##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921666_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2950875 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.385733384165714 33.0 31.0 34.0 29.0 34.0 2 31.51009344685898 34.0 31.0 34.0 28.0 34.0 3 31.592038293726436 34.0 31.0 34.0 28.0 34.0 4 35.06323446435379 37.0 35.0 37.0 32.0 37.0 5 34.810920489685266 37.0 35.0 37.0 32.0 37.0 6 34.79168416147753 37.0 35.0 37.0 32.0 37.0 7 34.67266217647308 37.0 35.0 37.0 32.0 37.0 8 34.61912449697124 37.0 35.0 37.0 32.0 37.0 9 36.21490405388232 39.0 37.0 39.0 32.0 39.0 10-11 36.1113852670818 39.0 37.0 39.0 32.0 39.0 12-13 36.02489041386029 39.0 37.0 39.0 31.0 39.0 14-15 37.286055322573816 40.0 38.0 41.0 31.0 41.0 16-17 37.25142339136697 40.0 38.0 41.0 31.0 41.0 18-19 37.20010285084932 40.0 38.0 41.0 31.0 41.0 20-21 37.13724319057907 40.0 38.0 41.0 31.0 41.0 22-23 37.05180073706951 40.0 38.0 41.0 31.0 41.0 24-25 36.967951878680054 40.0 37.0 41.0 30.5 41.0 26-27 36.84319735671623 40.0 37.0 41.0 30.0 41.0 28-29 36.7245466175287 40.0 37.0 41.0 30.0 41.0 30-31 36.576753844198755 40.0 37.0 41.0 30.0 41.0 32-33 36.53484542720379 40.0 37.0 41.0 30.0 41.0 34-35 36.6771691447452 40.0 37.0 41.0 30.0 41.0 36-37 36.676123183801415 40.0 37.0 41.0 30.0 41.0 38-39 36.57342093446859 40.0 37.0 41.0 30.0 41.0 40-41 36.49060295675012 40.0 37.0 41.0 30.0 41.0 42-43 36.37172736900072 40.0 37.0 41.0 29.5 41.0 44-45 36.250634811708395 40.0 36.0 41.0 29.0 41.0 46-47 36.101403143135514 40.0 36.0 41.0 28.5 41.0 48-49 35.959708899902566 40.0 36.0 41.0 28.0 41.0 50-51 35.79500232981743 40.0 35.0 41.0 28.0 41.0 52-53 35.619313932308216 39.0 35.0 41.0 27.5 41.0 54-55 35.406751387300375 39.0 35.0 41.0 27.0 41.0 56-57 35.17688194179692 39.0 35.0 41.0 26.5 41.0 58-59 34.92932723344771 38.5 35.0 40.5 26.0 41.0 60-61 34.64884212309909 38.0 34.5 40.0 26.0 41.0 62-63 34.33841504638455 37.5 34.0 40.0 26.0 41.0 64-65 33.99616961070869 37.0 34.0 40.0 25.5 41.0 66-67 33.64000982759351 36.0 34.0 39.0 24.5 41.0 68-69 33.277725589867416 36.0 34.0 39.0 23.5 41.0 70-71 32.88582691574533 35.0 33.0 38.5 23.0 40.0 72-73 32.52868013724743 35.0 33.0 37.5 22.0 39.5 74-75 32.13199406955564 35.0 33.0 37.0 21.5 39.0 76-77 29.45347413902656 33.0 29.0 34.5 16.5 36.5 78-79 31.023300715889356 34.5 31.5 36.0 18.5 37.0 80-81 31.207476595924938 35.0 32.0 35.5 20.0 37.0 82-83 31.040593552759773 35.0 32.0 35.0 18.5 37.0 84-85 30.84761909603084 35.0 32.0 35.0 18.0 36.0 86-87 30.645020544753674 35.0 32.0 35.0 16.0 36.0 88-89 30.38379955098064 35.0 32.0 35.0 10.0 36.0 90-91 30.192870589232008 34.5 32.0 35.0 4.5 35.0 92-93 30.03941068327191 34.0 31.0 35.0 2.0 35.0 94-95 29.93771457618503 34.0 31.0 35.0 2.0 35.0 96-97 29.741412631846487 34.0 31.0 35.0 2.0 35.0 98-99 29.542367772270936 34.0 31.0 35.0 2.0 35.0 100-101 28.432432752996995 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 54917.0 3 18929.0 4 10314.0 5 7225.0 6 6531.0 7 6370.0 8 6663.0 9 7182.0 10 7683.0 11 8377.0 12 8910.0 13 9529.0 14 10031.0 15 10703.0 16 11247.0 17 11771.0 18 11414.0 19 10517.0 20 10271.0 21 10120.0 22 10992.0 23 12501.0 24 14801.0 25 17829.0 26 21036.0 27 25856.0 28 30902.0 29 37706.0 30 45749.0 31 57567.0 32 73262.0 33 95820.0 34 137416.0 35 208222.0 36 373065.0 37 724166.0 38 735645.0 39 89633.