##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921660_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2764286 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.431637319727407 33.0 31.0 34.0 29.0 34.0 2 31.56176350782806 34.0 31.0 34.0 29.0 34.0 3 31.632108978593386 34.0 31.0 34.0 28.0 34.0 4 35.12051321751802 37.0 35.0 37.0 32.0 37.0 5 34.869637584533585 37.0 35.0 37.0 32.0 37.0 6 34.853750299353976 37.0 35.0 37.0 32.0 37.0 7 34.73602405829209 37.0 35.0 37.0 32.0 37.0 8 34.68466323672732 37.0 35.0 37.0 32.0 37.0 9 36.2867655517555 39.0 37.0 39.0 32.0 39.0 10-11 36.17219292793872 39.0 37.0 39.0 32.0 39.0 12-13 36.09957526102581 39.0 37.0 39.0 32.0 39.0 14-15 37.34796562294929 40.0 38.0 41.0 32.0 41.0 16-17 37.31132107893322 40.0 38.0 41.0 31.5 41.0 18-19 37.275008266149015 40.0 38.0 41.0 31.0 41.0 20-21 37.21431809154335 40.0 38.0 41.0 31.0 41.0 22-23 37.12845179550886 40.0 38.0 41.0 31.0 41.0 24-25 37.038483536074054 40.0 37.5 41.0 31.0 41.0 26-27 36.90647783912374 40.0 37.0 41.0 30.0 41.0 28-29 36.78229079769604 40.0 37.0 41.0 30.0 41.0 30-31 36.619571563868575 40.0 37.0 41.0 30.0 41.0 32-33 36.5585156528666 40.0 37.0 41.0 30.0 41.0 34-35 36.67697626077765 40.0 37.0 41.0 30.0 41.0 36-37 36.6661716624112 40.0 37.0 41.0 30.0 41.0 38-39 36.55104681642927 40.0 37.0 41.0 30.0 41.0 40-41 36.46024145113783 40.0 37.0 41.0 30.0 41.0 42-43 36.32222733103593 40.0 36.5 41.0 29.0 41.0 44-45 36.17914246210414 40.0 36.0 41.0 28.5 41.0 46-47 36.011480903206106 40.0 36.0 41.0 28.0 41.0 48-49 35.85681546699582 40.0 35.5 41.0 28.0 41.0 50-51 35.69315801621106 39.5 35.0 41.0 27.0 41.0 52-53 35.50935304812889 39.0 35.0 41.0 27.0 41.0 54-55 35.28730529330178 39.0 35.0 41.0 26.0 41.0 56-57 35.05718022664804 39.0 35.0 41.0 26.0 41.0 58-59 34.812857461203365 38.5 35.0 40.5 26.0 41.0 60-61 34.531097542005426 38.0 34.0 40.0 26.0 41.0 62-63 34.224380726162195 37.0 34.0 40.0 25.0 41.0 64-65 33.88704515379378 37.0 34.0 40.0 24.0 41.0 66-67 33.537618574923144 36.0 34.0 39.0 23.0 41.0 68-69 33.17922222953776 36.0 33.5 39.0 22.5 41.0 70-71 32.78084901489933 35.0 33.0 38.5 22.0 40.0 72-73 32.41844946579334 35.0 33.0 37.5 21.0 40.0 74-75 32.0249469483259 35.0 33.0 37.0 20.0 39.0 76-77 29.321675108870792 33.0 29.0 34.5 13.0 36.5 78-79 30.89255959766826 34.5 31.5 36.0 16.0 37.5 80-81 31.08283368652882 35.0 32.0 35.5 18.0 37.0 82-83 30.90415011326614 35.0 32.0 35.0 16.0 37.0 84-85 30.701580986916696 35.0 32.0 35.0 13.0 36.5 86-87 30.488748450775354 35.0 32.0 35.0 8.5 36.0 88-89 30.21173442255975 35.0 32.0 35.0 2.0 36.0 90-91 30.00849586475495 34.5 31.0 35.0 2.0 35.0 92-93 29.844454951477523 34.0 31.0 35.0 2.0 35.0 94-95 29.73390542802011 34.0 31.0 35.0 2.0 35.0 96-97 29.524083072446196 34.0 31.0 35.0 2.0 35.0 98-99 29.312976479278916 34.0 31.0 35.0 2.0 35.0 100-101 28.184149903447036 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 47585.0 3 16694.0 4 9160.0 5 6754.0 6 5913.0 7 5922.0 8 6343.0 9 6785.0 10 7549.0 11 8416.0 12 8962.0 13 9812.0 14 10434.0 15 11412.0 16 12317.0 17 13275.0 18 12205.0 