##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921660_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2764286 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.63932964968169 31.0 31.0 34.0 27.0 34.0 2 30.69472695661737 33.0 31.0 34.0 27.0 34.0 3 30.750814857796914 33.0 31.0 34.0 27.0 34.0 4 34.22613615233735 37.0 35.0 37.0 30.0 37.0 5 34.231978890751535 37.0 35.0 37.0 30.0 37.0 6 34.28354591384539 37.0 35.0 37.0 30.0 37.0 7 34.19756928190498 37.0 35.0 37.0 30.0 37.0 8 34.17255088655805 37.0 35.0 37.0 30.0 37.0 9 35.75902891379546 39.0 37.0 39.0 30.0 39.0 10-11 35.662342282962044 39.0 37.0 39.0 30.0 39.0 12-13 35.55969154421793 39.0 37.0 39.0 30.0 39.0 14-15 36.731847030300045 40.0 37.0 41.0 30.0 41.0 16-17 36.67085117097145 40.0 37.0 41.0 30.0 41.0 18-19 36.64343758207363 40.0 37.0 41.0 30.0 41.0 20-21 36.57144684016053 40.0 37.0 41.0 29.5 41.0 22-23 36.47286930512979 40.0 37.0 41.0 29.0 41.0 24-25 36.36479293387153 40.0 37.0 41.0 29.0 41.0 26-27 36.22231183748715 40.0 36.0 41.0 28.0 41.0 28-29 36.087544667954035 40.0 36.0 41.0 27.0 41.0 30-31 35.93700905043834 40.0 36.0 41.0 27.0 41.0 32-33 35.75635299675938 40.0 36.0 41.0 27.0 41.0 34-35 35.58394590863608 39.5 35.0 41.0 26.0 41.0 36-37 35.54257410412671 39.5 35.0 41.0 25.5 41.0 38-39 35.709403621767066 40.0 35.5 41.0 26.5 41.0 40-41 35.76373175568664 40.0 36.0 41.0 26.5 41.0 42-43 35.590437639231254 40.0 35.0 41.0 26.0 41.0 44-45 35.46492421551171 40.0 35.0 41.0 25.0 41.0 46-47 35.30010136433061 40.0 35.0 41.0 24.0 41.0 48-49 35.127486085014354 40.0 35.0 41.0 24.0 41.0 50-51 33.4257332634901 37.0 32.5 39.5 21.0 40.0 52-53 33.538906610965725 37.5 33.5 39.5 21.5 40.0 54-55 34.45136031510488 39.0 34.0 40.5 22.0 41.0 56-57 34.46429729051191 39.0 34.0 41.0 22.0 41.0 58-59 34.27411291740435 38.5 34.0 41.0 22.0 41.0 60-61 34.020205036671314 38.0 34.0 40.5 21.0 41.0 62-63 33.730459511063614 37.0 34.0 40.0 20.0 41.0 64-65 33.43560398598409 37.0 34.0 40.0 19.5 41.0 66-67 33.09685719929125 36.0 33.0 39.5 18.0 41.0 68-69 32.73541069918235 36.0 33.0 39.0 15.5 41.0 70-71 32.32982875143889 35.0 33.0 39.0 12.0 41.0 72-73 31.969670830008184 35.0 32.5 37.5 8.0 40.0 74-75 31.577344023013538 35.0 32.0 37.0 6.5 39.0 76-77 31.202623389909725 35.0 32.0 37.0 2.0 39.0 78-79 30.860185414967916 35.0 32.0 36.0 2.0 39.0 80-81 30.542879427092565 35.0 31.5 36.0 2.0 37.0 82-83 30.22803121674096 35.0 31.0 35.0 2.0 37.0 84-85 29.96074845366941 35.0 31.0 35.0 2.0 36.5 86-87 29.7194635432079 35.0 31.0 35.0 2.0 36.0 88-89 29.480469459383002 35.0 31.0 35.0 2.0 36.0 90-91 29.243393954171168 35.0 31.0 35.0 2.0 35.5 92-93 29.042425602850066 34.5 30.5 35.0 2.0 35.0 94-95 28.806794412734426 34.0 30.0 35.0 2.0 35.0 96-97 28.56105156991715 34.0 30.0 35.0 2.0 35.0 98-99 28.278942736026593 34.0 30.0 35.0 2.0 35.0 100-101 27.19489408838304 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 78590.0 3 14354.0 4 9872.0 5 7771.0 6 7182.0 7 7469.0 8 7743.0 9 8432.0 10 9448.0 11 10293.0 12 10411.0 13 10465.0 14 11625.0 15 12378.0 16 12452.0 17 13163.0 18 12341.0 19 11229.0 20 11458.0 21 12025.0 22 13182.0 23 14982.0 24 17928.0 25 20638.0 26 24708.0 27 29213.0 28 34337.0 29 40749.0 30 48781.0 31 59597.0 32 73951.0 33 96149.0 34 132361.0 35 193755.0 36 327730.0 37 594802.0 38 637930.0 39 124776.