##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921668_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3759639 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.594474363097095 31.0 31.0 34.0 27.0 34.0 2 30.63474631473926 33.0 31.0 34.0 27.0 34.0 3 30.70512647623881 33.0 31.0 34.0 27.0 34.0 4 34.16167483101436 37.0 35.0 37.0 30.0 37.0 5 34.165946517737474 37.0 35.0 37.0 30.0 37.0 6 34.21703626332209 37.0 35.0 37.0 30.0 37.0 7 34.12603178124283 37.0 35.0 37.0 30.0 37.0 8 34.09475723600058 37.0 35.0 37.0 30.0 37.0 9 35.68078105371287 39.0 37.0 39.0 30.0 39.0 10-11 35.58478327307489 39.0 37.0 39.0 30.0 39.0 12-13 35.478902362700246 39.0 37.0 39.0 30.0 39.0 14-15 36.66223060245944 40.0 37.0 41.0 30.0 41.0 16-17 36.60347562625029 40.0 37.0 41.0 30.0 41.0 18-19 36.56234667743366 40.0 37.0 41.0 29.5 41.0 20-21 36.488004034429906 40.0 37.0 41.0 29.0 41.0 22-23 36.39613909739738 40.0 37.0 41.0 29.0 41.0 24-25 36.297333334397266 40.0 37.0 41.0 28.0 41.0 26-27 36.161581072012495 40.0 36.5 41.0 27.5 41.0 28-29 36.03206398273877 40.0 36.0 41.0 27.0 41.0 30-31 35.89505082801833 40.0 36.0 41.0 27.0 41.0 32-33 35.72586796232298 40.0 36.0 41.0 26.5 41.0 34-35 35.56744065055182 40.0 35.5 41.0 26.0 41.0 36-37 35.55077176292724 39.5 35.5 41.0 25.5 41.0 38-39 35.73919636965145 40.0 36.0 41.0 26.5 41.0 40-41 35.8110464861121 40.0 36.0 41.0 27.0 41.0 42-43 35.65887974882695 40.0 36.0 41.0 26.0 41.0 44-45 35.553191410132726 40.0 35.5 41.0 25.5 41.0 46-47 35.41156597747816 40.0 35.0 41.0 24.5 41.0 48-49 35.26405327745563 40.0 35.0 41.0 24.0 41.0 50-51 33.56274791276503 38.0 33.0 39.5 22.0 40.0 52-53 33.68508838215584 37.5 33.5 39.5 22.5 40.0 54-55 34.60918641390836 39.0 34.5 40.5 23.0 41.0 56-57 34.63313897956692 39.0 35.0 41.0 23.0 41.0 58-59 34.44666602298784 39.0 34.5 41.0 22.5 41.0 60-61 34.20062418226856 38.0 34.0 40.5 22.0 41.0 62-63 33.91344873803043 37.5 34.0 40.0 21.5 41.0 64-65 33.622549133041765 37.0 34.0 40.0 20.5 41.0 66-67 33.28318024682689 36.5 34.0 39.5 20.0 41.0 68-69 32.924370797302615 36.0 33.0 39.0 18.5 41.0 70-71 32.51189103528291 35.5 33.0 39.0 16.0 41.0 72-73 32.148130179519896 35.0 33.0 37.5 13.0 40.0 74-75 31.752037097178746 35.0 32.5 37.0 9.0 39.0 76-77 31.368547086568682 35.0 32.0 37.0 7.0 39.0 78-79 31.01837769530532 35.0 32.0 36.0 2.0 39.0 80-81 30.699839798448735 35.0 32.0 36.0 2.0 37.0 82-83 30.38039410166774 35.0 31.5 35.0 2.0 37.0 84-85 30.111131148495907 35.0 31.0 35.0 2.0 36.5 86-87 29.86934104577594 35.0 31.0 35.0 2.0 36.0 88-89 29.638004207318843 35.0 31.0 35.0 2.0 36.0 90-91 29.40795140171703 35.0 31.0 35.0 2.0 35.5 92-93 29.210674881285144 35.0 31.0 35.0 2.0 35.0 94-95 28.974165205755128 34.5 31.0 35.0 2.0 35.0 96-97 28.728441613676207 34.0 30.0 35.0 2.0 35.0 98-99 28.453694889323152 34.0 30.0 35.0 2.0 35.0 100-101 27.381633183398726 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 115604.0 3 20573.0 4 14077.0 5 10525.0 6 9558.0 7 9793.0 8 10627.0 9 11096.0 10 12165.0 11 13041.0 12 13065.0 13 13091.0 14 13611.0 15 14735.0 16 14658.0 17 14941.0 18 14839.0 19 14428.0 20 14631.0 21 15276.0 22 16721.0 23 19393.0 24 22834.0 25 27036.0 26 32283.0 27 38521.0 28 45344.0 29 54091.0 30 64905.0 31 79127.0 32 98134.0 33 127866.0 34 176517.0 35 257683.0 36 436719.0 37 815646.0 38 906484.0 39 169984.