##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921659_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2562853 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21300636439156 33.0 31.0 34.0 28.0 34.0 2 31.35038568345512 34.0 31.0 34.0 28.0 34.0 3 31.42131327860006 34.0 31.0 34.0 28.0 34.0 4 34.9011718580816 37.0 35.0 37.0 32.0 37.0 5 34.62508540286938 37.0 35.0 37.0 32.0 37.0 6 34.59255837147117 37.0 35.0 37.0 32.0 37.0 7 34.46840844948969 37.0 35.0 37.0 31.0 37.0 8 34.41013706209447 37.0 35.0 37.0 31.0 37.0 9 35.98238720675747 39.0 37.0 39.0 31.0 39.0 10-11 35.86503771382908 39.0 37.0 39.0 30.0 39.0 12-13 35.78375544754225 39.0 37.0 39.0 30.0 39.0 14-15 37.006283232007455 40.0 38.0 41.0 31.0 41.0 16-17 36.96661181893772 40.0 38.0 41.0 31.0 41.0 18-19 36.92399173889412 40.0 37.5 41.0 30.5 41.0 20-21 36.857229618710086 40.0 37.0 41.0 30.0 41.0 22-23 36.76180217905592 40.0 37.0 41.0 30.0 41.0 24-25 36.67213550679653 40.0 37.0 41.0 30.0 41.0 26-27 36.53569010786026 40.0 37.0 41.0 30.0 41.0 28-29 36.41053837266515 40.0 37.0 41.0 29.5 41.0 30-31 36.24569883641395 40.0 36.5 41.0 29.0 41.0 32-33 36.183016154262454 40.0 36.0 41.0 28.5 41.0 34-35 36.30218861557803 40.0 37.0 41.0 29.5 41.0 36-37 36.28221478172958 40.0 37.0 41.0 29.0 41.0 38-39 36.168639207945205 40.0 36.0 41.0 28.0 41.0 40-41 36.067405348648556 40.0 36.0 41.0 28.0 41.0 42-43 35.92936134066214 40.0 36.0 41.0 27.5 41.0 44-45 35.78116517022241 40.0 35.5 41.0 27.0 41.0 46-47 35.61265960240404 40.0 35.0 41.0 26.5 41.0 48-49 35.45000688685617 40.0 35.0 41.0 26.0 41.0 50-51 35.279008003970574 39.0 35.0 41.0 26.0 41.0 52-53 35.088060064311136 39.0 35.0 41.0 24.5 41.0 54-55 34.86652472849594 39.0 35.0 41.0 24.0 41.0 56-57 34.63140433727568 39.0 35.0 41.0 23.5 41.0 58-59 34.37813386097447 38.0 34.0 40.0 23.0 41.0 60-61 34.09751281091815 38.0 34.0 40.0 23.0 41.0 62-63 33.78960186167525 37.0 34.0 40.0 22.0 41.0 64-65 33.44527817241176 36.5 34.0 40.0 21.5 41.0 66-67 33.08917971495049 36.0 33.0 39.0 20.5 41.0 68-69 32.729384595995164 35.5 33.0 39.0 19.5 40.5 70-71 32.3344319787362 35.0 33.0 38.5 18.0 40.0 72-73 31.976482069006686 35.0 33.0 37.0 16.5 39.5 74-75 31.582052501645627 35.0 32.0 37.0 12.0 39.0 76-77 28.907633992273453 32.5 28.0 34.5 7.5 36.5 78-79 30.467233782039003 34.5 31.0 35.5 7.0 37.0 80-81 30.656127175456415 35.0 32.0 35.0 7.0 37.0 82-83 30.486303350211656 35.0 32.0 35.0 2.0 37.0 84-85 30.291759613212307 35.0 32.0 35.0 2.0 36.0 86-87 30.085974497952087 35.0 31.0 35.0 2.0 36.0 88-89 29.815049087871994 34.5 31.0 35.0 2.0 35.5 90-91 29.61892625133006 34.0 31.0 35.0 2.0 35.0 92-93 29.45672205936119 34.0 31.0 35.0 2.0 35.0 94-95 29.345281996275247 34.0 31.0 35.0 2.0 35.0 96-97 29.130873873764905 34.0 31.0 35.0 2.0 35.0 98-99 28.915434868874648 34.0 31.0 35.0 2.0 35.0 100-101 27.788459970197277 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 56597.0 3 18968.0 4 10071.0 5 7304.0 6 6318.0 7 6301.0 8 6438.0 9 6959.0 10 7703.0 11 8320.0 12 8932.0 13 9193.0 