563 42-43 23.706351339027133 26.160159241759356 26.2786114660289 23.854877953184605 44-45 23.693226330327935 26.229690451669992 26.38071530237225 23.69636791562983 46-47 23.828151210781808 26.23778939753098 26.161021353533158 23.773038038154056 48-49 23.53990606462255 26.37076275483788 26.239331920200225 23.84999926033935 50-51 23.6927395659883 26.33031047173202 26.255388318030437 23.72156164424924 52-53 23.93235513129083 26.16081241428761 26.212920361458664 23.693912092962897 54-55 23.44793289519113 26.06649236951809 26.518593390291006 23.966981344999773 56-57 23.491205638542077 26.191354910574034 26.367986364820357 23.94945308606353 58-59 23.530493739095977 26.13452528512694 26.427678440835788 23.90730253494129 60-61 23.532613469717415 26.14523526010009 26.483613047583958 23.838538222598537 62-63 23.54710656773631 26.114804441921326 26.514346131988013 23.82374285835435 64-65 23.264809354771735 26.006460078208654 26.49867758022123 24.23005298679838 66-67 23.303129585187754 26.240258955535428 26.260857968735884 24.195753490540934 68-69 23.495503621544415 26.053287066095894 26.29961067291429 24.151598639445403 70-71 23.378912947042714 25.94332892476579 26.309046231056243 24.368711897135256 72-73 23.330566663000486 26.090209724391126 26.177877732493744 24.401345880114647 74-75 23.318017787428847 26.20566070142373 26.147590570033007 24.328730941114415 76-77 23.318285100629453 25.86617262650252 26.34560577441285 24.469936498455183 78-79 23.268452000934676 25.955214069324956 26.270414909127926 24.505919020612442 80-81 23.40918870913103 26.13216933251542 26.023368521926493 24.43527343642706 82-83 23.291473352548817 26.193107075479755 26.111759559133986 24.40366001283744 84-85 23.234105711753443 26.14929503069532 26.15199556563009 24.464603691921145 86-87 23.190510509942285 26.21406927929579 26.04143793229366 24.553982278468265 88-89 23.04305048054533 26.140781833078652 26.038308728827257 24.777858957548755 90-91 23.013403833403054 26.06337817592541 26.10196763410525 24.82125035656629 92-93 23.07665196194583 26.006132620785273 26.195188957925925 24.72202645934297 94-95 22.929080602515274 25.91917710884845 26.211491603069035 24.940250685567243 96-97 22.84464818082363 25.83859887585389 26.272450397849745 25.044302545472735 98-99 22.71127391484889 25.833473247560956 26.205164733562896 25.250088104027256 100-101 22.689633066052135 25.81999799317986 26.17358567215818 25.31678326860983 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 23.5 2 32.5 3 48.0 4 38.0 5 39.5 6 82.5 7 214.5 8 346.0 9 372.0 10 323.0 11 273.0 12 268.5 13 285.5 14 340.5 15 376.0 16 415.5 17 489.0 18 554.0 19 653.0 20 773.5 21 880.0 22 1062.0 23 1335.0 24 1705.5 25 2296.0 26 3197.5 27 4746.0 28 7236.5 29 10865.0 30 15799.5 31 22424.0 32 31773.0 33 39267.0 34 44727.0 35 52111.0 36 61457.5 37 71253.0 38 80173.0 39 88406.0 40 95882.0 41 103387.5 42 110464.0 43 118156.5 44 126020.5 45 134473.0 46 139237.5 47 141699.5 48 145354.0 49 146176.0 50 143926.0 51 140239.0 52 137145.5 53 134433.0 54 131632.0 55 124588.0 56 113356.5 57 101391.0 58 91145.0 59 80160.0 60 65246.5 61 52391.0 62 42679.5 63 31923.0 64 22092.5 65 15706.5 66 11699.0 67 9042.5 68 6699.5 69 4814.5 70 3519.0 71 2477.0 72 1671.0 73 1163.5 74 820.0 75 517.5 76 309.0 