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.05209520238252 18.16368103524411 12.521409532689443 25.262814229683926 2 16.20215971837064 19.664059094667607 38.71104028220861 25.422740904753148 3 18.923840388313522 23.3560462570376 29.90275509140196 27.81735826324691 4 13.279098551900926 15.48160218020346 36.40328695791314 34.83601230998247 5 14.029711023964953 37.17671785749322 34.72483618464898 14.068734933892845 6 33.95002255782999 35.175743042618926 16.766817160738015 14.107417238813072 7 28.738603990150168 31.771268632145954 21.219824407921255 18.27030296978262 8 26.581580484161943 34.582308471061076 20.161799792024418 18.674311252752567 9 26.670653500708006 14.888256494523711 19.501226078091296 38.939863926676985 10-11 25.636530000206225 24.923107704208245 28.33457130442113 21.105790991164397 12-13 25.991209830602983 22.615879584123274 27.858284073394824 23.534626511878923 14-15 23.092203858713372 24.318196376670244 24.966243224668666 27.623356539947718 16-17 23.438870817133438 27.371083369926154 25.943194559258743 23.246851253681672 18-19 23.563763990979783 26.563442357181387 27.15661974093465 22.716173910904182 20-21 23.932575671092646 25.90562251139361 27.05937521540257 23.102426602111176 22-23 23.873794241164255 25.809974814073065 26.698711064636036 23.617519880126643 24-25 23.6116878612152 26.00098033947104 26.773418361226327 23.613913438087437 26-27 23.443504495538477 26.131817868501273 26.725897981480884 23.698779654479374 28-29 23.582861320095798 26.38147425151282 26.59799342139182 23.437671006999565 30-31 23.78807687291208 26.041072524629023 26.48836481076367 23.682485791695225 32-33 23.514664635828435 26.125093725777145 26.388873563135224 23.971368075259196 34-35 23.998562300695138 26.12105001250842 26.396777874914733 23.483609811881713 36-37 24.061798694806992 25.89548652255002 26.45368181891356 23.589032963729426 38-39 23.762536706144274 26.02461559165945 26.484100365279723 23.728747336916552 40-41 23.927563859418928 25.917701891160206 26.553261809554147 23.60147243986672 42-43 23.81736567382397 25.96658811594471 26.301548118163637 23.91449809206768 44-45 23.70469577288919 25.99099103180867 26.52418928800879 23.780123907293348 46-47 23.96370542629758 26.011908613273466 26.223579837242067 23.800806123186888 48-49 23.655126400255785 26.182007740637005 26.18563282235994 23.977233036747272 50-51 23.768027266858464 26.15083258814408 26.32893493455686 23.7522052104406 52-53 23.998752263606608 26.001456175796704 26.28324812390943 23.716543436687257 54-55 23.44084735256696 25.936542804426704 26.604862417579234 24.017747425427103 56-57 23.536752380897145 26.092501188998575 26.41742767408679 23.95331875601749 58-59 23.62833817041425 25.87114132451366 26.506043314940282 