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.82223484242649 17.11360020097705 11.137620045331609 25.926544911264855 2 16.620697328508015 19.109642860565177 38.06740324079841 26.202256570128394 3 19.707688229169108 22.471610448291944 29.008260811239555 28.812440511299393 4 13.158738773316752 14.438480184636235 36.17672994661445 36.22605109543257 5 14.112518048799963 37.00535641805346 34.75997258578587 14.122152947360716 6 35.07406685236028 34.74022268868779 16.264807850737874 13.920902608214055 7 29.945881066034463 31.094338899872525 20.491081974330218 18.468698059762794 8 27.432296290305718 34.667752419600056 19.360977113793094 18.538974176301128 9 26.850641059743573 14.57940096823961 18.601798159280737 39.968159812736076 10-11 26.162400255057626 24.721875327949757 27.849909174958544 21.265815242034073 12-13 26.30965786083374 22.030141448915238 27.631630230839683 24.028570459411338 14-15 23.264548200593488 23.745585568133922 24.421946245577587 28.567919985695006 16-17 23.947038265971603 26.952146151207078 25.34026960300782 23.760545979813497 18-19 23.989677751609793 26.387544245760168 26.423881198911964 23.198896803718075 20-21 24.276928184856096 25.696507903063136 26.391226699378723 23.635337212702044 22-23 24.08547171834543 25.58911078004677 26.17080454222166 24.15461295938614 24-25 23.91734204393625 25.701710985313564 26.23430104555705 24.146645925193134 26-27 23.868512286551816 25.881111633878007 26.150888617262936 24.09948746230724 28-29 23.99632580227432 26.099306552372482 25.95975513860972 23.94461250674348 30-31 24.16838057914924 25.85297377504415 25.913093165236685 24.06555248056993 32-33 23.860913120909316 25.92096145431137 25.964387034305542 24.25373839047377 34-35 24.187357940754396 25.888730620425676 26.025147395818788 23.89876404300114 36-37 24.254508405312084 25.75286601705254 26.03762910392589 23.954996473709485 38-39 24.089924610634576 25.886328769983635 26.013580326547604 24.010166292834185 40-41 24.187156786639203 25.738626472282334 26.086469651729914 23.987747089348552 42-43 23.926521025698445 25.71992039466756 26.05476398991737 24.29879458971662 44-45 23.94211056187082 25.769035240438654 26.209155944487865 24.07969825320266 46-47 24.092302320684663 25.762518290683943 26.003995298394685 24.141184090236706 48-49 23.901151588630423 25.876139350660583 26.046224807874204 24.17648425283479 50-51 23.919790062790863 25.91393768461924 26.1189095141524 24.047362738437503 52-53 24.127223215034185 25.779545455454134 26.11030310477453 23.982928224737147 54-55 23.627812697610977 25.61330118028518 26.44045366982533 24.31843245227851 56-57 23.76528011132993 25.80096683358071 26.237045481532995 24.19670757355637 58-59 23.84123772623251 25.632997858130107 26.268214890727315 24.257549524910065 60-61 23.794149730807003 25.66330561962374 26.39075050943535 24.15179414013391 62-63 23.84600427610418 25.650947770251424 26.392542525486906 24.11050542815749 