##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921665_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2777851 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.577907166367094 31.0 31.0 34.0 27.0 34.0 2 30.63623930873182 33.0 31.0 34.0 27.0 34.0 3 30.701251435012175 33.0 31.0 34.0 27.0 34.0 4 34.16877327113657 37.0 35.0 37.0 30.0 37.0 5 34.166305536186066 37.0 35.0 37.0 30.0 37.0 6 34.20958827525306 37.0 35.0 37.0 30.0 37.0 7 34.12456103657107 37.0 35.0 37.0 30.0 37.0 8 34.09501193548538 37.0 35.0 37.0 30.0 37.0 9 35.669995978905995 39.0 37.0 39.0 30.0 39.0 10-11 35.57437745941017 39.0 37.0 39.0 30.0 39.0 12-13 35.465978736800494 39.0 37.0 39.0 30.0 39.0 14-15 36.62536723531967 40.0 37.0 41.0 30.0 41.0 16-17 36.56165971464992 40.0 37.0 41.0 30.0 41.0 18-19 36.525208515503536 40.0 37.0 41.0 29.0 41.0 20-21 36.447535702958874 40.0 37.0 41.0 29.0 41.0 22-23 36.34704057201053 40.0 37.0 41.0 28.5 41.0 24-25 36.23106962900458 40.0 36.5 41.0 28.0 41.0 26-27 36.08267002081825 40.0 36.0 41.0 27.0 41.0 28-29 35.94554999530213 40.0 36.0 41.0 27.0 41.0 30-31 35.79853725055807 40.0 36.0 41.0 27.0 41.0 32-33 35.62500922475684 40.0 35.5 41.0 26.0 41.0 34-35 35.4510403905753 39.0 35.0 41.0 25.5 41.0 36-37 35.41748243516301 39.0 35.0 41.0 25.5 41.0 38-39 35.60585016978953 40.0 35.5 41.0 26.0 41.0 40-41 35.66295528449871 40.0 35.5 41.0 26.0 41.0 42-43 35.5040273938379 40.0 35.0 41.0 25.0 41.0 44-45 35.37868157795361 40.0 35.0 41.0 24.5 41.0 46-47 35.219887063776994 40.0 35.0 41.0 24.0 41.0 48-49 35.05823278498379 39.5 35.0 41.0 24.0 41.0 50-51 33.34317265396884 37.0 32.5 39.5 20.5 40.0 52-53 33.473219585931716 37.5 33.5 39.5 21.0 40.0 54-55 34.38534500230574 39.0 34.0 40.5 22.0 41.0 56-57 34.39556963278448 39.0 34.0 41.0 22.0 41.0 58-59 34.20177864111502 38.0 34.0 41.0 22.0 41.0 60-61 33.94514662593494 38.0 34.0 40.0 20.5 41.0 62-63 33.642046315659115 37.0 34.0 40.0 20.0 41.0 64-65 33.34688163620007 37.0 34.0 40.0 18.5 41.0 66-67 32.99531850340425 36.0 33.0 39.0 17.5 41.0 68-69 32.6231064949128 36.0 33.0 39.0 14.0 41.0 70-71 32.20134431256392 35.0 33.0 39.0 10.0 40.5 72-73 31.827532506243138 35.0 32.5 37.5 7.5 40.0 74-75 31.416901950464585 35.0 32.0 37.0 4.0 39.0 76-77 31.036775730591742 35.0 32.0 36.5 2.0 39.0 78-79 30.687180305927136 35.0 32.0 36.0 2.0 38.0 80-81 30.36327542405982 35.0 31.0 35.5 2.0 37.0 82-83 30.048639397865472 35.0 31.0 35.0 2.0 37.0 84-85 29.778617895632273 35.0 31.0 35.0 2.0 36.0 86-87 29.536098768436464 35.0 31.0 35.0 2.0 36.0 88-89 29.307492554496264 35.0 31.0 35.0 2.0 36.0 90-91 29.06804270639426 34.5 30.0 35.0 2.0 35.0 92-93 28.85896363771851 34.0 30.0 35.0 2.0 35.0 94-95 28.607136595879332 34.0 30.0 35.0 2.0 35.0 96-97 28.346297371601285 34.0 30.0 35.0 2.0 35.0 98-99 28.05196013033096 34.0 29.0 35.0 2.0 35.0 100-101 26.957055472017757 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83496.0 3 15218.0 4 10554.0 5 8279.0 6 7569.0 7 7742.0 8 8322.0 9 8717.0 10 9511.0 11 10244.0 12 10041.0 13 10283.0 14 11045.0 15 11713.0 16 11484.0 17 11989.0 18 11805.0 19 11164.0 20 11350.0 21 12206.0 22 13370.0 23 15739.0 24 18705.0 25 21986.0 26 25726.0 27 30400.0 28 35801.0 29 41749.0 30 50234.0 31 60850.0 32 75488.0 33 98281.0 34 137375.0 35 200832.0 36 334655.0 37 605526.0 38 625609.0 39 102784.