##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921657_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2969309 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.612396688926616 31.0 31.0 34.0 27.0 34.0 2 30.659495525726694 33.0 31.0 34.0 27.0 34.0 3 30.717103541598398 33.0 31.0 34.0 27.0 34.0 4 34.18624703592654 37.0 35.0 37.0 30.0 37.0 5 34.193708367839115 37.0 35.0 37.0 30.0 37.0 6 34.24530286339347 37.0 35.0 37.0 30.0 37.0 7 34.152363394985166 37.0 35.0 37.0 30.0 37.0 8 34.12329299510425 37.0 35.0 37.0 30.0 37.0 9 35.710080695542295 39.0 37.0 39.0 30.0 39.0 10-11 35.61641125931993 39.0 37.0 39.0 30.0 39.0 12-13 35.516235090386346 39.0 37.0 39.0 30.0 39.0 14-15 36.68458368596869 40.0 37.0 41.0 30.0 41.0 16-17 36.62584695631206 40.0 37.0 41.0 30.0 41.0 18-19 36.59804132880748 40.0 37.0 41.0 30.0 41.0 20-21 36.520649922254634 40.0 37.0 41.0 29.0 41.0 22-23 36.422328898743785 40.0 37.0 41.0 29.0 41.0 24-25 36.31414379574507 40.0 37.0 41.0 28.5 41.0 26-27 36.16603896731529 40.0 36.0 41.0 27.5 41.0 28-29 36.02869960654145 40.0 36.0 41.0 27.0 41.0 30-31 35.87008021058098 40.0 36.0 41.0 27.0 41.0 32-33 35.68012322058769 40.0 36.0 41.0 26.5 41.0 34-35 35.507176753918166 39.5 35.0 41.0 25.5 41.0 36-37 35.4600231905807 39.5 35.0 41.0 25.5 41.0 38-39 35.62063126471513 40.0 35.5 41.0 26.0 41.0 40-41 35.66370946910544 40.0 36.0 41.0 26.0 41.0 42-43 35.484845127266986 40.0 35.0 41.0 25.0 41.0 44-45 35.35077807665016 40.0 35.0 41.0 24.5 41.0 46-47 35.17502893770907 40.0 35.0 41.0 24.0 41.0 48-49 34.99845216513337 39.5 35.0 41.0 23.0 41.0 50-51 33.27534958470136 37.0 32.5 39.5 19.0 40.0 52-53 33.39230373127216 37.5 33.5 39.5 20.5 40.0 54-55 34.294867256994806 39.0 34.0 40.5 22.0 41.0 56-57 34.306889919506524 39.0 34.0 41.0 21.0 41.0 58-59 34.109148626835406 38.0 34.0 41.0 20.0 41.0 60-61 33.85435382440831 38.0 34.0 40.0 19.5 41.0 62-63 33.553062177092386 37.0 34.0 40.0 18.0 41.0 64-65 33.250788146333036 37.0 33.5 40.0 16.5 41.0 66-67 32.9017229261084 36.0 33.0 39.5 13.0 41.0 68-69 32.53753011222476 36.0 33.0 39.0 9.5 41.0 70-71 32.118766857878384 35.0 33.0 39.0 7.0 40.5 72-73 31.750519733715826 35.0 32.0 37.5 3.5 40.0 74-75 31.35490513112647 35.0 32.0 37.0 2.0 39.0 76-77 30.971844122656147 35.0 32.0 36.5 2.0 39.0 78-79 30.612400730270913 35.0 31.5 36.0 2.0 38.5 80-81 30.287051465509315 35.0 31.0 36.0 2.0 37.0 82-83 29.95517189352809 35.0 31.0 35.0 2.0 37.0 84-85 29.679309900047453 35.0 31.0 35.0 2.0 36.5 86-87 29.423775026445547 35.0 31.0 35.0 2.0 36.0 88-89 29.159206064441257 35.0 30.5 35.0 2.0 36.0 90-91 28.90400274946124 35.0 30.0 35.0 2.0 35.5 92-93 28.688187217968895 34.0 30.0 35.0 2.0 35.0 94-95 28.423786982089098 34.0 30.0 35.0 2.0 35.0 96-97 28.147932060960983 34.0 29.0 35.0 2.0 35.0 98-99 27.831075681244357 34.0 29.0 35.0 2.0 35.0 100-101 26.71661942222921 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 88169.0 3 15800.0 4 11017.0 5 8598.0 6 7954.0 7 8246.0 8 8874.0 9 9292.0 10 10422.0 11 11002.0 12 11280.0 13 11839.0 14 12617.0 15 13972.0 16 14201.0 17 14849.0 18 13600.0 19 13366.0 20 12940.0 21 13810.0 22 14767.0 23 17191.0 24 19874.0 25 23113.0 26 27480.0 27 32430.0 28 38368.0 29 45138.0 30 53676.0 31 65269.0 32 80874.0 33 103374.0 34 142878.0 35 209999.0 36 353593.0 37 637637.0 38 667737.0 39 124042.