##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921667_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3602076 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.342971664118135 31.0 31.0 34.0 26.0 34.0 2 30.374176447137707 31.0 31.0 34.0 26.0 34.0 3 30.44107981064253 33.0 31.0 34.0 26.0 34.0 4 33.894479461288434 37.0 35.0 37.0 30.0 37.0 5 33.89230071769724 37.0 35.0 37.0 30.0 37.0 6 33.941342159354775 37.0 35.0 37.0 30.0 37.0 7 33.84754041835875 37.0 35.0 37.0 29.0 37.0 8 33.81803993030686 37.0 35.0 37.0 29.0 37.0 9 35.37611477381377 39.0 37.0 39.0 30.0 39.0 10-11 35.271957893170494 39.0 35.0 39.0 29.0 39.0 12-13 35.155961589927585 39.0 35.0 39.0 28.0 39.0 14-15 36.30373609551825 40.0 37.0 41.0 28.0 41.0 16-17 36.23994760243815 40.0 37.0 41.0 27.0 41.0 18-19 36.198647807542095 40.0 36.5 41.0 27.0 41.0 20-21 36.114907209064995 40.0 36.5 41.0 27.0 41.0 22-23 36.01235454221399 40.0 36.0 41.0 27.0 41.0 24-25 35.90373412443269 40.0 36.0 41.0 27.0 41.0 26-27 35.75971523088353 40.0 36.0 41.0 27.0 41.0 28-29 35.62109891629161 40.0 36.0 41.0 26.0 41.0 30-31 35.47690442955673 40.0 36.0 41.0 25.0 41.0 32-33 35.30914186707888 39.5 35.0 41.0 25.0 41.0 34-35 35.140316167676644 39.0 35.0 41.0 24.5 41.0 36-37 35.1149346932158 39.0 35.0 41.0 24.5 41.0 38-39 35.29790168225212 39.5 35.0 41.0 24.5 41.0 40-41 35.364627648056285 40.0 35.0 41.0 24.5 41.0 42-43 35.20838760759074 40.0 35.0 41.0 24.0 41.0 44-45 35.092172958038645 40.0 35.0 41.0 23.5 41.0 46-47 34.93531521822416 40.0 35.0 41.0 23.0 41.0 48-49 34.76924223697668 39.0 35.0 41.0 22.0 41.0 50-51 33.060884056860544 37.0 32.5 39.5 18.5 40.0 52-53 33.17519535956487 37.5 32.5 39.5 18.0 40.0 54-55 34.08108754507123 38.5 34.0 40.5 20.0 41.0 56-57 34.087234694659415 38.5 34.0 41.0 19.5 41.0 58-59 33.88359657042217 38.0 34.0 40.5 18.0 41.0 60-61 33.62172411131803 37.5 34.0 40.0 17.0 41.0 62-63 33.32099877959266 37.0 33.5 40.0 13.5 41.0 64-65 33.02033688350829 36.5 33.0 40.0 12.5 41.0 66-67 32.6753438850263 36.0 33.0 39.0 9.0 41.0 68-69 32.30661068783668 35.5 33.0 39.0 7.5 41.0 70-71 31.90230453216423 35.0 32.0 38.5 4.0 40.0 72-73 31.547697216827185 35.0 32.0 37.0 2.0 39.5 74-75 31.15825540604918 35.0 32.0 37.0 2.0 39.0 76-77 30.790530516291163 35.0 32.0 36.0 2.0 39.0 78-79 30.458965191184195 35.0 31.0 36.0 2.0 37.5 80-81 30.152981919315415 35.0 31.0 35.5 2.0 37.0 82-83 29.848408251241786 35.0 31.0 35.0 2.0 37.0 84-85 29.594924565722657 35.0 31.0 35.0 2.0 36.0 86-87 29.361884091285134 35.0 31.0 35.0 2.0 36.0 88-89 29.135334457129723 35.0 30.0 35.0 2.0 36.0 90-91 28.910201506020417 34.0 30.0 35.0 2.0 35.0 92-93 28.706531733367093 34.0 30.0 35.0 2.0 35.0 94-95 28.46860407720437 34.0 30.0 35.0 2.0 35.0 96-97 28.217268736139935 34.0 29.5 35.0 2.0 35.0 98-99 27.93355109664538 34.0 29.0 35.0 2.0 35.0 100-101 26.850231366578605 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 128596.0 3 22165.0 4 14982.0 5 11482.0 6 10363.0 7 10620.0 8 11253.0 9 11665.0 10 12830.0 11 13771.0 12 13620.0 13 13536.0 14 14123.0 15 14847.0 16 14841.0 17 15164.0 18 14907.0 19 14533.0 20 14723.0 21 15750.0 22 17292.0 23 20059.0 24 23556.0 25 27793.0 26 32578.0 27 39222.0 28 45917.0 29 55044.0 30 65360.0 31 79896.0 32 99418.0 33 129108.0 34 177437.0 35 257964.0 36 437083.0 37 788662.0 38 784931.0 39 126969.