64-65 23.597281247680275 25.553331878918208 26.38060266893616 24.468784204465358 66-67 23.672284565831983 25.66044942304878 26.22600634295847 24.441259668160765 68-69 23.846273574584345 25.553232992571324 26.300644895459346 24.29984853738499 70-71 23.709438732068374 25.433011963876783 26.265577117876422 24.59197218617842 72-73 23.686992931694366 25.609654687150186 26.197107645070844 24.506244736084607 74-75 23.695448803031997 25.71894039946908 26.21561149046637 24.369999307032554 76-77 23.766576524451263 25.446169320074336 26.291935518689076 24.495318636785328 78-79 23.681392717342195 25.493580593440253 26.324791450920493 24.500235238297062 80-81 23.84841667831885 25.63341997936331 26.14265923823917 24.375504104078676 82-83 23.84465399801501 25.686502988817562 26.131593279819064 24.33724973334837 84-85 23.78794882293606 25.66563717555836 26.169186813983593 24.377227187521992 86-87 23.782305318226957 25.773932527889194 26.131528502828143 24.312233651055703 88-89 23.726768846860345 25.54004516261474 26.1667097675485 24.566476222976412 90-91 23.807820599284838 25.545173125353525 26.152086034830766 24.494920240530867 92-93 23.92240258865992 25.4476153354159 26.25786461150772 24.37211746441646 94-95 23.889793680424017 25.330627357136738 26.3042562202548 24.475322742184446 96-97 23.913998443641184 25.18230955702167 26.309689806783 24.59400219255414 98-99 23.883050306311734 25.193135364391317 26.21008632451914 24.71372800477781 100-101 24.113054326880643 25.100968503053117 26.289633153771558 24.496344016294678 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 23.0 2 52.5 3 90.0 4 83.5 5 87.0 6 161.0 7 285.0 8 453.0 9 524.5 10 476.0 11 470.5 12 547.5 13 648.5 14 742.0 15 829.5 16 898.5 17 983.0 18 1128.0 19 1304.0 20 1426.0 21 1543.5 22 1710.5 23 1983.0 24 2286.0 25 2636.5 26 3245.0 27 4336.5 28 6015.5 29 8716.0 30 12850.5 31 18518.5 32 27098.0 33 34395.5 34 40154.5 35 48496.5 36 58799.5 37 69707.5 38 80961.5 39 90944.0 40 100177.0 41 110440.5 42 120484.5 43 130553.5 44 140336.5 45 150733.5 46 157103.5 47 161125.0 48 167346.5 49 170587.0 50 169979.0 51 168763.0 52 167773.5 53 166295.5 54 162424.0 55 153065.5 56 139684.0 57 125351.0 58 113047.5 59 99173.0 60 81290.0 61 66353.0 62 54250.0 63 41524.5 64 30133.0 65 21987.0 66 16352.0 67 12497.0 68 9397.0 69 6918.0 70 5188.5 71 3762.5 72 2693.5 73 1930.0 74 1416.0 75 1012.5 76 714.5 77 470.0 78 311.5 79 224.0 80 175.5 81 148.5 82 112.5 83 98.0 84 90.5 85 80.5 86 72.0 87 67.5 88 55.0 89 39.0 90 34.5 91 33.0 92 28.0 93 23.0 94 21.5 95 19.0 96 14.5 97 9.5 98 10.0 99 11.0 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05309020360731442 2 0.0741294576420768 3 0.06976733670440168 4 0.06995352479320488 5 0.06553820725872883 6 0.010639319360183253 7 0.013591730482634103 8 0.017288893960297785 9 0.006356993317709492 10-11 0.012993268768623795 12-13 0.02291443407199468 14-15 0.040190028883092234 16-17 0.027622332888875768 18-19 0.01012065254137432 20-21 0.02074667275235734 22-23 0.0369716347766368 24-25 0.034777275158599005 26-27 0.021105749780763527 28-29 0.011995832578606617 30-31 0.012035730026207303 