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38813620128862 18.130224213298433 11.19786902500359 27.28377056040936 2 16.163379724203182 19.984018261745355 35.7301987076345 28.12240330641696 3 19.216143614479392 22.629082013417086 28.190557337134635 29.964217034968883 4 13.057781498194487 15.002177460487989 34.18989149977039 37.75014954154713 5 13.987028997813308 37.054640846691264 34.55260618300482 14.4057239724906 6 36.11639588372883 34.52243541299961 15.480309581113898 13.88085912215766 7 30.667253159572383 30.69534653123109 19.53563588279269 19.10176442640384 8 28.27334265260304 34.557377049180324 18.442089210827298 18.727191087389333 9 26.552244030834267 14.578262093963378 17.964887001236583 40.90460687396577 10-11 26.70150278434663 24.781447860248683 26.996296013764926 21.520753341639757 12-13 26.615507708240422 21.718440133547144 27.18659391067306 24.47945824753937 14-15 23.20003741449568 23.657687187704187 23.850131221854404 29.292144175945733 16-17 24.19500995467446 27.12736052865675 24.74291523700597 23.93471427966281 18-19 24.196974965111654 26.340380135568086 25.943002031284628 23.519642868035632 20-21 24.291974676582175 25.531017933552036 26.269225079896053 23.907782309969736 22-23 24.145634769348074 25.43759054517728 25.976498496208748 24.440276189265898 24-25 23.9398433203055 25.692484329150034 26.09446869913561 24.27320365140886 26-27 23.94102052027441 25.880603458939287 25.940333246463908 24.238042774322395 28-29 24.051074772761048 26.058958682086093 25.79869783154367 24.09126871360919 30-31 24.162498279883756 25.844721124247638 25.745869517913274 24.24691107795533 32-33 23.878881914425072 25.905775089895005 25.741838191196788 24.473504804483134 34-35 24.205276842130413 25.924553938109955 25.866243200681634 24.003926019077998 36-37 24.267685792042776 25.70390632532473 25.923391743600092 24.105016139032397 38-39 24.095819036726397 25.867429152370057 25.92122675477613 24.11552505612742 40-41 24.24821063048164 25.709952690154402 25.983560167550056 24.058276511813904 42-43 24.037354208508184 25.704886230613383 25.87432531083319 24.383434250045244 44-45 24.039619838522707 25.789801617823066 26.023272156189726 24.147306387464507 46-47 24.229819342693094 25.781593000429552 25.82546316575179 24.16312449112557 48-49 24.009232684353325 25.941006325991843 25.808813075422343 24.240947914232493 50-51 24.064668860319106 25.988172983711294 25.872305570057343 24.074852585912264 52-53 24.31168192120417 25.74533620530728 25.83556548425927 24.107416389229282 54-55 23.70759786021591 25.769266613911984 26.216404898390756 24.30673062748135 56-57 23.87480701354832 25.897455840819365 25.946529599050788 24.28120754658152 58-59 23.86041534836002 25.744982356862828 26.060596406161928 24.33400588861522 60-61 23.785222666885147 25.91110947683318 26.13029664912209 24.173371207159583 62-63 23.819944225112934 25.85443110377841 26.06265056973937 24.262974101369288 