##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921662_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3596418 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.508880224712478 31.0 31.0 34.0 27.0 34.0 2 30.549057979356125 31.0 31.0 34.0 26.0 34.0 3 30.614042639092563 33.0 31.0 34.0 26.0 34.0 4 34.0850738151127 37.0 35.0 37.0 30.0 37.0 5 34.09124328707063 37.0 35.0 37.0 30.0 37.0 6 34.138301498880274 37.0 35.0 37.0 30.0 37.0 7 34.04875907083103 37.0 35.0 37.0 30.0 37.0 8 34.01971517215185 37.0 35.0 37.0 30.0 37.0 9 35.58923573399977 39.0 37.0 39.0 30.0 39.0 10-11 35.49221127799939 39.0 36.0 39.0 30.0 39.0 12-13 35.38279185011309 39.0 35.0 39.0 30.0 39.0 14-15 36.533346652141105 40.0 37.0 41.0 29.0 41.0 16-17 36.475602391045754 40.0 37.0 41.0 29.0 41.0 18-19 36.43961436073337 40.0 37.0 41.0 29.0 41.0 20-21 36.36251194938964 40.0 37.0 41.0 28.0 41.0 22-23 36.265239051745375 40.0 36.5 41.0 28.0 41.0 24-25 36.157054185581316 40.0 36.0 41.0 27.0 41.0 26-27 36.010086702936086 40.0 36.0 41.0 27.0 41.0 28-29 35.874975044613834 40.0 36.0 41.0 27.0 41.0 30-31 35.72933652317389 40.0 36.0 41.0 27.0 41.0 32-33 35.55228229866495 39.5 35.5 41.0 26.0 41.0 34-35 35.38142229295927 39.0 35.0 41.0 25.0 41.0 36-37 35.35174846194185 39.0 35.0 41.0 25.0 41.0 38-39 35.53231965805977 40.0 35.0 41.0 25.5 41.0 40-41 35.59307149502644 40.0 35.0 41.0 26.0 41.0 42-43 35.43132069186619 40.0 35.0 41.0 25.0 41.0 44-45 35.31156180955607 40.0 35.0 41.0 24.0 41.0 46-47 35.15756372034619 40.0 35.0 41.0 24.0 41.0 48-49 34.99462868331768 39.5 35.0 41.0 23.0 41.0 50-51 33.2833002170493 37.0 32.5 39.5 20.0 40.0 52-53 33.40240455920308 37.5 33.5 39.5 21.0 40.0 54-55 34.32505301107936 39.0 34.0 40.5 22.0 41.0 56-57 34.341318917878844 39.0 34.0 41.0 22.0 41.0 58-59 34.1536038080112 38.0 34.0 41.0 21.0 41.0 60-61 33.90383612249744 38.0 34.0 40.0 20.0 41.0 62-63 33.611466603715144 37.0 34.0 40.0 18.5 41.0 64-65 33.32137838260179 37.0 33.5 40.0 18.0 41.0 66-67 32.98213222156045 36.0 33.0 39.5 16.0 41.0 68-69 32.617883961208065 36.0 33.0 39.0 13.0 41.0 70-71 32.20395126484185 35.0 33.0 39.0 9.0 40.5 72-73 31.838706457369526 35.0 32.0 37.5 7.0 40.0 74-75 31.433238711406737 35.0 32.0 37.0 2.0 39.0 76-77 31.043079808854255 35.0 32.0 36.5 2.0 39.0 78-79 30.686786686085988 35.0 31.5 36.0 2.0 38.5 80-81 30.353600165498 35.0 31.0 36.0 2.0 37.0 82-83 30.020947926520222 35.0 31.0 35.0 2.0 37.0 84-85 29.735543671508708 35.0 31.0 35.0 2.0 36.5 86-87 29.472214436697847 35.0 31.0 35.0 2.0 36.0 88-89 29.218446103873355 35.0 30.5 35.0 2.0 36.0 90-91 28.96394231704991 34.5 30.0 35.0 2.0 35.5 92-93 28.736396047400497 34.0 30.0 35.0 2.0 35.0 94-95 28.46990741899301 34.0 30.0 35.0 2.0 35.0 96-97 28.19263778570789 34.0 29.5 35.0 2.0 35.0 98-99 27.882765295913877 34.0 29.0 35.0 2.0 35.0 100-101 26.77443278284115 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 109329.0 3 19706.0 4 13681.0 5 10694.0 6 9880.0 7 10102.0 8 10810.0 9 11612.0 10 12655.0 11 13393.0 12 13557.0 13 13916.0 14 14598.0 15 15557.0 16 15585.0 17 16062.0 18 15575.0 19 15215.0 20 15798.0 21 16297.0 22 17938.0 23 20619.0 24 23952.0 25 28509.0 26 33685.0 27 40450.0 28 47848.0 29 56639.0 30 67132.0 31 81232.0 32 100445.0 33 128551.0 34 176809.0 35 254044.0 36 422387.0 37 760657.0 38 815203.0 39 146275.