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.975201928738876 16.889991889519703 11.101969846789695 26.032836334951725 2 16.96261906832293 19.04301392217661 37.49350258604715 26.500864423453308 3 20.009862097320845 22.17577313286884 28.72376126501539 29.090603504794927 4 13.555722361062186 14.221617104688544 35.3027001379016 36.91996039634766 5 14.477438051103638 36.68656394677293 34.23002581794322 14.605972184180219 6 35.47208000621925 34.0192185955599 16.099891163110957 14.408810235109893 7 30.43747823909206 30.820914460682097 20.04588462706732 18.69572267315852 8 27.961314556493512 33.978405412474615 19.207970771837406 18.85230925919447 9 27.190134041111865 14.493403444867681 18.374015791753195 39.94244672226726 10-11 26.560031496885017 24.419331712954094 27.36075317092891 21.65988361923198 12-13 26.65029661577012 21.697587976759454 27.25210840998175 24.40000699748868 14-15 23.68792470814073 23.37327825527646 24.032787440692218 28.906009595890588 16-17 24.34948558099496 26.565249989586658 24.979326048623356 24.105938380795024 18-19 24.38736757584512 25.91518829207563 26.098822191493177 23.598621940586074 20-21 24.664253889201422 25.26246868563235 26.075142820172925 23.998134604993304 22-23 24.60326419990277 25.027740436440276 25.836021284770666 24.532974078886287 24-25 24.405433945706363 25.240312617809664 25.842095652940632 24.51215778354334 26-27 24.23457618515478 25.48250942804992 25.82404759098278 24.45886679581252 28-29 24.38092199819167 25.611435706221 25.69424459482853 24.313397700758802 30-31 24.52393886215665 25.43168582193039 25.552546607270056 24.491828708642906 32-33 24.288828628376777 25.522083731632982 25.532967272470835 24.656120367519403 34-35 24.626357233939945 25.45018563798081 25.661379554085716 24.262077573993526 36-37 24.692661635465967 25.280520347268336 25.67165807527701 24.355159941988685 38-39 24.45847177739971 25.484156298168543 25.65657746278668 24.40079446164507 40-41 24.58171972247397 25.30959882322256 25.75176486771873 24.35691658658474 42-43 24.434289616003912 25.279206771468505 25.656110523561214 24.630393088966372 44-45 24.314798723168003 25.39315488541779 25.79690738740102 24.495139004013186 46-47 24.497708156115767 25.340146462148557 25.68578678480368 24.476358596932005 48-49 24.307891877696626 25.441604005283963 25.676619833661206 24.573884283358204 50-51 24.291667634452587 25.54198213590051 25.7814830726941 24.384867156952808 52-53 24.508035110096344 25.319467520518096 25.7587540519808 24.41374331740476 54-55 24.058394932169996 25.210771294629165 26.037555296387243 24.693278476813592 56-57 24.120470632744833 25.409884177832303 25.88793054286338 24.581714646559483 58-59 24.191529122033693 25.23631840449988 25.937838459674456 24.634314013791975 60-61 24.141178113753185 25.275098585600762 26.042652192281952 24.5410711083641 62-63 24.159933192175284 25.29605010141765 26.024757784776494 24.519258921630577 64-65 24.000654284863447 25.204251905792436 