##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921664_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2639368 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.644477390041857 31.0 31.0 34.0 27.0 34.0 2 30.6783885384683 33.0 31.0 34.0 27.0 34.0 3 30.74201096626162 33.0 31.0 34.0 27.0 34.0 4 34.21528449234817 37.0 35.0 37.0 30.0 37.0 5 34.21945859766429 37.0 35.0 37.0 30.0 37.0 6 34.27319153676183 37.0 35.0 37.0 30.0 37.0 7 34.186931492690675 37.0 35.0 37.0 30.0 37.0 8 34.16199143128203 37.0 35.0 37.0 30.0 37.0 9 35.74270696621312 39.0 37.0 39.0 30.0 39.0 10-11 35.64863046759679 39.0 37.0 39.0 30.0 39.0 12-13 35.54287427899406 39.0 37.0 39.0 30.0 39.0 14-15 36.706944806483975 40.0 37.0 41.0 30.0 41.0 16-17 36.64401326378133 40.0 37.0 41.0 30.0 41.0 18-19 36.606808334419455 40.0 37.0 41.0 30.0 41.0 20-21 36.53210143488896 40.0 37.0 41.0 29.0 41.0 22-23 36.435173496079365 40.0 37.0 41.0 29.0 41.0 24-25 36.32649179652098 40.0 37.0 41.0 29.0 41.0 26-27 36.18263444127534 40.0 36.0 41.0 28.0 41.0 28-29 36.04366405139412 40.0 36.0 41.0 27.0 41.0 30-31 35.892393557851726 40.0 36.0 41.0 27.0 41.0 32-33 35.71173099014612 40.0 36.0 41.0 27.0 41.0 34-35 35.533670939406704 39.0 35.0 41.0 26.0 41.0 36-37 35.501952740201446 39.0 35.0 41.0 25.5 41.0 38-39 35.68130571409519 40.0 35.5 41.0 26.5 41.0 40-41 35.73894792238142 40.0 36.0 41.0 26.5 41.0 42-43 35.569702102927664 40.0 35.0 41.0 26.0 41.0 44-45 35.44593270055559 40.0 35.0 41.0 25.0 41.0 46-47 35.28002555914901 40.0 35.0 41.0 24.0 41.0 48-49 35.10791788034105 39.5 35.0 41.0 24.0 41.0 50-51 33.37744016749464 37.0 32.5 39.5 21.0 40.0 52-53 33.49244516111433 37.5 33.5 39.5 21.5 40.0 54-55 34.41484552362535 39.0 34.0 40.5 22.5 41.0 56-57 34.43077888342967 39.0 34.0 41.0 22.0 41.0 58-59 34.235970126181726 38.0 34.0 41.0 22.0 41.0 60-61 33.97796461122511 38.0 34.0 40.0 21.5 41.0 62-63 33.67274552089743 37.0 34.0 40.0 20.0 41.0 64-65 33.37483670333201 37.0 34.0 40.0 19.5 41.0 66-67 33.02735976945996 36.0 33.0 39.0 18.0 41.0 68-69 32.655701289096484 36.0 33.0 39.0 15.5 41.0 70-71 32.24378923287696 35.0 33.0 39.0 12.0 40.5 72-73 31.869081537701447 35.0 32.5 37.5 7.5 40.0 74-75 31.464481838076388 35.0 32.0 37.0 4.5 39.0 76-77 31.074554590341325 35.0 32.0 36.5 2.0 39.0 78-79 30.710143488895827 35.0 32.0 36.0 2.0 38.5 80-81 30.376829225784356 35.0 31.0 36.0 2.0 37.0 82-83 30.042079012854593 35.0 31.0 35.0 2.0 37.0 84-85 29.746862506478827 35.0 31.0 35.0 2.0 36.0 86-87 29.477231291733474 35.0 31.0 35.0 2.0 36.0 88-89 29.209637496552205 35.0 31.0 35.0 2.0 36.0 90-91 28.941518575659025 35.0 30.0 35.0 2.0 35.0 92-93 28.704345320546434 34.0 30.0 35.0 2.0 35.0 94-95 28.423129703777573 34.0 30.0 35.0 2.0 35.0 96-97 28.127983668817688 34.0 29.0 35.0 2.0 35.0 98-99 27.80309566532594 34.0 29.0 35.0 2.0 35.0 100-101 26.67629068777071 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 74609.0 3 13729.0 4 9698.0 5 7649.0 6 6896.0 7 7133.0 8 7812.0 9 8346.0 10 9016.0 11 9678.0 12 9785.0 13 9921.0 14 10615.0 15 11639.0 16 11732.0 17 12677.0 18 11936.0 19 11219.0 20 11664.0 21 12202.0 22 13425.0 23 15613.0 24 17739.0 25 21038.0 26 24734.0 27 29613.0 28 34895.0 29 41399.0 30 49009.0 31 59784.0 32 72849.0 33 94813.0 34 130710.0 35 187985.0 36 313375.0 37 566152.0 38 593078.0 39 105190.