##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921664_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2639368 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.293552092773723 33.0 31.0 34.0 28.0 34.0 2 31.419016976791415 34.0 31.0 34.0 28.0 34.0 3 31.49794647809627 34.0 31.0 34.0 28.0 34.0 4 34.981500116694605 37.0 35.0 37.0 32.0 37.0 5 34.71559441502663 37.0 35.0 37.0 32.0 37.0 6 34.68955560573592 37.0 35.0 37.0 32.0 37.0 7 34.566251466260105 37.0 35.0 37.0 32.0 37.0 8 34.50843989924861 37.0 35.0 37.0 31.0 37.0 9 36.082260222901844 39.0 37.0 39.0 31.0 39.0 10-11 35.973778760673014 39.0 37.0 39.0 31.0 39.0 12-13 35.88759297680354 39.0 37.0 39.0 30.0 39.0 14-15 37.11537724182456 40.0 38.0 41.0 31.0 41.0 16-17 37.074209242515636 40.0 38.0 41.0 31.0 41.0 18-19 37.02573760081959 40.0 37.5 41.0 31.0 41.0 20-21 36.962106648258214 40.0 37.0 41.0 30.5 41.0 22-23 36.86959359210235 40.0 37.0 41.0 30.0 41.0 24-25 36.78115291236387 40.0 37.0 41.0 30.0 41.0 26-27 36.643485296480065 40.0 37.0 41.0 30.0 41.0 28-29 36.517740800070314 40.0 37.0 41.0 30.0 41.0 30-31 36.35141518727211 40.0 36.5 41.0 29.5 41.0 32-33 36.29240996329425 40.0 36.0 41.0 29.5 41.0 34-35 36.41782957132162 40.0 37.0 41.0 30.0 41.0 36-37 36.40889087842241 40.0 37.0 41.0 30.0 41.0 38-39 36.29544061305585 40.0 36.5 41.0 29.0 41.0 40-41 36.20151036157141 40.0 36.0 41.0 29.0 41.0 42-43 36.06659359361787 40.0 36.0 41.0 28.0 41.0 44-45 35.92286297325724 40.0 36.0 41.0 28.0 41.0 46-47 35.75621663974103 40.0 35.0 41.0 27.0 41.0 48-49 35.602257623794785 40.0 35.0 41.0 27.0 41.0 50-51 35.43023651874236 39.0 35.0 41.0 26.0 41.0 52-53 35.24668064476042 39.0 35.0 41.0 26.0 41.0 54-55 35.021829468266645 39.0 35.0 41.0 26.0 41.0 56-57 34.78928724603769 39.0 35.0 41.0 25.0 41.0 58-59 34.53662164578793 38.0 34.0 40.0 24.5 41.0 60-61 34.253567899588084 38.0 34.0 40.0 23.5 41.0 62-63 33.93361706287263 37.0 34.0 40.0 23.0 41.0 64-65 33.58624469948867 37.0 34.0 40.0 22.0 41.0 66-67 33.23147719454051 36.0 33.5 39.0 22.0 41.0 68-69 32.860007206270595 35.5 33.0 39.0 21.0 40.5 70-71 32.463338382521876 35.0 33.0 38.5 20.0 40.0 72-73 32.099703224408266 35.0 33.0 37.0 18.5 39.5 74-75 31.695494906356373 35.0 32.5 37.0 17.0 39.0 76-77 28.990659885245257 32.5 28.0 34.5 9.0 36.5 78-79 30.566003679668768 34.5 31.0 35.5 10.5 37.0 80-81 30.75301246358977 35.0 32.0 35.0 9.0 37.0 82-83 30.582064153236686 35.0 32.0 35.0 7.0 37.0 84-85 30.38315043601347 35.0 32.0 35.0 4.0 36.0 86-87 30.17850201260302 35.0 31.5 35.0 2.0 36.0 88-89 29.906410360358993 34.5 31.0 35.0 2.0 35.5 90-91 29.70464349798891 34.0 31.0 35.0 2.0 35.0 92-93 29.53645872799852 34.0 31.0 35.0 2.0 35.0 94-95 29.420301564616985 34.0 31.0 35.0 2.0 35.0 96-97 29.201190019731996 34.0 31.0 35.0 2.0 35.0 98-99 28.98506346973973 34.0 31.0 35.0 2.0 35.0 100-101 27.84050140033523 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 51628.0 3 18101.0 4 10028.0 5 7041.0 6 6134.0 7 6400.0 8 6557.0 9 6961.0 10 7839.0 11 8486.0 12 8864.0 13 9611.0 14 10217.0 15 11034.0 16 11939.0 17 12512.0 18 11986.0 19 11001.0 20 10917.0 21 10868.0 22 11123.0 23 12506.0 24 14711.0 25 17401.0 26 20759.0 27 24852.0 28 29844.0 29 35803.0 30 43430.0 31 53882.0 32 67817.0 33 89596.0 34 128130.0 35 190288.0 36 333235.0 37 627763.0 38 626930.0 39 73173.