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.64390767465682 17.394351268296674 11.451142382291197 25.510598674755308 2 16.613005416767184 19.49398985653511 37.90412541901548 25.98887930768223 3 19.44026617740597 23.030283300417306 29.30992650516389 28.219524017012827 4 13.454693682213033 14.940400336117618 36.1041241186651 35.50078186300424 5 14.231554697368495 36.93339714090158 34.545983183737974 14.289064977991952 6 34.40338309138401 34.78583571027928 16.66704208369241 14.143739114644296 7 29.413286064132677 31.398486814551628 20.857052753473578 18.331174367842113 8 26.96676023153063 34.359237349484374 20.002096935720576 18.67190548326442 9 26.83622354746371 14.770457805246599 19.10669664681029 39.2866220004794 10-11 25.841594882875075 24.770020958443105 28.080197990753703 21.308186167928117 12-13 26.24592867169081 22.294539587731684 27.6106493238487 23.848882416728802 14-15 23.27346118347521 23.963876428466914 24.731594814708906 28.031067573348974 16-17 23.7678522805055 26.986568148435964 25.677134367745087 23.56844520331345 18-19 23.723284382974086 26.427924285266176 26.808316629699913 23.04047470205983 20-21 24.15339892634379 25.77834512881163 26.695298425948522 23.372957518896058 22-23 24.023896386682637 25.639867700337177 26.380962222607636 23.955273690372557 24-25 23.813522561314564 25.72024768234154 26.489961043561365 23.976268712782527 26-27 23.664264167299727 25.94234863676899 26.460825159871128 23.932562036060155 28-29 23.807223635366064 26.169444891700532 26.28041538364422 23.742916089289185 30-31 23.995242481073372 25.931703963746305 26.096581972373688 23.976471582806635 32-33 23.74933973803085 26.031569385868426 26.03700581503266 24.18208506106806 34-35 24.137557558612496 25.987900369429003 26.10126923353388 23.77327283842462 36-37 24.184233711124367 25.77744312106437 26.15375118678085 23.884571981030415 38-39 23.879914299975113 25.954149652486674 26.229032065212106 23.936903982326108 40-41 24.135257364119717 25.739512317060502 26.287633917889785 23.837596400929993 42-43 23.907844378867757 25.749666387587943 26.1416818747847 24.200807358759597 44-45 23.778241838460445 25.80631859329245 26.383637635166572 24.03180193308053 46-47 23.92704986778642 25.78805703156129 26.18096403066129 24.103929069991 48-49 23.704848473279945 25.889320546075524 26.203020126513653 24.20281085413088 50-51 23.777926476572762 25.985992127694463 26.263471880951055 23.972609514781716 52-53 23.975027910940796 25.74643392710873 26.28373956587811 23.994798596072364 54-55 23.412458744874503 25.644627662783332 26.576792526408227 24.36612106593394 56-57 23.541751887300332 25.794572109752657 26.429881484338164 24.233794518608843 58-59 23.584695600800362 25.58993194700673 26.476613402148047 24.348759050044865 60-61 23.493987739567604 25.670268137911123 26.631304554541757 