##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921663_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3382149 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.503830257034803 31.0 31.0 34.0 27.0 34.0 2 30.541410505569093 33.0 31.0 34.0 26.0 34.0 3 30.608084090913795 33.0 31.0 34.0 26.0 34.0 4 34.07073165611568 37.0 35.0 37.0 30.0 37.0 5 34.0739071519321 37.0 35.0 37.0 30.0 37.0 6 34.121519779288256 37.0 35.0 37.0 30.0 37.0 7 34.02938782413194 37.0 35.0 37.0 30.0 37.0 8 34.00173233053896 37.0 35.0 37.0 30.0 37.0 9 35.57366514603585 39.0 37.0 39.0 30.0 39.0 10-11 35.473167947361276 39.0 37.0 39.0 30.0 39.0 12-13 35.369367227759625 39.0 35.0 39.0 30.0 39.0 14-15 36.52963441291321 40.0 37.0 41.0 29.0 41.0 16-17 36.46565098107742 40.0 37.0 41.0 29.0 41.0 18-19 36.428287754324245 40.0 37.0 41.0 29.0 41.0 20-21 36.34951210014698 40.0 37.0 41.0 28.0 41.0 22-23 36.251626406760906 40.0 37.0 41.0 27.5 41.0 24-25 36.143289222325805 40.0 36.0 41.0 27.0 41.0 26-27 36.001532014112925 40.0 36.0 41.0 27.0 41.0 28-29 35.863243754192965 40.0 36.0 41.0 27.0 41.0 30-31 35.72343841149518 40.0 36.0 41.0 26.5 41.0 32-33 35.55221073938493 40.0 35.5 41.0 25.5 41.0 34-35 35.382880677344495 39.0 35.0 41.0 25.0 41.0 36-37 35.35547665108781 39.0 35.0 41.0 25.0 41.0 38-39 35.544401503304556 40.0 35.5 41.0 25.5 41.0 40-41 35.60981701279275 40.0 36.0 41.0 26.0 41.0 42-43 35.451073858662056 40.0 35.0 41.0 25.0 41.0 44-45 35.33425833693312 40.0 35.0 41.0 24.0 41.0 46-47 35.1852227681276 40.0 35.0 41.0 24.0 41.0 48-49 35.0230369803341 39.5 35.0 41.0 23.0 41.0 50-51 33.30721635859331 37.0 32.5 39.5 20.0 40.0 52-53 33.43217004927932 37.5 33.5 39.5 21.0 40.0 54-55 34.350703945923144 39.0 34.0 40.5 22.0 41.0 56-57 34.36877204404655 39.0 34.0 41.0 22.0 41.0 58-59 34.17559294401282 38.5 34.0 41.0 21.0 41.0 60-61 33.922026202866874 38.0 34.0 40.0 20.0 41.0 62-63 33.623150399346684 37.0 34.0 40.0 19.5 41.0 64-65 33.331965120401264 37.0 34.0 40.0 18.0 41.0 66-67 32.98660984480577 36.0 33.0 39.5 16.5 41.0 68-69 32.62027663476683 36.0 33.0 39.0 13.0 41.0 70-71 32.21312618101686 35.0 33.0 39.0 9.5 40.5 72-73 31.850502446817096 35.0 32.5 37.5 7.0 40.0 74-75 31.44716850144686 35.0 32.0 37.0 3.5 39.0 76-77 31.066262604042578 35.0 32.0 36.5 2.0 39.0 78-79 30.719826063251503 35.0 32.0 36.0 2.0 38.5 80-81 30.399796992976952 35.0 31.0 36.0 2.0 37.0 82-83 30.080492314206147 35.0 31.0 35.0 2.0 37.0 84-85 29.801945745146057 35.0 31.0 35.0 2.0 36.0 86-87 29.557893960319312 35.0 31.0 35.0 2.0 36.0 88-89 29.319685945237776 35.0 31.0 35.0 2.0 36.0 90-91 29.075736018726555 35.0 30.5 35.0 2.0 35.5 92-93 28.857720934234415 34.0 30.0 35.0 2.0 35.0 94-95 28.605618203101045 34.0 30.0 35.0 2.0 35.0 96-97 28.34500623715868 34.0 30.0 35.0 2.0 35.0 98-99 28.048002616088173 34.0 29.5 35.0 2.0 35.0 100-101 26.94366170739373 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 107535.0 3 19192.0 4 13280.0 5 10099.0 6 9155.0 7 9585.0 8 10029.0 9 10850.0 10 11518.0 11 12301.0 12 12157.0 13 12555.0 14 12936.0 15 13919.0 16 14116.0 17 14493.0 18 14165.0 19 13659.0 20 13890.0 21 14947.0 22 15877.0 23 18486.0 24 21973.0 25 25753.0 26 30848.0 27 36340.0 28 43215.0 29 50985.0 30 61038.0 31 74734.0 32 92706.0 33 118818.0 34 164515.0 35 238785.0 36 402845.0 37 730906.0 38 769973.0 39 133957.