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.1798412552202 17.09320939428848 10.793682201881602 25.933267148609723 2 17.362756687855587 19.74724952247206 36.59604283078715 26.293950958885205 3 20.156520605033045 22.611244733864925 28.970681010976612 28.261553650125414 4 13.664648315097905 14.441785071528201 35.608809571922684 36.28475704145121 5 14.29886962640349 36.94485978757348 34.23815791868104 14.518112667342 6 34.766461874473784 34.09089014504198 16.492263644624032 14.650384335860206 7 29.928583310692346 31.252067529638854 20.301369561947073 18.51797959772173 8 28.000854894212523 33.220181111764155 19.798266186622346 18.980697807400972 9 27.445860775215653 14.380834596967127 18.677606287326455 39.49569834049076 10-11 26.380037645873024 24.54412401350098 27.54730600865647 21.52853233196953 12-13 26.5751084444052 22.009084072291344 27.22889182920459 24.18691565409887 14-15 23.569890280492 23.756369477448906 24.291549611804893 28.3821906302542 16-17 23.971290206870364 26.903985949043115 25.3476783764922 23.777045467594327 18-19 23.991539610521983 26.213699101443588 26.591589930287423 23.203171357747006 20-21 24.189609440265354 25.565901117013688 26.68249795887742 23.561991483843535 22-23 24.193243343118173 25.362345481317522 26.35617326180103 24.088237913763273 24-25 23.874493936332055 25.605362436715986 26.4152917071884 24.10485191976356 26-27 23.7077294274087 25.80971425951252 26.474470254802924 24.008086058275858 28-29 23.782691991442544 26.106474853946533 26.309176378934957 23.80165677567597 30-31 24.027548743816084 25.810331839897177 26.181632099379183 23.980487316907556 32-33 23.751295144390248 25.838814982431124 26.09787227834962 24.31201759482901 34-35 24.162241658222065 25.84195459296269 26.19877802892136 23.797025719893885 36-37 24.129218740646387 25.730974321746913 26.340744742842375 23.799062194764325 38-39 23.913047184818684 25.91416832795274 26.348398165326365 23.824386321902207 40-41 24.03523903937548 25.6395951193203 26.51333446113819 23.81183138016603 42-43 23.8393663689354 25.67403419599838 26.2634593251855 24.223140109880724 44-45 23.652715750155163 25.77636651096758 26.536666470540226 24.03425126833703 46-47 23.8317904245764 25.70998731304585 26.318938335025184 24.139283927352572 48-49 23.556157005865785 25.944175852461854 26.342447912464813 24.157219229207556 50-51 23.65599622815702 25.89735014364587 26.453180708329032 23.99347291986808 52-53 23.907162327357767 25.68179919971451 26.429447317069467 23.981591155858258 54-55 23.230157030854944 25.650100298694216 26.768609166131384 24.35113350431945 56-57 23.37746992994648 25.80676389942133 26.521137067053395 24.294629103578792 58-59 23.424947595386648 25.56606664127908 26.68179797276441 24.327187790569866 60-61 23.369767445392498 25.71551320877365 