##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921656_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3037888 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98734515558177 33.0 31.0 34.0 28.0 34.0 2 31.122794520403648 33.0 31.0 34.0 28.0 34.0 3 31.198327588113848 34.0 31.0 34.0 28.0 34.0 4 34.67008691564666 37.0 35.0 37.0 32.0 37.0 5 34.37532555512251 37.0 35.0 37.0 31.0 37.0 6 34.34496762224282 37.0 35.0 37.0 31.0 37.0 7 34.2062416389281 37.0 35.0 37.0 30.0 37.0 8 34.14656333610719 37.0 35.0 37.0 30.0 37.0 9 35.70265296153117 39.0 37.0 39.0 30.0 39.0 10-11 35.573938538879645 39.0 37.0 39.0 30.0 39.0 12-13 35.482490467061325 39.0 37.0 39.0 30.0 39.0 14-15 36.69219240472328 40.0 37.0 41.0 30.0 41.0 16-17 36.64573117902964 40.0 37.0 41.0 30.0 41.0 18-19 36.59005615085218 40.0 37.0 41.0 30.0 41.0 20-21 36.52581645537953 40.0 37.0 41.0 29.0 41.0 22-23 36.43098856837382 40.0 37.0 41.0 29.0 41.0 24-25 36.34275374865696 40.0 37.0 41.0 28.5 41.0 26-27 36.20895618929993 40.0 37.0 41.0 28.0 41.0 28-29 36.08685655955716 40.0 36.5 41.0 27.0 41.0 30-31 35.930081359154784 40.0 36.0 41.0 27.0 41.0 32-33 35.884696703762614 40.0 36.0 41.0 27.0 41.0 34-35 36.0220859031011 40.0 37.0 41.0 27.5 41.0 36-37 36.0203080232056 40.0 36.5 41.0 27.0 41.0 38-39 35.90863043667179 40.0 36.0 41.0 27.0 41.0 40-41 35.82925670729138 40.0 36.0 41.0 27.0 41.0 42-43 35.699227555459586 40.0 36.0 41.0 26.0 41.0 44-45 35.570134580340024 40.0 35.5 41.0 26.0 41.0 46-47 35.41936667842923 40.0 35.0 41.0 25.0 41.0 48-49 35.27341923072872 40.0 35.0 41.0 24.5 41.0 50-51 35.111266939400004 39.0 35.0 41.0 24.0 41.0 52-53 34.938583482998716 39.0 35.0 41.0 24.0 41.0 54-55 34.71730162533971 39.0 35.0 41.0 23.0 41.0 56-57 34.49177767580635 39.0 34.5 40.5 23.0 41.0 58-59 34.24646020524786 38.0 34.0 40.0 22.0 41.0 60-61 33.961757971327444 38.0 34.0 40.0 22.0 41.0 62-63 33.657610484652494 37.0 34.0 40.0 20.5 41.0 64-65 33.3172809530832 37.0 34.0 40.0 20.0 41.0 66-67 32.96358621516001 36.0 33.0 39.0 18.5 41.0 68-69 32.60289434633535 36.0 33.0 39.0 17.5 40.5 70-71 32.21081636321023 35.0 33.0 38.5 13.0 40.0 72-73 31.854811961467966 35.0 32.0 37.0 11.0 39.5 74-75 31.460219896191038 35.0 32.0 37.0 7.5 39.0 76-77 28.8032613447237 32.0 28.0 34.5 4.0 36.5 78-79 30.348498364653338 34.5 31.0 35.5 2.0 37.0 80-81 30.532016815629806 35.0 31.0 35.5 2.0 37.0 82-83 30.360993558682875 35.0 31.0 35.0 2.0 37.0 84-85 30.161338732698507 35.0 31.0 35.0 2.0 36.0 86-87 29.951528989877175 35.0 31.0 35.0 2.0 36.0 88-89 29.68463353487686 34.0 31.0 35.0 2.0 36.0 90-91 29.481714105325807 34.0 31.0 35.0 2.0 35.0 92-93 29.314204638222343 34.0 31.0 35.0 2.0 35.0 94-95 29.201385469115387 34.0 31.0 35.0 2.0 35.0 96-97 28.98717464238313 34.0 30.5 35.0 2.0 35.0 98-99 28.763964635957613 34.0 30.0 35.0 2.0 35.0 100-101 27.643644038226554 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83419.0 3 26165.0 4 13669.0 5 9214.0 6 7754.0 7 7641.0 8 7762.0 9 8479.0 10 9029.0 11 9642.0 12 10299.0 13 10801.0 14 11381.0 15 12167.0 16 12858.0 17 13341.0 18 12533.0 19 11875.0 20 11433.0 21 11334.0 22 12283.0 23 13778.0 24 16043.0 