64-65 23.5985619435087 25.74661178831366 26.130772690080654 24.52405357809698 66-67 23.648697449627836 25.882735710127058 25.987920378393536 24.480646461851567 68-69 23.848834441693604 25.72567252615954 26.033599353360444 24.39189367878641 70-71 23.644819880157485 25.620373227710953 26.045722598825993 24.689084293305573 72-73 23.665976132677443 25.820276071217545 25.941738186258405 24.572009609846603 74-75 23.56172806864113 25.8822169522872 25.97594360536774 24.58011137370393 76-77 23.657263378119524 25.58270727764268 26.06332106128327 24.69670828295453 78-79 23.54109397390132 25.67216395194044 26.122743498647583 24.663998575510654 80-81 23.67123252366886 25.797775929264876 25.844979699326903 24.686011847739355 82-83 23.59067577496371 25.80632750378594 25.937782568644845 24.6652141526055 84-85 23.50185430939605 25.81416354676596 25.917779738287745 24.766202405550246 86-87 23.483281901726066 25.9348570653464 25.85674319237682 24.725117840550716 88-89 23.33925242078441 25.80253088147499 25.86483169857417 24.993384999166434 90-91 23.28466732754136 25.817229115444775 25.932590441291058 24.965513115722807 92-93 23.397408566536974 25.633274750230683 26.08208223345211 24.887234449780234 94-95 23.30652499936453 25.416418833617175 26.14915736763173 25.12789879938656 96-97 23.192388253955343 25.301700763275985 26.199804097016038 25.306106885752634 98-99 23.06563428651599 25.31962813439242 26.170162437886564 25.44457514120503 100-101 23.022790401269862 25.355696007566586 26.208783546680053 25.4127300444835 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 21.5 2 33.0 3 61.5 4 61.0 5 49.0 6 112.0 7 232.5 8 335.5 9 377.0 10 313.5 11 235.0 12 243.0 13 282.5 14 321.0 15 349.0 16 376.5 17 427.0 18 468.0 19 523.5 20 626.5 21 776.0 22 969.0 23 1189.5 24 1459.0 25 1943.5 26 2618.5 27 3580.0 28 5093.0 29 7338.5 30 10684.5 31 15284.5 32 23242.0 33 28850.5 34 31652.5 35 37393.0 36 45744.5 37 54131.0 38 61877.5 39 69615.5 40 76373.5 41 83137.0 42 89767.5 43 96783.5 44 103958.5 45 112553.5 46 118922.5 47 122843.5 48 127177.5 49 130146.0 50 131284.5 51 131737.5 52 132342.0 53 132006.5 54 129976.0 55 123565.5 56 113792.5 57 103268.5 58 94046.0 59 83089.5 60 69056.5 61 56886.5 62 46499.0 63 35679.5 64 25518.0 65 18339.0 66 13586.0 67 10510.0 68 8073.5 69 5995.5 70 4419.0 71 3097.0 72 2167.0 73 1647.5 74 1283.0 75 912.0 76 621.5 77 376.5 78 200.0 79 113.0 80 74.5 81 49.5 82 25.5 83 16.0 84 9.5 85 9.0 86 9.5 87 4.5 88 3.5 89 4.0 90 2.5 91 2.5 92 2.5 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15649595458974033 2 2.3721777438895242E-4 3 0.010471470326598044 4 0.006438768161985852 5 0.02561951963400686 6 0.001660524420722667 7 3.388825348413606E-5 8 0.0 9 6.777650696827211E-5 10-11 0.045749142203583684 12-13 2.3721777438895242E-4 14-15 0.004981573262168 16-17 0.0 18-19 0.00111831236497649 20-21 3.2193840809929255E-4 22-23 0.0 24-25 4.7443554877790484E-4 26-27 0.0029143897996357013 28-29 0.0061507180073706955 30-31 0.01670690896767908 32-33 0.011843944592705553 34-35 0.010285084932435294 36-37 0.003710763756512899 38-39 0.0 40-41 0.003897149150675647 42-43 