14 9968.0 15 11097.0 16 11820.0 17 12301.0 18 11549.0 19 10456.0 20 10151.0 21 10028.0 22 10550.0 23 11832.0 24 14260.0 25 16866.0 26 19708.0 27 23650.0 28 28438.0 29 34144.0 30 41768.0 31 51717.0 32 65681.0 33 86291.0 34 122156.0 35 184454.0 36 325942.0 37 610274.0 38 602748.0 39 71900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.047772802787556 19.38088923748993 13.014699474245534 26.556638485476974 2 15.4061568908388 20.882633878195072 36.85175733908942 26.859451891876706 3 17.77904210684049 24.210418695836765 29.29797738567968 28.712561811643067 4 13.141723520588378 16.405614685715268 34.71647959892426 35.73618219477209 5 14.062285957149864 37.18927564094308 34.40854801526297 14.339890386644077 6 34.42478577083674 35.33551090548476 16.20934659958881 14.030356724089692 7 29.07830807241308 31.620280843372928 20.91459046406113 18.38682062015286 8 26.86884499423104 34.72032925805733 19.70034957135661 18.710476176355023 9 26.670649210586177 15.009222151424332 19.039850541447787 39.28027809654171 10-11 25.786322127105244 24.994271250343044 27.897761630142554 21.321644992409166 12-13 26.127008801933478 22.540917401982018 27.560902996122277 23.77117079996223 14-15 23.222375249465948 24.192709750892067 24.62297449452721 27.961940505114775 16-17 23.619790132325186 27.360016356771144 25.592903689755133 23.427289821148538 18-19 23.678747783199334 26.50491744429465 26.865458489980742 22.95087628252527 20-21 24.06836933173875 25.80901303044078 26.772532088362738 23.35008554945773 22-23 23.97704823491632 25.62811835091595 26.554741922381037 23.84009149178669 24-25 23.83249035492886 25.85261453369556 26.496549234978804 23.81834587639677 26-27 23.547037436994504 26.089615835974517 26.48067668901551 23.88267003801547 28-29 23.737490900655153 26.284234364394056 26.344912922367154 23.63336181258364 30-31 23.892831044303147 25.98791563776573 26.139589701461812 23.97966361646931 32-33 23.649406588260547 26.08851664138224 26.04980463509934 24.212272135257876 34-35 24.138544643214278 26.04362616789607 26.10463919486999 23.71318999401967 36-37 24.20782300873906 25.83125613599152 26.109629194911086 23.851291660358335 38-39 23.92589430607218 25.90285123649308 26.191962629148062 23.979291828286676 40-41 24.032532278839856 25.793982004466304 26.302635414264458 23.870850302429385 42-43 24.01715838827439 25.83433980008546 25.965866631285866 24.18263518035429 44-45 23.808117159628235 25.883618860499308 26.23598744662523 24.072276533247226 46-47 24.079453866849803 25.88314483103079 25.939139477396306 24.0982618247231 48-49 23.76370533486147 26.047482300182196 25.93542800526185 24.253384359694483 50-51 23.90273196153855 26.022856482858025 26.031109258951435 24.043302296651987 52-53 24.20997202656949 25.782711725389802 25.998433737619447 24.008882510421266 54-55 23.502023900502174 25.861540505617114 26.246537166430038 24.389898427450674 56-57 23.65483079317249 25.965188928730726 26.083270604881776 24.29670967321501 58-59 23.616034485550923 