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.017920923885406 18.585141085911445 11.291882152393125 27.10505583781002 2 16.341177776607463 20.97149956258385 35.08679935272261 27.60052330808608 3 18.803694731820475 23.653702821672013 28.67661017411558 28.86599227239193 4 13.27857398347368 15.535104789965384 34.46800223099261 36.718318995568325 5 14.022170986113194 37.27301873149702 34.26058563782134 14.444224644568443 6 34.8456633073507 34.681151672377084 16.13297632313086 14.340208697141355 7 29.77637070692681 31.4018734788025 20.244998044986527 18.57675776928416 8 28.009697776134285 33.63441551159217 19.48542226775501 18.870464444518536 9 27.135738555593612 14.363438520130579 18.53788482697373 39.96293809730208 10-11 26.303758435180946 24.782227579547275 27.470511810911695 21.44350217436008 12-13 26.428017722491603 22.15862721161737 27.24946748413819 24.163887581752835 14-15 23.458876633024982 23.885685835917254 24.20810874967391 28.447328781383852 16-17 23.910079988845816 27.13251808766341 25.228369064109284 23.729032859381487 18-19 23.99103257945571 26.39486051773706 26.45290550790882 23.161201394898406 20-21 24.1450539666302 25.6708201317553 26.58067999374849 23.603445907866007 22-23 24.114390263123596 25.509155979764852 26.249333173699156 24.127120583412392 24-25 23.805253288064723 25.75419425151547 26.379422408454484 24.061130051965318 26-27 23.692723071534104 25.984586405414934 26.411253617682156 23.911436905368806 28-29 23.752357442793826 26.258033776673084 26.224880387307365 23.76472839322572 30-31 24.0699769814057 25.940832227623563 26.042671839424226 23.946518951546516 32-33 23.77509086014141 25.984153210764266 25.98839710831431 24.252358820780017 34-35 24.081015948558417 26.011268950517408 26.181743087631816 23.72597201329236 36-37 24.050747538799687 25.829313584370777 26.29883895529847 23.821099921531065 38-39 23.863117988851876 26.0469172923215 26.295404809030043 23.794559909796586 40-41 24.02754223481146 25.760165983907807 26.383666528750894 23.828625252529847 42-43 23.81488813447318 25.80404857133709 26.12070613461982 24.260357159569914 44-45 23.61064958674993 25.86832151094214 26.4143769269563 24.10665197535163 46-47 23.73151779868571 25.853504116249184 26.220306475666238 24.19467160939887 48-49 23.503637133852134 26.060429696351044 26.259981372903408 24.175951796893415 50-51 23.602089110976017 25.975555302542773 26.357455155325958 24.06490043115525 52-53 23.88389812527469 25.746783262355454 26.283436642771623 24.08588196959823 54-55 23.17897104733852 25.776956502712032 