##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921657_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2969309 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39849709141083 33.0 31.0 34.0 29.0 34.0 2 31.524101735454277 34.0 31.0 34.0 28.0 34.0 3 31.597714821865964 34.0 31.0 34.0 28.0 34.0 4 35.072869142281924 37.0 35.0 37.0 32.0 37.0 5 34.809212176974505 37.0 35.0 37.0 32.0 37.0 6 34.78349036762425 37.0 35.0 37.0 32.0 37.0 7 34.66424780984397 37.0 35.0 37.0 32.0 37.0 8 34.60567088167651 37.0 35.0 37.0 32.0 37.0 9 36.20725529070905 39.0 37.0 39.0 32.0 39.0 10-11 36.09960684455542 39.0 37.0 39.0 32.0 39.0 12-13 36.02327982705741 39.0 37.0 39.0 31.0 39.0 14-15 37.27042992157435 40.0 38.0 41.0 31.0 41.0 16-17 37.23224005989272 40.0 38.0 41.0 31.0 41.0 18-19 37.1909360056498 40.0 38.0 41.0 31.0 41.0 20-21 37.13101617244955 40.0 38.0 41.0 31.0 41.0 22-23 37.038053634700866 40.0 38.0 41.0 31.0 41.0 24-25 36.946544297006476 40.0 37.0 41.0 30.5 41.0 26-27 36.81389744213216 40.0 37.0 41.0 30.0 41.0 28-29 36.68961398089589 40.0 37.0 41.0 30.0 41.0 30-31 36.524194854762506 40.0 37.0 41.0 30.0 41.0 32-33 36.45467160878171 40.0 37.0 41.0 30.0 41.0 34-35 36.569147400960965 40.0 37.0 41.0 30.0 41.0 36-37 36.54718892510008 40.0 37.0 41.0 30.0 41.0 38-39 36.42410692184613 40.0 37.0 41.0 30.0 41.0 40-41 36.32717005875778 40.0 37.0 41.0 29.0 41.0 42-43 36.18564234978576 40.0 36.0 41.0 28.5 41.0 44-45 36.039997016140795 40.0 36.0 41.0 28.0 41.0 46-47 35.86306460526674 40.0 36.0 41.0 27.5 41.0 48-49 35.70151220368106 40.0 35.0 41.0 27.0 41.0 50-51 35.52948160666337 39.5 35.0 41.0 26.5 41.0 52-53 35.33570588308593 39.0 35.0 41.0 26.0 41.0 54-55 35.110491195089494 39.0 35.0 41.0 26.0 41.0 56-57 34.87634092645797 39.0 35.0 41.0 25.5 41.0 58-59 34.623590875856976 38.0 35.0 40.5 25.0 41.0 60-61 34.336052765138284 38.0 34.0 40.0 24.0 41.0 62-63 34.02123372811654 37.0 34.0 40.0 23.0 41.0 64-65 33.67734041825893 37.0 34.0 40.0 22.5 41.0 66-67 33.32195302004608 36.0 34.0 39.0 22.0 41.0 68-69 32.95712504155007 36.0 33.0 39.0 21.5 41.0 70-71 32.55190854168428 35.0 33.0 38.5 20.0 40.0 72-73 32.19089441348139 35.0 33.0 37.0 19.5 39.5 74-75 31.793904069936808 35.0 33.0 37.0 17.5 39.0 76-77 29.10216939361986 33.0 28.5 34.5 9.0 36.5 78-79 30.662706205383138 34.5 31.5 35.5 10.5 37.0 80-81 30.848081152887758 35.0 32.0 35.5 10.5 37.0 82-83 30.67382815328415 35.0 32.0 35.0 7.0 37.0 84-85 30.476055876973398 35.0 32.0 35.0 4.5 36.0 86-87 30.26885177662547 35.0 32.0 35.0 2.0 36.0 88-89 29.991811226113548 35.0 31.0 35.0 2.0 36.0 90-91 29.792869990964228 34.5 31.0 35.0 2.0 35.0 92-93 29.632836629667036 34.0 31.0 35.0 2.0 35.0 94-95 29.52007049451573 34.0 31.0 35.0 2.0 35.0 96-97 29.311100158319665 34.0 31.0 35.0 2.0 35.0 98-99 29.096215314741578 34.0 31.0 35.0 2.0 35.0 100-101 27.952342110571855 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 56003.0 3 19668.0 4 10905.0 5 7619.0 6 6672.0 7 6675.0 8 7292.0 9 7792.0 10 8496.0 11 9430.0 12 9787.0 13 10962.0 14 11583.0 15 12638.0 16 13725.0 17 14807.0 18 13751.0 19 12648.0 20 11984.0 21 11803.0 22 12390.0 23 13579.0 24 15917.0 25 19093.0 26 22454.0 27 26859.0 28 32148.0 29 38783.0 30 47197.0 31 57998.0 32 73730.0 33 97141.0 34 137518.0 35 208768.0 36 370256.0 37 706820.0 38 729144.0 39 95269.