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.660546925150854 17.324502888097534 11.111558129064207 25.9033920576874 2 16.805680399980826 19.394827209726603 37.63673300072609 26.162759389566485 3 19.74483321582517 22.90811551915482 28.795318924455614 28.5517323405644 4 13.284140701971353 14.528256669556288 36.041817681535896 36.14578494693645 5 14.211869027624221 36.943161340350606 34.52259898622532 14.32237064579986 6 34.68665107159216 34.753537796174086 16.409454388251117 14.150356743982634 7 30.03044588315239 30.999592517220435 20.576963679622725 18.392997920004447 8 27.6047411567585 34.02314037464861 19.685020975141516 18.68709749345137 9 27.084121832598452 14.609580502620972 18.705646916337074 39.6006507484435 10-11 26.14239571391101 24.632325870981457 27.775405554137805 21.449872860969723 12-13 26.28150682703369 22.08550575055968 27.517840190926268 24.115147231480357 14-15 23.44789206143005 23.698137115537172 24.34780409632268 28.5061667267101 16-17 23.92968513400969 26.965561236561175 25.298573189544214 23.80618043988492 18-19 23.982072921568808 26.26476963603678 26.44417052813263 23.30898691426178 20-21 24.15014917238419 25.701358616858457 26.500917273019102 23.647574937738256 22-23 24.15744859952126 25.490860411759886 26.162786742546697 24.188904246172157 24-25 23.906587405129127 25.710749611880125 26.27973084045367 24.10293214253708 26-27 23.743171439112047 25.898471895791115 26.24268533503476 24.11567133006208 28-29 23.98945995268452 25.895326661183343 26.22445918459528 23.89075420153686 30-31 24.10913252271007 25.796685749432246 25.997867974072676 24.09631375378501 32-33 23.80980683155192 25.91382215799734 26.002293999143077 24.27407701130766 34-35 24.219532759731806 25.857530438299985 26.02425306356705 23.898683738401157 36-37 24.31561199274717 25.642602178658258 26.01823851998483 24.023547308609743 38-39 24.05670712289648 25.895540195191675 26.066237552886463 23.98151512902538 40-41 24.1606179117655 25.67998412820906 26.239030117669458 23.92036784235598 42-43 24.0363929883285 25.56074348182188 26.10176678570878 24.30109674414084 44-45 23.811373870287692 25.706125274702813 26.298714619677412 24.18378623533209 46-47 24.10018776577686 25.67925114102223 26.057345291724264 24.16321580147665 48-49 23.838790842435767 25.87778507766479 26.03007043197637 24.253353647923078 50-51 23.85038521449423 25.864784765141508 26.140312520552378 24.144517499811883 52-53 24.063661992611838 25.66898851008225 26.18397052556045 24.083378971745464 54-55 23.640026207081867 25.621970102418263 26.440297047170525 24.29770664332935 56-57 23.67192051632216 25.754099334451148 26.305837243686515 24.268142905540177 58-59 23.72391795967316 25.524337064885756 26.451509200981615 24.30023577445947 60-61 23.69596641800277 25.71913537675966 26.410784782438963 24.17411342279861 62-63 23.729615476513718 25.567094484467034 26.502824640326267 24.20046539869298 64-65 23.57033705282019 25.457667530965438 26.40984293305398 24.562152483160393 66-67 23.53178094772549 25.5939652490779 26.30877364499548 24.56548015820113 68-69 23.699360576439545 25.475020355528923 