##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921667_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3602076 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.305700101830165 33.0 31.0 34.0 28.0 34.0 2 31.428899612334664 34.0 31.0 34.0 28.0 34.0 3 31.508229698651554 34.0 31.0 34.0 28.0 34.0 4 34.97888051223794 37.0 35.0 37.0 32.0 37.0 5 34.71000028872239 37.0 35.0 37.0 32.0 37.0 6 34.68855182400371 37.0 35.0 37.0 32.0 37.0 7 34.56590505030988 37.0 35.0 37.0 32.0 37.0 8 34.511607473023886 37.0 35.0 37.0 31.0 37.0 9 36.100691101464825 39.0 37.0 39.0 32.0 39.0 10-11 35.9896044669796 39.0 37.0 39.0 31.0 39.0 12-13 35.90206092264572 39.0 37.0 39.0 31.0 39.0 14-15 37.14611615634984 40.0 38.0 41.0 31.0 41.0 16-17 37.10670360647582 40.0 38.0 41.0 31.0 41.0 18-19 37.05376010944799 40.0 38.0 41.0 31.0 41.0 20-21 36.98825899286967 40.0 38.0 41.0 31.0 41.0 22-23 36.89425639547861 40.0 37.0 41.0 30.0 41.0 24-25 36.81007827153009 40.0 37.0 41.0 30.0 41.0 26-27 36.68164913788604 40.0 37.0 41.0 30.0 41.0 28-29 36.55828458366786 40.0 37.0 41.0 30.0 41.0 30-31 36.408641155822366 40.0 37.0 41.0 29.5 41.0 32-33 36.36548493146729 40.0 36.5 41.0 29.5 41.0 34-35 36.506658798981476 40.0 37.0 41.0 30.0 41.0 36-37 36.50558386330549 40.0 37.0 41.0 30.0 41.0 38-39 36.404945092774284 40.0 37.0 41.0 30.0 41.0 40-41 36.320198407807055 40.0 37.0 41.0 29.0 41.0 42-43 36.19593631561355 40.0 36.0 41.0 29.0 41.0 44-45 36.067505932689926 40.0 36.0 41.0 28.0 41.0 46-47 35.91305277845331 40.0 36.0 41.0 28.0 41.0 48-49 35.76581351975916 40.0 35.0 41.0 27.5 41.0 50-51 35.59805012442825 39.5 35.0 41.0 27.0 41.0 52-53 35.4104796789407 39.0 35.0 41.0 26.5 41.0 54-55 35.18596428837148 39.0 35.0 41.0 26.0 41.0 56-57 34.94724250682107 39.0 35.0 41.0 26.0 41.0 58-59 34.690132440292764 38.0 35.0 40.0 26.0 41.0 60-61 34.39808349407397 38.0 34.0 40.0 25.5 41.0 62-63 34.07858301712679 37.0 34.0 40.0 24.5 41.0 64-65 33.726858067403356 36.5 34.0 39.5 23.5 41.0 66-67 33.37110030438003 36.0 34.0 39.0 23.0 41.0 68-69 33.00298952603998 35.5 33.0 39.0 22.0 40.5 70-71 32.60538908673776 35.0 33.0 38.0 21.5 40.0 72-73 32.2471359571536 35.0 33.0 37.0 20.5 39.5 74-75 31.853708528082137 35.0 33.0 37.0 19.5 39.0 76-77 29.179700261737953 33.0 28.5 34.5 13.0 36.5 78-79 30.751149614833224 34.5 31.5 35.0 15.0 37.0 80-81 30.94116212428611 35.0 32.0 35.0 17.0 37.0 82-83 30.77438246722168 35.0 32.0 35.0 14.0 36.5 84-85 30.58841221006997 35.0 32.0 35.0 11.0 36.0 86-87 30.38953231414329 35.0 32.0 35.0 7.0 36.0 88-89 30.128391377638895 35.0 31.5 35.0 2.0 35.5 90-91 29.93278501064386 34.0 31.0 35.0 2.0 35.0 92-93 29.775167014799244 34.0 31.0 35.0 2.0 35.0 94-95 29.67240308089002 34.0 31.0 35.0 2.0 35.0 96-97 29.464325433444493 34.0 31.0 35.0 2.0 35.0 98-99 29.257378661638455 34.0 31.0 35.0 2.0 35.0 100-101 28.130960868121605 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 74282.0 3 24819.0 4 13431.0 5 9698.0 6 8324.0 7 8208.0 8 8487.0 9 9057.0 10 9850.0 11 10672.0 12 11168.0 13 11931.0 14 12796.0 15 13426.0 16 14195.0 17 15010.0 18 14474.0 19 13469.0 20 13088.0 21 12978.0 22 13495.0 23 15622.0 24 18780.0 25 22322.0 26 26710.0 27 32550.0 28 38899.0 29 47391.0 30 57765.0 31 71796.0 32 90503.0 33 120373.0 34 171738.0 35 258311.0 36 463763.0 37 891114.0 38 856858.0 39 94723.