26.58472187148161 24.459350578467838 56-57 23.245508505563333 25.89730425079239 26.371509062559795 24.485678181084474 58-59 23.233833249492932 25.758253542849076 26.484036692728242 24.52387651492975 60-61 23.22193219007029 25.90722617064222 26.544699074065303 24.326142565222185 62-63 23.2630916968743 25.72765965993506 26.50387796512797 24.505370678062672 64-65 22.961105543485345 25.684615816133917 26.407116335413996 24.947162304966746 66-67 23.00760436741698 25.82330730936338 26.194284886743883 24.974803436475753 68-69 23.125481188947525 25.671067859440328 26.275958615570826 24.927492336041325 70-71 22.95372909900612 25.54783712485128 26.276694240193756 25.22173953594884 72-73 23.00937598069165 25.605546299258197 26.13347109129472 25.251606628755436 74-75 22.82147486185961 25.771501769864553 26.060914417384843 25.346108950890994 76-77 22.818264301652633 25.444436871329977 26.248549743306228 25.48874908371116 78-79 22.721660680483424 25.470482909042374 26.27198178056594 25.535874629908268 80-81 22.77512879623551 25.545074843707138 26.032336636782766 25.64745972327458 82-83 22.698056331003578 25.510665052690463 26.114939714653655 25.676338901652308 84-85 22.53952850108227 25.37877610435297 26.135911325754275 25.945784068810486 86-87 22.45545266169387 25.551885784717292 26.067067015643484 25.92559453794535 88-89 22.373736270312527 25.282914916071153 26.064781612121546 26.278567201494766 90-91 22.302418242489967 25.171293126312342 26.137875767646268 26.38841286355142 92-93 22.33121664500572 24.94701961274137 26.300921776289616 26.420841965963287 94-95 22.213277672933515 24.67118045378736 26.433618740028557 26.681923133250567 96-97 22.06733701417537 24.555931563697257 26.461800859006296 26.914930563121086 98-99 21.895570384613563 24.61066460806926 26.308344423553258 27.18542058376392 100-101 21.849441058739508 24.58470124442811 26.336846173227276 27.229011523605113 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 47.0 1 39.0 2 70.0 3 122.5 4 111.5 5 107.5 6 228.0 7 419.0 8 593.5 9 671.5 10 573.5 11 483.5 12 480.0 13 546.5 14 612.5 15 639.5 16 698.0 17 801.0 18 870.0 19 907.5 20 1039.5 21 1164.5 22 1257.0 23 1449.5 24 1707.0 25 2128.0 26 2754.5 27 3632.0 28 4987.5 29 6989.5 30 9954.5 31 14018.0 32 21283.5 33 26708.5 34 29961.0 35 35544.5 36 42747.0 37 50559.5 38 57620.5 39 64712.0 40 70479.0 41 75459.5 42 80856.5 43 86643.5 44 92372.0 45 98994.5 46 104077.5 47 107890.5 48 112661.5 49 115637.5 50 116830.5 51 117838.0 52 118305.0 53 118011.0 54 115265.5 55 109289.5 56 101056.0 57 91034.5 58 81627.5 59 71172.5 60 59159.5 61 48220.0 62 39602.5 63 30911.0 64 22065.0 65 16030.0 66 12174.0 67 9321.5 68 7056.5 69 5448.0 70 4149.5 71 2973.5 72 2143.5 73 1686.5 74 1272.5 75 900.0 76 622.0 77 372.5 78 208.0 79 126.0 80 73.5 81 44.0 82 30.0 83 18.5 84 10.5 85 8.5 86 8.5 87 6.0 88 2.5 89 2.0 90 2.5 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16049296649804046 2 