0.008709281145422968 44-45 0.0061507180073706955 46-47 0.004151311051806668 48-49 0.009166772567458806 50-51 0.0029991104333460415 52-53 0.0019994069555640277 54-55 0.003727707883254967 56-57 0.007269030372347185 58-59 0.01477527851908332 60-61 0.006794594823569281 62-63 0.0210954377938747 64-65 0.0406489600542212 66-67 0.06018553818782564 68-69 0.04991739738213241 70-71 0.0679459482356928 72-73 0.033346041428389886 74-75 0.027347820561697798 76-77 0.22078197144914644 78-79 0.08302622103613336 80-81 0.06635320032193841 82-83 0.027703647223281228 84-85 0.05181513957724403 86-87 0.06692930063116873 88-89 0.29477697293175753 90-91 0.2987080103359173 92-93 0.05095098911339857 94-95 0.010166476045240817 96-97 0.014741390265599185 98-99 8.133180836192654E-4 100-101 1.8638539416274835E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2950875.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.21082827572969 #Duplication Level Percentage of deduplicated Percentage of total 1 77.52824365968326 45.129832781927504 2 12.365354630846992 14.395950699694662 3 4.068425649321559 7.104792804756939 4 1.956293731489895 4.555099138425788 5 1.025487341093459 2.9847233755662996 6 0.6501154136547136 2.27062540221957 7 0.4465335074207775 1.8195159723881107 8 0.32394880522278513 1.508586261676108 9 0.24380577728005318 1.277292261049198 >10 1.3042542789350993 13.397759780794036 >50 0.0666161052818271 2.630148257594999 >100 0.019286255853278252 1.8591725705606539 >500 8.758092410890095E-4 0.37967682999587804 >1k 7.590346751692612E-4 0.6868238633503199 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3888253484136064E-5 2 0.0 0.0 0.0 3.3888253484136064E-5 3.3888253484136064E-5 3 0.0 0.0 0.0 3.3888253484136064E-5 3.3888253484136064E-5 4 0.0 0.0 0.0 6.777650696827213E-5 3.3888253484136064E-5 5 0.0 0.0 0.0 6.777650696827213E-5 3.3888253484136064E-5 6 0.0 0.0 0.0 6.777650696827213E-5 3.3888253484136064E-5 7 0.0 0.0 0.0 6.777650696827213E-5 3.3888253484136064E-5 8 0.0 0.0 0.0 6.777650696827213E-5 3.3888253484136064E-5 9 0.0 0.0 0.0 6.777650696827213E-5 1.0166476045240818E-4 10-11 0.0 0.0 0.0 1.0166476045240818E-4 1.0166476045240818E-4 12-13 0.0 0.0 0.0 1.0166476045240818E-4 2.541619011310205E-4 14-15 0.0 0.0 0.0 1.0166476045240818E-4 4.0665904180963277E-4 16-17 0.0 0.0 0.0 1.0166476045240818E-4 4.7443554877790484E-4 18-19 3.3888253484136064E-5 0.0 0.0 1.3555301393654426E-4 5.42212055746177E-4 20-21 3.3888253484136064E-5 0.0 0.0 2.0332952090481636E-4 5.761003092303131E-4 22-23 3.3888253484136064E-5 0.0 0.0 2.0332952090481636E-4 6.947091964247893E-4 24-25 3.3888253484136064E-5 0.0 0.0 3.3888253484136064E-4 8.133180836192654E-4 26-27 3.3888253484136064E-5 0.0 0.0 4.744355487779049E-4 8.810945905875376E-4 28-29 3.3888253484136064E-5 0.0 0.0 0.0036599313762866945 8.810945905875376E-4 30-31 3.3888253484136064E-5 0.0 0.0 0.015198881687635023 8.980387173296055E-4 32-33 3.3888253484136064E-5 0.0 0.0 0.03536239251069598 9.827593510399457E-4 34-35 3.3888253484136064E-5 0.0 0.0 0.06032109120176219 9.827593510399457E-4 36-37 3.3888253484136064E-5 0.0 0.0 0.10205447536747575 