23.99447719013181 60-61 23.462487913624148 25.933184230265987 26.729407661538694 23.874920194571164 62-63 23.57399011621226 25.94077412249937 26.647766179147187 23.83746958214118 64-65 23.32328083304953 25.881838202896418 26.587809003823743 24.207071960230305 66-67 23.33122911527327 25.95861994468861 26.538648287291554 24.171502652746565 68-69 23.598023117993105 25.799053242427206 26.572009032618187 24.030914606961495 70-71 23.456458336127124 25.722474740793444 26.498563114762714 24.322503808316718 72-73 23.42192125029814 25.8709509976562 26.458006949483938 24.249120802561723 74-75 23.473105702113838 26.0164766155373 26.40613610389083 24.10428157845803 76-77 23.563696451457634 25.78534116807878 26.425158173709818 24.22580420675377 78-79 23.502237657537798 25.81305182411232 26.482554609175757 24.202155909174124 80-81 23.600119935594442 25.907955594825076 26.368699710349013 24.12322475923147 82-83 23.540337518567437 25.976428736391888 26.344387567349447 24.13884617769123 84-85 23.5038295532058 25.998091975620934 26.417074262317282 24.08100420885598 86-87 23.611127982532366 26.06329387717287 26.238071728902874 24.08750641139189 88-89 23.410714651532075 25.911450236647205 26.302801459821463 24.37503365199926 90-91 23.425573089981082 25.861670098734034 26.37464904255655 24.33810776872834 92-93 23.604629048981092 25.725965275062123 26.509759216282202 24.159646459674576 94-95 23.553163194913434 25.54833878896714 26.613878008341636 24.28462000777779 96-97 23.602058331479412 25.36078911530584 26.62207105598729 24.41508149722746 98-99 23.502272148347313 25.463055040108202 26.47576329771081 24.55890951383368 100-101 23.690510186597912 25.359855747656308 26.550209552094294 24.399424513651482 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 42.5 2 67.5 3 105.0 4 100.0 5 109.0 6 188.5 7 336.5 8 510.0 9 601.0 10 548.5 11 515.0 12 594.5 13 669.0 14 720.5 15 814.5 16 925.5 17 993.0 18 1128.0 19 1306.0 20 1422.5 21 1587.5 22 1826.5 23 2140.5 24 2540.0 25 3280.0 26 4647.5 27 6860.5 28 9904.5 29 13925.5 30 18973.0 31 25439.0 32 33864.5 33 38566.0 34 40606.5 35 44458.0 36 50165.0 37 56467.5 38 61916.5 39 67381.0 40 72759.5 41 78445.5 42 84430.0 43 90742.0 44 96408.0 45 103290.5 46 108275.0 47 111277.0 48 115079.0 49 116386.0 50 115961.5 51 115460.5 52 114428.0 53 113432.5 54 111868.0 55 106814.0 56 98706.5 57 89322.0 58 80948.5 59 71241.5 60 58738.0 61 48498.5 62 40781.5 63 31656.0 64 22689.0 65 16812.0 66 12778.5 67 10042.5 68 7810.0 69 5856.0 70 4539.0 71 3342.5 72 2311.0 73 1714.5 74 1347.5 75 1027.0 76 758.0 77 528.0 78 333.0 79 222.5 80 167.5 81 140.5 82 112.0 83 91.0 84 63.5 85 52.0 86 50.5 87 43.5 88 36.5 89 30.0 90 27.5 91 23.0 92 22.5 93 21.0 94 16.0 95 14.5 96 9.0 97 8.5 98 9.0 99 8.0 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0541912088691257 2 0.07502841601773477 3 0.07170025098705417 4 0.0714470210390676 5 0.06790180176725563 6 0.010093022212607524 7 0.013746768604985157 8 0.018087853427612047 9 0.006801032888782131 10-11 0.012842375933604554 