##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921669_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2962921 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249491633425258 33.0 31.0 34.0 28.0 34.0 2 31.379427598643368 33.0 31.0 34.0 28.0 34.0 3 31.456194073348563 34.0 31.0 34.0 28.0 34.0 4 34.93690449390989 37.0 35.0 37.0 32.0 37.0 5 34.66252795805221 37.0 35.0 37.0 32.0 37.0 6 34.635211671185296 37.0 35.0 37.0 32.0 37.0 7 34.50508636578566 37.0 35.0 37.0 31.0 37.0 8 34.4503518656083 37.0 35.0 37.0 31.0 37.0 9 36.02828121303268 39.0 37.0 39.0 31.0 39.0 10-11 35.91656088704356 39.0 37.0 39.0 31.0 39.0 12-13 35.83600997124122 39.0 37.0 39.0 30.0 39.0 14-15 37.06246875971381 40.0 38.0 41.0 31.0 41.0 16-17 37.022286284379504 40.0 38.0 41.0 31.0 41.0 18-19 36.974244166483004 40.0 37.5 41.0 30.5 41.0 20-21 36.912864197189194 40.0 37.0 41.0 30.0 41.0 22-23 36.817557572409115 40.0 37.0 41.0 30.0 41.0 24-25 36.73355516397501 40.0 37.0 41.0 30.0 41.0 26-27 36.60310787901534 40.0 37.0 41.0 30.0 41.0 28-29 36.47906390349253 40.0 37.0 41.0 30.0 41.0 30-31 36.32055056479737 40.0 36.5 41.0 29.0 41.0 32-33 36.26653478104883 40.0 36.5 41.0 29.5 41.0 34-35 36.39339337768371 40.0 37.0 41.0 30.0 41.0 36-37 36.38971508183985 40.0 37.0 41.0 30.0 41.0 38-39 36.27741779142947 40.0 37.0 41.0 29.0 41.0 40-41 36.193543972316505 40.0 36.0 41.0 28.5 41.0 42-43 36.067032499347775 40.0 36.0 41.0 28.0 41.0 44-45 35.93449724106718 40.0 36.0 41.0 27.5 41.0 46-47 35.781467680036016 40.0 35.5 41.0 27.0 41.0 48-49 35.63697445865077 40.0 35.0 41.0 27.0 41.0 50-51 35.47568818068386 39.5 35.0 41.0 26.0 41.0 52-53 35.29678955328205 39.0 35.0 41.0 26.0 41.0 54-55 35.07930906696466 39.0 35.0 41.0 26.0 41.0 56-57 34.850363037016514 39.0 35.0 41.0 25.0 41.0 58-59 34.6068349442999 38.0 34.5 40.0 24.5 41.0 60-61 34.3256289992207 38.0 34.0 40.0 23.5 41.0 62-63 34.01906024494072 37.0 34.0 40.0 23.0 41.0 64-65 33.67703678228343 37.0 34.0 40.0 22.0 41.0 66-67 33.32608378691164 36.0 34.0 39.0 22.0 41.0 68-69 32.96433958245933 36.0 33.0 39.0 21.5 41.0 70-71 32.562470615990094 35.0 33.0 38.5 20.0 40.0 72-73 32.195115225819386 35.0 33.0 37.5 19.0 40.0 74-75 31.785976912648024 35.0 32.5 37.0 17.5 39.0 76-77 29.07008624259641 33.0 28.5 34.5 9.5 36.5 78-79 30.639015856312064 34.5 31.0 36.0 10.5 37.0 80-81 30.81835813374707 35.0 32.0 35.5 10.5 37.0 82-83 30.638089574443597 35.0 32.0 35.0 7.0 37.0 84-85 30.43242968678544 35.0 32.0 35.0 6.0 36.0 86-87 30.215993440257098 35.0 31.5 35.0 2.0 36.0 88-89 29.93810381714531 34.5 31.0 35.0 2.0 36.0 90-91 29.729303110005297 34.0 31.0 35.0 2.0 35.0 92-93 29.562078435435843 34.0 31.0 35.0 2.0 35.0 94-95 29.444217378728627 34.0 31.0 35.0 2.0 35.0 96-97 29.227225768084942 34.0 31.0 35.0 2.0 35.0 98-99 29.008181284617443 34.0 31.0 35.0 2.0 35.0 100-101 27.85714722059751 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61798.0 3 20886.0 4 11334.0 5 7807.0 6 7070.0 7 6956.0 8 7320.0 9 7745.0 10 8542.0 11 9281.0 12 10003.0 13 10415.0 14 11312.0 15 11648.0 16 12708.0 17 13527.0 18 12695.0 19 12000.0 20 11870.0 21 11628.0 22 12195.0 23 13942.0 24 16247.0 25 19332.0 26 22850.0 27 27455.0 28 32805.0 29 39572.0 30 48509.0 31 60371.0 32 76041.0 33 99783.0 34 140485.0 35 209894.0 36 367594.0 37 699134.0 38 722484.0 39 87680.