25 19278.0 26 23219.0 27 27423.0 28 33109.0 29 40716.0 30 49223.0 31 60885.0 32 77444.0 33 101783.0 34 143361.0 35 217136.0 36 386048.0 37 728301.0 38 707717.0 39 79345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.52784984640866 19.07793104312228 12.08189296802834 27.312326142440728 2 15.49091407045167 20.615369118768196 36.11062831892199 27.783088491858148 3 18.016629428168766 23.711107387444212 28.739934165715542 29.532329018671483 4 12.831445457229886 15.865631986126424 34.45416409757723 36.84875845906646 5 13.850444697818507 37.18340817672413 34.73766071793683 14.228486407520535 6 35.32924138003681 35.35649766017344 15.672821933536813 13.641439026252932 7 29.80952556512946 31.20075526155013 20.31684512398087 18.67287404933954 8 27.410227105146735 35.16647091663682 18.838910453578276 18.584391524638168 9 26.463986316805073 14.602880225630512 18.32309760040449 40.61003585715993 10-11 26.077989491800718 24.955837109079376 27.635991076527276 21.330182322592627 12-13 26.222523163380217 22.16737214837862 27.501903467454408 24.108201220786754 14-15 23.105300659749364 23.957561276137607 24.248550199004555 28.688587865108474 16-17 23.878369426122593 27.259024568882158 25.11172648756743 23.750879517427816 18-19 23.862541464398966 26.550711737622073 26.299530555686314 23.28721624229265 20-21 24.17663771335198 25.765641093670943 26.3558884340028 23.70183275897427 22-23 24.02139249373249 25.660195504245053 26.093605162533972 24.224806839488487 24-25 23.852963521833704 25.88856607520001 26.192693438038205 24.06577696492808 26-27 23.747727184071795 26.072085236502062 26.095210475058238 24.084977104367905 28-29 23.91267492223575 26.154003661314274 25.984797085433193 23.94852433101678 30-31 23.9644705957108 25.987535604386885 25.910363615382575 24.13763018451974 32-33 23.738767582159817 26.07965366540193 25.851787228088657 24.329791524349595 34-35 24.062074138623224 26.04036715248436 25.994755387776543 23.902803321115876 36-37 24.171075728884027 25.796359344948733 26.031547735145182 24.001017191022058 38-39 23.97468635688451 25.984849669383742 26.00050199357284 24.03996198015891 40-41 24.07724982104533 25.83759754860498 26.083879332295407 24.001273298054286 42-43 23.945785809802285 25.860707304210074 25.9741679170982 24.21933896888944 44-45 23.94820770642782 25.865695835495078 26.079050009349263 24.107046448727843 46-47 24.08573528796956 25.85394083618603 25.949175200615976 24.111148675228435 48-49 23.826514840513735 26.05092117222923 25.918382194873118 24.204181792383913 50-51 23.88406476464296 26.121111679687882 25.921197235038058 24.0736263206311 52-53 24.203048495865133 25.889237895784685 25.86573424547686 24.041979362873317 54-55 23.655465857125858 25.885785023659615 26.183486809327167 24.275262309887363 56-57 23.734161119770008 26.013761581902116 26.03858332377279 24.21349397455508 58-59 23.710380872034403 25.887100557624642 26.086808370542602 24.31571019979835 60-61 23.609615537186926 26.0264703142247 26.15079269715871 24.213121451429668 62-63 23.729365189637107 25.906288707246294 26.118637360061264 24.24570874305533 64-65 23.48353099129532 