25.976444354004276 24.81864945533984 66-67 24.01713659903435 25.2479290679881 25.89872983207502 24.836204500902532 68-69 24.155757637711062 25.184012283479678 25.940255725023626 24.719974353785634 70-71 24.071487665426687 25.078145827617053 25.929937782334267 24.92042872462199 72-73 24.146126967476544 25.214326237642837 25.82973486120795 24.809811933672673 74-75 24.037693772452375 25.349276162349593 25.900615874316635 24.7124141908814 76-77 24.136532623649106 25.088464831300723 25.928359201983525 24.846643343066642 78-79 24.077385435884256 25.154954345168967 25.954976267388762 24.812683951558014 80-81 24.22155264194308 25.28015507527492 25.78271126036083 24.71558102242117 82-83 24.16280286537806 25.28729667831105 25.81956431707576 24.730336139235128 84-85 24.13504146406436 25.32234023833056 25.835781021887655 24.706837275717422 86-87 24.135751899742992 25.391288063035738 25.80270889381363 24.67025114340764 88-89 24.06217049416884 25.192244631806993 25.81942826551539 24.92615660850878 90-91 24.101946350455503 25.22798044174563 25.84180898965669 24.82826421814218 92-93 24.265523561109013 25.1260387405044 25.91436085485827 24.694076843528315 94-95 24.247814550500227 24.948775103399367 25.9802991976401 24.823111148460303 96-97 24.24798699073325 24.8077155070276 25.99219382772239 24.952103674516763 98-99 24.18163639884954 24.83149659848802 25.916229419516846 25.0706375831456 100-101 24.415240643794643 24.748013326491243 25.995284746332487 24.841461283381623 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 32.0 2 65.0 3 100.0 4 93.5 5 100.0 6 170.5 7 306.5 8 512.5 9 619.0 10 541.0 11 493.5 12 528.5 13 620.5 14 737.5 15 818.0 16 906.0 17 986.0 18 1107.5 19 1241.0 20 1365.0 21 1506.0 22 1617.5 23 1777.5 24 2020.0 25 2326.0 26 2786.0 27 3565.0 28 4723.0 29 6563.0 30 9636.0 31 14212.5 32 21128.5 33 27102.0 34 32186.5 35 39575.0 36 49393.5 37 59170.5 38 68411.5 39 78394.0 40 87691.0 41 96165.5 42 104559.5 43 114543.0 44 124433.5 45 134542.0 46 143632.5 47 150928.5 48 158020.5 49 162257.0 50 164151.5 51 165772.0 52 166074.0 53 166312.5 54 164952.5 55 157335.0 56 145462.0 57 132008.5 58 119359.5 59 105641.5 60 88748.5 61 73709.0 62 60762.5 63 46824.5 64 33964.0 65 24688.0 66 18344.5 67 13944.5 68 10539.5 69 7831.0 70 5830.0 71 4240.0 72 3071.5 73 2260.0 74 1681.0 75 1203.5 76 828.0 77 556.5 78 359.5 79 253.5 80 184.0 81 137.0 82 120.5 83 100.0 84 82.5 85 77.5 86 73.5 87 58.5 88 50.5 89 42.5 90 35.5 91 33.5 92 27.5 93 25.0 94 22.5 95 16.0 96 12.5 97 11.0 98 10.5 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04986013621034092 2 0.07126445971711869 3 0.06762766804476086 4 0.06685033852700498 5 0.06257502617934768 6 0.009883189582896086 7 0.012048607525216014 8 0.017156772927611745 9 0.005441306624291103 10-11 0.012492795821076512 12-13 0.021765226497164412 14-15 0.0379780992960726 16-17 0.025707397622926335 18-19 0.009563929245246353 20-21 0.01926666733294911 22-23 0.0356877533955419 24-25 0.033133670694344045 26-27 0.020030115966459344 28-29 0.011368444197179627 30-31 0.01142396773416219 32-33 0.00852286292682331 34-35 0.004802785948991637 36-37 