26.38504617746348 24.440572890568056 70-71 23.6216423329718 25.36206544407975 26.347054666872243 24.669237556076208 72-73 23.669725368581776 25.543740701394103 26.16745459791806 24.61907933210606 74-75 23.67270397677407 25.65575112111775 26.207085538229098 24.464459363879083 76-77 23.686176567560466 25.41396120967883 26.35953194248726 24.540330280273444 78-79 23.64676994640959 25.42385310228102 26.341430534311566 24.587946416997827 80-81 23.805809983889308 25.628878589607552 26.054062238779036 24.511249187724108 82-83 23.82651380104871 25.548548424565958 26.180005072869157 24.444932701516173 84-85 23.723395886570696 25.560067300371834 26.208404487264293 24.508132325793177 86-87 23.727500080755075 25.65030060149935 26.174912228866692 24.447287088878884 88-89 23.715472177496963 25.421518392243502 26.203637125474 24.65937230478554 90-91 23.822879930322667 25.495245615420643 26.16281387139654 24.519060582860153 92-93 24.00491265065329 25.320909169303313 26.255832994769975 24.418345185273427 94-95 23.90686887464359 25.16753488312824 26.312641199082577 24.612955043145597 96-97 24.01003486716248 25.011891584314665 26.29886477972044 24.67920876880241 98-99 23.9096255284382 25.042077246104068 26.236924344822572 24.81137288063516 100-101 24.203834114646465 24.922174929183928 26.262760673978153 24.611230282191453 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 40.0 2 72.5 3 128.5 4 121.5 5 115.0 6 199.0 7 359.0 8 567.0 9 653.5 10 588.5 11 551.0 12 595.5 13 671.0 14 784.5 15 895.5 16 968.5 17 1062.0 18 1184.5 19 1292.5 20 1372.5 21 1445.5 22 1601.5 23 1842.5 24 2033.5 25 2367.5 26 2980.0 27 3805.5 28 4962.0 29 6882.5 30 9713.5 31 13987.0 32 21824.0 33 29128.0 34 35422.5 35 44415.5 36 57772.5 37 70381.5 38 79815.0 39 89879.5 40 97155.0 41 102172.5 42 107409.0 43 115685.0 44 124312.0 45 132068.5 46 137216.5 47 140339.0 48 145450.0 49 148426.0 50 147782.5 51 146148.5 52 145160.0 53 143968.5 54 141857.5 55 135236.5 56 124205.5 57 112066.5 58 102171.5 59 91120.0 60 76026.5 61 62736.0 62 51710.5 63 40169.0 64 29329.0 65 21628.0 66 16336.0 67 12635.0 68 9689.5 69 7246.5 70 5650.0 71 4269.0 72 3078.0 73 2360.5 74 1812.5 75 1367.0 76 1023.5 77 674.0 78 432.5 79 308.5 80 203.5 81 154.5 82 137.5 83 117.5 84 96.0 85 78.0 86 69.5 87 54.5 88 43.5 89 43.0 90 33.0 91 28.0 92 25.0 93 22.5 94 24.5 95 24.0 96 17.5 97 11.5 98 11.5 99 11.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05094394126338018 2 0.07057642936488014 3 0.06628921434271524 4 0.06620051334225666 5 0.06232723632223181 6 0.009224904047692755 7 0.012152037062826032 8 0.015581809080557953 9 0.0058246990301136945 10-11 0.012359006063896063 12-13 0.02185001311296457 14-15 0.03734312119306393 16-17 0.02663986713772811 18-19 0.009978862551590719 20-21 0.019469869600659228 22-23 0.03542126618312795 24-25 0.0327011021690647 26-27 0.019854240602646425 28-29 0.011250243558163758 30-31 0.011501563059463081 32-33 0.008337894043106912 34-35 0.005455111528202926 36-37 6.356905032865199E-4 38-39 0.004139380021400595 40-41 0.001419216007337347 42-43 0.2197715121362187 44-45 0.1908697694867967 46-47 0.19712319001912693 48-49 0.2042044865557372 50-51 0.19594051001301244 52-53 0.20358357955252712 54-55 