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.79848323623143 19.159993023265248 11.925348938143674 27.116174802359648 2 15.823021704624193 20.98610929702047 36.10185503002615 27.089013968329184 3 18.03365120426864 24.01432106899685 29.18520313721466 28.766824589519846 4 12.941537427144553 16.049462722717937 35.045242270943284 35.96375757919423 5 13.867404751029872 37.21884248630186 34.77743198358822 14.136320779080048 6 34.53805569468501 35.50283036571322 16.180133573281026 13.77898036632074 7 29.13415511247178 31.54650427736683 20.948516683367526 18.370823926793864 8 27.034639128076655 34.70467150491019 19.69175013441128 18.56893923260188 9 26.55022747829843 14.545009652639962 18.93054824294952 39.97421462611208 10-11 25.77914372063317 24.965740282556354 28.159976715041367 21.095139281769104 12-13 26.013286950957287 22.448358993380488 27.708530844876332 23.829823210785893 14-15 23.105132101772917 24.157507874803077 24.618241866359973 28.119118157064033 16-17 23.682296518299513 27.21578712891337 25.58766352112106 23.51425283166606 18-19 23.6573438586887 26.6394285014194 26.66847121902124 23.03475642087066 20-21 24.068138977999705 25.96174713078168 26.569206339027613 23.400907552191 22-23 23.876421274816302 25.867210094362964 26.29681992871224 23.959548702108492 24-25 23.673822874202365 26.012270725475382 26.435638936172616 23.878267464149634 26-27 23.599977318959223 26.14408468668606 26.398318227827676 23.857619766527037 28-29 23.72134970414341 26.377646060943995 26.20611640592381 23.69488782898878 30-31 23.917586603704862 26.141655282435273 26.072303456181768 23.868454657678104 32-33 23.582932303239843 26.19498079207339 26.079557709684703 24.14252919500206 34-35 24.010301024296755 26.135279674936157 26.181556312693704 23.672862988073387 36-37 23.999609154097072 25.993935813179707 26.180397660392373 23.826057372330844 38-39 23.83081152531767 26.078526237879146 26.234605349687918 23.856056887115262 40-41 23.968531964185424 25.88213375383419 26.34770434613557 23.80162993584482 42-43 23.805266840587596 25.892706155876045 26.12199420181061 24.180032801725755 44-45 23.703983477306103 25.951990624809085 26.34737148012649 23.996654417758318 46-47 23.812633794129386 25.982096373119077 26.142332905529635 24.0629369272219 48-49 23.571784430684982 26.0671365616165 26.23755842746084 24.123520580237678 50-51 23.612705398714407 26.07397982000348 26.251309978449694 24.062004802832423 52-53 23.86391059182324 25.909315354314632 26.192099460622686 24.03467459323944 54-55 23.304260041896185 25.84132000832321 26.48908574474918 24.365334205031424 56-57 23.393399363550078 25.96378824066286 26.274857527836247 24.367954867950818 58-59 23.416835431223472 25.79602327187147 26.356604585951445 24.430536710953614 60-61 23.308534482598585 25.935610520725238 26.436926126112137 24.31892887056404 62-63 23.377441671382897 25.858259295723794 26.39564769074731 24.368651342146 64-65 23.076804902548346 25.741299411660435 