##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921669_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2962921 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.460914415200406 31.0 31.0 34.0 26.0 34.0 2 30.504324955002176 31.0 31.0 34.0 26.0 34.0 3 30.566400521647388 33.0 31.0 34.0 26.0 34.0 4 34.03271197578336 37.0 35.0 37.0 30.0 37.0 5 34.034517963860665 37.0 35.0 37.0 30.0 37.0 6 34.078408097954686 37.0 35.0 37.0 30.0 37.0 7 33.98802803044698 37.0 35.0 37.0 30.0 37.0 8 33.95995674538741 37.0 35.0 37.0 30.0 37.0 9 35.528270919136894 39.0 37.0 39.0 30.0 39.0 10-11 35.43371659251124 39.0 36.0 39.0 30.0 39.0 12-13 35.32662632584534 39.0 35.0 39.0 29.0 39.0 14-15 36.473434492516 40.0 37.0 41.0 29.0 41.0 16-17 36.41438668125137 40.0 37.0 41.0 29.0 41.0 18-19 36.38101555863285 40.0 37.0 41.0 28.5 41.0 20-21 36.30102574452711 40.0 37.0 41.0 27.5 41.0 22-23 36.203388986746525 40.0 36.5 41.0 27.0 41.0 24-25 36.09545630814996 40.0 36.0 41.0 27.0 41.0 26-27 35.950979624498935 40.0 36.0 41.0 27.0 41.0 28-29 35.817668273976935 40.0 36.0 41.0 27.0 41.0 30-31 35.67178908921298 40.0 36.0 41.0 26.5 41.0 32-33 35.50207818568231 39.5 35.5 41.0 25.5 41.0 34-35 35.33072751517844 39.0 35.0 41.0 25.0 41.0 36-37 35.29916153687526 39.0 35.0 41.0 25.0 41.0 38-39 35.476090148876736 40.0 35.0 41.0 25.5 41.0 40-41 35.53800489449432 40.0 35.0 41.0 25.0 41.0 42-43 35.38131695040131 40.0 35.0 41.0 24.5 41.0 44-45 35.2594486994422 40.0 35.0 41.0 24.0 41.0 46-47 35.10633223093022 40.0 35.0 41.0 23.5 41.0 48-49 34.94650920493662 39.5 35.0 41.0 23.0 41.0 50-51 33.23368527206767 37.0 32.5 39.5 19.0 40.0 52-53 33.35005962021937 37.5 33.5 39.5 19.5 40.0 54-55 34.272131791566494 39.0 34.0 40.5 21.0 41.0 56-57 34.29329232875261 39.0 34.0 41.0 21.0 41.0 58-59 34.10599202611208 38.5 34.0 41.0 20.0 41.0 60-61 33.856572449957326 38.0 34.0 40.0 19.5 41.0 62-63 33.56801227572386 37.0 34.0 40.0 18.0 41.0 64-65 33.280095048096115 37.0 33.5 40.0 16.0 41.0 66-67 32.937247230013895 36.0 33.0 39.5 13.0 41.0 68-69 32.577417183920865 36.0 33.0 39.0 9.5 41.0 70-71 32.169166677073065 35.0 32.5 39.0 7.5 40.5 72-73 31.799723819838597 35.0 32.0 37.5 4.0 40.0 74-75 31.396505509259278 35.0 32.0 37.0 2.0 39.0 76-77 31.007143288666825 35.0 32.0 36.5 2.0 39.0 78-79 30.64768821038428 35.0 31.5 36.0 2.0 38.5 80-81 30.312932575657605 35.0 31.0 36.0 2.0 37.0 82-83 29.97919569910909 35.0 31.0 35.0 2.0 37.0 84-85 29.693520346981913 35.0 31.0 35.0 2.0 36.5 86-87 29.42972964854615 35.0 31.0 35.0 2.0 36.0 88-89 29.174975640592507 35.0 30.5 35.0 2.0 36.0 90-91 28.91470781704946 34.5 30.0 35.0 2.0 35.5 92-93 28.68693900377364 34.0 30.0 35.0 2.0 35.0 94-95 28.416747864691633 34.0 30.0 35.0 2.0 35.0 96-97 28.141283213423513 34.0 29.0 35.0 2.0 35.0 98-99 27.83335718367111 34.0 29.0 35.0 2.0 35.0 100-101 26.72882824077996 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 95326.0 3 16735.0 4 11607.0 5 8955.0 6 8138.0 7 8328.0 8 9072.0 9 9593.0 10 10362.0 11 11122.0 12 11081.0 13 11153.0 14 11786.0 15 12818.0 16 12824.0 17 13307.0 18 13096.0 19 12464.0 20 12828.0 21 13439.0 22 14664.0 23 16863.0 24 19704.0 25 23190.0 26 27690.0 27 32775.0 28 38731.0 29 46017.0 30 54532.0 31 66387.0 32 81923.0 33 104836.0 34 143791.0 35 207770.0 36 345384.0 37 625941.0 38 674185.0 39 124486.