12-13 0.022808783172218794 14-15 0.041131778694389796 16-17 0.02769250359767405 18-19 0.009875967971476178 20-21 0.02045736222662923 22-23 0.03749612015543978 24-25 0.03463823931387707 26-27 0.021759687673417294 28-29 0.011847543995085892 30-31 0.011630489753954547 32-33 0.008627906084970948 34-35 0.005335916761145555 36-37 7.41601990532094E-4 38-39 0.003726097806088082 40-41 0.001103359059084335 42-43 0.22412659182154093 44-45 0.19420928225227058 46-47 0.19992504393539595 48-49 0.20719636101329603 50-51 0.19820669785977282 52-53 0.20585785985965271 54-55 0.20171574142472956 56-57 0.20482685221427885 58-59 0.21370798824723636 60-61 0.21759687673417297 62-63 0.203560702474346 64-65 0.202674397656393 66-67 0.20046767953822436 68-69 0.19520411419078923 70-71 0.18786044569917873 72-73 0.19968990184083701 74-75 0.19777258937751013 76-77 0.19151419209155637 78-79 0.21057878960425946 80-81 0.22208266438422075 82-83 0.22056328469630132 84-85 0.21472090803918262 86-87 0.23512400670552902 88-89 0.22709299978366926 90-91 0.23416535047386558 92-93 0.22987852921152155 94-95 0.23273641005308426 96-97 0.23932038870073505 98-99 0.23273641005308426 100-101 0.2394289158213007 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2764286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.97333669902155 #Duplication Level Percentage of deduplicated Percentage of total 1 79.6246849465646 48.549827248003965 2 11.262182157888741 13.733856493573269 3 3.7132639563738747 6.792302803929753 4 1.67602615633608 4.087716285865869 5 0.966549518471139 2.946687461300896 6 0.5813530586535417 2.1268221471773057 7 0.404513808223398 1.726518963974608 8 0.29293323750778094 1.4288893536717102 9 0.23225049479723142 1.2744978856007352 >10 1.1851857417309106 12.467065231065003 >50 0.04456455887924891 1.8342570129104416 >100 0.01423079503874089 1.600785050826492 >500 0.001190299755192587 0.5013225035362577 >1k 0.0010712697795038635 0.929451558563662 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 3.61757068552241E-5 7 0.0 0.0 0.0 3.61757068552241E-5 3.61757068552241E-5 8 0.0 0.0 0.0 3.61757068552241E-5 7.23514137104482E-5 9 0.0 0.0 0.0 3.61757068552241E-5 7.23514137104482E-5 10-11 0.0 0.0 0.0 3.61757068552241E-5 7.23514137104482E-5 12-13 0.0 0.0 0.0 7.23514137104482E-5 9.043926713806024E-5 14-15 0.0 0.0 0.0 7.23514137104482E-5 1.2661497399328435E-4 16-17 0.0 0.0 0.0 9.043926713806024E-5 1.8087853427612048E-4 18-19 0.0 0.0 0.0 1.0852712056567229E-4 1.8087853427612048E-4 20-21 0.0 0.0 0.0 1.0852712056567229E-4 2.1705424113134457E-4 22-23 0.0 0.0 0.0 1.2661497399328435E-4 2.1705424113134457E-4 24-25 0.0 0.0 0.0 2.532299479865687E-4 2.7131780141418076E-4 26-27 0.0 0.0 0.0 4.341084822626892E-4 2.894056548417928E-4 28-29 0.0 0.0 0.0 0.003129198642976884 2.894056548417928E-4 30-31 0.0 0.0 0.0 0.015410851120325465 3.4366921512462895E-4 32-33 3.61757068552241E-5 0.0 0.0 0.043935395975669665 4.702841891179133E-4 34-35 3.61757068552241E-5 0.0 0.0 0.0837648492232714 5.064598959731374E-4 36-37 