77 183.0 78 107.0 79 67.5 80 41.0 81 30.5 82 16.5 83 16.0 84 14.5 85 10.0 86 7.0 87 4.5 88 3.5 89 2.0 90 2.0 91 2.0 92 1.5 93 0.5 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16990842756170274 2 1.2199492196137335E-4 3 0.010278072175245704 4 0.006587725785914161 5 0.025466439959436687 6 0.001982417481872317 7 0.0 8 0.0 9 3.0498730490343337E-5 10-11 0.050841383727402344 12-13 2.7448857441309004E-4 14-15 0.005047539896151823 16-17 0.0 18-19 0.0015859339854978536 20-21 1.8299238294206005E-4 22-23 0.0 24-25 3.964834963744634E-4 26-27 0.0025161452654533256 28-29 0.005535519583997316 30-31 0.016881047326405038 32-33 0.011391275838143238 34-35 0.010018832966077787 36-37 0.004102079250951179 38-39 0.0 40-41 0.0036140995631056857 42-43 0.008783634381218881 44-45 0.006877463725572423 46-47 0.0035683514673701703 48-49 0.008981876129406112 50-51 0.0026991376483953855 52-53 0.0016621808117237122 54-55 0.004056331155215664 56-57 0.007533186431114804 58-59 0.015386609532378215 60-61 0.0073501940481727444 62-63 0.02116611896029828 64-65 0.03996858630759494 66-67 0.060052000335486036 68-69 0.04977392816024032 70-71 0.06863739296851769 72-73 0.03411283005344903 74-75 0.02720486759738626 76-77 0.2307533948899377 78-79 0.0859606718870327 80-81 0.06694471342630363 82-83 0.02784534093768347 84-85 0.051741096276867474 86-87 0.06677697040860675 88-89 0.2950599681288266 90-91 0.29881131197913885 92-93 0.0536625162977591 94-95 0.010232324079510191 96-97 0.01569159683728165 98-99 9.302112799554719E-4 100-101 1.8299238294206005E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3278825.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.197307421622384 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76965843860981 47.41721344525187 2 12.009743049878466 14.459083888564534 3 3.730042565615218 6.736155570542291 4 1.7590297398703238 4.235554160590013 5 0.9737461231300839 2.930844736233731 6 0.6169895228962574 2.228466479142368 7 0.408358059081985 1.7207438934458703 8 0.29193208219693034 1.4058820238594358 9 0.20970263118638674 1.1361180380985016 >10 1.1510770981877017 12.101200359783187 >50 0.056296987092665694 2.285310212912643 >100 0.02139009893580386 2.1866129499640454 >500 0.0013218421583418782 0.5648034830128995 >1k 7.117611599725246E-4 0.5920107585986589 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.049873049034334E-5 2 0.0 0.0 0.0 0.0 3.049873049034334E-5 3 0.0 0.0 0.0 0.0 3.049873049034334E-5 4 0.0 0.0 0.0 0.0 3.049873049034334E-5 5 0.0 3.049873049034334E-5 0.0 0.0 3.049873049034334E-5 6 0.0 3.049873049034334E-5 0.0 0.0 6.099746098068668E-5 7 0.0 3.049873049034334E-5 0.0 0.0 6.099746098068668E-5 8 0.0 3.049873049034334E-5 0.0 0.0 9.149619147103002E-5 9 0.0 3.049873049034334E-5 0.0 3.049873049034334E-5 2.1349111343240337E-4 10-11 0.0 3.049873049034334E-5 0.0 9.149619147103002E-5 2.1349111343240337E-4 12-13 0.0 3.049873049034334E-5 0.0 1.2199492196137336E-4 3.2023667014860507E-4 14-15 0.0 3.049873049034334E-5 0.0 1.3724428720654502E-4 3.964834963744634E-4 16-17 0.0 3.049873049034334E-5 0.0 1.524936524517167E-4 4.574809573551501E-4 18-19 0.0 3.049873049034334E-5 0.0 1.8299238294206005E-4 5.794758793165234E-4 20-21 0.0 6.099746098068668E-5 0.0 1.8299238294206005E-4 6.404733402972101E-4 22-23 