24.204439567979517 62-63 23.602891972620636 25.638343478662485 26.5986887119693 24.16007583674758 64-65 23.430171044319714 25.479690663994592 26.51037877303851 24.579759518647183 66-67 23.390954287995175 25.567138571023545 26.44516906984245 24.596738071138834 68-69 23.63667266184545 25.476769959278293 26.47059970827488 24.41595767060138 70-71 23.46152694224984 25.394217113515943 26.422175927183524 24.72208001705069 72-73 23.535947455634624 25.564652144631868 26.328648599246957 24.570751800486555 74-75 23.556583659244186 25.696742414701262 26.281710131972996 24.464963794081555 76-77 23.55687112382596 25.426113587475825 26.42175197529112 24.5952633134071 78-79 23.524717015334726 25.49225795421723 26.432918363004827 24.550106667443224 80-81 23.709405687419093 25.598959893759783 26.25154852365949 24.44008589516164 82-83 23.670907207432926 25.609221817525107 26.297851005380778 24.42201996966119 84-85 23.611658602347187 25.627104473868467 26.3273869863133 24.433849937471045 86-87 23.653711074689767 25.72167218561506 26.22187566199507 24.402741077700103 88-89 23.604144987896124 25.48747533201529 26.24410187632067 24.664277803767913 90-91 23.68911915943076 25.468090099853274 26.290826008232653 24.55196473248331 92-93 23.841989895610084 25.30240633204347 26.386441002980476 24.46916276936597 94-95 23.80692300595448 25.198531434596745 26.40266698701877 24.591878572430005 96-97 23.890279145385986 25.007794495699265 26.369479305387433 24.732447053527316 98-99 23.814633832262018 25.04781239229756 26.29792370949744 24.839630065942984 100-101 24.12799226198316 24.935787143212547 26.348393337110355 24.587827257693938 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 55.0 1 44.5 2 95.0 3 173.5 4 164.5 5 170.5 6 276.5 7 464.0 8 732.5 9 820.5 10 685.0 11 632.5 12 698.5 13 784.0 14 857.5 15 975.5 16 1096.0 17 1229.0 18 1371.5 19 1482.5 20 1640.0 21 1788.5 22 1957.5 23 2184.5 24 2424.0 25 2864.5 26 3523.0 27 4510.5 28 6147.0 29 8568.5 30 12462.5 31 18353.0 32 26983.0 33 33958.0 34 39564.5 35 47917.0 36 58870.5 37 69619.0 38 79676.5 39 90395.0 40 99670.0 41 108070.0 42 116836.0 43 125918.0 44 134684.5 45 144147.5 46 150207.0 47 154476.0 48 159807.5 49 162300.5 50 161793.5 51 160545.5 52 158491.5 53 155917.0 54 151790.5 55 142713.0 56 130442.0 57 116929.5 58 104954.5 59 91565.0 60 75019.5 61 61283.0 62 50736.0 63 39193.0 64 28205.5 65 20878.0 66 15731.0 67 11972.5 68 9166.0 69 6919.0 70 5271.5 71 3892.0 72 2762.5 73 2061.0 74 1547.0 75 1150.0 76 854.0 77 569.5 78 367.5 79 278.0 80 206.5 81 149.5 82 124.0 83 98.5 84 72.5 85 61.0 86 57.5 87 52.0 88 47.0 89 43.5 90 36.0 91 32.0 92 24.0 93 23.0 94 24.0 95 16.0 96 11.5 97 8.5 98 8.0 99 9.5 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05316400930036497 2 0.07165462968987475 3 0.06740039672807777 4 0.0677896729468043 5 0.06334080187564405 6 0.011594870229211398 7 0.015571048749060871 8 0.01932478371535233 9 0.007229415490635404 10-11 0.013694181265915142 12-13 0.023551211232954568 14-15 0.0411520574082323 16-17 0.02805569319250432 18-19 0.010955345012732112 20-21 