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.94424678227683 17.575320331572982 12.503430773298103 24.97700211285209 2 16.345855246140356 19.4864567504415 38.3763951964389 25.791292806979243 3 19.201129715553762 23.664983140724516 29.070650451021645 28.063236692700077 4 13.758925033322525 15.413199322742175 35.88623509492417 34.94164054901113 5 14.703102294823553 36.89923251325433 33.85118696403626 14.546478227885856 6 34.097667035458365 34.6791530199936 16.91799827113139 14.305181673416648 7 29.36567314643862 31.329875022682565 20.954403009363936 18.35004882151488 8 27.024281840593687 34.028422128631576 20.043977283324384 18.903318747450353 9 27.202340964942408 15.068737763972381 19.126616739713818 38.602304531371395 10-11 26.011928850305388 24.790906681913167 27.71074230198152 21.48642216579993 12-13 26.290429149855882 22.338188882107563 27.441051981557194 23.930329986479357 14-15 23.73994933273455 23.897255904263393 24.507251029848454 27.855543733153603 16-17 24.034969553687542 26.793925249041134 25.45234662831013 23.7187585689612 18-19 24.01592336851898 26.325852287967145 26.554218767382658 23.10400557613122 20-21 24.468649338809232 25.59850313006119 26.3918384365609 23.54100909456868 22-23 24.438404361823956 25.311255320834626 26.11944598497562 24.1308943323658 24-25 24.253485779682627 25.481892599615506 26.078459369737256 24.186162250964614 26-27 24.014490559298356 25.68714845027818 26.112100196722913 24.186260793700544 28-29 24.09068423432635 25.897470700565396 25.962672563516914 24.049172501591343 30-31 24.45865376306921 25.651552464068665 25.73342406175293 24.15636971110919 32-33 24.123587225091008 25.743168295230305 25.662109136625453 24.471135343053234 34-35 24.499474296131933 25.709790224266115 25.801106633192983 23.98962884640897 36-37 24.557784950432605 25.59866788296205 25.838189035053933 24.005358131551418 38-39 24.377044934053604 25.67107857316816 25.7794397152946 24.172436777483636 40-41 24.51488461179159 25.491874289122922 25.87899461393896 24.11424648514653 42-43 24.383962476886303 25.48966761376449 25.681919451585262 24.444450457763946 44-45 24.132807322076694 25.566780134809168 25.907094388962783 24.393318154151356 46-47 24.31305052944793 25.46556987773036 25.74021800510736 24.481161587714347 48-49 24.13871284319591 25.558076921481348 25.777532555351357 24.525677679971388 50-51 24.107567335543283 25.639538868308374 25.91667237790867 24.336221418239663 52-53 24.37535521157037 25.424788397164548 25.862306242290412 24.337550148974675 54-55 23.883232695393588 25.282682921682408 26.16112687558741 24.672957507336598 56-57 23.93997438811031 25.425770611258407 26.02415092978374 24.610104070847537 58-59 24.088242323666424 25.273723467100783 25.999972942868865 24.638061266363927 60-61 24.061725854042017 25.292205853623518 26.200350710160116 24.445717582174357 