26.798512665052716 24.116206680781136 62-63 23.4881498739421 25.56997494786658 26.76865442444062 24.1732207537507 64-65 23.208354252816182 25.481837776172767 26.685205520275844 24.62460245073521 66-67 23.28445092084686 25.577689590891428 26.527017815990828 24.61084167227088 68-69 23.445888671797153 25.474401543624747 26.65083461797907 24.428875166599035 70-71 23.273374208631033 25.425818091133973 26.613777781657888 24.687029918577107 72-73 23.372477874308878 25.562772769005072 26.451615597304922 24.613133759381128 74-75 23.354357700213914 25.707631598427632 26.434310400133626 24.50370030122483 76-77 23.398516213411853 25.450608741962377 26.51585735469651 24.635017689929256 78-79 23.380563919608406 25.48509713712107 26.553698484827198 24.580640458443323 80-81 23.52632614130319 25.608982342416773 26.34254435659023 24.5221471596898 82-83 23.55013438489649 25.651539403337516 26.367556408527808 24.430769803238185 84-85 23.516746120819924 25.64353687670001 26.329237103444296 24.51047989903577 86-87 23.49886540413961 25.75603806074963 26.29032628626297 24.454770248847794 88-89 23.50220125475698 25.526789843774328 26.25128251473895 24.71972638672974 90-91 23.619350585533276 25.45442531612113 26.338744234477613 24.587479863867976 92-93 23.871426236085007 25.27923968808164 26.36169990987093 24.487634165962426 94-95 23.86541014941538 25.062111630240185 26.47507645640262 24.597401763941818 96-97 23.930416626395434 24.893660209787647 26.412067660228395 24.763855503588523 98-99 23.770801668215704 25.008824302861086 26.3015490710036 24.91882495791961 100-101 24.197495185056557 24.9114340926668 26.272245437457762 24.618825284818882 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 42.0 2 85.5 3 161.5 4 153.5 5 156.0 6 260.5 7 426.5 8 695.0 9 856.0 10 741.5 11 651.0 12 692.0 13 754.5 14 848.5 15 943.0 16 1033.5 17 1150.5 18 1251.0 19 1365.5 20 1534.0 21 1626.0 22 1684.0 23 1878.0 24 2171.5 25 2515.0 26 3066.5 27 3951.0 28 5114.5 29 6971.0 30 9883.0 31 13895.0 32 20939.0 33 26316.5 34 29949.0 35 35823.5 36 43262.5 37 51352.0 38 58390.0 39 65372.0 40 71139.0 41 76277.5 42 81981.5 43 87885.0 44 93574.5 45 100137.5 46 105375.5 47 109021.0 48 112931.5 49 115311.0 50 116577.0 51 117109.0 52 116818.5 53 115748.5 54 112338.5 55 106271.5 56 98298.0 57 88943.0 58 80089.5 59 69628.5 60 57452.5 61 47351.0 62 39096.5 63 30622.5 64 22551.5 65 16590.0 66 12446.0 67 9558.0 68 7365.0 69 5702.0 70 4450.0 71 3288.0 72 2434.5 73 1842.0 74 1381.0 75 1045.0 76 783.5 77 517.0 78 314.5 79 210.5 80 156.0 81 129.0 82 108.0 83 82.5 84 66.5 85 53.0 86 49.0 87 47.5 88 43.0 89 35.0 90 26.0 91 28.5 92 25.0 93 18.0 94 14.0 95 10.5 96 9.0 97 6.0 98 6.5 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04914055182907424 2 0.06918322871232811 3 0.06668263008417166 4 0.06581120935011715 5 0.06274229285192516 6 0.010229721660639972 7 0.013222862442827221 8 0.016860096811054767 9 0.005834730132365021 10-11 0.011385301329712265 12-13 0.021728686564359348 14-15 0.038039409434379744 16-17 0.026010014518627184 18-19 0.009320413068583085 