7.23514137104482E-5 0.0 0.0 0.14519119946344192 5.064598959731374E-4 38-39 7.23514137104482E-5 0.0 0.0 0.24456586619474252 5.064598959731374E-4 40-41 7.23514137104482E-5 0.0 0.0 0.35602321901568795 5.064598959731374E-4 42-43 7.23514137104482E-5 3.61757068552241E-5 0.0 0.4727984007443513 5.064598959731374E-4 44-45 7.23514137104482E-5 3.61757068552241E-5 0.0 0.6215167316261776 5.064598959731374E-4 46-47 7.23514137104482E-5 3.61757068552241E-5 0.0 0.796570977098607 5.064598959731374E-4 48-49 7.23514137104482E-5 3.61757068552241E-5 0.0 0.9742660491714678 5.426356028283614E-4 50-51 7.23514137104482E-5 3.61757068552241E-5 0.0 1.1609688722512792 5.426356028283614E-4 52-53 7.23514137104482E-5 3.61757068552241E-5 0.0 1.3518499894728693 6.149870165388096E-4 54-55 7.23514137104482E-5 3.61757068552241E-5 0.0 1.57514454003674 6.511627233940337E-4 56-57 7.23514137104482E-5 3.61757068552241E-5 0.0 1.8352478723258012 7.235141371044819E-4 58-59 7.23514137104482E-5 3.61757068552241E-5 0.0 2.101410635513113 7.235141371044819E-4 60-61 7.23514137104482E-5 3.61757068552241E-5 0.0 2.382929986260467 7.596898439597061E-4 62-63 7.23514137104482E-5 3.61757068552241E-5 0.0 2.669839517329249 8.320412576701543E-4 64-65 7.23514137104482E-5 3.61757068552241E-5 0.0 2.9852012418396647 8.320412576701543E-4 66-67 7.23514137104482E-5 3.61757068552241E-5 0.0 3.355097844434331 8.320412576701543E-4 68-69 7.23514137104482E-5 3.61757068552241E-5 0.0 3.7563045213121944 8.320412576701543E-4 70-71 7.23514137104482E-5 3.61757068552241E-5 0.0 4.170950473286773 9.224805248082145E-4 72-73 7.23514137104482E-5 3.61757068552241E-5 0.0 4.60636128099625 0.0010129197919462748 74-75 7.23514137104482E-5 3.61757068552241E-5 0.0 5.058539528833124 0.001049095498801499 76-77 7.23514137104482E-5 3.61757068552241E-5 0.0 5.571022679997656 0.001049095498801499 78-79 7.23514137104482E-5 3.61757068552241E-5 0.0 6.142761638991045 0.001049095498801499 80-81 7.23514137104482E-5 3.61757068552241E-5 0.0 6.725715067109554 0.001049095498801499 82-83 7.23514137104482E-5 3.61757068552241E-5 0.0 7.330301567927487 0.0010852712056567228 84-85 7.23514137104482E-5 3.61757068552241E-5 0.0 7.95836610249446 0.001103359059084335 86-87 7.23514137104482E-5 3.61757068552241E-5 0.0 8.637474559434153 0.001139534765939559 88-89 7.23514137104482E-5 3.61757068552241E-5 0.0 9.371117894458099 0.0011937983262223953 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2125 0.0 45.565933 1 GTATCAA 3645 0.0 40.10719 1 TCAACGC 4335 0.0 32.079815 4 CAACGCA 4375 0.0 31.568398 5 ATCAACG 4475 0.0 31.289457 3 TATCAAC 4765 0.0 29.685612 2 AACGCAG 4745 0.0 29.389305 6 GTACATG 6715 0.0 27.849617 1 TACATGG 7090 0.0 25.976349 2 ACATGGG 7295 0.0 24.334105 3 ACGCAGA 5565 0.0 24.296535 7 CGCAGAG 5830 0.0 23.031061 8 CATGGGG 6100 0.0 22.253048 4 GAGTACA 5115 0.0 22.08515 1 GCAGAGT 6590 0.0 19.655369 9 AGAGTAC 5520 0.0 19.039103 10-11 CGTATAC 200 1.2941129E-5 18.985806 3 AGTACAT 5750 0.0 17.666014 2 ATAGGAC 815 0.0 16.889212 3 GTATATG 965 0.0 16.723248 1 >>END_MODULE