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.27248469670361 18.863922946814764 12.32299080351667 26.540601552964954 2 15.874600874346607 20.6859320183895 36.44528699159365 26.99418011567024 3 18.02445209463558 23.786682941566976 29.409775516177394 28.77908944762005 4 13.061293499362101 15.994313474277261 35.00857491974064 35.93581810662 5 13.938164889137422 37.2182958626126 34.60677639513027 14.236762853119716 6 34.59883936903868 35.30659456757892 16.098896454218863 13.995669609163535 7 29.176249423687462 31.751663434152526 20.753448024439354 18.318639117720657 8 27.15402809205778 34.4045702215566 19.69441375080869 18.746987935576932 9 26.744581565805902 14.61727783039011 18.94619891233917 39.69194169146481 10-11 25.73347599449639 24.88980739226749 28.090434508367363 21.28628210486876 12-13 26.131997170375428 22.525067789580604 27.54943633993012 23.79349870011385 14-15 23.150222874858333 24.267897768893842 24.602235316108455 27.979644040139366 16-17 23.51810194191678 27.38019643294053 25.717267168433324 23.384434456709364 18-19 23.597470885853415 26.515267603622583 27.000927166725997 22.886334343798 20-21 23.96167516810348 25.813625559138142 26.927793131180323 23.296906141578056 22-23 23.78922166739804 25.772006214240417 26.696952051807337 23.741820066554205 24-25 23.595873427760992 26.00653185902029 26.692974841649992 23.70461987156873 26-27 23.405662666569444 26.09689179260745 26.723015930617457 23.774429610205644 28-29 23.592853798924267 26.404754928211293 26.492474226456906 23.509917046407534 30-31 23.72023101761061 26.08487397845174 26.331776912925115 23.86311809101253 32-33 23.453071979432284 26.232866480774437 26.183926199537915 24.130135340255368 34-35 23.98187393397876 26.21888497883451 26.28171792101271 23.51752316617402 36-37 24.051808916940033 25.86043958264571 26.32848126418742 23.759270236226836 38-39 23.764097977004077 25.98707308670132 26.385212855920347 23.863616080374257 40-41 23.900131180336757 25.878192574081528 26.52518611947009 23.696490126111623 42-43 23.795133244999565 25.913257542331834 26.215493078238705 24.076116134429892 44-45 23.6663989074075 25.9353639252497 26.51485221878121 23.883384948561595 46-47 23.856256972656663 26.061338329088347 26.144862862315026 23.937541835939964 48-49 23.50657195741418 26.169894980374814 26.14414571289853 24.179387349312474 50-51 23.681874272535243 26.16295008514032 26.209410160796654 23.945765481527783 52-53 23.973020032062074 25.864783580983687 26.218106316767926 23.94409007018631 54-55 23.21119714480621 25.92786809715998 26.527190706003378 24.333744052030433 56-57 23.345903989243823 26.06637265904232 26.311650327171616 24.27607302454225 58-59 23.282532290489698 25.84985631736255 26.393143922290957 24.47446746985679 60-61 23.088809590768935 