26.33019608505179 24.851699600739437 66-67 23.119048495485327 25.89179908554902 26.17579626094307 24.813356158022586 68-69 23.305718816833313 25.771051812716543 26.154498906016716 24.76873046443343 70-71 23.15804085225065 25.553689186982492 26.180206995228968 25.10806296553789 72-73 23.17988162364205 25.713264654653468 26.044672540581093 25.06218118112339 74-75 23.149154372258508 25.776682165706376 25.977028606885817 25.097134855149307 76-77 23.15525962010543 25.44199067421114 26.177997720558153 25.22475198512528 78-79 23.083898288911254 25.5225371126034 26.15023863500675 25.243325963478604 80-81 23.233178313423913 25.53620339692865 25.938427713101714 25.292190576545725 82-83 23.119629142551666 25.569100524170533 25.98405831521702 25.327212018060784 84-85 23.084022143685424 25.44901272579799 26.009223383915504 25.457741746601087 86-87 23.010893447061942 25.541164139317374 25.935080398465537 25.512862015155147 88-89 22.927544012630356 25.320159558479048 25.934295188602345 25.818001240288247 90-91 22.84711180648811 25.295308608709284 25.975106571752672 25.88247301304994 92-93 22.901765039285845 25.152903043135666 26.081591174280177 25.863740743298308 94-95 22.801117450999286 24.940817052924668 26.190363276211333 26.067702219864714 96-97 22.731047193408248 24.79414276503887 26.191345793572303 26.283464247980582 98-99 22.626233716528112 24.831406559188522 26.083947568882753 26.458412155400605 100-101 22.55988478927112 24.75743089119731 26.103282962389958 26.579401357141613 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 39.5 2 59.0 3 89.5 4 76.5 5 84.5 6 161.5 7 301.0 8 474.5 9 502.5 10 405.5 11 360.5 12 358.5 13 380.0 14 405.5 15 422.5 16 489.5 17 550.0 18 598.0 19 692.0 20 818.5 21 967.0 22 1139.0 23 1383.5 24 1726.0 25 2189.0 26 2863.5 27 3950.5 28 5609.0 29 8108.5 30 11687.5 31 16758.5 32 24355.0 33 30001.0 34 33968.5 35 40434.0 36 48968.0 37 57684.5 38 65682.0 39 73270.5 40 80591.0 41 87842.0 42 94667.5 43 101832.0 44 108685.5 45 116058.5 46 121993.0 47 126142.0 48 129913.5 49 131540.0 50 131866.0 51 131860.0 52 130930.5 53 129738.5 54 127158.5 55 120735.0 56 110617.0 57 98660.0 58 88493.0 59 77182.5 60 63445.5 61 51722.0 62 41985.5 63 32020.0 64 22797.5 65 16513.0 66 12589.0 67 9882.5 68 7460.0 69 5570.0 70 4158.5 71 2973.0 72 2078.0 73 1544.5 74 1210.5 75 890.5 76 620.5 77 397.0 78 208.0 79 111.5 80 68.0 81 37.5 82 32.5 83 24.5 84 14.5 85 7.5 86 3.0 87 2.5 88 2.0 89 2.0 90 1.5 91 1.5 92 1.0 93 0.0 94 1.0 95 1.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15245090908599992 2 1.350019119645782E-4 3 0.009888890051405353 4 0.006918847988184633 5 0.022207814518173115 6 0.0017887753335306612 7 0.0 8 0.0 9 3.375047799114455E-5 10-11 0.045647521483023 12-13 4.725066918760237E-4 14-15 0.005011945981684965 16-17 3.375047799114455E-5 18-19 0.0014850210316103602 20-21 2.025028679468673E-4 22-23 0.0 24-25 5.231324088627405E-4 26-27 0.0031725449311675877 28-29 0.005670080302512284 30-31 0.01653773421566083 32-33 0.011542663472971436 34-35 0.010226394831316798 36-37 0.0039319306859683404 38-39 1.6875238995572275E-5 40-41 0.0035438001890701776 42-43 0.009180130013591317 