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.02476894140212 17.67158443558218 11.446593975085856 25.857052647929844 2 16.808858734713507 19.63280671605899 37.74604969494566 25.812284854281835 3 19.416521215199722 22.886518135051013 29.547170856389414 28.149789793359847 4 13.35017953976218 14.935303542431635 36.209887250650475 35.504629667155704 5 14.147987068009126 36.86090207154337 34.815700893169236 14.175409967278267 6 34.53108344657701 34.8895477611507 16.5477523747417 14.031616417530593 7 29.26924193428612 31.395390441985594 21.006501178043166 18.328866445685122 8 26.9732971241369 34.293304618022795 20.036254204761995 18.697144053078315 9 26.76094178814458 14.59820902696045 19.10618760224886 39.53466158264611 10-11 25.835562416783837 24.733147108031098 28.28676941294136 21.144521062243708 12-13 26.05039449502881 22.324398062565574 27.78951803145428 23.83568941095134 14-15 23.22573108181978 24.006960770708847 24.748315264569047 28.01899288290232 16-17 23.71156451469698 27.016861801556242 25.740723173355473 23.530850510391307 18-19 23.670523777321012 26.480398201121403 26.78819971555616 23.06087830600142 20-21 24.118549075175093 25.818906987519064 26.681289227100063 23.381254710205777 22-23 23.92973148265849 25.757548900792532 26.394940169762798 23.917779446786177 24-25 23.728114287990802 25.795657615446192 26.562507912938933 23.913720183624072 26-27 23.648898751357265 25.98229110421594 26.509854769770687 23.858955374656116 28-29 23.783631614363056 26.24495009971955 26.309573296189765 23.66184498972763 30-31 23.94399452501926 25.97113821035301 26.189040418488357 23.89582684613937 32-33 23.64604040643723 26.072785997367582 26.175682994216537 24.105490601978655 34-35 24.097600622120936 25.989429479459748 26.216683182753425 23.69628671566589 36-37 24.104830331884077 25.81710431192122 26.23703045190155 23.841034904293156 38-39 23.88639979289941 25.958553218792353 26.285793071884594 23.86925391642364 40-41 24.062265642350063 25.78148467406441 26.420135638023197 23.736114045562335 42-43 23.853730298813204 25.768933323118826 26.25282019306432 24.12451618500365 44-45 23.774430616567113 25.83799489523257 26.435878565572864 23.951695922627454 46-47 23.941954553339585 25.79641892570476 26.223975566646118 24.037650954309534 48-49 23.65778101746948 25.93992062755331 26.286682618259317 24.1156157367179 50-51 23.72380902142348 25.99519293846177 26.351783170956367 23.929214869158386 52-53 23.928547334170073 25.786031232769336 26.33553575888149 23.949885674179104 54-55 23.438151478231052 25.677537360295172 26.630071448933236 24.25423971254054 56-57 23.49451401554854 25.85870100585822 26.49959343978014 24.1471915388131 58-59 23.57825503056096 25.657526505160682 26.541313690085854 24.222904774192504 60-61 23.463461174887772 25.71465919271743 26.64679468296199 24.175084949432808 62-63 23.574907145631258 25.65981256833992 26.672566422554965 24.092713863473854 64-65 23.398799054907546 25.55621572103879 26.57129060172712 24.47369462232654 66-67 23.35288530176884 