5.552353698256228E-4 38-39 0.003886647588779359 40-41 9.855427814404803E-4 42-43 0.22362104519726955 44-45 0.1923335321075957 46-47 0.1986076917866253 48-49 0.20611725016351684 50-51 0.19712243717234174 52-53 0.2049790176553743 54-55 0.20109237006659492 56-57 0.20379914249449485 58-59 0.21284947902265247 60-61 0.21833242829968053 62-63 0.2023138878802113 64-65 0.20298017032400203 66-67 0.19980144783175036 68-69 0.19442954562868744 70-71 0.1864063945347072 72-73 0.19842724029143197 74-75 0.19726124601479814 76-77 0.19050125538717116 78-79 0.20958747122492696 80-81 0.22071994038993067 82-83 0.22002589617764867 84-85 0.21372397473012786 86-87 0.23408723191848257 88-89 0.2263278176251695 90-91 0.2332404979794985 92-93 0.2287708532524022 94-95 0.23221331254532107 96-97 0.23979227534344083 98-99 0.23264361995693597 100-101 0.2396395856167388 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3602076.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.257619100472844 #Duplication Level Percentage of deduplicated Percentage of total 1 76.70622013506241 42.38603094860299 2 12.200138031534191 13.483011606394179 3 4.27250389031667 7.0826517772922095 4 2.0805033360908802 4.598546435318916 5 1.1697233572582222 3.2318063864150584 6 0.7348238947668133 2.436277132977031 7 0.49600342347329607 1.9185577772772548 8 0.379597153451903 1.6780507933655198 9 0.27949735809466525 1.3899922697865126 >10 1.5685187259371003 15.56105708958527 >50 0.08508188574455576 3.179918281185589 >100 0.02597909542040231 2.2487797430190604 >500 7.552033167426193E-4 0.28822029081628203 >1k 6.545095320960899E-4 0.5170994679640984 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.776176849128114E-5 0.0 0.0 0.0 3 0.0 2.776176849128114E-5 0.0 0.0 0.0 4 0.0 2.776176849128114E-5 0.0 0.0 2.776176849128114E-5 5 0.0 2.776176849128114E-5 0.0 0.0 2.776176849128114E-5 6 0.0 2.776176849128114E-5 0.0 0.0 5.552353698256228E-5 7 0.0 2.776176849128114E-5 0.0 0.0 5.552353698256228E-5 8 0.0 2.776176849128114E-5 0.0 0.0 8.328530547384342E-5 9 0.0 2.776176849128114E-5 0.0 0.0 1.9433237943896798E-4 10-11 0.0 2.776176849128114E-5 0.0 0.0 1.9433237943896798E-4 12-13 0.0 2.776176849128114E-5 0.0 2.776176849128114E-5 3.0537945340409253E-4 14-15 0.0 2.776176849128114E-5 0.0 2.776176849128114E-5 3.8866475887793596E-4 16-17 0.0 2.776176849128114E-5 0.0 2.776176849128114E-5 4.164265273692171E-4 18-19 0.0 2.776176849128114E-5 0.0 2.776176849128114E-5 4.997118328430605E-4 20-21 0.0 2.776176849128114E-5 0.0 1.1104707396512456E-4 4.997118328430605E-4 22-23 0.0 2.776176849128114E-5 0.0 2.359750321758897E-4 5.413544855799822E-4 24-25 0.0 2.776176849128114E-5 0.0 3.609029903866548E-4 6.107589068081851E-4 26-27 0.0 2.776176849128114E-5 0.0 8.189721704927936E-4 6.801633280363879E-4 28-29 0.0 2.776176849128114E-5 0.0 0.005954899341379804 6.940442122820284E-4 30-31 0.0 4.164265273692171E-5 0.0 0.0253187328640484 6.940442122820284E-4 32-33 0.0 5.552353698256228E-5 0.0 0.05810538145225143 7.218059807733096E-4 34-35 2.776176849128114E-5 5.552353698256228E-5 0.0 0.10320437436633764 7.218059807733096E-4 36-37 2.776176849128114E-5 