25.728805218569857 26.159933142488413 24.495227153390807 60-61 23.410373891603413 25.86560146910167 26.346626125371174 24.377398513923744 62-63 23.585336068910312 25.879360899071806 26.257460620141305 24.277842411876577 64-65 23.340053947075653 25.80895240400192 26.137045870628512 24.713947778293914 66-67 23.333533754504106 25.880880327868212 26.052513730476996 24.733072187150686 68-69 23.589948494005476 25.721297661393223 26.090098305847658 24.59865553875364 70-71 23.38466254015636 25.654757314533995 25.981142739447087 24.97943740586256 72-73 23.35680524403117 25.903313370402053 25.85425010982637 24.8856312757404 74-75 23.33679135852774 26.059986199122925 25.787012968765367 24.816209473583967 76-77 23.40839770108245 25.690655861788077 26.035516958261383 24.86542947886809 78-79 23.317807576158152 25.77952591702786 25.95820815553302 24.944458351280964 80-81 23.463143458165153 25.905617187843173 25.722669347793197 24.908570006198477 82-83 23.30340415899085 25.939773472382676 25.819581915259 24.937240453367473 84-85 23.186365285774603 25.88761245518043 25.895517916019024 25.03050434302595 86-87 23.156297983204595 26.094409959714852 25.652708241617184 25.09658381546337 88-89 23.002063474236312 25.8951733173567 25.725454224565325 25.37730898384166 90-91 22.87231180349816 25.940427293783213 25.75377707910318 25.43348382361545 92-93 23.003404615144973 25.8147399027844 25.891334959709518 25.29052052236111 94-95 22.83184200359792 25.571589680752677 26.005330544488192 25.591237771161207 96-97 22.848845048315752 25.370946312859115 26.012125426810456 25.768083212014677 98-99 22.628296598566195 25.544485765936187 25.866473442845038 25.96074419265258 100-101 22.559132434255783 25.542921178735075 25.86613569507997 26.031810691929174 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 44.0 2 62.0 3 99.5 4 99.5 5 109.5 6 180.5 7 352.0 8 507.5 9 522.5 10 439.5 11 379.5 12 388.0 13 390.5 14 452.0 15 502.5 16 520.0 17 624.0 18 717.0 19 795.0 20 931.0 21 1066.0 22 1250.0 23 1531.0 24 1840.0 25 2325.5 26 3111.5 27 4358.0 28 6262.0 29 8988.5 30 12722.5 31 17892.5 32 25752.5 33 30199.0 34 31940.5 35 36641.0 36 43026.5 37 49379.0 38 55470.5 39 61580.5 40 67128.5 41 73252.5 42 79001.5 43 84406.5 44 90274.0 45 97436.0 46 102098.0 47 105479.5 48 109552.0 49 110450.5 50 110177.0 51 110025.5 52 110231.0 53 110555.5 54 108792.5 55 103171.5 56 95258.5 57 85824.5 58 77275.0 59 68277.0 60 56472.0 61 47054.0 62 39471.0 63 30241.0 64 21595.0 65 15873.0 66 12119.0 67 9619.5 68 7511.0 69 5650.0 70 4229.5 71 3062.0 72 2207.0 73 1677.5 74 1282.0 75 949.5 76 686.0 77 426.5 78 252.5 79 135.5 80 66.5 81 42.5 82 22.5 83 16.5 84 11.5 85 6.5 86 5.0 87 6.0 88 6.5 89 3.0 90 1.5 91 1.0 92 0.5 93 1.5 94 1.5 95 1.0 96 0.5 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15818308736396508 2 3.901901513664654E-5 3 0.008935354466292058 4 0.005657757194813749 5 0.022396914688435115 6 0.0023411409081987924 7 3.901901513664654E-5 8 0.0 9 7.803803027329308E-5 10-11 0.04729104634561561 