0.021146040310108558 22-23 0.0388581082621653 24-25 0.03471509707714732 26-27 0.02189678730336685 28-29 0.011594870229211398 30-31 0.011845119226964162 32-33 0.008550174089886103 34-35 0.005352548007489675 36-37 8.202606037451709E-4 38-39 0.0042542329617969886 40-41 0.0012373422666664444 42-43 0.2341774510081976 44-45 0.2037582950591394 46-47 0.2093193838980897 48-49 0.21670172933179627 50-51 0.20874937229209733 52-53 0.21609000955951171 54-55 0.21191919293029898 56-57 0.21393508763441846 58-59 0.223500160437413 60-61 0.22824098867261816 62-63 0.21289238347711528 64-65 0.21407411485539224 66-67 0.21105722416026165 68-69 0.20639981225764079 70-71 0.19798866538872842 72-73 0.20929157845389498 74-75 0.20859644234902616 76-77 0.2019648439085779 78-79 0.22045546429808768 80-81 0.2314247120329172 82-83 0.23009005071156913 84-85 0.22468189181568993 86-87 0.24407618914152915 88-89 0.23686067637299113 90-91 0.2434088584808551 92-93 0.23833436491531296 94-95 0.24187955905014377 96-97 0.2488726282651238 98-99 0.24183785088385165 100-101 0.2484555466022025 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3596418.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.63338609650546 #Duplication Level Percentage of deduplicated Percentage of total 1 78.93641739664754 47.07245855689193 2 11.666553305843909 13.914321554057038 3 3.794927988061575 6.7891321776153175 4 1.7367461261017532 4.14272209157744 5 0.9688439589356713 2.8887722935238878 6 0.6039858183840621 2.1610631702706358 7 0.4203243497868666 1.7545754965621978 8 0.3158462832316739 1.50679866840805 9 0.24136190287798648 1.2953904788979196 >10 1.2341246396605257 13.08124099497471 >50 0.061575433864498264 2.479265770965537 >100 0.017374007206920165 1.7133658778623229 >500 0.0011231938066174987 0.4500766804008929 >1k 7.955955902744026E-4 0.7508161879921585 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.5610888389503114E-5 2 0.0 0.0 0.0 2.7805444194751557E-5 5.5610888389503114E-5 3 0.0 0.0 0.0 2.7805444194751557E-5 5.5610888389503114E-5 4 0.0 0.0 0.0 5.5610888389503114E-5 8.341633258425467E-5 5 0.0 0.0 0.0 5.5610888389503114E-5 8.341633258425467E-5 6 0.0 0.0 0.0 5.5610888389503114E-5 8.341633258425467E-5 7 0.0 2.7805444194751557E-5 0.0 5.5610888389503114E-5 8.341633258425467E-5 8 0.0 2.7805444194751557E-5 0.0 5.5610888389503114E-5 8.341633258425467E-5 9 0.0 2.7805444194751557E-5 0.0 5.5610888389503114E-5 8.341633258425467E-5 10-11 0.0 2.7805444194751557E-5 0.0 9.731905468163045E-5 8.341633258425467E-5 12-13 0.0 4.1708166292127334E-5 0.0 1.6683266516850933E-4 1.5292994307113355E-4 14-15 0.0 5.5610888389503114E-5 0.0 1.6683266516850933E-4 1.6683266516850933E-4 16-17 0.0 5.5610888389503114E-5 0.0 2.2244355355801243E-4 1.8073538726588511E-4 18-19 0.0 5.5610888389503114E-5 0.0 2.7805444194751555E-4 1.946381093632609E-4 20-21 0.0 5.5610888389503114E-5 0.0 3.197626082396429E-4 2.641517198501398E-4 22-23 0.0 5.5610888389503114E-5 0.0 5.283034397002796E-4 3.3366533033701867E-4 24-25 0.0 5.5610888389503114E-5 0.0 7.090388269661647E-4 3.6147077453177023E-4 