32-33 0.008883831665753015 34-35 0.0054260528736934585 36-37 5.984617140103079E-4 38-39 0.004162633699671697 40-41 0.0011304276820194705 42-43 0.22964970838955548 44-45 0.19912816097502978 46-47 0.2055782483371409 48-49 0.21266669486086298 50-51 0.20374296574750925 52-53 0.2114431731344419 54-55 0.20724064198716952 56-57 0.21032604460162266 58-59 0.2192763720133768 60-61 0.22414386062066066 62-63 0.20904932627840064 64-65 0.2086503518023938 66-67 0.20645599218435598 68-69 0.20102993931066254 70-71 0.19310364638732602 72-73 0.20424833341711798 74-75 0.20371636744910882 76-77 0.19735937413139934 78-79 0.21608457620532184 80-81 0.2275085453683186 82-83 0.22581955341988955 84-85 0.21999452607018918 86-87 0.2403821217941403 88-89 0.2327085127056082 90-91 0.23987675412453163 92-93 0.23454379529523978 94-95 0.2374829072684904 96-97 0.24519641380462326 98-99 0.2384936426077078 100-101 0.24502352486502027 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3759639.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.51199053099793 #Duplication Level Percentage of deduplicated Percentage of total 1 76.91361150464887 44.234548965602194 2 12.547550778275246 14.432692430947633 3 4.264931159851975 7.3585404144229445 4 1.9853871420082567 4.567342660461756 5 1.105762625016202 3.1797304809731615 6 0.6840624525490275 2.360507597616653 7 0.46684162950605634 1.8794293962939568 8 0.3517452255039284 1.6183654462804529 9 0.24265522531044909 1.2560026518316543 >10 1.3465662058770125 13.546123467014306 >50 0.06857621343262117 2.65848918944224 >100 0.02073220684321173 1.9760287837316735 >500 9.744192759022606E-4 0.3876688464786453 >1k 6.032119013089061E-4 0.544529668902729 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.979489520137439E-5 2 0.0 0.0 0.0 0.0 7.979489520137439E-5 3 0.0 0.0 0.0 0.0 7.979489520137439E-5 4 0.0 0.0 0.0 2.659829840045813E-5 7.979489520137439E-5 5 0.0 7.979489520137439E-5 0.0 2.659829840045813E-5 7.979489520137439E-5 6 0.0 7.979489520137439E-5 0.0 2.659829840045813E-5 7.979489520137439E-5 7 0.0 7.979489520137439E-5 0.0 2.659829840045813E-5 7.979489520137439E-5 8 0.0 7.979489520137439E-5 0.0 2.659829840045813E-5 7.979489520137439E-5 9 0.0 7.979489520137439E-5 0.0 2.659829840045813E-5 7.979489520137439E-5 10-11 0.0 7.979489520137439E-5 0.0 6.649574600114532E-5 7.979489520137439E-5 12-13 0.0 1.0639319360183252E-4 0.0 7.979489520137439E-5 9.309404440160346E-5 14-15 0.0 1.3299149200229063E-4 0.0 9.309404440160346E-5 1.1969234280206158E-4 16-17 0.0 1.5958979040274878E-4 0.0 1.0639319360183252E-4 1.4629064120251972E-4 18-19 0.0 1.9948723800343595E-4 0.0 1.0639319360183252E-4 1.5958979040274878E-4 20-21 0.0 2.1278638720366504E-4 0.0 1.3299149200229063E-4 1.861880888032069E-4 22-23 0.0 2.1278638720366504E-4 0.0 2.1278638720366504E-4 2.7928213320481035E-4 24-25 0.0 2.5268383480435224E-4 0.0 3.856753268066429E-4 3.723761776064138E-4 26-27 0.0 2.6598298400458127E-4 0.0 7.846498028135148E-4 3.723761776064138E-4 28-29 0.0 2.7928213320481035E-4 0.0 0.005718634156098498 3.723761776064138E-4 30-31 0.0 2.9258128240503944E-4 0.0 