20-21 0.019000760788188686 22-23 0.03534937151621145 24-25 0.032810885030052646 26-27 0.019133368291196984 28-29 0.01007817022863049 30-31 0.01000239451262575 32-33 0.006952421943434944 34-35 0.0040729447352548034 36-37 5.304300120331837E-4 38-39 0.0036940661552311007 40-41 8.524768050533309E-4 42-43 0.21918125854371198 44-45 0.18993183216588214 46-47 0.1957286744402448 48-49 0.2032494142537153 50-51 0.1936827301081168 52-53 0.20110875027658137 54-55 0.1983808245004107 56-57 0.2012034699215873 58-59 0.20970929404311944 60-61 0.21459682772542518 62-63 0.19932802095046998 64-65 0.1993090770214688 66-67 0.1966190391033005 68-69 0.19129579505396746 70-71 0.18379399916949815 72-73 0.19536873978922226 74-75 0.19409949654614286 76-77 0.18790483176275533 78-79 0.2050111996508255 80-81 0.21641544490953896 82-83 0.21601762240051406 84-85 0.21080804192518815 86-87 0.22927837270134366 88-89 0.22240172647391346 90-91 0.22891843805032114 92-93 0.2243908390190379 94-95 0.22749764337523223 96-97 0.2342037942416518 98-99 0.2279144098132583 100-101 0.23337026136559963 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2639368.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.19538237509207 #Duplication Level Percentage of deduplicated Percentage of total 1 78.4150108435449 46.41806550830632 2 11.805455204997777 13.976568699437287 3 3.968773272371672 7.047991542542597 4 1.8259513630850748 4.323515565445663 5 1.0301765805400327 3.0490848299466036 6 0.6346321686579295 2.2540376334744034 7 0.4179686819031784 1.7319271162250307 8 0.3275147981923482 1.550989096999773 9 0.23252141098787465 1.2387774450440858 >10 1.2640876961523633 13.059102456206364 >50 0.056383057051027106 2.263168027141952 >100 0.01972669839044135 1.9863427000451603 >500 0.001091778933285541 0.4426276259960648 >1k 7.064451920978965E-4 0.6578017531887 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.788785800237026E-5 0.0 2 0.0 0.0 0.0 3.788785800237026E-5 0.0 3 0.0 0.0 0.0 3.788785800237026E-5 0.0 4 0.0 0.0 0.0 3.788785800237026E-5 0.0 5 0.0 0.0 0.0 7.577571600474052E-5 0.0 6 0.0 0.0 0.0 7.577571600474052E-5 0.0 7 0.0 3.788785800237026E-5 0.0 7.577571600474052E-5 0.0 8 0.0 3.788785800237026E-5 0.0 7.577571600474052E-5 0.0 9 0.0 3.788785800237026E-5 0.0 7.577571600474052E-5 0.0 10-11 0.0 3.788785800237026E-5 0.0 1.326075030082959E-4 0.0 12-13 0.0 3.788785800237026E-5 0.0 1.8943929001185133E-4 3.788785800237026E-5 14-15 0.0 3.788785800237026E-5 0.0 1.8943929001185133E-4 5.6831787003555395E-5 16-17 0.0 3.788785800237026E-5 0.0 1.8943929001185133E-4 7.577571600474052E-5 18-19 0.0 3.788785800237026E-5 0.0 2.0838321901303647E-4 1.1366357400711079E-4 20-21 0.0 3.788785800237026E-5 0.0 3.031028640189621E-4 1.1366357400711079E-4 22-23 0.0 3.788785800237026E-5 0.0 4.925421540308134E-4 1.5155143200948107E-4 24-25 0.0 3.788785800237026E-5 0.0 8.903646630557011E-4 2.2732714801422158E-4 26-27 0.0 3.788785800237026E-5 0.0 0.0018375611131149576 2.2732714801422158E-4 28-29 0.0 3.788785800237026E-5 0.0 0.011176918110699229 