25.67844349829419 26.48349968737816 24.48517151255881 68-69 23.586085470484296 25.539112529707424 26.536413015085802 24.338388984722474 70-71 23.493731283534107 25.39378751111957 26.487334592677968 24.62514661266835 72-73 23.498257441484846 25.590426638988166 26.39364526198737 24.517670657539615 74-75 23.51750211213586 25.69511967699073 26.36520397137335 24.42217423950006 76-77 23.549628612752187 25.474992751460906 26.462535407951158 24.51284322783574 78-79 23.465453933646323 25.565568663059917 26.475236793224116 24.493740610069644 80-81 23.708793076448785 25.57187517016823 26.300795533297507 24.418536220085482 82-83 23.633258491417646 25.640004917683758 26.313632891525334 24.413103699373266 84-85 23.602291007149294 25.63173739218101 26.365250634497915 24.40072096617178 86-87 23.674224678304455 25.68060835730201 26.27711634417339 24.368050620220146 88-89 23.638249148364014 25.479775093348913 26.26030541696805 24.621670341319028 90-91 23.708361063731008 25.478314476662916 26.273837923683125 24.53948653592295 92-93 23.854805878146774 25.358251574020397 26.382388019112163 24.40455452872067 94-95 23.808877091178466 25.200608527331724 26.471987531785746 24.518526849704067 96-97 23.88480206433315 25.063174196376863 26.40096180388294 24.65106193540705 98-99 23.860205580824093 25.092939600802406 26.317978335149476 24.728876483224024 100-101 24.136311948463465 24.953143761418065 26.33050828680128 24.58003600331719 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 37.0 2 71.5 3 118.5 4 115.0 5 130.5 6 209.0 7 346.0 8 524.5 9 594.5 10 514.0 11 476.5 12 529.0 13 587.0 14 663.5 15 796.5 16 911.5 17 998.0 18 1071.5 19 1153.5 20 1306.0 21 1452.5 22 1637.0 23 1863.5 24 2117.5 25 2566.0 26 3226.5 27 4236.5 28 5783.5 29 8136.5 30 11817.5 31 17023.0 32 24251.5 33 29824.5 34 34050.5 35 40545.0 36 49426.0 37 58351.0 38 66784.5 39 74903.0 40 81857.5 41 89020.5 42 96197.0 43 103737.5 44 110701.0 45 117927.5 46 123244.5 47 126581.0 48 129908.0 49 131256.5 50 131465.0 51 130870.5 52 129585.5 53 127462.5 54 123652.0 55 116777.5 56 107001.5 57 95599.0 58 85795.0 59 75154.0 60 61712.0 61 50553.0 62 41560.5 63 32017.5 64 23104.0 65 16932.0 66 12854.0 67 10154.5 68 7870.0 69 5924.0 70 4488.5 71 3250.0 72 2279.5 73 1777.0 74 1453.5 75 1074.0 76 793.5 77 553.5 78 361.5 79 246.0 80 158.0 81 132.5 82 124.0 83 95.0 84 69.5 85 56.5 86 53.5 87 49.0 88 40.5 89 36.0 90 36.5 91 32.5 92 24.5 93 20.0 94 15.0 95 12.0 96 12.0 97 11.5 98 6.5 99 4.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05234699136426519 2 0.07212477146707591 3 0.06834471793206771 4 0.06807471410813856 5 0.06385590435924549 6 0.009551385271493906 7 0.012858932114626073 8 0.017077741863519142 9 0.005872583170459151 10-11 0.012842056875630501 12-13 0.02203906212821739 14-15 0.039825564029550564 16-17 0.02639287378907504 18-19 0.010040767202365504 20-21 0.020368413467655735 22-23 0.036534892425413974 24-25 0.03375047799114455 26-27 0.02107717350546977 28-29 0.0122345482717899 30-31 0.011930793969869598 32-33 0.008420744258790566 34-35 0.005163823132645116 36-37 6.412590818317464E-4 38-39 0.003695677340030328 40-41 0.0011812667296900593 42-43 