62-63 24.046460606349186 25.322054918155196 26.168928049150892 24.46255642634473 64-65 23.809808954395827 25.158723702889933 26.161071484419455 24.870395858294785 66-67 23.9304053543444 25.18541323872438 25.98653045257225 24.897650954358973 68-69 24.01568107477078 25.18575602644148 26.015799023693127 24.782763875094616 70-71 23.846997822972615 24.97334620217645 26.10297671345328 25.076679261397654 72-73 23.85447796861445 25.225363823114062 25.937517471986204 24.98264073628528 74-75 23.865591564628403 25.309451341581042 26.034762866993276 24.790194226797283 76-77 23.885524172307075 24.937758804795923 26.094160085165612 25.082556937731393 78-79 23.848206513485014 24.97922982045835 26.10853956507262 25.064024100984017 80-81 24.02347590443819 25.11107831927995 25.933553968639384 24.93189180764248 82-83 23.962360779965916 25.109692064884232 26.00019879234552 24.927748362804326 84-85 23.883560923545527 25.059124511685017 26.052575043620728 25.00473952114873 86-87 23.81754461929827 25.16410249471154 25.967768561492765 25.05058432449743 88-89 23.772422563196663 24.891771494568143 26.105994570218684 25.22981137201651 90-91 23.862268691625456 24.86976260756594 26.146111605349176 25.121857095459433 92-93 23.94476551086364 24.685683853432067 26.205460378214916 25.164090257489374 94-95 23.85950080428142 24.579890150096446 26.236551108493916 25.324057937128213 96-97 23.917039890691356 24.458278626987852 26.26563134024517 25.359050142075617 98-99 23.712846377600183 24.421058480765513 26.1945565361816 25.6715386054527 100-101 24.018490709629063 24.260441078589846 26.321223124970345 25.399845086810746 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 39.5 2 71.5 3 119.0 4 111.0 5 121.0 6 186.0 7 350.5 8 525.5 9 558.0 10 514.5 11 471.5 12 494.5 13 584.5 14 678.0 15 745.5 16 812.5 17 915.5 18 1012.5 19 1079.5 20 1179.0 21 1275.0 22 1351.0 23 1443.0 24 1549.5 25 1729.5 26 2040.0 27 2486.0 28 3128.0 29 4282.0 30 6332.5 31 9653.0 32 14981.0 33 20715.5 34 26499.5 35 33603.0 36 42684.0 37 51733.5 38 60146.0 39 68008.0 40 74162.0 41 80477.0 42 87326.0 43 94521.5 44 101722.5 45 109396.0 46 114788.0 47 118754.5 48 122818.0 49 124818.0 50 123999.5 51 123201.0 52 122715.0 53 121317.5 54 119179.0 55 113018.0 56 104400.5 57 94408.5 58 85285.5 59 75229.0 60 62394.5 61 51825.0 62 43426.5 63 34077.5 64 25156.5 65 19016.5 66 14628.5 67 11619.5 68 9278.0 69 7302.0 70 5817.5 71 4377.0 72 3249.0 73 2499.0 74 1978.5 75 1555.0 76 1155.5 77 747.5 78 474.5 79 332.0 80 225.5 81 177.0 82 140.5 83 101.5 84 80.0 85 72.0 86 62.5 87 42.5 88 37.0 89 40.0 90 35.5 91 31.5 92 26.0 93 18.0 94 18.0 95 16.0 96 11.5 97 12.0 98 10.5 99 8.5 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054322568057106016 2 0.07477002906203392 3 0.0695141676065419 4 0.07023414862784218 5 0.06397031374252975 6 0.011231703932284344 7 0.01393163276216039 8 0.018287517941027075 9 0.006947816855547688 10-11 0.013787636557900334 12-13 0.022175415456048578 14-15 0.039868949054502924 16-17 0.026981288773227936 18-19 0.01072771721737415 20-21 0.021203441077293203 