25.967437998992963 26.573058211144435 24.370694199093666 62-63 23.324302998200388 25.877847102980343 26.49798438540808 24.299865513411184 64-65 23.002026518246243 25.816781188250577 26.35166071738409 24.82953157611909 66-67 22.985490768675536 25.978152414155876 26.265257068182972 24.771099748985613 68-69 23.32072717666792 25.687969993213972 26.259660995019313 24.731641835098802 70-71 23.083808311239967 25.575373964010083 26.219993657600043 25.120824067149904 72-73 23.01853230604414 25.770702718363523 26.142106841220485 25.06865813437185 74-75 22.962986917942423 25.927415626211143 26.018672869060005 25.09092458678643 76-77 23.01920915701911 25.535678090719255 26.254888614769982 25.19022413749165 78-79 22.902424740356864 25.621639385704352 26.203374834102256 25.27256103983653 80-81 22.994220975850833 25.68099456437764 26.008422611339775 25.31636184843175 82-83 22.851274581405313 25.681488049199192 26.103737774986996 25.363499594408495 84-85 22.708020007267958 25.61087316066684 26.198661206544937 25.482445625520267 86-87 22.75298671927038 25.73779350527045 25.959540592607294 25.549679182851875 88-89 22.5835630592312 25.512756141631737 25.96807025348127 25.935610545655795 90-91 22.421209378553534 25.394926331366392 26.072425440053532 26.11143885002654 92-93 22.480542968891495 25.25529798172526 26.299065877181675 25.96509317220157 94-95 22.286284271470176 24.96857103064958 26.47141887839881 26.27372581948143 96-97 22.28595632308187 24.736926313094823 26.46305212970027 26.514065234123034 98-99 22.1851724685492 24.8668490565307 26.300462351064507 26.647516123855592 100-101 22.01406256419859 24.70824793166879 26.407165724469927 26.870523779662697 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 60.5 2 101.0 3 155.5 4 137.0 5 150.0 6 254.5 7 428.0 8 621.5 9 715.0 10 628.5 11 504.0 12 500.5 13 562.0 14 592.0 15 646.0 16 740.5 17 803.0 18 916.0 19 1044.0 20 1132.5 21 1350.0 22 1650.0 23 1968.0 24 2410.5 25 3120.0 26 4232.5 27 5819.5 28 8260.0 29 11672.0 30 16149.0 31 22249.5 32 31960.0 33 36839.0 34 37740.5 35 42645.0 36 49488.0 37 56933.5 38 63921.5 39 70930.5 40 77280.5 41 83462.0 42 90165.5 43 96897.0 44 103066.5 45 111769.5 46 118163.0 47 121306.5 48 125384.5 49 126941.5 50 126847.5 51 127099.0 52 126922.5 53 128281.0 54 128022.0 55 121232.0 56 111395.0 57 100534.0 58 91702.5 59 80800.0 60 65926.0 61 53958.5 62 44575.0 63 33992.5 64 23868.0 65 17248.5 66 13032.0 67 10252.5 68 7845.0 69 5895.0 70 4442.0 71 3177.5 72 2250.0 73 1628.5 74 1235.0 75 929.0 76 666.0 77 418.0 78 235.5 79 132.0 80 88.0 81 52.5 82 28.5 83 20.5 84 20.0 85 14.0 86 10.5 87 7.0 88 3.0 89 4.5 90 6.0 91 5.0 92 1.5 93 0.5 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16552672692535536 2 2.0206721496482852E-4 3 0.010776918131457522 4 0.00623040579474888 5 0.025898281384658852 6 0.0020880278879698948 7 0.0 8 0.0 9 3.367786916080475E-5 10-11 0.048411936918656834 12-13 3.536176261884499E-4 14-15 0.005186391850763932 16-17 1.6838934580402377E-5 18-19 0.0016165377197186281 20-21 