0.21402865618084319 44-45 0.185273248932388 46-47 0.19075770160594901 48-49 0.19742342100920002 50-51 0.1891714291403652 52-53 0.19583714854361625 54-55 0.1925127264614885 56-57 0.1955671447196871 58-59 0.20398788897847764 60-61 0.20797044538143272 62-63 0.19360961699620072 64-65 0.19406524844908116 66-67 0.19150021212175417 68-69 0.18689327187596294 70-71 0.17881003239708382 72-73 0.19006581680713053 74-75 0.1892220548573519 76-77 0.1832144697749282 78-79 0.20127097550019052 80-81 0.21222300560831694 82-83 0.21075485981570213 84-85 0.20437601947537581 86-87 0.22383317003727066 88-89 0.21618868677227643 90-91 0.22371504336430162 92-93 0.21866934690462553 94-95 0.22287128141452303 96-97 0.22980700464170323 98-99 0.22158876325085955 100-101 0.2296551274907431 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2962921.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.83194007506836 #Duplication Level Percentage of deduplicated Percentage of total 1 80.53957157536786 50.60457534895192 2 10.973753476792373 13.790044417047827 3 3.496241742979378 6.590269550484986 4 1.554747241882335 3.907511421353147 5 0.884067871745426 2.7773849769900916 6 0.5514376929746484 2.078874004807023 7 0.36390185986692686 1.6005261896655272 8 0.28309444754925406 1.422989869119945 9 0.21392703261859536 1.20973054445359 >10 1.0796828011971817 11.785358927669941 >50 0.045601819681252896 1.9349551697502465 >100 0.012359172558972118 1.3228552768839952 >500 0.001021734364586521 0.44573374249255143 >1k 5.91530421268967E-4 0.529190560329268 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.375047799114455E-5 2 0.0 0.0 0.0 0.0 3.375047799114455E-5 3 0.0 3.375047799114455E-5 0.0 0.0 3.375047799114455E-5 4 0.0 3.375047799114455E-5 0.0 0.0 6.75009559822891E-5 5 0.0 3.375047799114455E-5 0.0 0.0 6.75009559822891E-5 6 0.0 3.375047799114455E-5 0.0 0.0 6.75009559822891E-5 7 0.0 3.375047799114455E-5 0.0 0.0 6.75009559822891E-5 8 0.0 3.375047799114455E-5 0.0 0.0 1.0125143397343364E-4 9 0.0 3.375047799114455E-5 0.0 3.375047799114455E-5 2.3625334593801184E-4 10-11 0.0 3.375047799114455E-5 0.0 3.375047799114455E-5 2.3625334593801184E-4 12-13 0.0 3.375047799114455E-5 0.0 5.062571698671682E-5 3.037543019203009E-4 14-15 0.0 3.375047799114455E-5 0.0 6.75009559822891E-5 3.037543019203009E-4 16-17 0.0 3.375047799114455E-5 0.0 6.75009559822891E-5 3.037543019203009E-4 18-19 0.0 3.375047799114455E-5 0.0 1.0125143397343364E-4 3.037543019203009E-4 20-21 0.0 3.375047799114455E-5 0.0 1.0125143397343364E-4 3.206295409158732E-4 22-23 0.0 3.375047799114455E-5 0.0 1.350019119645782E-4 4.556314528804514E-4 24-25 0.0 3.375047799114455E-5 0.0 3.206295409158732E-4 5.568828868538851E-4 26-27 0.0 3.375047799114455E-5 0.0 7.256352768096079E-4 6.412590818317464E-4 28-29 0.0 3.375047799114455E-5 0.0 0.006901972749189061 6.75009559822891E-4 30-31 0.0 3.375047799114455E-5 0.0 0.031506071204733435 6.75009559822891E-4 32-33 0.0 3.375047799114455E-5 0.0 0.08073114335481776 6.75009559822891E-4 34-35 1.6875238995572275E-5 6.75009559822891E-5 0.0 0.14860335459500945 6.75009559822891E-4 36-37 3.375047799114455E-5 6.75009559822891E-5 0.0 0.2579211528083266 