5.552353698256228E-5 0.0 0.17766143745995366 7.218059807733096E-4 38-39 4.164265273692171E-5 5.552353698256228E-5 0.0 0.2987305098504307 7.495677492645907E-4 40-41 5.552353698256228E-5 5.552353698256228E-5 0.0 0.43219521187226473 7.495677492645907E-4 42-43 5.552353698256228E-5 5.552353698256228E-5 0.0 0.5710595778656531 7.495677492645907E-4 44-45 5.552353698256228E-5 5.552353698256228E-5 0.0 0.7390876816591321 7.634486335102314E-4 46-47 5.552353698256228E-5 5.552353698256228E-5 0.0 0.9391667471757953 8.606148232297153E-4 48-49 5.552353698256228E-5 5.552353698256228E-5 0.0 1.149267811117811 9.161383602122776E-4 50-51 5.552353698256228E-5 5.552353698256228E-5 0.0 1.3736245431800995 9.439001287035587E-4 52-53 5.552353698256228E-5 5.552353698256228E-5 0.0 1.595080170435049 9.577810129491992E-4 54-55 8.328530547384342E-5 5.552353698256228E-5 0.0 1.849239160972728 9.99423665686121E-4 56-57 8.328530547384342E-5 5.552353698256228E-5 0.0 2.1400992094558804 0.001027185434177402 58-59 8.328530547384342E-5 5.552353698256228E-5 0.0 2.448143792635136 0.001027185434177402 60-61 8.328530547384342E-5 5.552353698256228E-5 0.0 2.7718598941277195 0.0010549472026686834 62-63 1.388088424564057E-4 5.552353698256228E-5 0.0 3.1034603378718275 0.0010549472026686834 64-65 1.388088424564057E-4 6.940442122820285E-5 0.0 3.453897141537269 0.0010827089711599644 66-67 1.388088424564057E-4 8.328530547384342E-5 0.0 3.863563678278859 0.001124351623896886 68-69 1.5268972670204626E-4 8.328530547384342E-5 0.0 4.306710907820934 0.0011382325081425266 70-71 1.6657061094768684E-4 8.328530547384342E-5 0.0 4.766723411721463 0.0012353986978620108 72-73 1.6657061094768684E-4 8.328530547384342E-5 0.0 5.244600613646131 0.0014019693088096975 74-75 1.6657061094768684E-4 9.716618971948399E-5 0.0 5.72912675912446 0.00145749284579226 76-77 1.6657061094768684E-4 1.1104707396512456E-4 0.0 6.269190322469598 0.0014991354985291814 78-79 1.6657061094768684E-4 1.1104707396512456E-4 0.0 6.8673315054984965 0.0015268972670204627 80-81 1.6657061094768684E-4 1.1104707396512456E-4 0.0 7.4876126988991905 0.0015546590355117438 82-83 1.6657061094768684E-4 1.1104707396512456E-4 0.0 8.135600137254183 0.001582420804003025 84-85 1.6657061094768684E-4 1.1104707396512456E-4 0.0 8.794206452057091 0.001582420804003025 86-87 1.6657061094768684E-4 1.2492795821076512E-4 0.0 9.4907075808506 0.001582420804003025 88-89 1.6657061094768684E-4 1.6657061094768684E-4 0.0 10.247090844279798 0.001582420804003025 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2265 0.0 45.478264 1 GTATCAA 4015 0.0 38.779358 1 TCAACGC 4455 0.0 34.095455 4 CAACGCA 4640 0.0 32.734684 5 GTACATG 9160 0.0 31.87073 1 AACGCAG 4975 0.0 30.419395 6 ATCAACG 5055 0.0 29.860298 3 TACATGG 9675 0.0 29.586716 2 ACATGGG 9965 0.0 27.722597 3 TATCAAC 5520 0.0 27.691545 2 ACGCAGA 6035 0.0 24.607885 7 CATGGGG 8615 0.0 24.573883 4 GAGTACA 6805 0.0 23.856695 1 CGCAGAG 6375 0.0 22.627512 8 AGTACAT 6995 0.0 20.970135 2 GTATTAG 785 0.0 20.559929 1 ATGGGGG 4915 0.0 19.990467 5 GTATAGA 1020 0.0 18.150005 1 GCAGAGT 7725 0.0 17.874914 9 ACCGTAT 425 3.6379788E-12 17.863825 8 >>END_MODULE