2.2732714801422158E-4 30-31 0.0 3.788785800237026E-5 0.0 0.046621009271916605 2.462710770154067E-4 32-33 0.0 3.788785800237026E-5 0.0 0.1123753868350302 2.6521500601659186E-4 34-35 0.0 3.788785800237026E-5 0.0 0.2062993868229061 2.6521500601659186E-4 36-37 0.0 3.788785800237026E-5 0.0 0.3459161435616405 2.6521500601659186E-4 38-39 0.0 3.788785800237026E-5 0.0 0.555833820823773 2.6521500601659186E-4 40-41 0.0 3.788785800237026E-5 0.0 0.7840513335010503 2.6521500601659186E-4 42-43 0.0 3.788785800237026E-5 0.0 1.0340922523876928 2.6521500601659186E-4 44-45 0.0 3.788785800237026E-5 0.0 1.3449052955101373 2.6521500601659186E-4 46-47 0.0 3.788785800237026E-5 0.0 1.689836354763716 2.6521500601659186E-4 48-49 0.0 3.788785800237026E-5 0.0 2.035146292597319 2.6521500601659186E-4 50-51 0.0 3.788785800237026E-5 0.0 2.3930349992877082 2.6521500601659186E-4 52-53 0.0 3.788785800237026E-5 0.0 2.763313035544873 2.6521500601659186E-4 54-55 0.0 3.788785800237026E-5 0.0 3.2146332000691076 2.6521500601659186E-4 56-57 0.0 3.788785800237026E-5 0.0 3.719280524731678 2.6521500601659186E-4 58-59 0.0 3.788785800237026E-5 0.0 4.21818783890689 2.84158935017777E-4 60-61 0.0 3.788785800237026E-5 0.0 4.727324874742742 3.031028640189621E-4 62-63 0.0 3.788785800237026E-5 0.0 5.244588856120101 3.031028640189621E-4 64-65 0.0 3.788785800237026E-5 0.0 5.825883317521467 3.031028640189621E-4 66-67 0.0 3.788785800237026E-5 0.0 6.499756759951625 3.2204679302014726E-4 68-69 0.0 3.788785800237026E-5 0.0 7.191683766719912 3.4099072202133237E-4 70-71 0.0 3.788785800237026E-5 0.0 7.8826067452511355 3.7887858002370265E-4 72-73 0.0 3.788785800237026E-5 0.0 8.59029510094841 4.1676643802607293E-4 74-75 0.0 3.788785800237026E-5 0.0 9.342482745869464 4.1676643802607293E-4 76-77 1.894392900118513E-5 3.788785800237026E-5 0.0 10.196475065242891 4.3571036702725805E-4 78-79 3.788785800237026E-5 3.788785800237026E-5 0.0 11.112717135314213 4.5465429602844316E-4 80-81 3.788785800237026E-5 3.788785800237026E-5 0.0 12.014277660409613 4.925421540308134E-4 82-83 3.788785800237026E-5 3.788785800237026E-5 0.0 12.913110259728844 5.304300120331837E-4 84-85 7.577571600474052E-5 3.788785800237026E-5 0.0 13.853808942140695 5.304300120331837E-4 86-87 7.577571600474052E-5 5.6831787003555395E-5 0.0 14.899229664071097 5.493739410343688E-4 88-89 7.577571600474052E-5 7.577571600474052E-5 0.0 15.998394312577858 5.68317870035554E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1905 0.0 47.590366 1 GTATCAA 3250 0.0 40.455452 1 TCAACGC 3710 0.0 34.160007 4 CAACGCA 3825 0.0 33.132347 5 GTACATG 7030 0.0 31.126211 1 AACGCAG 4190 0.0 30.455935 6 ATCAACG 4195 0.0 30.21064 3 GAGTACA 5125 0.0 29.822403 1 TATCAAC 4300 0.0 29.694273 2 TACATGG 7370 0.0 29.239992 2 ACATGGG 7810 0.0 27.531368 3 CATGGGG 5890 0.0 25.78786 4 ACGCAGA 4925 0.0 25.23935 7 AGTACAT 5570 0.0 24.713354 2 CCCTATA 420 0.0 23.733341 2 CGCAGAG 5210 0.0 23.495329 8 ATGGGGG 3810 0.0 20.804817 5 ACCGCGT 140 4.891408E-4 20.333998 8 GCAGAGT 6175 0.0 18.363712 9 AGAGTAC 4975 0.0 17.404812 10-11 >>END_MODULE