25.826381303301048 26.103677646664426 24.586410058739204 66-67 23.504287439255513 25.915753811331594 26.034937178820833 24.54502157059206 68-69 23.723408477176662 25.742476270646936 26.03241067107455 24.501704581101848 70-71 23.564191901682463 25.686131933847793 26.046900772511407 24.702775391958337 72-73 23.565869214351938 25.902676100188334 25.895168445591153 24.636286239868575 74-75 23.472855623298212 25.982860758189112 25.867667325581223 24.67661629293145 76-77 23.57300923638048 25.77206811393493 25.94778631031045 24.707136339374138 78-79 23.51184951145978 25.82039292414346 25.933079123633778 24.734678440762988 80-81 23.57506019990932 25.91101925557157 25.7939050895995 24.72001545491961 82-83 23.516911307971462 25.929190529476564 25.841655374242013 24.712242788309965 84-85 23.43138917751983 25.877224905437917 25.82339409129008 24.867991825752174 86-87 23.425537206280296 26.000932195154892 25.7370023831915 24.836528215373317 88-89 23.30849753897855 25.86913175955606 25.719935429135454 25.10243527232993 90-91 23.25336288709042 25.880600114259998 25.770301742473272 25.095735256176305 92-93 23.325903976037235 25.741512707165036 25.896878764251152 25.035704552546576 94-95 23.19896115627823 25.54493535703093 25.999832763147847 25.256270723543 96-97 23.182972183771703 25.417343837527063 26.037814241436124 25.361869737265113 98-99 23.086598403745793 25.518506107255696 25.884717607317253 25.510177881681262 100-101 23.05611277857402 25.457670837774476 25.880333732514956 25.605882651136547 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 23.0 2 39.0 3 59.0 4 50.0 5 48.5 6 110.0 7 238.0 8 347.5 9 355.0 10 289.0 11 251.0 12 263.5 13 283.5 14 318.5 15 346.5 16 388.0 17 473.0 18 506.5 19 550.5 20 647.5 21 791.5 22 1006.0 23 1247.0 24 1515.5 25 1959.0 26 2746.0 27 3966.5 28 5830.0 29 8521.5 30 12214.5 31 17323.0 32 25443.5 33 31206.0 34 34903.0 35 41060.5 36 48998.0 37 57315.0 38 65241.0 39 73271.0 40 80805.0 41 88222.5 42 95316.0 43 103127.5 44 110349.5 45 118144.0 46 124050.5 47 128215.5 48 132311.0 49 133929.5 50 134270.5 51 134664.5 52 134648.5 53 133863.0 54 131097.0 55 123911.5 56 113884.0 57 102748.5 58 92821.0 59 81411.0 60 67613.0 61 56076.5 62 46048.5 63 34816.0 64 24713.5 65 18049.0 66 13425.5 67 10246.5 68 7803.0 69 5847.5 70 4490.5 71 3297.5 72 2271.5 73 1639.0 74 1223.5 75 891.5 76 605.5 77 354.5 78 195.5 79 109.5 80 70.0 81 50.0 82 31.5 83 18.5 84 11.5 85 11.5 86 9.5 87 4.5 88 4.0 89 3.0 90 1.5 91 2.0 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14859007310341923 2 1.3167042366275518E-4 3 0.008591495143994776 4 0.0056289106115827835 5 0.021626867086607538 6 0.0018433859312785724 7 0.0 8 0.0 9 3.2917605915688795E-5 10-11 0.04615048349379569 12-13 3.620936650725768E-4 14-15 0.004723676448901342 16-17 1.6458802957844397E-5 18-19 0.0013496218425432405 20-21 2.962584532411991E-4 22-23 0.0 24-25 5.266816946510207E-4 26-27 0.0026827848821286368 28-29 0.005958086670739672 30-31 0.01700194345545326 32-33 0.011949090947395033 34-35 0.00969423494217035 36-37 0.0036373954536836122 38-39 1.6458802957844397E-5 40-41 0.0035386426359365454 42-43 