12-13 2.731331059565258E-4 14-15 0.005013943445059081 16-17 0.0 18-19 0.0014827225751925686 20-21 3.1215212109317233E-4 22-23 0.0 24-25 6.047947346180213E-4 26-27 0.0031410307185000463 28-29 0.0065747040505249425 30-31 0.01757806631905927 32-33 0.013285974654028148 34-35 0.011139928821512587 36-37 0.004096996589347887 38-39 0.0 40-41 0.0041360156044845334 42-43 0.010066905905254808 44-45 0.007628217459214399 46-47 0.004214053634757827 48-49 0.009988867874981515 50-51 0.0030825021957950768 52-53 0.0024972169687453786 54-55 0.004038468066642917 56-57 0.008584183330062238 58-59 0.015158887380587181 60-61 0.007745274504624339 62-63 0.02208476256734194 64-65 0.04225759339298821 66-67 0.06165004391590153 68-69 0.05097834327602871 70-71 0.0690831662994327 72-73 0.03334174843426447 74-75 0.02719625355024264 76-77 0.22383258033137288 78-79 0.08435911072542981 80-81 0.0679125958453333 82-83 0.027040177489696053 84-85 0.051992837669581515 86-87 0.06771750076965007 88-89 0.29084773882856335 90-91 0.29414484560761 92-93 0.0518952901317399 94-95 0.01026200098093804 96-97 0.015080849350313888 98-99 8.58418333006224E-4 100-101 1.5607606054658616E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2562853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.86735127246957 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14968559000705 47.38482030322474 2 11.482138576806554 13.748104470737035 3 3.775520158678927 6.78091174727764 4 1.722609661730765 4.125123108967427 5 0.9639258375052981 2.8853843357269553 6 0.6074296852368728 2.1819123803640896 7 0.4429880079717631 1.8564363077915962 8 0.3288345825462289 1.5749164371064779 9 0.2340702273292661 1.261184806975318 >10 1.2235620148649808 12.77953217392938 >50 0.051068387358479635 2.0544238595354236 >100 0.015550833179895907 1.7066010656261228 >500 0.0013736293115523817 0.5687567174271135 >1k 0.0012428074723397195 1.091892285310734 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.1705704540993963E-4 7 0.0 0.0 0.0 0.0 1.1705704540993963E-4 8 0.0 0.0 0.0 0.0 1.1705704540993963E-4 9 0.0 0.0 0.0 0.0 1.1705704540993963E-4 10-11 0.0 3.901901513664654E-5 0.0 0.0 1.1705704540993963E-4 12-13 0.0 3.901901513664654E-5 0.0 3.901901513664654E-5 1.365665529782629E-4 14-15 0.0 3.901901513664654E-5 0.0 3.901901513664654E-5 2.3411409081987926E-4 16-17 0.0 3.901901513664654E-5 0.0 3.901901513664654E-5 2.731331059565258E-4 18-19 0.0 3.901901513664654E-5 0.0 3.901901513664654E-5 2.731331059565258E-4 20-21 0.0 3.901901513664654E-5 0.0 5.852852270496981E-5 3.1215212109317233E-4 22-23 0.0 3.901901513664654E-5 0.0 1.5607606054658616E-4 3.316616286614956E-4 24-25 0.0 3.901901513664654E-5 0.0 3.316616286614956E-4 3.511711362298189E-4 26-27 0.0 3.901901513664654E-5 0.0 9.36456363279517E-4 4.29209166503112E-4 28-29 0.0 3.901901513664654E-5 0.0 0.004565224770987645 4.682281816397585E-4 30-31 0.0 3.901901513664654E-5 0.0 0.019646074121301534 4.682281816397585E-4 32-33 0.0 3.901901513664654E-5 0.0 0.05720187619032383 