44-45 0.007020099422158066 46-47 0.0038306792519949063 48-49 0.009213880491582461 50-51 0.0029025411072384315 52-53 0.002025028679468673 54-55 0.004100683075924063 56-57 0.007998863283901259 58-59 0.015542095114922067 60-61 0.0073069784850827955 62-63 0.021313426851407784 64-65 0.04036557167740888 66-67 0.06075086038406018 68-69 0.05047383983575668 70-71 0.06856409603901015 72-73 0.034155483727038284 74-75 0.02706788334889793 76-77 0.21922622979147943 78-79 0.08226679010341484 80-81 0.06787221124019169 82-83 0.027422263367804945 84-85 0.051806983716406886 86-87 0.0679228369571784 88-89 0.29595794150434657 90-91 0.2972742101460012 92-93 0.05013633505584523 94-95 0.009635761466471769 96-97 0.0145464560141833 98-99 8.100114717874692E-4 100-101 8.437619497786138E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2962921.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.35443218830289 #Duplication Level Percentage of deduplicated Percentage of total 1 80.03953072279565 49.90819490838147 2 11.31365810530399 14.109134542576419 3 3.532094021481668 6.607251514355661 4 1.634171938682896 4.075914533385204 5 0.865357696505116 2.6979443902677125 6 0.5701687187766935 2.133152802651172 7 0.39138100975130447 1.708303844262906 8 0.27616213604337625 1.3775946547914864 9 0.21170370654818427 1.1880597972574016 >10 1.1055719250257745 11.99281564717765 >50 0.04654011850148193 1.9578728995303039 >100 0.012140489276875143 1.3254733462838961 >500 9.767644118283125E-4 0.4434265336549597 >1k 5.426468953047089E-4 0.47486058542379395 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.375047799114455E-5 0.0 3 0.0 0.0 0.0 3.375047799114455E-5 0.0 4 0.0 0.0 0.0 6.75009559822891E-5 0.0 5 0.0 0.0 0.0 6.75009559822891E-5 0.0 6 0.0 0.0 0.0 6.75009559822891E-5 0.0 7 0.0 0.0 0.0 6.75009559822891E-5 0.0 8 0.0 0.0 0.0 6.75009559822891E-5 0.0 9 0.0 0.0 0.0 1.0125143397343364E-4 3.375047799114455E-5 10-11 3.375047799114455E-5 3.375047799114455E-5 0.0 1.0125143397343364E-4 3.375047799114455E-5 12-13 3.375047799114455E-5 3.375047799114455E-5 0.0 1.0125143397343364E-4 1.518771509601505E-4 14-15 3.375047799114455E-5 3.375047799114455E-5 0.0 1.0125143397343364E-4 2.1937810694243955E-4 16-17 3.375047799114455E-5 6.75009559822891E-5 0.0 1.1812667296900592E-4 2.700038239291564E-4 18-19 3.375047799114455E-5 6.75009559822891E-5 0.0 1.350019119645782E-4 3.206295409158732E-4 20-21 3.375047799114455E-5 6.75009559822891E-5 0.0 1.350019119645782E-4 3.7125525790259004E-4 22-23 3.375047799114455E-5 6.75009559822891E-5 0.0 2.0250286794686728E-4 4.3875621388487915E-4 24-25 5.062571698671682E-5 6.75009559822891E-5 0.0 3.881304968981623E-4 5.062571698671683E-4 26-27 6.75009559822891E-5 6.75009559822891E-5 0.0 7.931362327918969E-4 5.400076478583128E-4 28-29 6.75009559822891E-5 6.75009559822891E-5 0.0 0.006935723227180205 5.400076478583128E-4 30-31 6.75009559822891E-5 6.75009559822891E-5 0.0 0.031556696921720154 5.400076478583128E-4 32-33 6.75009559822891E-5 6.75009559822891E-5 0.0 0.08147365387062294 5.400076478583128E-4 34-35 6.75009559822891E-5 6.75009559822891E-5 0.0 0.15025712801657554 5.737581258494573E-4 