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.851819894952534 18.327054157922674 11.62020521767082 27.20092072945397 2 16.088021731978742 20.28083890768212 35.89565985066899 27.735479509670146 3 18.643565214107863 23.2381551562913 28.4893729024004 29.628906727200437 4 13.248506318992515 15.32905403904671 34.2107367345579 37.21170290740288 5 14.291446452615785 36.931232681269265 34.259618447136546 14.517702418978399 6 35.56002035534118 34.55877188331048 15.732080178722782 14.149127582625557 7 30.26074408202381 30.982355730417684 20.0436359477146 18.713264239843912 8 27.884475508012603 34.38308908529415 19.019087881543864 18.713347525149384 9 26.97078767099519 14.447505951430772 18.19198656330032 40.38971981427372 10-11 26.504353405266308 24.607589416840202 27.302416367331716 21.585640810561774 12-13 26.5507905740761 21.819797305213175 27.254275740644395 24.37513638006633 14-15 23.555715593947497 23.50125842833261 23.95659973511302 28.986426242606882 16-17 24.29083950477447 26.82711303148518 24.829959167990904 24.052088295749453 18-19 24.348882619874768 26.139239390569653 25.929565345218148 23.582312644337435 20-21 24.598115886042574 25.39446475764107 25.962805496681142 24.044613859635216 22-23 24.474941672524402 25.141376806041848 25.81328100795208 24.57040051348167 24-25 24.288708408654887 25.433346200982687 25.7881157610937 24.489829629268726 26-27 24.16866938378223 25.610459132008312 25.779005250304586 24.441866233904864 28-29 24.310185356777126 25.744056976730146 25.677355911470407 24.268401755022325 30-31 24.4366958599124 25.547116521422357 25.530720657233978 24.485466961431264 32-33 24.217926927985406 25.646060665628546 25.454373060894824 24.681639345491224 34-35 24.503971903552635 25.581299464855356 25.664259448185618 24.25046918340639 36-37 24.581903145979542 25.43133275299897 25.662971396160383 24.32379270486111 38-39 24.42244755835906 25.615468082220932 25.623505115314764 24.338579244105237 40-41 24.51318430401725 25.462710720724186 25.680287099764058 24.343817875494505 42-43 24.36976644751455 25.422987650481986 25.58363133579139 24.623614566212073 44-45 24.253735797887803 25.47100219026881 25.743612780242103 24.531649231601286 46-47 24.37392350156415 25.48019742606517 25.643858503546408 24.502020568824275 48-49 24.19759523589394 25.58795446790423 25.622701301888767 24.591748994313072 50-51 24.20474338850111 25.63912035096233 25.69052260672041 24.46561365381615 52-53 24.44713060384311 25.42079706474466 25.614883494699548 24.51718883671268 54-55 23.915456435855223 25.439389438439946 25.896186211281176 24.748967914423655 56-57 24.017785502289126 25.544129201706923 25.73804559374315 24.700039702260806 58-59 24.058255715965554 25.397531885709846 25.788393004649407 24.755819393675196 60-61 24.01780659784758 25.4967848118627 25.87272069522804 24.612687895061676 62-63 24.030844267410465 