1.8943929001185133E-4 3 0.009812955222613898 4 0.006971365872436129 5 0.02288426623343164 6 0.0015534021780971808 7 0.0 8 0.0 9 0.0 10-11 0.04681044856192847 12-13 3.7887858002370265E-4 14-15 0.00502014118531406 16-17 0.0 18-19 0.0013639628880853295 20-21 2.0838321901303647E-4 22-23 0.0 24-25 4.3571036702725805E-4 26-27 0.0028226454211765844 28-29 0.004565486889285617 30-31 0.015704517141982476 32-33 0.01077909560167434 34-35 0.009775067364611529 36-37 0.004054000806253618 38-39 0.0 40-41 0.0028794772081801403 42-43 0.009074141991567678 44-45 0.006327272286395835 46-47 0.002727925776170659 48-49 0.007653347316478793 50-51 0.0024058789831505117 52-53 0.0018186171841137726 54-55 0.004224496167264284 56-57 0.008070113754504865 58-59 0.01612128358000855 60-61 0.007463908026466942 62-63 0.02078149011430009 64-65 0.04167664380260729 66-67 0.0609047317388102 68-69 0.051944253321249634 70-71 0.06872857441629966 72-73 0.03500838079419013 74-75 0.02834011778577296 76-77 0.21908653889870605 78-79 0.08274708187717666 80-81 0.06711834045119892 82-83 0.028415893501777697 84-85 0.05296722548731363 86-87 0.0663984711491539 88-89 0.28512507539683746 90-91 0.28878125369406615 92-93 0.051660094386231856 94-95 0.010172889873636416 96-97 0.014719432833920848 98-99 0.001155579669072293 100-101 1.1366357400711079E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2639368.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.64304170553438 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94142056552444 45.70721976812644 2 12.056826847010862 14.14097999251329 3 4.0020704295796765 7.0408074933098055 4 1.8568702387282385 4.355700754060226 5 1.0572918615296996 3.1001405365304127 6 0.6730765022319853 2.368275203484331 7 0.4496404381221926 1.8457798075706147 8 0.3290904467163031 1.5439091833341683 9 0.25763549935164076 1.3597676399974 >10 1.2980596696260063 13.267452253495044 >50 0.05683229193833803 2.2645673464476497 >100 0.01956630520681045 1.9854297085459227 >500 8.418303055917783E-4 0.3491800522851386 >1k 7.77074128219784E-4 0.6707902602996128 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.1366357400711079E-4 0.0 5 0.0 0.0 0.0 1.1366357400711079E-4 0.0 6 0.0 0.0 0.0 1.1366357400711079E-4 0.0 7 0.0 0.0 0.0 1.1366357400711079E-4 0.0 8 0.0 0.0 0.0 1.1366357400711079E-4 0.0 9 0.0 0.0 0.0 1.1366357400711079E-4 0.0 10-11 0.0 0.0 0.0 1.1366357400711079E-4 0.0 12-13 0.0 0.0 0.0 1.1366357400711079E-4 0.0 14-15 0.0 0.0 0.0 1.1366357400711079E-4 1.894392900118513E-5 16-17 0.0 0.0 0.0 1.5155143200948107E-4 5.6831787003555395E-5 18-19 0.0 0.0 0.0 2.0838321901303647E-4 1.1366357400711079E-4 20-21 0.0 0.0 0.0 3.031028640189621E-4 1.326075030082959E-4 22-23 0.0 0.0 0.0 5.304300120331837E-4 1.7049536101066619E-4 24-25 0.0 0.0 0.0 9.471964500592567E-4 1.8943929001185133E-4 26-27 0.0 0.0 0.0 0.0019512246871220685 1.8943929001185133E-4 28-29 0.0 0.0 0.0 0.011271637755705152 1.8943929001185133E-4 