2.3574508412563326E-4 22-23 0.0 24-25 5.556848411532784E-4 26-27 0.003014169289892025 28-29 0.00602833857978405 30-31 0.017882948524387324 32-33 0.012949140692329426 34-35 0.010945307477261546 36-37 0.004344445121743813 38-39 0.0 40-41 0.003839277084331742 42-43 0.008991991065934868 44-45 0.007543842692020264 46-47 0.0040918611030377776 48-49 0.00985077672953539 50-51 0.0031320418319548417 52-53 0.002323772972095528 54-55 0.004159216841359387 56-57 0.007577520561181069 58-59 0.014801423496173688 60-61 0.006870285308804169 62-63 0.020594016991832106 64-65 0.03920103970317673 66-67 0.058936271031408326 68-69 0.04873187667568448 70-71 0.0666148252000718 72-73 0.03297063390842785 74-75 0.026184543272525698 76-77 0.22515339427456016 78-79 0.08407680035994906 80-81 0.06531822723738082 82-83 0.027110684674447827 84-85 0.05009583037669707 86-87 0.06616017396640093 88-89 0.2935194686709938 90-91 0.2959779531197326 92-93 0.05225121400298857 94-95 0.010524334112751485 96-97 0.015626531290613404 98-99 9.598192710829355E-4 100-101 2.3574508412563326E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2969309.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.46330546362471 #Duplication Level Percentage of deduplicated Percentage of total 1 77.87523464042187 44.74968396194009 2 12.126483979484567 13.936557062257457 3 3.991015872325087 6.880108925447733 4 1.8600511288099137 4.275387447710561 5 1.057188923004248 3.037478500767676 6 0.6721922341676823 2.317583260935232 7 0.45992654397629346 1.8500229641137278 8 0.31560093753456775 1.4508378462524163 9 0.23914326240791875 1.2367766103582594 >10 1.3158014240054723 13.335885952775229 >50 0.0625368117558974 2.427040625462655 >100 0.021178031847756486 2.1268454540501933 >500 0.0021759641868720936 0.8503266323969525 >1k 0.0014702460718297014 1.5254647555318055 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA 3015 0.10153877551982633 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.367786916080475E-5 2 0.0 0.0 0.0 0.0 3.367786916080475E-5 3 0.0 0.0 0.0 0.0 3.367786916080475E-5 4 0.0 0.0 0.0 3.367786916080475E-5 3.367786916080475E-5 5 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 6 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 7 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 8 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 9 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 10-11 0.0 3.367786916080475E-5 0.0 3.367786916080475E-5 3.367786916080475E-5 12-13 0.0 3.367786916080475E-5 0.0 5.051680374120713E-5 1.34711476643219E-4 14-15 0.0 3.367786916080475E-5 0.0 6.73557383216095E-5 2.189061495452309E-4 16-17 0.0 3.367786916080475E-5 0.0 6.73557383216095E-5 2.5258401870603567E-4 18-19 0.0 3.367786916080475E-5 0.0 1.0103360748241426E-4 2.69422953286438E-4 20-21 0.0 3.367786916080475E-5 0.0 1.1787254206281663E-4 3.536176261884499E-4 22-23 0.0 3.367786916080475E-5 0.0 1.8522828038442614E-4 4.0413442992965704E-4 24-25 0.0 3.367786916080475E-5 0.0 5.220069719924737E-4 4.378122990904618E-4 26-27 0.0 