25.46008509385801 25.79989128978492 24.7091793489466 64-65 23.83857743423477 25.363594174272468 25.752065808136255 25.045762583356503 66-67 23.807108403881433 25.49340149803828 25.642585866083245 25.05690423199704 68-69 23.956475547006825 25.375408822937136 25.683982473561045 24.984133156494988 70-71 23.828119628356404 25.27646232676873 25.687601633667224 25.207816411207645 72-73 23.854770269495305 25.44280735118731 25.534632624618474 25.16778975469891 74-75 23.733982433907777 25.57215039742878 25.504240318648364 25.189626850015085 76-77 23.797666855034443 25.308880024195663 25.636422926556325 25.257030194213577 78-79 23.751703557987653 25.342468988645727 25.635237845174537 25.270589608192083 80-81 23.86324207452366 25.477867671346054 25.393290920410067 25.265599333720218 82-83 23.735668587287247 25.460783712056312 25.494953893165214 25.308593807491224 84-85 23.672877869793886 25.44441095878996 25.465465256936042 25.41724591448011 86-87 23.68421418161756 25.54299361553296 25.389590835170072 25.38320136767941 88-89 23.528464291576185 25.389447283401683 25.42594915659373 25.6561392684284 90-91 23.495132871311473 25.37181649938457 25.463480211066 25.669570418237956 92-93 23.532980178547643 25.25357162647625 25.5291384640725 25.68430973090361 94-95 23.429828830762318 25.09483565937402 25.608223986237828 25.86711152362583 96-97 23.386681071541666 24.9892234153631 25.610329528175097 26.01376598492014 98-99 23.21381623969233 25.05386514516313 25.54192042255926 26.190398192585278 100-101 23.182919821102864 25.0161851379901 25.556721551774398 26.24417348913264 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 23.0 2 48.0 3 86.5 4 89.5 5 92.0 6 161.5 7 300.5 8 447.0 9 517.5 10 426.5 11 333.0 12 356.5 13 372.5 14 408.0 15 466.0 16 499.0 17 564.0 18 625.0 19 675.5 20 741.0 21 880.0 22 1072.0 23 1271.0 24 1553.0 25 1979.5 26 2589.5 27 3495.0 28 4775.0 29 6689.5 30 9910.0 31 14507.0 32 21703.0 33 27709.0 34 32459.0 35 39558.0 36 49308.5 37 59138.5 38 68040.5 39 77639.0 40 86707.5 41 95656.5 42 104296.0 43 113935.0 44 123718.5 45 133958.5 46 143175.0 47 150806.0 48 158577.0 49 162807.0 50 164335.5 51 166105.0 52 167670.5 53 169409.0 54 167860.5 55 159481.5 56 147461.0 57 133804.5 58 120441.0 59 106206.0 60 89832.0 61 74720.0 62 60741.0 63 46142.0 64 33114.5 65 23676.0 66 17376.0 67 13390.5 68 10082.0 69 7424.5 70 5474.0 71 3816.0 72 2614.5 73 1910.0 74 1424.5 75 945.0 76 596.5 77 351.0 78 176.0 79 98.0 80 69.0 81 50.0 82 33.5 83 22.0 84 15.5 85 12.5 86 10.5 87 7.0 88 7.0 89 5.5 90 3.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16093497194395676 2 3.0537945340409253E-4 3 0.009439001287035587 4 0.006551777363942348 5 0.023458694375132563 6 0.0020266090998635232 7 0.0 8 0.0 9 2.776176849128114E-5 10-11 0.048125025679635856 12-13 2.776176849128114E-4 14-15 0.004511287379833185 16-17 0.0 18-19 0.0015685399197573845 20-21 3.1926033764973307E-4 22-23 0.0 24-25 5.413544855799822E-4 26-27 0.0026234871224260674 28-29 0.00512204628664137 30-31 0.015491066818134875 32-33 0.010618876447915036 34-35 0.009425120402789946 36-37 