0.023938468560412318 3.723761776064138E-4 32-33 0.0 2.9258128240503944E-4 0.0 0.05785129902099643 3.9897447600687196E-4 34-35 0.0 2.9258128240503944E-4 0.0 0.10108683307094113 3.9897447600687196E-4 36-37 0.0 3.1917958080549756E-4 0.0 0.17258305917137257 3.9897447600687196E-4 38-39 0.0 3.7237617760641384E-4 0.0 0.2937649066838598 3.9897447600687196E-4 40-41 0.0 3.9897447600687196E-4 0.0 0.4287379719169846 4.1227362520710104E-4 42-43 0.0 4.255727744073301E-4 0.0 0.5674613972245739 4.654702220080173E-4 44-45 0.0 4.255727744073301E-4 0.0 0.7336209673322358 5.186668188089335E-4 46-47 0.0 4.255727744073301E-4 0.0 0.9297834180356146 5.452651172093916E-4 48-49 0.0 4.255727744073301E-4 0.0 1.136438897457974 5.585642664096207E-4 50-51 0.0 4.388719236075591E-4 0.0 1.3591464499650099 5.585642664096207E-4 52-53 0.0 4.521710728077882E-4 0.0 1.5803910960600205 6.649574600114533E-4 54-55 0.0 4.654702220080173E-4 0.0 1.8243905864366234 7.314532060125985E-4 56-57 0.0 4.787693712082463E-4 0.0 2.1058803784086715 7.447523552128276E-4 58-59 0.0 4.787693712082463E-4 0.0 2.406760329914654 7.580515044130567E-4 60-61 0.0 4.787693712082463E-4 0.0 2.7311797755050415 7.713506536132857E-4 62-63 2.659829840045813E-5 4.787693712082463E-4 0.0 3.0635255140187665 8.511455488146602E-4 64-65 2.659829840045813E-5 5.053676696087045E-4 0.0 3.4049944688838476 8.511455488146602E-4 66-67 2.659829840045813E-5 5.053676696087045E-4 0.0 3.7938083949017445 8.777438472151182E-4 68-69 2.659829840045813E-5 5.053676696087045E-4 0.0 4.220498297841894 8.777438472151182E-4 70-71 2.659829840045813E-5 5.186668188089335E-4 0.0 4.674837131969319 9.043421456155764E-4 72-73 2.659829840045813E-5 5.319659680091625E-4 0.0 5.147103219218653 0.001063931936018325 74-75 2.659829840045813E-5 5.319659680091625E-4 0.0 5.617480827281556 0.0011038293836190124 76-77 2.659829840045813E-5 5.319659680091625E-4 0.0 6.13159933706401 0.0011171285328192414 78-79 2.659829840045813E-5 5.452651172093916E-4 0.0 6.716323029950482 0.0011171285328192414 80-81 2.659829840045813E-5 5.984617140103079E-4 0.0 7.321846592186112 0.0011304276820194705 82-83 2.659829840045813E-5 6.117608632105369E-4 0.0 7.9496728276305255 0.0012767183232219902 84-85 2.659829840045813E-5 6.117608632105369E-4 0.0 8.578602892458559 0.0012767183232219902 86-87 2.659829840045813E-5 6.383591616109951E-4 0.0 9.240435052407957 0.0013166157708226775 88-89 2.659829840045813E-5 6.383591616109951E-4 0.0 9.963562991021213 0.0013565132184233646 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2485 0.0 37.817596 1 GTATCAA 3760 0.0 37.616943 1 CAACGCA 4025 0.0 32.778835 5 TCAACGC 4040 0.0 32.77722 4 ATCAACG 4225 0.0 31.455181 3 GTACATG 8675 0.0 31.404905 1 TACATGG 8835 0.0 29.924892 2 AACGCAG 4410 0.0 29.901669 6 TATCAAC 4660 0.0 29.131584 2 ACATGGG 9170 0.0 27.898466 3 CATGGGG 8155 0.0 24.211332 4 ACGCAGA 5350 0.0 23.852184 7 GAGTACA 6125 0.0 23.40216 1 CGCAGAG 5785 0.0 21.813498 8 AGTACAT 6595 0.0 19.86453 2 GTATAGC 1020 0.0 19.543585 1 ATGGGGG 5240 0.0 19.200794 5 TATACCG 295 6.413211E-8 17.696417 5 GTGTAGC 1945 0.0 17.569847 1 GCAGAGT 7390 0.0 16.24182 9 >>END_MODULE