6.75009559822891E-4 38-39 3.375047799114455E-5 6.75009559822891E-5 0.0 0.4357524213436673 7.087600378140356E-4 40-41 3.375047799114455E-5 6.75009559822891E-5 0.0 0.6300032974216998 7.087600378140356E-4 42-43 3.375047799114455E-5 6.75009559822891E-5 0.0 0.8352905798028365 7.087600378140356E-4 44-45 3.375047799114455E-5 6.75009559822891E-5 0.0 1.0818715720061385 7.256352768096079E-4 46-47 3.375047799114455E-5 6.75009559822891E-5 0.0 1.3759563619819766 7.425105158051801E-4 48-49 5.062571698671682E-5 6.75009559822891E-5 0.0 1.6705980348446685 8.100114717874691E-4 50-51 6.75009559822891E-5 6.75009559822891E-5 0.0 1.9800392923064773 8.100114717874691E-4 52-53 6.75009559822891E-5 6.75009559822891E-5 0.0 2.2972431597062495 8.775124277697583E-4 54-55 6.75009559822891E-5 6.75009559822891E-5 0.0 2.6533782034688067 9.28138144756475E-4 56-57 6.75009559822891E-5 6.75009559822891E-5 0.0 3.06395276823108 9.450133837520474E-4 58-59 6.75009559822891E-5 1.0125143397343364E-4 0.0 3.489073789007537 9.450133837520474E-4 60-61 6.75009559822891E-5 1.0125143397343364E-4 0.0 3.9301925363517958 9.618886227476197E-4 62-63 6.75009559822891E-5 1.0125143397343364E-4 0.0 4.380744542294581 9.78763861743192E-4 64-65 1.0125143397343364E-4 1.1812667296900592E-4 0.0 4.8670551796689825 0.0010125143397343365 66-67 1.0125143397343364E-4 1.350019119645782E-4 0.0 5.4265368533281855 0.001046264817725481 68-69 1.350019119645782E-4 2.0250286794686728E-4 0.0 6.026957856790647 0.0010800152957166256 70-71 1.350019119645782E-4 2.1937810694243955E-4 0.0 6.635900855945872 0.0011981419686856315 72-73 1.350019119645782E-4 2.3625334593801184E-4 0.0 7.257348407196817 0.0012487676856723483 74-75 1.350019119645782E-4 2.3625334593801184E-4 0.0 7.906302598010544 0.001282518163663493 76-77 1.350019119645782E-4 2.3625334593801184E-4 0.0 8.635161045468307 0.001282518163663493 78-79 1.350019119645782E-4 2.3625334593801184E-4 3.375047799114455E-5 9.423268457039523 0.001282518163663493 80-81 1.350019119645782E-4 2.3625334593801184E-4 3.375047799114455E-5 10.222817280649737 0.0013331438806502096 82-83 1.350019119645782E-4 2.5312858493358413E-4 3.375047799114455E-5 11.039798226142377 0.0014512705536192157 84-85 1.350019119645782E-4 2.700038239291564E-4 3.375047799114455E-5 11.878632606134284 0.0014512705536192157 86-87 1.350019119645782E-4 2.700038239291564E-4 3.375047799114455E-5 12.77597343972384 0.001468145792614788 88-89 1.350019119645782E-4 2.700038239291564E-4 3.375047799114455E-5 13.741996496025376 0.0015187715096015048 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1905 0.0 43.350986 1 GTATCAA 3140 0.0 39.299625 1 TCAACGC 3510 0.0 33.674072 4 CAACGCA 3595 0.0 33.00825 5 ATCAACG 3750 0.0 31.39023 3 AACGCAG 3995 0.0 29.569 6 TATCAAC 3965 0.0 29.328487 2 GTACATG 6130 0.0 27.098938 1 TACATGG 6415 0.0 25.08244 2 ACATGGG 6685 0.0 23.643778 3 ACGCAGA 4830 0.0 23.47932 7 GAGTACA 4740 0.0 22.329103 1 CGCAGAG 5055 0.0 21.872519 8 CATGGGG 5590 0.0 20.634687 4 GTATAGA 795 0.0 19.104143 1 AGTACAT 5065 0.0 18.929478 2 TGGACCG 590 0.0 18.503643 5 AGAGTAC 4755 0.0 17.415447 10-11 GTATAGC 775 0.0 17.147509 1 CTATACT 950 0.0 16.988646 4 >>END_MODULE