22-23 0.03711502164802936 24-25 0.03461308759901089 26-27 0.02140143585815078 28-29 0.011627693493999497 30-31 0.01191568590251961 32-33 0.008999762766253482 34-35 0.00527386098102454 36-37 6.119838681052368E-4 38-39 0.0036899027341639277 40-41 0.0011699691596129527 42-43 0.2241300919307767 44-45 0.1948808629404529 46-47 0.20074870826405017 48-49 0.20751652986427277 50-51 0.19947074195124218 52-53 0.20647255738338735 54-55 0.20229666745984576 56-57 0.20523059012164438 58-59 0.21378036474958517 60-61 0.21766826226460673 62-63 0.2035026356705237 64-65 0.20373662950244634 66-67 0.20150468833641544 68-69 0.1967168145447686 70-71 0.18946300575516828 72-73 0.20001072771721737 74-75 0.19889475713420193 76-77 0.19333290374465728 78-79 0.21052245062820144 80-81 0.22168215645835576 82-83 0.22011619773702765 84-85 0.21406835715810532 86-87 0.23357984283534286 88-89 0.22623603641808002 90-91 0.2328958608651076 92-93 0.22888196667135854 94-95 0.2315818955012346 96-97 0.23815172232059964 98-99 0.2316718931288971 100-101 0.2383677166269897 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2777851.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.37153650825121 #Duplication Level Percentage of deduplicated Percentage of total 1 76.45292294125282 43.0976873674535 2 12.450738193042564 14.037344852075531 3 4.389883076833386 7.423933623980021 4 2.1002745897832407 4.735828228612731 5 1.1238084522695495 3.1675404597697097 6 0.7637334295224059 2.583169614293652 7 0.5129968694574888 2.0242895228668987 8 0.36102782179011356 1.628135442922864 9 0.27221766471116676 1.381079522201078 >10 1.4824339971419944 14.782848483978894 >50 0.06853402615739167 2.566424266028308 >100 0.019892348473818707 1.8153463022690657 >500 0.0011524421731157388 0.4465617519655789 >1k 3.8414739098338265E-4 0.3098105615822821 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5999051065013924E-5 0.0 0.0 0.0 7.199810213002785E-5 2 3.5999051065013924E-5 0.0 0.0 0.0 7.199810213002785E-5 3 3.5999051065013924E-5 0.0 0.0 0.0 7.199810213002785E-5 4 3.5999051065013924E-5 0.0 0.0 0.0 7.199810213002785E-5 5 3.5999051065013924E-5 0.0 0.0 0.0 7.199810213002785E-5 6 7.199810213002785E-5 0.0 0.0 0.0 1.0799715319504178E-4 7 7.199810213002785E-5 0.0 0.0 3.5999051065013924E-5 1.0799715319504178E-4 8 7.199810213002785E-5 0.0 0.0 3.5999051065013924E-5 1.0799715319504178E-4 9 7.199810213002785E-5 0.0 0.0 7.199810213002785E-5 1.0799715319504178E-4 10-11 1.0799715319504178E-4 0.0 0.0 7.199810213002785E-5 1.0799715319504178E-4 12-13 1.0799715319504178E-4 0.0 0.0 1.439962042600557E-4 1.439962042600557E-4 14-15 1.2599667872754874E-4 0.0 0.0 1.439962042600557E-4 2.519933574550975E-4 16-17 1.7999525532506964E-4 0.0 0.0 1.439962042600557E-4 3.239914595851253E-4 18-19 2.1599430639008356E-4 0.0 0.0 1.7999525532506964E-4 3.239914595851253E-4 20-21 2.519933574550975E-4 0.0 0.0 1.979947808575766E-4 3.959895617151532E-4 22-23 2.519933574550975E-4 0.0 0.0 2.879924085201114E-4 4.319886127801671E-4 24-25 3.599905106501393E-4 0.0 0.0 4.4998813831267405E-4 4.85987189377688E-4 