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03565898786769 17.61390574166146 11.849735232225683 25.50070003824517 2 16.701835485422382 19.604012918937812 37.89210199665197 25.802049598987843 3 19.168067252379423 22.82399195743073 29.77762619510375 28.230314595086092 4 13.364722804413667 15.017169171185179 36.0307585811312 35.58734944326995 5 14.080848479701608 36.85576963905508 34.69905081186152 14.364331069381791 6 34.450303538180066 34.88809639930697 16.41733333692603 14.244266725586934 7 29.272954844463968 31.608639446204545 20.820379575693845 18.29802613363764 8 27.099888977814423 34.01927258910743 20.01710469230417 18.863733740773974 9 26.83188711552633 14.64593597303447 19.159657865417547 39.36251904602165 10-11 25.754293485354363 24.657114828365845 28.20130436064014 21.387287325639655 12-13 26.213039527525765 22.402305442498257 27.62603256892284 23.75862246105313 14-15 23.225451273663726 24.16436059576058 24.678684458915495 27.931503671660202 16-17 23.50975524346547 27.204456960387645 25.876471144075225 23.409316652071656 18-19 23.598974060158607 26.341611695579463 27.15961852282851 22.89979572143342 20-21 23.921581573128254 25.745718318792843 27.064004706493446 23.26869540158546 22-23 23.826436578883666 25.678401669175788 26.790315182259516 23.70484656968103 24-25 23.63898346797131 25.84692051948804 26.796834585550467 23.71726142699018 26-27 23.41058853093296 25.984388168882376 26.777898072050355 23.827125228134307 28-29 23.603680920843225 26.292695923212765 26.57062424151993 23.53299891442408 30-31 23.74869313451014 25.972570644837074 26.397167200640233 23.88156902001256 32-33 23.407308809863906 26.084076809831576 26.326023131327997 24.18259124897652 34-35 24.010204274088053 26.08019202815084 26.332469785945328 23.577133911815782 36-37 24.09647906997186 25.744130786975255 26.369752464102064 23.789637678950818 38-39 23.75270948768623 25.88842232038572 26.44808560970714 23.91078258222091 40-41 23.95185078350079 25.784995265670563 26.58626978790575 23.6768841629229 42-43 23.81339204565113 25.795439106083016 26.31443214144965 24.07673670681619 44-45 23.682005078364714 25.827393979561347 26.647342851709826 23.843258090364117 46-47 23.941384017535185 25.923001770054853 26.22046885361528 23.915145358794675 48-49 23.55912059287739 26.050671732298653 26.220939876782563 24.169267798041393 50-51 23.674700533354436 26.07836424249041 26.363492632102204 23.883442592052955 52-53 24.042126763346523 25.740551962455736 26.366385257961543 23.850936016236197 54-55 23.288140472418302 25.768350913084554 26.716137119865895 24.227371494631242 56-57 23.434414341291625 25.988891523184282 26.53522001382021 24.041474121703885 58-59 23.481440441717368 25.664494003053527 26.585481062758383 24.26858449247072 60-61 23.22705685133877 25.690801070860008 26.864153243084647 24.217988834716575 62-63 23.446885062938954 25.674153103732465 26.83963369742087 24.039328135907713 64-65 23.17239466100046 25.702039223243368 26.646770598480053 24.478795517276115 66-67 23.135618459762803 25.767819522990333 26.58966521241349 24.506896804833374 68-69 23.52525202246499 