26-27 0.0 5.5610888389503114E-5 0.0 0.0012095368224716925 3.892762187265218E-4 28-29 0.0 5.5610888389503114E-5 0.0 0.006214516777526972 3.892762187265218E-4 30-31 0.0 5.5610888389503114E-5 0.0 0.027583000641193546 3.892762187265218E-4 32-33 0.0 5.5610888389503114E-5 0.0 0.07636765248088515 4.448871071160249E-4 34-35 0.0 6.951361048687889E-5 0.0 0.14399049276252093 4.448871071160249E-4 36-37 0.0 8.341633258425467E-5 0.0 0.2570613315804781 4.448871071160249E-4 38-39 0.0 8.341633258425467E-5 0.0 0.43254148989355523 4.448871071160249E-4 40-41 0.0 8.341633258425467E-5 0.0 0.623328545235843 4.448871071160249E-4 42-43 0.0 8.341633258425467E-5 0.0 0.8258216925841212 4.448871071160249E-4 44-45 0.0 8.341633258425467E-5 0.0 1.074179920131642 4.448871071160249E-4 46-47 0.0 8.341633258425467E-5 0.0 1.3609513688342123 4.5878982921340066E-4 48-49 0.0 8.341633258425467E-5 0.0 1.6504060429015759 4.865952734081522E-4 50-51 0.0 8.341633258425467E-5 0.0 1.9581288938048913 5.561088838950311E-4 52-53 0.0 8.341633258425467E-5 0.0 2.2690632735127005 6.395252164792858E-4 54-55 0.0 1.1122177677900623E-4 0.0 2.6237078114946595 6.673306606740373E-4 56-57 0.0 1.1122177677900623E-4 0.0 3.02936143685189 6.673306606740373E-4 58-59 0.0 1.1122177677900623E-4 0.0 3.4504470837372074 6.673306606740373E-4 60-61 0.0 1.3902722097375777E-4 0.0 3.8830163790749577 6.673306606740373E-4 62-63 0.0 1.3902722097375777E-4 0.0 4.319992837317575 6.673306606740373E-4 64-65 0.0 1.3902722097375777E-4 0.0 4.801499714438088 6.951361048687888E-4 66-67 0.0 1.3902722097375777E-4 0.0 5.35892935693237 6.951361048687888E-4 68-69 0.0 1.3902722097375777E-4 0.0 5.947779151366721 6.951361048687888E-4 70-71 0.0 1.3902722097375777E-4 0.0 6.545888158717924 6.951361048687888E-4 72-73 0.0 1.3902722097375777E-4 0.0 7.15606472884965 7.785524374530435E-4 74-75 0.0 1.3902722097375777E-4 0.0 7.799566123848785 8.619687700372982E-4 76-77 0.0 1.3902722097375777E-4 0.0 8.526887030372999 8.619687700372982E-4 78-79 0.0 1.3902722097375777E-4 0.0 9.308929051072484 8.619687700372982E-4 80-81 0.0 1.3902722097375777E-4 0.0 10.102176665782453 8.75871492134674E-4 82-83 0.0 1.3902722097375777E-4 0.0 10.917418386850471 9.175796584268013E-4 84-85 0.0 1.3902722097375777E-4 0.0 11.758268922021855 9.175796584268013E-4 86-87 0.0 1.3902722097375777E-4 0.0 12.658609205047913 9.314823805241771E-4 88-89 0.0 1.3902722097375777E-4 0.0 13.623736173047739 9.453851026215529E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2355 0.0 47.761906 1 GTATCAA 4105 0.0 38.615135 1 TCAACGC 4540 0.0 33.766735 4 CAACGCA 4715 0.0 32.511654 5 ATCAACG 4865 0.0 31.510553 3 GTACATG 8130 0.0 31.464619 1 AACGCAG 5140 0.0 29.992655 6 TATCAAC 5395 0.0 28.944023 2 TACATGG 8745 0.0 28.385489 2 ACATGGG 9160 0.0 26.476572 3 TAAGGCG 1430 0.0 25.222944 5 CATGGGG 7550 0.0 24.265137 4 ACGCAGA 6415 0.0 23.51687 7 GTATTAA 2255 0.0 23.361498 1 CGCAGAG 6825 0.0 21.96542 8 GAGTACA 6185 0.0 21.33189 1 TATTAAG 2140 0.0 20.626411 2 AGTACAT 6680 0.0 18.331488 2 ATGGGGG 4615 0.0 18.304863 5 GTATAGT 795 0.0 17.90929 1 >>END_MODULE