4.682281816397585E-4 34-35 0.0 3.901901513664654E-5 0.0 0.1082387479890575 4.682281816397585E-4 36-37 0.0 3.901901513664654E-5 0.0 0.1879741054207947 4.682281816397585E-4 38-39 0.0 3.901901513664654E-5 0.0 0.3079965959811195 5.07247196776405E-4 40-41 0.0 3.901901513664654E-5 0.0 0.4442705063458575 5.07247196776405E-4 42-43 0.0 3.901901513664654E-5 0.0 0.5921915927288846 5.07247196776405E-4 44-45 0.0 3.901901513664654E-5 0.0 0.7730642373948096 5.462662119130516E-4 46-47 0.0 3.901901513664654E-5 0.0 0.9913951365919154 5.852852270496981E-4 48-49 0.0 3.901901513664654E-5 0.0 1.2098235833268627 5.852852270496981E-4 50-51 0.0 3.901901513664654E-5 0.0 1.433558616120394 5.852852270496981E-4 52-53 0.0 3.901901513664654E-5 0.0 1.657040025315537 6.828327648913145E-4 54-55 0.0 3.901901513664654E-5 0.0 1.921062191237656 7.413612875962843E-4 56-57 0.0 3.901901513664654E-5 0.0 2.232004722861592 7.608707951646076E-4 58-59 0.0 3.901901513664654E-5 0.0 2.5472198366429915 7.803803027329309E-4 60-61 0.0 3.901901513664654E-5 0.0 2.877613347312546 7.803803027329309E-4 62-63 3.901901513664654E-5 3.901901513664654E-5 0.0 3.2113429837762837 7.803803027329309E-4 64-65 3.901901513664654E-5 3.901901513664654E-5 0.0 3.579448372575407 7.803803027329309E-4 66-67 3.901901513664654E-5 3.901901513664654E-5 0.0 4.016695456196668 7.803803027329309E-4 68-69 3.901901513664654E-5 3.901901513664654E-5 0.0 4.479597542270275 7.803803027329309E-4 70-71 3.901901513664654E-5 3.901901513664654E-5 0.0 4.962535892616549 7.803803027329309E-4 72-73 7.803803027329308E-5 3.901901513664654E-5 0.0 5.464866693485737 7.998898103012541E-4 74-75 7.803803027329308E-5 3.901901513664654E-5 0.0 5.987097192074613 8.779278405745472E-4 76-77 7.803803027329308E-5 3.901901513664654E-5 0.0 6.575406392797403 8.974373481428705E-4 78-79 7.803803027329308E-5 3.901901513664654E-5 0.0 7.226575226905328 8.974373481428705E-4 80-81 7.803803027329308E-5 3.901901513664654E-5 0.0 7.898170515437288 9.36456363279517E-4 82-83 7.803803027329308E-5 3.901901513664654E-5 0.0 8.588260817144018 0.0010535134086894567 84-85 7.803803027329308E-5 3.901901513664654E-5 0.0 9.307810475278917 0.0010535134086894567 86-87 7.803803027329308E-5 3.901901513664654E-5 0.0 10.077909267523342 0.0010925324238261033 88-89 7.803803027329308E-5 3.901901513664654E-5 0.0 10.90011795448276 0.0011315514389627498 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1950 0.0 49.964508 1 GTATCAA 3360 0.0 41.58632 1 TCAACGC 4300 0.0 31.89222 4 ATCAACG 4465 0.0 30.820549 3 CAACGCA 4415 0.0 30.763681 5 TATCAAC 4505 0.0 30.125555 2 GTACATG 6395 0.0 29.356136 1 AACGCAG 4740 0.0 28.549706 6 TACATGG 6670 0.0 26.963558 2 ACATGGG 6885 0.0 26.259405 3 ACGCAGA 5480 0.0 24.52068 7 CATGGGG 5700 0.0 23.3098 4 CGCAGAG 5865 0.0 22.506264 8 ATGGGGG 3005 0.0 18.964428 5 AGAGTAC 5630 0.0 18.596676 10-11 GCAGAGT 6850 0.0 18.161255 9 GAGTACA 4630 0.0 17.245298 1 GTATAGC 565 0.0 16.823793 1 CAGAGTA 6260 0.0 16.611351 10-11 ATAGGAC 670 0.0 16.289843 3 >>END_MODULE