9.827593510399457E-4 38-39 3.3888253484136064E-5 0.0 0.0 0.17774388952429365 0.001016647604524082 40-41 3.3888253484136064E-5 0.0 1.6944126742068032E-5 0.2656500190621426 0.0010505358580082179 42-43 3.3888253484136064E-5 0.0 3.3888253484136064E-5 0.353420595586055 0.0010505358580082179 44-45 3.3888253484136064E-5 0.0 3.3888253484136064E-5 0.4605921972296353 0.0010505358580082179 46-47 3.3888253484136064E-5 0.0 3.3888253484136064E-5 0.583081289448045 0.001084424111492354 48-49 3.3888253484136064E-5 0.0 3.3888253484136064E-5 0.7183631973567162 0.00111831236497649 50-51 3.3888253484136064E-5 0.0 3.3888253484136064E-5 0.872470030075825 0.0011860888719447621 52-53 3.3888253484136064E-5 0.0 3.3888253484136064E-5 1.0282373872156563 0.0012199771254288983 54-55 3.3888253484136064E-5 0.0 3.3888253484136064E-5 1.1966620070318128 0.0012538653789130345 56-57 3.3888253484136064E-5 0.0 3.3888253484136064E-5 1.3958910492650485 0.0013385860126233745 58-59 3.3888253484136064E-5 0.0 3.3888253484136064E-5 1.6100648112847884 0.0013894183928495785 60-61 3.3888253484136064E-5 0.0 3.3888253484136064E-5 1.8405388232303976 0.0013894183928495785 62-63 3.3888253484136064E-5 0.0 3.3888253484136064E-5 2.077214385563604 0.0013894183928495785 64-65 3.3888253484136064E-5 0.0 3.3888253484136064E-5 2.3214300842970306 0.0013894183928495785 66-67 3.3888253484136064E-5 0.0 3.3888253484136064E-5 2.604549498030245 0.0014063625195916466 68-69 3.3888253484136064E-5 0.0 3.3888253484136064E-5 2.925793196933113 0.0014233066463337147 70-71 3.3888253484136064E-5 0.0 3.3888253484136064E-5 3.2681492777565975 0.0014910831533019866 72-73 3.3888253484136064E-5 0.0 3.3888253484136064E-5 3.625856737408396 0.001677468547464735 74-75 3.3888253484136064E-5 0.0 3.3888253484136064E-5 3.979243444740967 0.001711356800948871 76-77 3.3888253484136064E-5 0.0 3.3888253484136064E-5 4.367450332528487 0.0017621891811750753 78-79 3.3888253484136064E-5 0.0 3.3888253484136064E-5 4.807590968780446 0.0017960774346592113 80-81 3.3888253484136064E-5 0.0 3.3888253484136064E-5 5.282873723895454 0.0018807980683695513 82-83 3.3888253484136064E-5 0.0 3.3888253484136064E-5 5.78074299995764 0.0019994069555640277 84-85 3.3888253484136064E-5 0.0 3.3888253484136064E-5 6.278019231583853 0.002033295209048164 86-87 3.3888253484136064E-5 0.0 3.3888253484136064E-5 6.792798746134621 0.0021180158427585036 88-89 3.3888253484136064E-5 0.0 3.3888253484136064E-5 7.366831871902402 0.002168848222984708 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2755 0.0 37.608128 1 GGTATCA 1645 0.0 37.27096 1 TCAACGC 2930 0.0 33.8503 4 CAACGCA 3075 0.0 32.43702 5 ATCAACG 3265 0.0 30.52249 3 GTACATG 6735 0.0 30.062065 1 AACGCAG 3425 0.0 29.11735 6 TATCAAC 3440 0.0 28.693844 2 TACATGG 6900 0.0 27.854143 2 ACATGGG 7355 0.0 25.808405 3 CATGGGG 6105 0.0 23.086315 4 GAGTACA 4760 0.0 22.965065 1 ACGCAGA 4465 0.0 21.90945 7 CGTTATA 110 0.0028942255 21.570547 2 TATACCG 250 9.511496E-9 20.89871 5 CGCAGAG 4695 0.0 20.633852 8 GTATAGG 765 0.0 19.25959 1 AGTACAT 5330 0.0 19.231379 2 CCCTATA 470 0.0 19.18402 2 ATGGGGG 3440 0.0 18.36369 5 >>END_MODULE