0.008887753597235974 44-45 0.0071102028777887795 46-47 0.003917195103966967 48-49 0.009579023321465438 50-51 0.0029132081235384586 52-53 0.002040891566772705 54-55 0.0038349010891777446 56-57 0.007521672951734889 58-59 0.014829381465017801 60-61 0.0072747909073672245 62-63 0.021923125539848737 64-65 0.040982419365032545 66-67 0.05958086670739672 68-69 0.04975496134156361 70-71 0.06618084669349232 72-73 0.03250613584174268 74-75 0.027074730865654033 76-77 0.2177170455263657 78-79 0.08122419259696209 80-81 0.06456788400362357 82-83 0.027074730865654033 84-85 0.050133513809594035 86-87 0.06725066888575221 88-89 0.2850006320180336 90-91 0.2907118366444056 92-93 0.04972204373564792 94-95 0.009216929656392862 96-97 0.014302699770366783 98-99 8.558577538079086E-4 100-101 1.975056354941328E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3037888.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.59827848812898 #Duplication Level Percentage of deduplicated Percentage of total 1 78.37419993875415 46.709673942341716 2 11.94628777195245 14.239563710643042 3 3.9804528922262867 7.116844199393421 4 1.8061425289971147 4.305719417296945 5 1.0168044025915874 3.0299895976804527 6 0.6165737962638769 2.2048042090930458 7 0.41293589519509516 1.7227187935707484 8 0.3174767601283894 1.513685469091254 9 0.23331533822434106 1.2514673252741657 >10 1.2175935227731487 12.760645477087266 >50 0.06002523121009951 2.420409744168183 >100 0.016419319718570583 1.6375991743018106 >500 9.970886057436843E-4 0.427759262291241 >1k 7.755133591634909E-4 0.659119677766806 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.2917605915688795E-5 2 0.0 0.0 0.0 3.2917605915688795E-5 3.2917605915688795E-5 3 0.0 0.0 0.0 6.583521183137759E-5 3.2917605915688795E-5 4 0.0 0.0 0.0 6.583521183137759E-5 3.2917605915688795E-5 5 0.0 0.0 0.0 6.583521183137759E-5 6.583521183137759E-5 6 0.0 0.0 0.0 6.583521183137759E-5 1.6458802957844396E-4 7 0.0 0.0 0.0 6.583521183137759E-5 1.6458802957844396E-4 8 0.0 0.0 0.0 6.583521183137759E-5 1.9750563549413277E-4 9 0.0 0.0 0.0 6.583521183137759E-5 2.3042324140982155E-4 10-11 0.0 0.0 0.0 9.875281774706638E-5 2.3042324140982155E-4 12-13 0.0 0.0 0.0 9.875281774706638E-5 3.4563486211473235E-4 14-15 0.0 0.0 0.0 9.875281774706638E-5 4.7730528577748753E-4 16-17 0.0 0.0 0.0 9.875281774706638E-5 5.266816946510207E-4 18-19 0.0 0.0 0.0 9.875281774706638E-5 5.266816946510207E-4 20-21 0.0 0.0 0.0 1.4812922662059956E-4 6.58352118313776E-4 22-23 0.0 0.0 0.0 1.6458802957844396E-4 7.571049360608423E-4 24-25 1.6458802957844397E-5 0.0 0.0 2.797996502833548E-4 8.558577538079087E-4 26-27 3.2917605915688795E-5 0.0 0.0 6.58352118313776E-4 8.558577538079087E-4 28-29 3.2917605915688795E-5 0.0 0.0 0.004295747571997388 8.558577538079087E-4 30-31 3.2917605915688795E-5 1.6458802957844397E-5 0.0 0.017578001558977815 8.72316556765753E-4 32-33 1.1521162070491077E-4 3.2917605915688795E-5 0.0 0.04481732045421029 9.216929656392862E-4 34-35 1.3167042366275518E-4 3.2917605915688795E-5 0.0 0.07801472602018245 9.87528177470664E-4 36-37 1.3167042366275518E-4 3.2917605915688795E-5 0.0 0.13402403248572692 