19 10979.0 20 10681.0 21 10326.0 22 10866.0 23 12621.0 24 14370.0 25 17415.0 26 20626.0 27 25134.0 28 29951.0 29 36262.0 30 43909.0 31 54374.0 32 69228.0 33 91167.0 34 129389.0 35 194923.0 36 346502.0 37 660808.0 38 684905.0 39 90312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.02577574349483 19.665454503290814 13.058898385537523 26.249871367676835 2 15.328011391035421 21.060139009123173 37.12385761350428 26.48799198633712 3 17.666016999405567 24.413535703418876 29.71104339070594 28.20940390646962 4 12.97104068240188 16.685388726028076 35.31497739424388 35.02859319732616 5 13.784869438285922 37.46574616282844 34.746354248271885 14.003030150613755 6 33.974463793198254 35.81703706490627 16.38433387646189 13.824165265433583 7 28.536131404685115 31.972028933340805 21.215829771532242 18.276009890441834 8 26.553583818751026 35.03613591357768 19.893925592359114 18.516354675312176 9 26.469856208696356 14.880851605696085 19.378471965977447 39.27082021963011 10-11 25.58002295371869 25.205025351517275 28.236078019479898 20.97887367528414 12-13 25.873501777680662 22.763012810587654 27.853441552146023 23.510043859585654 14-15 22.99749089996757 24.50949907177227 24.879144080515502 27.61386594774466 16-17 23.3414746776337 27.5605396041762 25.850224226115575 23.247761492074535 18-19 23.47976737253676 26.740310565477483 27.09337222998805 22.686549831997706 20-21 23.853398194175185 26.01823189210054 27.01436939930405 23.114000514420226 22-23 23.751449741452223 25.886449520780413 26.70005925580783 23.662041481959537 24-25 23.613835606353714 26.124169695943618 26.714360934256327 23.547633763446346 26-27 23.41472158842399 26.252523787180298 26.721122466218965 23.611632158176747 28-29 23.549726667620554 26.503264775785322 26.579256260253015 23.367752296341106 30-31 23.7073079658992 26.215407304275335 26.443914659712004 23.63337007011346 32-33 23.419402526611478 26.30725569558518 26.318688654127314 23.954653123676028 34-35 23.93370317260153 26.269942385899242 26.37853526066541 23.417819180833817 36-37 23.9827753339106 26.034598743820712 26.40134463242294 23.581281289845744 38-39 23.75141356574537 26.133800916403004 26.47520914984918 23.639576368002444 40-41 23.896310809989494 26.06127160854704 26.46424767671038 23.578169904753086 42-43 23.73803765757966 26.073063019925375 26.24854899814167 23.940350324353297 44-45 23.667476753346243 26.097356922623305 26.425564128746803 23.80960219528365 46-47 23.887776247091374 26.12890132089233 26.206084816105395 23.777237615910906 48-49 23.581430770594437 26.29387833366799 26.1691331694425 23.95555772629507 50-51 23.680625220904222 26.287503070500872 26.249644111312936 23.782227597281967 52-53 23.97568367945695 26.131145192483707 26.136227974910952 23.756943153148395 54-55 23.408882150285095 26.10066374282652 26.401983522738988 24.0884705841494 56-57 23.502695189359688 26.23493107952468 26.256330515831333 24.006043215284297 58-59 23.438035085992755 26.06714181021406 26.394346470786488 24.100476633006696 60-61 23.400378097958523 26.075355129348683 26.51320132043051 