0.0 6.099746098068668E-5 0.0 2.439898439227467E-4 7.624682622585834E-4 24-25 0.0 6.099746098068668E-5 0.0 3.812341311292917E-4 8.539644537296135E-4 26-27 0.0 6.099746098068668E-5 0.0 7.472188970134118E-4 8.692138189747851E-4 28-29 0.0 6.099746098068668E-5 0.0 0.0028516313008471023 8.844631842199568E-4 30-31 0.0 6.099746098068668E-5 0.0 0.0117877593345177 8.997125494651286E-4 32-33 0.0 6.099746098068668E-5 0.0 0.03516503625536587 9.454606452006435E-4 34-35 0.0 6.099746098068668E-5 0.0 0.06677697040860675 0.0010369568366716735 36-37 0.0 7.624682622585835E-5 0.0 0.11792334144091252 0.0010369568366716735 38-39 0.0 9.149619147103002E-5 0.0 0.20104763139234327 0.0010522062019168452 40-41 0.0 9.149619147103002E-5 0.0 0.29795734752540926 0.001067455567162017 42-43 0.0 9.149619147103002E-5 0.0 0.3989843922746716 0.0010827049324071887 44-45 0.0 9.149619147103002E-5 0.0 0.5215892888458518 0.001113203662897532 46-47 0.0 9.149619147103002E-5 0.0 0.6631491464167805 0.0011742011238782186 48-49 0.0 9.149619147103002E-5 0.0 0.8112052335821521 0.0012504479501040768 50-51 0.0 9.149619147103002E-5 0.0 0.9741294518615663 0.001296196045839592 52-53 0.0 9.149619147103002E-5 0.0 1.1413387417748737 0.0014181909678009654 54-55 0.0 1.3724428720654502E-4 0.0 1.333328250211585 0.0015554352550075103 56-57 0.0 1.524936524517167E-4 0.0 1.5481460584203184 0.0015706846202526818 58-59 0.0 1.8299238294206005E-4 0.0 1.7752243562861696 0.0016011833507430253 60-61 0.0 1.8299238294206005E-4 0.0 2.0159508360464495 0.001662180811723712 62-63 0.0 1.8299238294206005E-4 0.0 2.2679465967229113 0.001707928907459227 64-65 0.0 1.8299238294206005E-4 0.0 2.5405899979413356 0.0017384276379495704 66-67 0.0 1.8299238294206005E-4 0.0 2.8591034898172363 0.0017536770031947421 68-69 0.0 1.8299238294206005E-4 0.0 3.200384284004178 0.0017689263684399137 70-71 0.0 1.8299238294206005E-4 0.0 3.5628006984209284 0.0018604225599109436 72-73 0.0 1.8299238294206005E-4 0.0 3.9318048386235924 0.0020434149428530035 74-75 0.0 1.8299238294206005E-4 0.0 4.319733441095515 0.002073913673343347 76-77 0.0 1.8299238294206005E-4 0.0 4.753364391207216 0.002073913673343347 78-79 0.0 2.1349111343240337E-4 0.0 5.226491197303912 0.002073913673343347 80-81 0.0 2.1349111343240337E-4 0.0 5.7274785937035375 0.0020891630385885184 82-83 0.0 2.1349111343240337E-4 0.0 6.253154712435094 0.002226407325795064 84-85 0.0 2.1349111343240337E-4 0.0 6.7999969501269515 0.0022874047867757503 86-87 0.0 3.049873049034334E-4 0.0 7.375934976706595 0.002348402247756437 88-89 0.0 3.049873049034334E-4 0.0 8.000579475879317 0.0023789009782467807 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2300 0.0 46.289516 1 GTATCAA 4310 0.0 43.55944 1 TCAACGC 5160 0.0 35.775536 4 ATCAACG 5360 0.0 34.261986 3 CAACGCA 5395 0.0 34.24488 5 AACGCAG 5715 0.0 32.57324 6 TATCAAC 5755 0.0 32.405117 2 TATACCG 215 5.820766E-11 26.508202 5 ACGCAGA 6965 0.0 26.181902 7 GTACATG 8150 0.0 25.01855 1 CGCAGAG 7265 0.0 24.643185 8 TACATGG 8510 0.0 22.918102 2 ACATGGG 8635 0.0 21.926884 3 CATGGGG 7120 0.0 19.928629 4 GCAGAGT 8455 0.0 19.827084 9 AGAGTAC 7030 0.0 18.340546 10-11 GTACCGT 415 1.8189894E-12 18.308931 6 GAGTACA 6335 0.0 17.33117 1 ATATCGC 230 4.283458E-5 16.51784 6 TACACTG 3670 0.0 16.176384 5 >>END_MODULE