0.1988528595280693 56-57 0.20148432254167398 58-59 0.20997005158554516 60-61 0.21422769960755722 62-63 0.19997640553387802 64-65 0.20025729203533021 66-67 0.19806933402401844 68-69 0.1930872944982613 70-71 0.1855181424591288 72-73 0.19641358201545825 74-75 0.19548222151064307 76-77 0.18952447097984151 78-79 0.20730902157178763 80-81 0.21796792512689417 82-83 0.2168148121209326 84-85 0.21082749458997815 86-87 0.22908511718437008 88-89 0.22274299565158126 90-91 0.22877466368276503 92-93 0.22459093316113513 94-95 0.22773981867741486 96-97 0.23399323920974502 98-99 0.22768068467710914 100-101 0.2340228062098979 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3382149.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.27066792281276 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1204956470508 43.17771972873686 2 11.654284409473343 12.882801669480306 3 3.9803235935535213 6.599854306939003 4 1.8807589524676969 4.158032140187971 5 1.0762247511393013 2.974183041526607 6 0.6580482770367864 2.1822460678367595 7 0.4848720879167564 1.8759442909401545 8 0.3195407541585097 1.4128984728720115 9 0.25473074545585717 1.2671224597639106 >10 1.4289240480769902 14.470758668661155 >50 0.09676179971444097 3.706587386966065 >100 0.04277927334997189 4.167370882971887 >500 0.001557479944434077 0.5719767217493094 >1k 6.981806616746606E-4 0.5525041613679595 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.956700015286139E-5 2 0.0 0.0 0.0 0.0 2.956700015286139E-5 3 0.0 0.0 0.0 0.0 2.956700015286139E-5 4 0.0 0.0 0.0 5.913400030572278E-5 2.956700015286139E-5 5 0.0 2.956700015286139E-5 0.0 5.913400030572278E-5 2.956700015286139E-5 6 2.956700015286139E-5 2.956700015286139E-5 0.0 5.913400030572278E-5 5.913400030572278E-5 7 2.956700015286139E-5 2.956700015286139E-5 0.0 5.913400030572278E-5 5.913400030572278E-5 8 2.956700015286139E-5 2.956700015286139E-5 0.0 5.913400030572278E-5 8.870100045858417E-5 9 2.956700015286139E-5 2.956700015286139E-5 0.0 5.913400030572278E-5 1.1826800061144556E-4 10-11 2.956700015286139E-5 2.956700015286139E-5 0.0 8.870100045858417E-5 1.1826800061144556E-4 12-13 2.956700015286139E-5 2.956700015286139E-5 0.0 1.4783500076430696E-4 1.4783500076430696E-4 14-15 2.956700015286139E-5 2.956700015286139E-5 0.0 1.4783500076430696E-4 2.513195012993218E-4 16-17 2.956700015286139E-5 2.956700015286139E-5 0.0 1.4783500076430696E-4 4.139380021400595E-4 18-19 2.956700015286139E-5 2.956700015286139E-5 0.0 1.7740200091716837E-4 4.2872150221649015E-4 20-21 2.956700015286139E-5 2.956700015286139E-5 0.0 2.808865014521832E-4 4.4350500229292086E-4 22-23 2.956700015286139E-5 2.956700015286139E-5 0.0 3.9915450206362877E-4 4.7307200244578224E-4 24-25 2.956700015286139E-5 2.956700015286139E-5 0.0 6.061235031336585E-4 5.026390025986437E-4 26-27 2.956700015286139E-5 2.956700015286139E-5 0.0 0.0011235460058087328 5.32206002751505E-4 28-29 2.956700015286139E-5 2.956700015286139E-5 0.0 0.006977812036075288 5.32206002751505E-4 30-31 2.956700015286139E-5 2.956700015286139E-5 0.0 0.028088650145218323 5.469895028279357E-4 32-33 2.956700015286139E-5 2.956700015286139E-5 0.0 0.06757537884936471 5.617730029043664E-4 34-35 2.956700015286139E-5 4.4350500229292085E-5 