24.011065452262283 62-63 23.483632649273073 26.117258324246844 26.433752207397387 23.965356819082693 64-65 23.22053848749775 25.985536709669304 26.3995490739459 24.394375728887045 66-67 23.191846636495033 26.106614002046598 26.33306414627463 24.368475215183743 68-69 23.465625116497577 25.94623177615961 26.330786884806834 24.25735622253598 70-71 23.292290505462823 25.856764355909483 26.270245536578894 24.5806996020488 72-73 23.28133074327601 25.99680175205219 26.200519072964056 24.521348431707743 74-75 23.25065671669335 26.164725660773964 26.130078303028505 24.454539319504182 76-77 23.307790062960805 25.881841073361215 26.25895328790293 24.551415575775046 78-79 23.28878989408163 25.854208865325322 26.29476150399776 24.562239736595288 80-81 23.35594725999355 26.00918312936636 26.078541675037837 24.55632793560226 82-83 23.30206135261916 26.03530351093766 26.097108085091293 24.565527051351893 84-85 23.22905095872681 26.044823468818624 26.151632189998637 24.574493382455934 86-87 23.240560611117665 26.1760366114565 25.94421038989811 24.63919238752772 88-89 23.06648469458933 25.98682450077564 26.016957654483207 24.92973315015182 90-91 22.963564888997258 25.952206266545915 26.125321484139146 24.95890736031768 92-93 23.062553794323083 25.83403370013008 26.270523280771442 24.832889224775396 94-95 22.92619763192484 25.66641232669698 26.379016482170698 25.028373559207484 96-97 22.89182411076954 25.499224003202762 26.39156152553788 25.217390360489816 98-99 22.749132949649763 25.620447013428926 26.21534466585415 25.415075371067164 100-101 22.707700822907935 25.55321317557088 26.281792834126033 25.457293167395157 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 55.0 1 43.0 2 58.0 3 86.5 4 79.5 5 83.5 6 146.0 7 307.5 8 450.5 9 484.0 10 427.0 11 357.5 12 352.0 13 407.0 14 438.5 15 477.0 16 558.0 17 610.5 18 718.5 19 841.0 20 967.5 21 1150.5 22 1334.0 23 1628.0 24 2115.5 25 2908.5 26 4436.0 27 6789.0 28 9875.0 29 14202.0 30 19483.0 31 25823.5 32 34217.5 33 38975.5 34 40658.5 35 44562.0 36 50320.0 37 55971.0 38 61436.0 39 67171.5 40 72787.5 41 79069.5 42 84840.5 43 90890.5 44 96645.5 45 103292.5 46 108631.5 47 111719.0 48 115237.0 49 116698.5 50 116537.5 51 116254.0 52 115637.0 53 115196.0 54 113571.5 55 107990.0 56 99733.5 57 90038.0 58 81000.5 59 71409.5 60 58887.5 61 48251.5 62 40417.5 63 31145.5 64 22212.0 65 16267.5 66 12242.5 67 9677.0 68 7407.0 69 5499.0 70 4151.5 71 2962.5 72 2071.0 73 1534.5 74 1134.0 75 816.0 76 560.0 77 347.0 78 208.5 79 117.5 80 69.0 81 43.0 82 29.0 83 20.5 84 17.0 85 15.0 86 9.0 87 7.0 88 6.5 89 3.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1621395181251144 2 2.532299479865687E-4 3 0.011105942004553797 4 0.006041343044822425 5 0.026299738883747918 6 0.0019534881701821012 7 3.61757068552241E-5 8 0.0 9 7.23514137104482E-5 10-11 0.04829456865172417 12-13 3.6175706855224096E-4 14-15 0.005335916761145555 16-17 1.808785342761205E-5 18-19 0.0013746768604985158 20-21 3.2558136169701687E-4 22-23 0.0 24-25 4.521963356903012E-4 26-27 0.003147286496404497 28-29 