0.003595149019620907 38-39 1.388088424564057E-5 40-41 0.0034008166401819397 42-43 0.00877271884324484 44-45 0.006524015595451068 46-47 0.0033314122189537364 48-49 0.008578386463805873 50-51 0.002609606238180427 52-53 0.0020127282156178826 54-55 0.0040532181997270465 56-57 0.007384630418680783 58-59 0.015019116753783096 60-61 0.007356868650189501 62-63 0.021057301400636743 64-65 0.03961604363705819 66-67 0.060187514089097505 68-69 0.049998945052797325 70-71 0.06786364307693675 72-73 0.033744429601152225 74-75 0.02749803169061397 76-77 0.2232879039753742 78-79 0.08303544955742188 80-81 0.06626734138868809 82-83 0.02728981842692936 84-85 0.05166465116227419 86-87 0.06668376791605729 88-89 0.29092945290438066 90-91 0.2967039007505672 92-93 0.05165077027802856 94-95 0.008856004148718684 96-97 0.014366715194237989 98-99 6.940442122820285E-4 100-101 1.6657061094768684E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3602076.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.40245748587698 #Duplication Level Percentage of deduplicated Percentage of total 1 75.99722776241235 41.34435952389147 2 12.471036622867501 13.56910079360728 3 4.488182954368141 7.325045470915516 4 2.10245683080887 4.575152734158848 5 1.2052197837695564 3.278345902383057 6 0.7715659246180514 2.518504944695094 7 0.550900887318743 2.097925347090287 8 0.37767349293829644 1.6437092914494664 9 0.29848634807396807 1.4614551775087852 >10 1.621543898299618 15.864000983214355 >50 0.08780516164399824 3.2456390342507127 >100 0.026363757744119882 2.2486839522012585 >500 8.707259198624802E-4 0.32991553758885145 >1k 6.658492169126172E-4 0.4981613070449499 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.552353698256228E-5 0.0 3 0.0 0.0 0.0 5.552353698256228E-5 0.0 4 0.0 0.0 0.0 5.552353698256228E-5 0.0 5 0.0 0.0 0.0 5.552353698256228E-5 0.0 6 0.0 0.0 0.0 5.552353698256228E-5 2.776176849128114E-5 7 0.0 0.0 0.0 5.552353698256228E-5 2.776176849128114E-5 8 0.0 0.0 0.0 5.552353698256228E-5 2.776176849128114E-5 9 0.0 0.0 0.0 5.552353698256228E-5 5.552353698256228E-5 10-11 0.0 0.0 0.0 5.552353698256228E-5 5.552353698256228E-5 12-13 0.0 0.0 0.0 8.328530547384342E-5 1.6657061094768684E-4 14-15 0.0 0.0 0.0 8.328530547384342E-5 3.3314122189537367E-4 16-17 0.0 0.0 0.0 8.328530547384342E-5 4.4418829586049825E-4 18-19 0.0 0.0 0.0 8.328530547384342E-5 4.4418829586049825E-4 20-21 0.0 0.0 0.0 1.388088424564057E-4 4.997118328430605E-4 22-23 2.776176849128114E-5 0.0 0.0 2.637368006671708E-4 5.135927170887011E-4 24-25 2.776176849128114E-5 0.0 0.0 3.8866475887793596E-4 5.413544855799822E-4 26-27 2.776176849128114E-5 0.0 0.0 8.189721704927936E-4 6.107589068081851E-4 28-29 2.776176849128114E-5 0.0 0.0 0.005829971383169039 6.107589068081851E-4 30-31 2.776176849128114E-5 0.0 0.0 0.02536037551678532 6.385206752994661E-4 32-33 2.776176849128114E-5 2.776176849128114E-5 0.0 0.05810538145225142 7.218059807733096E-4 34-35 2.776176849128114E-5 2.776176849128114E-5 0.0 0.10330154055605711 7.495677492645907E-4 36-37 5.552353698256228E-5 2.776176849128114E-5 0.0 0.17800845956609465 