26-27 4.319886127801671E-4 0.0 0.0 9.89973904287883E-4 5.03986714910195E-4 28-29 4.319886127801671E-4 0.0 0.0 0.0034739084277738436 5.03986714910195E-4 30-31 5.03986714910195E-4 0.0 0.0 0.01429162327281053 5.03986714910195E-4 32-33 5.399857659752089E-4 0.0 0.0 0.0436848484673944 5.03986714910195E-4 34-35 5.399857659752089E-4 0.0 0.0 0.08808967795608907 5.03986714910195E-4 36-37 5.399857659752089E-4 0.0 0.0 0.16289570606918802 5.03986714910195E-4 38-39 5.399857659752089E-4 0.0 0.0 0.28712843129455107 5.399857659752089E-4 40-41 5.399857659752089E-4 0.0 0.0 0.4232588428969012 5.399857659752089E-4 42-43 5.399857659752089E-4 0.0 0.0 0.5692889935421303 5.399857659752089E-4 44-45 5.579852915077159E-4 0.0 0.0 0.7506342132821379 5.759848170402229E-4 46-47 5.759848170402228E-4 0.0 0.0 0.9668085149275465 6.659824447027575E-4 48-49 5.759848170402228E-4 0.0 0.0 1.1928285570392365 7.559800723652924E-4 50-51 5.759848170402228E-4 0.0 0.0 1.4284063472086874 7.559800723652924E-4 52-53 5.759848170402228E-4 0.0 0.0 1.6679800320463554 8.819767510928412E-4 54-55 5.759848170402228E-4 0.0 0.0 1.9437867617809594 9.359753276903622E-4 56-57 5.759848170402228E-4 0.0 0.0 2.2623423646552676 9.71974378755376E-4 58-59 5.759848170402228E-4 0.0 0.0 2.5941996168980985 9.71974378755376E-4 60-61 6.299833936377437E-4 0.0 0.0 2.944722377118139 9.71974378755376E-4 62-63 6.479829191702506E-4 0.0 0.0 3.3099687492237706 0.0010439724808854038 64-65 6.479829191702506E-4 0.0 0.0 3.7037083702473605 0.0010799715319504176 66-67 6.479829191702506E-4 0.0 0.0 4.1576744037027185 0.0011159705830154317 68-69 6.839819702352646E-4 0.0 0.0 4.6387297230844995 0.0011339701085479386 70-71 6.839819702352646E-4 0.0 0.0 5.146262344524598 0.0011699691596129525 72-73 6.839819702352646E-4 0.0 0.0 5.668842569309874 0.0013679639404705292 74-75 6.839819702352646E-4 0.0 0.0 6.210448292583008 0.001403962991535543 76-77 6.839819702352646E-4 0.0 0.0 6.815412345730566 0.001403962991535543 78-79 6.839819702352646E-4 0.0 0.0 7.48796461725269 0.001403962991535543 80-81 6.839819702352646E-4 0.0 0.0 8.178444416205188 0.0014399620426005571 82-83 6.839819702352646E-4 0.0 0.0 8.89873142943952 0.001547959195795599 84-85 6.839819702352646E-4 0.0 0.0 9.640995863349042 0.001547959195795599 86-87 6.839819702352646E-4 0.0 0.0 10.42465920598333 0.0015659587213281059 88-89 7.199810213002786E-4 0.0 0.0 11.273120840534645 0.0015839582468606128 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2185 0.0 52.353527 1 GTATCAA 3890 0.0 42.096874 1 TCAACGC 4570 0.0 33.340878 4 CAACGCA 4815 0.0 31.740696 5 ATCAACG 4950 0.0 30.877264 3 TATCAAC 5075 0.0 30.211363 2 AACGCAG 5135 0.0 29.743944 6 GTACATG 8045 0.0 28.43815 1 TACATGG 8415 0.0 26.737947 2 ACATGGG 8850 0.0 24.832811 3 ACGCAGA 6135 0.0 24.2833 7 CATGGGG 7435 0.0 23.430052 4 CGCAGAG 6400 0.0 22.908804 8 ATGGGGG 4695 0.0 20.420795 5 GAGTACA 6130 0.0 20.364588 1 TAAGGCG 685 0.0 20.093903 5 AGTACAT 6115 0.0 18.863125 2 GCAGAGT 7500 0.0 18.157999 9 GGTATAT 435 3.6379788E-12 17.458666 1 TATACTG 1065 0.0 17.380886 5 >>END_MODULE