0.005806200950263468 30-31 0.01736433929050757 32-33 0.012552970278762761 34-35 0.010581394255153049 36-37 0.003997415607502263 38-39 0.0 40-41 0.0036899220992328576 42-43 0.008953487446667964 44-45 0.006457363673657501 46-47 0.0034005164443910653 48-49 0.009080102420661249 50-51 0.0028578808415627038 52-53 0.0018811367564716532 54-55 0.004087854874640323 56-57 0.007036174983341087 58-59 0.01517570902576651 60-61 0.006782945035354517 62-63 0.020529713640339675 64-65 0.03919637837763531 66-67 0.05958138919055409 68-69 0.04894573137511821 70-71 0.06826355883580787 72-73 0.03248578475599124 74-75 0.02631782673717553 76-77 0.22504907234634913 78-79 0.08322221362044305 80-81 0.06616536783820488 82-83 0.026643408098872546 84-85 0.05075451671787941 86-87 0.06772092323297951 88-89 0.29611624846343687 90-91 0.30090952962175405 92-93 0.05238242352636449 94-95 0.009731265144055283 96-97 0.015248060439476956 98-99 0.001049095498801499 100-101 1.2661497399328435E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2764286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.639274880733375 #Duplication Level Percentage of deduplicated Percentage of total 1 79.34184082033717 48.112316950478174 2 11.483147141520162 13.926594320210976 3 3.655506291775621 6.650017525656966 4 1.7278698323875745 4.191070948971073 5 0.9820219147064608 2.9774548412394592 6 0.6018343991721572 2.1896880938448873 7 0.4171083422243427 1.7705203193432246 8 0.29933890035368094 1.452135508883465 9 0.22935554436143268 1.2517158509957838 >10 1.1986917359845222 12.595898202638189 >50 0.04656504532208039 1.891992684653179 >100 0.014384528357242497 1.5718567254955171 >500 0.0013773482165506017 0.5932198013697755 >1k 9.581552809802853E-4 0.8255182262192928 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.61757068552241E-5 2 0.0 3.61757068552241E-5 0.0 0.0 3.61757068552241E-5 3 0.0 3.61757068552241E-5 0.0 0.0 3.61757068552241E-5 4 0.0 3.61757068552241E-5 0.0 0.0 3.61757068552241E-5 5 0.0 3.61757068552241E-5 0.0 0.0 3.61757068552241E-5 6 0.0 3.61757068552241E-5 0.0 0.0 1.447028274208964E-4 7 0.0 3.61757068552241E-5 0.0 0.0 1.447028274208964E-4 8 0.0 3.61757068552241E-5 0.0 3.61757068552241E-5 1.8087853427612048E-4 9 0.0 3.61757068552241E-5 0.0 3.61757068552241E-5 1.8087853427612048E-4 10-11 0.0 3.61757068552241E-5 0.0 3.61757068552241E-5 1.8087853427612048E-4 12-13 0.0 3.61757068552241E-5 0.0 9.043926713806024E-5 2.1705424113134457E-4 14-15 0.0 3.61757068552241E-5 0.0 1.447028274208964E-4 2.3514209455895662E-4 16-17 0.0 3.61757068552241E-5 0.0 1.6279068084850844E-4 3.4366921512462895E-4 18-19 0.0 3.61757068552241E-5 0.0 1.8087853427612048E-4 4.3410848226268915E-4 20-21 0.0 3.61757068552241E-5 0.0 1.8087853427612048E-4 4.3410848226268915E-4 22-23 0.0 3.61757068552241E-5 0.0 1.9896638770373253E-4 4.7028418911791324E-4 24-25 0.0 5.426356028283615E-5 0.0 3.2558136169701687E-4 5.426356028283614E-4 26-27 0.0 7.23514137104482E-5 0.0 5.245477494007495E-4 5.426356028283614E-4 28-29 0.0 7.23514137104482E-5 0.0 0.003165374349832109 