25.48242613120101 26.65022091248626 24.34210093384774 70-71 23.34326738526575 25.467345853478136 26.5715137011632 24.617873060092915 72-73 23.36746205866442 25.670484507759028 26.483779490569802 24.47827394300675 74-75 23.325507948364947 25.894723627459932 26.379078566403873 24.40068985777125 76-77 23.495369296319648 25.53343232909607 26.52797361432787 24.443224760256413 78-79 23.425487852046956 25.665668540740345 26.46757249519556 24.441271112017134 80-81 23.603471322099807 25.730466218405702 26.341086762799744 24.32497569669475 82-83 23.55492878163149 25.80063177326371 26.36121789089262 24.283221554212183 84-85 23.497841546930744 25.80315043017177 26.44317648686871 24.255831536028786 86-87 23.647340389887887 25.899644876689216 26.19920157598523 24.253813157437666 88-89 23.54371738215719 25.71564945889888 26.167491130174657 24.573142028769272 90-91 23.503763452022213 25.64400155895512 26.308903682871126 24.543331306151543 92-93 23.738319870764744 25.53989662597205 26.417882157388924 24.30390134587428 94-95 23.674464633513786 25.3400079973088 26.50636940578713 24.479157963390286 96-97 23.816538682018074 25.083252477824658 26.433438192293647 24.666770647863625 98-99 23.73962444788627 25.187998860326537 26.34873737953422 24.723639312252978 100-101 23.953258722843977 25.051484613696594 26.450093685116727 24.545162978342702 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 74.5 2 117.0 3 172.5 4 151.0 5 157.5 6 281.0 7 513.5 8 773.5 9 885.0 10 792.0 11 719.0 12 751.5 13 848.0 14 985.0 15 1083.0 16 1172.0 17 1319.5 18 1457.0 19 1629.0 20 1796.0 21 1995.5 22 2229.5 23 2592.0 24 3087.5 25 3724.5 26 4783.0 27 6360.0 28 8716.5 29 11853.5 30 16097.5 31 22211.0 32 31918.0 33 36815.0 34 37762.0 35 43018.0 36 50115.0 37 57766.5 38 65154.5 39 72058.0 40 78530.0 41 84609.0 42 90846.0 43 97680.0 44 104105.0 45 112831.5 46 118873.5 47 121882.5 48 125535.5 49 126547.5 50 125959.0 51 125664.0 52 125446.0 53 125327.0 54 124017.0 55 117873.5 56 108479.5 57 97951.5 58 89760.5 59 79331.5 60 64361.5 61 52684.5 62 44267.0 63 34374.5 64 24330.5 65 17684.0 66 13349.5 67 10394.0 68 8052.0 69 6187.0 70 4735.5 71 3482.5 72 2524.0 73 1904.5 74 1493.5 75 1133.0 76 820.0 77 557.0 78 364.0 79 254.0 80 207.5 81 151.0 82 120.0 83 105.5 84 87.0 85 71.0 86 54.0 87 46.0 88 41.0 89 34.5 90 43.0 91 39.5 92 31.0 93 26.0 94 15.5 95 15.0 96 15.0 97 8.0 98 3.5 99 6.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054356080825538874 2 0.07382188920048402 3 0.07065616949936837 4 0.06978054490118744 5 0.06503196534951397 6 0.010945307477261546 7 0.013976315701733973 8 0.01795030426270893 9 0.00623040579474888 10-11 0.014195221851279203 12-13 0.022951467833088438 14-15 0.04167636308649588 16-17 0.02790211459972674 18-19 0.010911629608100739 20-21 0.02170538667413866 22-23 0.0383085761704154 24-25 0.03504182286181735 26-27 0.02232842725361355 28-29 0.012730234542784196 30-31 0.012561845196980174 32-33 0.008823601720130846 34-35 0.005422136934889565 36-37 7.57752056118107E-4 38-39 0.003805599215170937 40-41 0.0013302758318517877 42-43 0.23040714186364572 44-45 0.20050119404885108 46-47 0.20624327074076831 48-49 0.2133661400682785 50-51 0.2048456391705949 52-53 0.21215373677848956 