0.0 0.11927327861664284 5.617730029043664E-4 36-37 2.956700015286139E-5 5.913400030572278E-5 0.0 0.20685073306941829 5.617730029043664E-4 38-39 2.956700015286139E-5 5.913400030572278E-5 0.0 0.35428657933166163 6.061235031336585E-4 40-41 2.956700015286139E-5 5.913400030572278E-5 0.0 0.5211775116944878 6.80041003515812E-4 42-43 5.913400030572278E-5 5.913400030572278E-5 0.0 0.6930948340833003 7.096080036686735E-4 44-45 5.913400030572278E-5 5.913400030572278E-5 0.0 0.8959688056321586 7.687420039743961E-4 46-47 5.913400030572278E-5 5.913400030572278E-5 0.0 1.1384329903856987 7.983090041272575E-4 48-49 5.913400030572278E-5 5.913400030572278E-5 0.0 1.3872540801721036 9.165770047387032E-4 50-51 5.913400030572278E-5 5.913400030572278E-5 0.0 1.6603792440841607 9.165770047387032E-4 52-53 5.913400030572278E-5 5.913400030572278E-5 0.0 1.9352045105050073 9.461440048915645E-4 54-55 5.913400030572278E-5 8.870100045858417E-5 0.0 2.2376453550686266 0.0010052780051972873 56-57 5.913400030572278E-5 8.870100045858417E-5 0.0 2.5839931948592447 0.0010348450053501487 58-59 5.913400030572278E-5 8.870100045858417E-5 0.0 2.951407522258777 0.0010939790056558713 60-61 5.913400030572278E-5 1.0348450053501487E-4 0.0 3.34652612880154 0.0011383295058851636 62-63 5.913400030572278E-5 1.1826800061144556E-4 0.0 3.7436848583548508 0.0011531130059615942 64-65 5.913400030572278E-5 1.4783500076430696E-4 0.0 4.165694651536642 0.001167896506038025 66-67 5.913400030572278E-5 1.7740200091716834E-4 0.0 4.646661043023238 0.0011826800061144557 68-69 5.913400030572278E-5 1.7740200091716834E-4 0.0 5.15998851617714 0.0011826800061144557 70-71 5.913400030572278E-5 1.7740200091716834E-4 0.0 5.7123148625326685 0.0011974635061908863 72-73 5.913400030572278E-5 1.7740200091716834E-4 0.0 6.277739389955912 0.0013009480067259012 74-75 5.913400030572278E-5 1.7740200091716834E-4 0.0 6.852403604926927 0.0013009480067259012 76-77 5.913400030572278E-5 1.7740200091716834E-4 0.0 7.483851243691511 0.0013009480067259012 78-79 8.870100045858417E-5 1.7740200091716834E-4 0.0 8.175911232769462 0.0013009480067259012 80-81 8.870100045858417E-5 2.0696900107002974E-4 0.0 8.904841271038029 0.0013452985069551933 82-83 1.0348450053501487E-4 2.0696900107002974E-4 0.0 9.642020502349245 0.001507917007795931 84-85 1.1826800061144556E-4 2.0696900107002974E-4 0.0 10.388468988208384 0.001507917007795931 86-87 1.1826800061144556E-4 2.0696900107002974E-4 0.0 11.177006098785121 0.001507917007795931 88-89 1.1826800061144556E-4 2.661030013757525E-4 0.0 12.034936958720625 0.0015374840079487922 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2040 0.0 46.069656 1 GTATCAA 3525 0.0 38.915146 1 TCAACGC 3840 0.0 33.869263 4 CAACGCA 3970 0.0 32.757282 5 GTACATG 8630 0.0 31.790474 1 ATCAACG 4235 0.0 30.820976 3 AACGCAG 4410 0.0 29.473282 6 TACATGG 9190 0.0 28.821163 2 ACATGGG 9070 0.0 27.944803 3 TATCAAC 4835 0.0 27.488708 2 CATGGGG 7465 0.0 24.543919 4 GAGTACA 6085 0.0 24.493395 1 ACGCAGA 5475 0.0 23.656631 7 CGCAGAG 5770 0.0 22.200806 8 AGTACAT 6330 0.0 21.59641 2 CCCTATA 690 0.0 18.574087 2 GCAGAGT 6835 0.0 18.464739 9 GTATAGG 1190 0.0 18.34809 1 ATGGGGG 4225 0.0 17.636839 5 AGAGTAC 5485 0.0 17.300419 10-11 >>END_MODULE