5.426356028283614E-4 30-31 0.0 7.23514137104482E-5 0.0 0.015519378240891137 5.426356028283614E-4 32-33 0.0 7.23514137104482E-5 0.0 0.04426097733736668 5.426356028283614E-4 34-35 0.0 7.23514137104482E-5 0.0 0.08418086985210647 5.426356028283614E-4 36-37 0.0 7.23514137104482E-5 0.0 0.14558913223884937 5.426356028283614E-4 38-39 0.0 7.23514137104482E-5 0.0 0.244403075513894 5.426356028283614E-4 40-41 0.0 7.23514137104482E-5 0.0 0.35618600969653647 5.426356028283614E-4 42-43 0.0 7.23514137104482E-5 0.0 0.4735038270280282 5.426356028283614E-4 44-45 0.0 7.23514137104482E-5 0.0 0.6225658271249791 5.607234562559735E-4 46-47 0.0 7.23514137104482E-5 0.0 0.796480537831469 5.788113096835856E-4 48-49 0.0 7.23514137104482E-5 0.0 0.9732350415260939 5.788113096835856E-4 50-51 0.0 7.23514137104482E-5 0.0 1.1585450998919793 6.149870165388097E-4 52-53 0.0 7.23514137104482E-5 0.0 1.3481058038133535 6.692505768216458E-4 54-55 0.0 7.23514137104482E-5 0.0 1.5710205094552445 7.235141371044819E-4 56-57 0.0 7.23514137104482E-5 0.0 1.830219449072925 7.41601990532094E-4 58-59 0.0 7.23514137104482E-5 0.0 2.0958576645108358 7.596898439597061E-4 60-61 0.0 7.23514137104482E-5 0.0 2.377666420913031 7.596898439597061E-4 62-63 0.0 7.23514137104482E-5 0.0 2.6634183293624467 8.320412576701543E-4 64-65 0.0 7.23514137104482E-5 0.0 2.9781469790028963 8.320412576701543E-4 66-67 0.0 7.23514137104482E-5 0.0 3.3473019796070305 8.320412576701543E-4 68-69 0.0 7.23514137104482E-5 0.0 3.746609431874994 8.320412576701543E-4 70-71 0.0 7.23514137104482E-5 0.0 4.1605137818590405 8.682169645253783E-4 72-73 1.808785342761205E-5 7.23514137104482E-5 0.0 4.594893581923143 9.948319385186628E-4 74-75 7.23514137104482E-5 7.23514137104482E-5 0.0 5.047379323268287 0.0010129197919462748 76-77 7.23514137104482E-5 7.23514137104482E-5 0.0 5.559319838829991 0.0010129197919462748 78-79 7.23514137104482E-5 7.23514137104482E-5 0.0 6.131348203478222 0.0010129197919462748 80-81 7.23514137104482E-5 7.23514137104482E-5 0.0 6.715766747724367 0.0010129197919462748 82-83 7.23514137104482E-5 7.23514137104482E-5 0.0 7.3212214655068255 0.0010129197919462748 84-85 7.23514137104482E-5 7.23514137104482E-5 0.0 7.952885482905893 0.0010129197919462748 86-87 7.23514137104482E-5 7.23514137104482E-5 0.0 8.63682339671076 0.0010490954988014987 88-89 7.23514137104482E-5 7.23514137104482E-5 0.0 9.37299903121457 0.0010852712056567228 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2325 0.0 51.729023 1 GTATCAA 4030 0.0 38.808563 1 TCAACGC 4740 0.0 31.940468 4 CAACGCA 4920 0.0 30.702116 5 ATCAACG 4985 0.0 30.465883 3 TATCAAC 5090 0.0 30.210377 2 AACGCAG 5270 0.0 28.93034 6 GTACATG 6155 0.0 27.031908 1 TACATGG 6560 0.0 25.538761 2 ACGCAGA 6345 0.0 23.803392 7 ACATGGG 6820 0.0 23.590887 3 CGCAGAG 6455 0.0 23.103445 8 TACACCG 290 3.6379788E-12 22.931704 5 CATGGGG 5650 0.0 22.764063 4 AGAGTAC 6095 0.0 18.701693 10-11 GCAGAGT 7390 0.0 18.637897 9 CCCTATA 410 1.8189894E-12 18.521027 2 TAAGGTG 1595 0.0 18.464489 5 TCTATAC 825 0.0 17.833506 3 GAGTACA 4670 0.0 17.203093 1 >>END_MODULE