3.367786916080475E-5 0.0 0.0013134368972713855 5.051680374120713E-4 28-29 0.0 3.367786916080475E-5 0.0 0.00857101770142481 5.051680374120713E-4 30-31 0.0 3.367786916080475E-5 0.0 0.036574165908633965 5.051680374120713E-4 32-33 0.0 3.367786916080475E-5 0.0 0.0935234426595548 5.051680374120713E-4 34-35 0.0 3.367786916080475E-5 0.0 0.17163926017804143 5.725237757336808E-4 36-37 0.0 3.367786916080475E-5 0.0 0.29084207807270984 5.725237757336808E-4 38-39 0.0 3.367786916080475E-5 0.0 0.4749084719710882 6.567184486356927E-4 40-41 0.0 3.367786916080475E-5 0.0 0.6739446787114443 6.73557383216095E-4 42-43 0.0 3.367786916080475E-5 0.0 0.880373177732597 6.73557383216095E-4 44-45 0.0 3.367786916080475E-5 0.0 1.1406357506072962 6.903963177964975E-4 46-47 0.0 3.367786916080475E-5 0.0 1.4434334722320916 7.072352523768998E-4 48-49 0.0 5.051680374120713E-5 0.0 1.74466517294091 8.082688598593141E-4 50-51 0.0 6.73557383216095E-5 0.0 2.0558823618559066 8.082688598593141E-4 52-53 0.0 6.73557383216095E-5 0.0 2.367133228640064 9.261414019221307E-4 54-55 0.0 6.73557383216095E-5 0.0 2.727149649969067 9.9349714024374E-4 56-57 0.0 6.73557383216095E-5 0.0 3.141774736142315 0.0010103360748241427 58-59 0.0 6.73557383216095E-5 0.0 3.5609800125214317 0.0010103360748241427 60-61 0.0 6.73557383216095E-5 0.0 3.9912484689198733 0.0010103360748241427 62-63 0.0 6.73557383216095E-5 0.0 4.428521922103762 0.0010440139439849474 64-65 0.0 6.73557383216095E-5 0.0 4.909088276093866 0.001077691813145752 66-67 0.0 6.73557383216095E-5 0.0 5.4660865541444155 0.001077691813145752 68-69 0.0 6.73557383216095E-5 0.0 6.0509027521217895 0.001077691813145752 70-71 0.0 8.419467290201189E-5 0.0 6.647001036268034 0.0011113696823065568 72-73 0.0 1.0103360748241426E-4 0.0 7.251468270900737 0.0013302758318517877 74-75 0.0 1.0103360748241426E-4 0.0 7.885369963179985 0.00134711476643219 76-77 0.0 1.0103360748241426E-4 0.0 8.604022013202398 0.00134711476643219 78-79 0.0 1.0103360748241426E-4 0.0 9.378983460461676 0.0013639537010125924 80-81 0.0 1.0103360748241426E-4 0.0 10.16751708899276 0.0013976315701733973 82-83 0.0 1.0103360748241426E-4 0.0 10.980652400945809 0.001481826243075409 84-85 0.0 1.0103360748241426E-4 0.0 11.814044951199083 0.0015491819813970185 86-87 0.0 1.34711476643219E-4 0.0 12.720131182035956 0.0015828598505578234 88-89 0.0 1.34711476643219E-4 0.0 13.677121512109384 0.0015828598505578234 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2220 0.0 48.60205 1 GTATCAA 3880 0.0 40.30379 1 TCAACGC 4880 0.0 31.702875 4 CAACGCA 5085 0.0 30.540747 5 ATCAACG 5140 0.0 30.00791 3 TATCAAC 5190 0.0 29.627373 2 AACGCAG 5380 0.0 28.772503 6 GTACATG 6975 0.0 28.621132 1 TACATGG 7450 0.0 26.50041 2 ACATGGG 7835 0.0 24.10791 3 ACGCAGA 6415 0.0 23.90787 7 CGCAGAG 6785 0.0 22.324198 8 CATGGGG 6430 0.0 21.846489 4 GAGTACA 5445 0.0 20.950533 1 AGAGTAC 6385 0.0 18.889587 10-11 GCAGAGT 7715 0.0 18.587486 9 TAAGGTG 1535 0.0 18.563751 5 ATGGGGG 3535 0.0 18.137074 5 GGTAAGG 1230 0.0 17.362926 3 TATACTG 1175 0.0 16.975958 5 >>END_MODULE