54-55 0.20858388264744424 56-57 0.21070558840457493 58-59 0.21922608930225854 60-61 0.22373892376980636 62-63 0.21013306462884127 64-65 0.21030145397464528 66-67 0.2075061908342985 68-69 0.20312806784339388 70-71 0.1941529157120394 72-73 0.2059738477874819 74-75 0.20508138425472056 76-77 0.19811006533843398 78-79 0.21631295361984895 80-81 0.22729193896627126 82-83 0.22549017296616825 84-85 0.2202195864425023 86-87 0.23906235423797254 88-89 0.2316195451534347 90-91 0.2380520181631484 92-93 0.23438113042462067 94-95 0.23784995094818356 96-97 0.24365938337842238 98-99 0.23766472266779914 100-101 0.24446765223828168 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2969309.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.09763463077662 #Duplication Level Percentage of deduplicated Percentage of total 1 78.31310814073316 45.498063435608124 2 11.989848979131436 13.931637305355366 3 3.9024098242744243 6.801623404507459 4 1.7852988022697536 4.14886550084125 5 1.0362995807458208 3.0103277205098844 6 0.6233547256730855 2.1729261058513747 7 0.4390394212846018 1.7855006320410285 8 0.3196813340987731 1.48581834773998 9 0.24013714945344744 1.255626033320033 >10 1.264390558073815 12.935612912067013 >50 0.061162229825397665 2.390028085830819 >100 0.021603990652270474 2.1570607458467563 >500 0.0021526152383497944 0.8371708082019621 >1k 0.001512648545662554 1.5897389622790044 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA 2994 0.10083154026744943 No Hit CCTCAGACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGG 2986 0.100562117314163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.367786916080475E-5 0.0 0.0 0.0 6 0.0 3.367786916080475E-5 0.0 0.0 6.73557383216095E-5 7 0.0 3.367786916080475E-5 0.0 0.0 6.73557383216095E-5 8 0.0 3.367786916080475E-5 0.0 0.0 1.34711476643219E-4 9 0.0 3.367786916080475E-5 0.0 0.0 1.34711476643219E-4 10-11 0.0 3.367786916080475E-5 0.0 0.0 1.34711476643219E-4 12-13 0.0 6.73557383216095E-5 0.0 1.6838934580402377E-5 2.3574508412563326E-4 14-15 0.0 1.1787254206281663E-4 0.0 3.367786916080475E-5 3.7045656076885227E-4 16-17 0.0 1.34711476643219E-4 0.0 6.73557383216095E-5 4.714901682512665E-4 18-19 0.0 1.34711476643219E-4 0.0 1.0103360748241426E-4 5.051680374120713E-4 20-21 0.0 1.34711476643219E-4 0.0 1.0103360748241426E-4 5.38845906572876E-4 22-23 1.6838934580402377E-5 1.34711476643219E-4 0.0 1.34711476643219E-4 6.062016448944855E-4 24-25 3.367786916080475E-5 1.34711476643219E-4 0.0 4.5465123367086416E-4 6.73557383216095E-4 26-27 3.367786916080475E-5 1.34711476643219E-4 0.0 0.001296597962690983 6.73557383216095E-4 28-29 3.367786916080475E-5 1.34711476643219E-4 0.0 0.008756245981809236 6.73557383216095E-4 30-31 3.367786916080475E-5 1.34711476643219E-4 0.0 0.03697830033856362 6.73557383216095E-4 32-33 3.367786916080475E-5 1.34711476643219E-4 0.0 0.0935571205287156 6.73557383216095E-4 34-35 3.367786916080475E-5 1.34711476643219E-4 0.0 0.17076363557986052 6.73557383216095E-4 36-37 3.367786916080475E-5 1.34711476643219E-4 0.0 0.28981490306330526 6.73557383216095E-4 38-39 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 0.47381394122336207 7.072352523768998E-4 40-41 