9.87528177470664E-4 38-39 1.3167042366275518E-4 6.583521183137759E-5 0.0 0.22853047906966945 0.0010039869804285082 40-41 1.3167042366275518E-4 1.1521162070491077E-4 0.0 0.3297356584574547 0.0010204457833863526 42-43 1.3167042366275518E-4 1.6458802957844396E-4 0.0 0.4371787241662629 0.001036904586344197 44-45 1.3167042366275518E-4 1.6458802957844396E-4 0.0 0.564948411528009 0.0010533633893020414 46-47 1.3167042366275518E-4 1.6458802957844396E-4 0.0 0.7178671498093412 0.0010698221922598858 48-49 1.3167042366275518E-4 1.8104683253628836E-4 0.0 0.8772706564560642 0.0010862809952177303 50-51 1.3167042366275518E-4 1.9750563549413277E-4 0.0 1.052046685065414 0.0010862809952177303 52-53 1.3167042366275518E-4 1.9750563549413277E-4 0.0 1.224337434428129 0.0012673278277540185 54-55 1.3167042366275518E-4 2.3042324140982155E-4 0.0 1.421711399498599 0.001398998251416774 56-57 1.3167042366275518E-4 2.3042324140982155E-4 0.0 1.6465880243116269 0.0014154570543746183 58-59 1.3167042366275518E-4 2.3042324140982155E-4 0.0 1.8833972812690922 0.001448374660290307 60-61 1.3167042366275518E-4 2.3042324140982155E-4 0.0 2.1403850306528747 0.0014812922662059958 62-63 1.3167042366275518E-4 2.3042324140982155E-4 0.0 2.4031333610719026 0.0015142098721216846 64-65 1.3167042366275518E-4 2.3042324140982155E-4 0.0 2.684480138833295 0.0015142098721216846 66-67 1.3167042366275518E-4 2.6334084732551036E-4 0.0 3.0071549708218344 0.0015471274780373733 68-69 1.3167042366275518E-4 2.6334084732551036E-4 0.0 3.3643274538100156 0.0015800450839530621 70-71 1.3167042366275518E-4 2.6334084732551036E-4 0.0 3.7380739513767463 0.001612962689868751 72-73 1.3167042366275518E-4 2.6334084732551036E-4 0.0 4.130122637832599 0.0018104683253628837 74-75 1.3167042366275518E-4 2.6334084732551036E-4 0.0 4.525364332062275 0.0018433859312785724 76-77 1.3167042366275518E-4 2.6334084732551036E-4 0.0 4.959860271346409 0.0018433859312785724 78-79 1.3167042366275518E-4 2.6334084732551036E-4 0.0 5.448489213558894 0.0018763035371942613 80-81 1.3167042366275518E-4 2.6334084732551036E-4 0.0 5.964736027134641 0.0018763035371942613 82-83 1.3167042366275518E-4 2.6334084732551036E-4 0.0 6.49493990561864 0.0020079739608570165 84-85 1.3167042366275518E-4 2.6334084732551036E-4 0.0 7.038031026818632 0.0020079739608570165 86-87 1.3167042366275518E-4 2.6334084732551036E-4 0.0 7.623207307181831 0.0020079739608570165 88-89 1.3167042366275518E-4 2.6334084732551036E-4 0.0 8.258566477763498 0.0020079739608570165 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1790 0.0 40.359653 1 GTATCAA 2865 0.0 34.671974 1 GTACATG 6450 0.0 28.664658 1 TCAACGC 3365 0.0 28.349031 4 CAACGCA 3415 0.0 27.813765 5 ATCAACG 3560 0.0 26.796646 3 TACATGG 7055 0.0 26.236263 2 ACATGGG 6960 0.0 25.844275 3 AACGCAG 3725 0.0 25.75193 6 TATCAAC 3810 0.0 25.038336 2 CATGGGG 5635 0.0 23.666803 4 ACGCAGA 4670 0.0 19.930761 7 GTATAGG 670 0.0 19.1534 1 CGCAGAG 4960 0.0 18.573969 8 TATACTG 1310 0.0 18.489252 5 GAGTACA 4685 0.0 17.44921 1 GTATAGC 880 0.0 16.7431 1 AGAGTAC 4835 0.0 16.156754 10-11 TTATACT 1225 0.0 15.884554 4 ATGGGGG 3450 0.0 15.417693 5 >>END_MODULE