30-31 0.0 0.0 0.0 0.04677256070392609 1.8943929001185133E-4 32-33 3.788785800237026E-5 0.0 0.0 0.11320891971108235 1.8943929001185133E-4 34-35 3.788785800237026E-5 0.0 0.0 0.20713291969895825 1.8943929001185133E-4 36-37 3.788785800237026E-5 0.0 0.0 0.34676862036669387 1.8943929001185133E-4 38-39 3.788785800237026E-5 0.0 0.0 0.5550760636637255 1.8943929001185133E-4 40-41 5.6831787003555395E-5 0.0 0.0 0.7823274359619424 1.8943929001185133E-4 42-43 1.1366357400711079E-4 0.0 0.0 1.0315916537595364 1.8943929001185133E-4 44-45 1.1366357400711079E-4 0.0 0.0 1.341703771508937 1.8943929001185133E-4 46-47 1.5155143200948104E-4 0.0 0.0 1.6853087557324329 1.8943929001185133E-4 48-49 1.5155143200948104E-4 0.0 0.0 2.0295010017549657 2.6521500601659186E-4 50-51 1.5155143200948104E-4 0.0 0.0 2.3848891098171987 2.6521500601659186E-4 52-53 1.5155143200948104E-4 0.0 0.0 2.7526097156592035 2.84158935017777E-4 54-55 1.5155143200948104E-4 0.0 0.0 3.200860963685246 3.031028640189621E-4 56-57 1.5155143200948104E-4 0.0 0.0 3.7019847175535965 3.031028640189621E-4 58-59 1.5155143200948104E-4 0.0 0.0 4.19740634879259 3.031028640189621E-4 60-61 1.5155143200948104E-4 0.0 0.0 4.702981925976218 3.031028640189621E-4 62-63 1.5155143200948104E-4 0.0 0.0 5.217442205861403 3.4099072202133237E-4 64-65 1.5155143200948104E-4 0.0 0.0 5.797183265084671 3.4099072202133237E-4 66-67 1.5155143200948104E-4 0.0 0.0 6.466548052412547 3.4099072202133237E-4 68-69 1.5155143200948104E-4 0.0 0.0 7.154383170516578 3.4099072202133237E-4 70-71 1.5155143200948104E-4 0.0 0.0 7.842900270064652 3.4099072202133237E-4 72-73 1.5155143200948104E-4 0.0 0.0 8.55083489683894 3.7887858002370265E-4 74-75 1.5155143200948104E-4 0.0 0.0 9.302946766043991 3.7887858002370265E-4 76-77 1.5155143200948104E-4 0.0 0.0 10.15517730002031 3.7887858002370265E-4 78-79 1.5155143200948104E-4 0.0 0.0 11.071362538304625 3.7887858002370265E-4 80-81 1.5155143200948104E-4 0.0 0.0 11.974305970217113 3.7887858002370265E-4 82-83 1.5155143200948104E-4 0.0 0.0 12.87482457921745 3.7887858002370265E-4 84-85 1.5155143200948104E-4 0.0 0.0 13.818630065985493 3.7887858002370265E-4 86-87 1.5155143200948104E-4 0.0 0.0 14.864675937572933 3.7887858002370265E-4 88-89 1.5155143200948104E-4 0.0 0.0 15.967989306530956 3.7887858002370265E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1855 0.0 51.75908 1 GTATCAA 3445 0.0 41.253525 1 TCAACGC 4100 0.0 33.57251 4 CAACGCA 4140 0.0 33.38683 5 GTACATG 7265 0.0 32.777905 1 AACGCAG 4405 0.0 31.15734 6 ATCAACG 4455 0.0 30.897844 3 TACATGG 7690 0.0 30.614925 2 TATCAAC 4680 0.0 29.615215 2 ACATGGG 8010 0.0 28.38448 3 CATGGGG 5940 0.0 26.44912 4 GAGTACA 5175 0.0 25.07445 1 ATGGGGG 3680 0.0 23.233103 5 ACGCAGA 5845 0.0 23.155838 7 CGCAGAG 6185 0.0 21.499012 8 AGTACAT 5625 0.0 21.433304 2 AGAGTAC 5770 0.0 18.85134 5 TATACCG 210 1.9577916E-5 18.094776 5 GCAGAGT 7135 0.0 17.305317 9 CAGAGTA 6410 0.0 17.253117 4 >>END_MODULE