7.495677492645907E-4 38-39 8.328530547384342E-5 2.776176849128114E-5 0.0 0.3004656203811358 7.634486335102314E-4 40-41 8.328530547384342E-5 2.776176849128114E-5 0.0 0.43423570185637395 8.05091286247153E-4 42-43 8.328530547384342E-5 2.776176849128114E-5 0.0 0.5734332090716576 8.189721704927936E-4 44-45 8.328530547384342E-5 2.776176849128114E-5 0.0 0.7414751937493823 8.74495707475356E-4 46-47 8.328530547384342E-5 2.776176849128114E-5 0.0 0.9408185724010265 9.439001287035587E-4 48-49 8.328530547384342E-5 2.776176849128114E-5 0.0 1.1501006641725493 9.716618971948399E-4 50-51 8.328530547384342E-5 2.776176849128114E-5 0.0 1.3744712771190835 0.0010133045499317616 52-53 8.328530547384342E-5 2.776176849128114E-5 0.0 1.5967181147760348 0.0012076369293707295 54-55 8.328530547384342E-5 2.776176849128114E-5 0.0 1.8503357508281335 0.0014019693088096975 56-57 8.328530547384342E-5 2.776176849128114E-5 0.0 2.1409459433948648 0.0014436119615466193 58-59 8.328530547384342E-5 5.552353698256228E-5 0.0 2.4489905265741196 0.0014436119615466193 60-61 8.328530547384342E-5 5.552353698256228E-5 0.0 2.7719570603174395 0.0014436119615466193 62-63 8.328530547384342E-5 5.552353698256228E-5 0.0 3.1031271966499316 0.0014436119615466193 64-65 1.1104707396512455E-4 5.552353698256228E-5 0.0 3.4524118869229854 0.0014436119615466193 66-67 1.5268972670204626E-4 5.552353698256228E-5 0.0 3.8609957146934155 0.0014852546142835408 68-69 1.6657061094768684E-4 5.552353698256228E-5 0.0 4.303726517708122 0.0014991354985291814 70-71 1.6657061094768684E-4 5.552353698256228E-5 0.0 4.763378118618263 0.0015268972670204627 72-73 1.6657061094768684E-4 5.552353698256228E-5 0.0 5.24113039258472 0.0016240634567399465 74-75 1.6657061094768684E-4 5.552353698256228E-5 0.0 5.725323396841155 0.001637944340985587 76-77 1.6657061094768684E-4 5.552353698256228E-5 0.0 6.266552954462926 0.0016657061094768684 78-79 1.6657061094768684E-4 5.552353698256228E-5 0.0 6.866415367138284 0.0016657061094768684 80-81 1.6657061094768684E-4 5.552353698256228E-5 0.0 7.488681526986104 0.001679586993722509 82-83 1.6657061094768684E-4 5.552353698256228E-5 0.0 8.138390194987558 0.001776753183441993 84-85 1.6657061094768684E-4 5.552353698256228E-5 0.0 8.800147470514226 0.001776753183441993 86-87 1.6657061094768684E-4 5.552353698256228E-5 0.0 9.499952249758195 0.0018183958361789147 88-89 1.6657061094768684E-4 5.552353698256228E-5 0.0 10.26023604166042 0.0018322767204245552 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2215 0.0 40.98369 1 GTATCAA 3750 0.0 40.5574 1 TCAACGC 4415 0.0 33.540672 4 CAACGCA 4615 0.0 32.112095 5 GTACATG 8795 0.0 31.181095 1 AACGCAG 5010 0.0 29.858917 6 ATCAACG 5000 0.0 29.712576 3 TACATGG 9275 0.0 29.067415 2 TATCAAC 5150 0.0 28.939724 2 ACATGGG 9755 0.0 26.809595 3 CATGGGG 8235 0.0 25.128744 4 ACGCAGA 6130 0.0 23.860495 7 CGCAGAG 6610 0.0 21.984123 8 GAGTACA 6650 0.0 20.297758 1 ATGGGGG 4595 0.0 20.157415 5 AGTACAT 7010 0.0 18.010908 2 TAAGGTG 1750 0.0 17.913961 5 AGAGTAC 6095 0.0 17.296906 10-11 GCAGAGT 7985 0.0 17.246948 9 TACCGTA 255 5.5253768E-6 16.760675 7 >>END_MODULE