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 0.6731027319824242 7.072352523768998E-4 42-43 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 0.8796322646110593 7.577520561181069E-4 44-45 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 1.1391539243642208 8.251077944397164E-4 46-47 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 1.4423052636152047 8.419467290201188E-4 48-49 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 1.7437390315389876 8.419467290201188E-4 50-51 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 2.0567074696503465 9.093024673417283E-4 52-53 3.367786916080475E-5 1.34711476643219E-4 3.367786916080475E-5 2.36905286718223 9.093024673417283E-4 54-55 3.367786916080475E-5 1.5155041122362137E-4 3.367786916080475E-5 2.7298943963056725 9.766582056633377E-4 56-57 3.367786916080475E-5 1.6838934580402375E-4 3.367786916080475E-5 3.14494045584343 9.9349714024374E-4 58-59 3.367786916080475E-5 2.0206721496482852E-4 3.367786916080475E-5 3.5651392293627913 0.0010103360748241427 60-61 3.367786916080475E-5 2.0206721496482852E-4 3.367786916080475E-5 3.9964348607706373 0.001077691813145752 62-63 3.367786916080475E-5 2.0206721496482852E-4 3.367786916080475E-5 4.434449227076064 0.0011450475514673615 64-65 3.367786916080475E-5 2.0206721496482852E-4 3.367786916080475E-5 4.914207312206308 0.001161886486047764 66-67 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 5.471794952967172 0.0011787254206281665 68-69 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 6.059136991131607 0.0012124032897889712 70-71 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 6.65728962529666 0.0012292422243693735 72-73 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 7.263339719779921 0.001481826243075409 74-75 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 7.896803599760078 0.0015491819813970185 76-77 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 8.613990662473995 0.0015828598505578234 78-79 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 9.38630839700415 0.0015828598505578234 80-81 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 10.169824023030273 0.0015996987851382258 82-83 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 10.980096716104656 0.0016502155888794329 84-85 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 11.81055929174094 0.0016502155888794329 86-87 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 12.714304910671135 0.0016502155888794329 88-89 3.367786916080475E-5 2.69422953286438E-4 3.367786916080475E-5 13.668853595230406 0.0016502155888794329 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2250 0.0 50.413925 1 GTATCAA 4065 0.0 40.864166 1 TCAACGC 4860 0.0 33.01106 4 CAACGCA 4860 0.0 33.00939 5 ATCAACG 5080 0.0 31.48695 3 GTACATG 7005 0.0 30.827507 1 AACGCAG 5305 0.0 30.581842 6 TATCAAC 5230 0.0 30.494673 2 TACATGG 7420 0.0 28.40308 2 ACATGGG 7735 0.0 26.263214 3 ACGCAGA 6295 0.0 25.171991 7 CATGGGG 6360 0.0 23.732805 4 CGCAGAG 6640 0.0 23.723207 8 GCAGAGT 7720 0.0 19.298803 9 CGTATAC 255 2.6997805E-7 18.613337 3 GAGTACA 5255 0.0 18.604998 1 GTGTAAG 1255 0.0 18.530514 1 AGAGTAC 6525 0.0 17.77967 10-11 ATGGGGG 3640 0.0 17.472721 5 CAGAGTA 7025 0.0 17.324726 10-11 >>END_MODULE