36-37 6.75009559822891E-5 6.75009559822891E-5 0.0 0.25871428904111854 5.737581258494573E-4 38-39 6.75009559822891E-5 6.75009559822891E-5 0.0 0.4360561756455876 6.075086038406019E-4 40-41 6.75009559822891E-5 8.437619497786138E-5 0.0 0.6300876736166776 6.075086038406019E-4 42-43 6.75009559822891E-5 1.0125143397343364E-4 0.0 0.8363874703375487 6.075086038406019E-4 44-45 6.75009559822891E-5 1.0125143397343364E-4 0.0 1.0817196948551784 6.075086038406019E-4 46-47 6.75009559822891E-5 1.0125143397343364E-4 0.0 1.3740663352144726 6.075086038406019E-4 48-49 6.75009559822891E-5 1.0125143397343364E-4 0.0 1.666396100334771 6.412590818317465E-4 50-51 6.75009559822891E-5 1.0125143397343364E-4 0.0 1.9737954538781155 6.412590818317465E-4 52-53 6.75009559822891E-5 1.0125143397343364E-4 0.0 2.290273686001078 7.256352768096079E-4 54-55 6.75009559822891E-5 1.0125143397343364E-4 0.0 2.6442655744111976 7.762609937963246E-4 56-57 6.75009559822891E-5 1.350019119645782E-4 0.0 3.051886972349246 8.268867107830415E-4 58-59 6.75009559822891E-5 1.350019119645782E-4 0.0 3.474510457754358 8.60637188774186E-4 60-61 6.75009559822891E-5 1.350019119645782E-4 0.0 3.914144184067007 8.775124277697583E-4 62-63 6.75009559822891E-5 1.350019119645782E-4 0.0 4.36157427079561 9.450133837520474E-4 64-65 6.75009559822891E-5 1.350019119645782E-4 0.0 4.8475474033901005 0.0010125143397343365 66-67 6.75009559822891E-5 1.350019119645782E-4 0.0 5.405864685558609 0.0010293895787299087 68-69 6.75009559822891E-5 1.350019119645782E-4 0.0 6.002303132618115 0.001046264817725481 70-71 6.75009559822891E-5 1.518771509601505E-4 0.0 6.610284243150593 0.001046264817725481 72-73 6.75009559822891E-5 1.6875238995572276E-4 0.0 7.232491180156339 0.0010631400567210534 74-75 6.75009559822891E-5 1.6875238995572276E-4 0.0 7.881597248121027 0.0010800152957166256 76-77 6.75009559822891E-5 1.6875238995572276E-4 0.0 8.612683227126205 0.0010800152957166256 78-79 6.75009559822891E-5 1.8562762895129502E-4 0.0 9.403035045483833 0.0010800152957166256 80-81 6.75009559822891E-5 2.0250286794686728E-4 0.0 10.206482049302023 0.0010800152957166256 82-83 6.75009559822891E-5 2.0250286794686728E-4 0.0 11.026466787335876 0.0011137657737077702 84-85 6.75009559822891E-5 2.0250286794686728E-4 0.0 11.868338710346986 0.0011137657737077702 86-87 6.75009559822891E-5 2.0250286794686728E-4 0.0 12.76819395454688 0.0011306410127033424 88-89 6.75009559822891E-5 2.0250286794686728E-4 0.0 13.73934708350307 0.0011475162516989146 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1820 0.0 44.91425 1 GTATCAA 3130 0.0 40.08544 1 TCAACGC 3660 0.0 33.582077 4 CAACGCA 3840 0.0 31.906952 5 ATCAACG 3935 0.0 30.993973 3 TATCAAC 4010 0.0 30.29594 2 AACGCAG 4175 0.0 29.459503 6 GTACATG 5855 0.0 25.56882 1 ACGCAGA 4900 0.0 24.421892 7 TACATGG 6335 0.0 22.847681 2 CGCAGAG 5265 0.0 22.368052 8 GAGTACA 4465 0.0 21.394474 1 ACATGGG 6505 0.0 21.37515 3 TATACTG 1075 0.0 20.321054 5 CATGGGG 5500 0.0 19.586285 4 GCAGAGT 6245 0.0 18.17388 9 AGTACAT 5030 0.0 17.35956 2 AGAGTAC 4970 0.0 17.055483 10-11 GTACTAA 620 0.0 16.09736 1 ATACCGT 355 2.992965E-8 16.05222 6 >>END_MODULE